BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033289
MAPSSPTRGAASSSATLADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQL
LNRRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPSTPRKL
LR

High Scoring Gene Products

Symbol, full name Information P value
AT5G62150 protein from Arabidopsis thaliana 1.8e-25
AT4G25433 protein from Arabidopsis thaliana 3.3e-24
AT3G52790 protein from Arabidopsis thaliana 1.5e-19

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033289
        (122 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2174093 - symbol:AT5G62150 "AT5G62150" species...   289  1.8e-25   1
TAIR|locus:504955292 - symbol:AT4G25433 "AT4G25433" speci...   277  3.3e-24   1
TAIR|locus:2083293 - symbol:AT3G52790 "AT3G52790" species...   233  1.5e-19   1


>TAIR|locus:2174093 [details] [associations]
            symbol:AT5G62150 "AT5G62150" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0016998 "cell wall macromolecule
            catabolic process" evidence=ISS] [GO:0009627 "systemic acquired
            resistance" evidence=RCA] [GO:0034976 "response to endoplasmic
            reticulum stress" evidence=RCA] EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AB016880 HOGENOM:HOG000243548
            ProtClustDB:CLSN2684886 EMBL:BT012512 EMBL:BT014812 IPI:IPI00539355
            RefSeq:NP_201021.1 UniGene:At.29068 ProteinModelPortal:Q9FIS3
            SMR:Q9FIS3 EnsemblPlants:AT5G62150.1 GeneID:836335
            KEGG:ath:AT5G62150 TAIR:At5g62150 eggNOG:NOG257636
            InParanoid:Q9FIS3 OMA:VRENNAS PhylomeDB:Q9FIS3
            Genevestigator:Q9FIS3 Uniprot:Q9FIS3
        Length = 102

 Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
 Identities = 59/98 (60%), Positives = 74/98 (75%)

Query:    23 WYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCDEIYVVGEGETLHTIS 82
             W  A+V+L+LIL+ S+R N+ ++        +R G+Q  + +PC+EIY+VGEGETLHTI 
Sbjct:    14 WCSAVVLLSLILLLSVRENNASNS-------IR-GSQF-STKPCEEIYIVGEGETLHTIG 64

Query:    83 DKCGDPFIVERNPHIHDPDDVFPGLVIKIISPSTPRKL 120
             DKCGDPFIVERNPHIHDPDDVFPGLV+KI      RKL
Sbjct:    65 DKCGDPFIVERNPHIHDPDDVFPGLVLKIAPFYFNRKL 102


>TAIR|locus:504955292 [details] [associations]
            symbol:AT4G25433 "AT4G25433" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0016998 "cell wall
            macromolecule catabolic process" evidence=IEA;ISS]
            InterPro:IPR018392 Pfam:PF01476 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0016998 EMBL:BT012276 EMBL:AK226660
            IPI:IPI00532611 RefSeq:NP_680740.1 UniGene:At.63732
            ProteinModelPortal:Q6NLQ4 SMR:Q6NLQ4 EnsemblPlants:AT4G25433.1
            GeneID:828647 KEGG:ath:AT4G25433 TAIR:At4g25433 eggNOG:NOG249039
            HOGENOM:HOG000243548 InParanoid:Q6NLQ4 OMA:ERPCEEL PhylomeDB:Q6NLQ4
            ProtClustDB:CLSN2684886 Genevestigator:Q6NLQ4 Uniprot:Q6NLQ4
        Length = 110

 Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 53/92 (57%), Positives = 68/92 (73%)

Query:    24 YCAIVILALILIGSIRGNSLADEPHDYD----HVMRPGNQLLNRRPCDEIYVVGEGETLH 79
             YC + +L L L GS++ ++       Y      V R G Q++ R PC+E+YVVGEG+TLH
Sbjct:    15 YCLVALLILTLAGSVKNSNGGGSGEYYRGRNCEVWR-GKQMMER-PCEELYVVGEGDTLH 72

Query:    80 TISDKCGDPFIVERNPHIHDPDDVFPGLVIKI 111
             +IS+KCGDPFIVERNPHIHDPDDVFPGL+IK+
Sbjct:    73 SISEKCGDPFIVERNPHIHDPDDVFPGLLIKL 104


>TAIR|locus:2083293 [details] [associations]
            symbol:AT3G52790 "AT3G52790" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0016998
            "cell wall macromolecule catabolic process" evidence=IEA;ISS]
            InterPro:IPR018392 Pfam:PF01476 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0016998 EMBL:AL353912
            HOGENOM:HOG000243548 ProtClustDB:CLSN2684886 EMBL:BT003129
            EMBL:AK228161 IPI:IPI00528440 PIR:T49032 RefSeq:NP_190847.1
            UniGene:At.35261 ProteinModelPortal:Q9LXI6 SMR:Q9LXI6
            EnsemblPlants:AT3G52790.1 GeneID:824445 KEGG:ath:AT3G52790
            TAIR:At3g52790 eggNOG:NOG278366 InParanoid:Q9LXI6 OMA:CCEVSET
            PhylomeDB:Q9LXI6 Genevestigator:Q9LXI6 Uniprot:Q9LXI6
        Length = 109

 Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 50/98 (51%), Positives = 66/98 (67%)

Query:    23 WYCAIVILALILIGSIRGNSLADEPH-DYDHVMRPGNQLL---NRRP-CDEIYVVGEGET 77
             WYCA+    ++L+ S +   +A E   +     +P   +    +RRP CDEIY V EGET
Sbjct:    15 WYCAVFAAMMLLMNSFQ---VAQEGSTEIVEKQQPSMMITGYSHRRPACDEIYEVKEGET 71

Query:    78 LHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPS 115
             L TIS+KCGDP+IVE NPHIHD DD+FPGL+I+I +PS
Sbjct:    72 LQTISEKCGDPYIVEGNPHIHDHDDLFPGLLIRI-TPS 108


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.144   0.457    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      122       109   0.00091  102 3  11 22  0.45    30
                                                     29  0.41    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  570 (61 KB)
  Total size of DFA:  128 KB (2081 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.76u 0.28s 12.04t   Elapsed:  00:00:00
  Total cpu time:  11.76u 0.28s 12.04t   Elapsed:  00:00:00
  Start:  Mon May 20 22:25:21 2013   End:  Mon May 20 22:25:21 2013

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