BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033289
(122 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224127542|ref|XP_002320100.1| predicted protein [Populus trichocarpa]
gi|222860873|gb|EEE98415.1| predicted protein [Populus trichocarpa]
Length = 120
Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 90/110 (81%), Gaps = 3/110 (2%)
Query: 13 SSATLADAASWYCAIVILALILIGSIRGNS-LADEPHDYDHVMRPGNQLLNRRPCDEIYV 71
+S ++ADAA+WYCA+V+LALIL S+R S D+ H +D V GNQ+L+ RPCDEIYV
Sbjct: 12 TSTSIADAATWYCALVLLALILFTSLREASPTYDDDHHHDFVAVKGNQILD-RPCDEIYV 70
Query: 72 VGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPSTPRKLL 121
V EGETLHTISDKCGDPFIVE NPHIHDPDDV+PGLVIK I+PS RKLL
Sbjct: 71 VKEGETLHTISDKCGDPFIVEENPHIHDPDDVYPGLVIK-ITPSRSRKLL 119
>gi|224134687|ref|XP_002321883.1| predicted protein [Populus trichocarpa]
gi|222868879|gb|EEF06010.1| predicted protein [Populus trichocarpa]
Length = 113
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/119 (67%), Positives = 91/119 (76%), Gaps = 10/119 (8%)
Query: 5 SPTRGAASSSATLADAASWYCAIVILALILIGSIRGNSL-ADEPHDYDHVMRPGNQLLNR 63
S ++ S +AD ASW CAIV+L LIL+GSIR S+ D+P G+QL +R
Sbjct: 4 SSSKKTMKISVVIADVASWNCAIVLLCLILLGSIREYSVPKDQP-------VKGSQLFDR 56
Query: 64 RPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPSTPRKLLR 122
PCDEIYVVGEGETLHTISDKCGDPFIVE+NPHIHDPDDVFPGLVIK I+PS PRKLLR
Sbjct: 57 -PCDEIYVVGEGETLHTISDKCGDPFIVEQNPHIHDPDDVFPGLVIK-ITPSRPRKLLR 113
>gi|357515639|ref|XP_003628108.1| hypothetical protein MTR_8g043660 [Medicago truncatula]
gi|357515653|ref|XP_003628115.1| hypothetical protein MTR_8g043870 [Medicago truncatula]
gi|355522130|gb|AET02584.1| hypothetical protein MTR_8g043660 [Medicago truncatula]
gi|355522137|gb|AET02591.1| hypothetical protein MTR_8g043870 [Medicago truncatula]
Length = 116
Score = 147 bits (372), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 71/111 (63%), Positives = 85/111 (76%), Gaps = 2/111 (1%)
Query: 1 MAPSSPTRGAASSSATLADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQL 60
MA + +GA SS +A+AASWYCAI ++ALIL+ R +S+ P++ DH M N
Sbjct: 1 MATFNSRKGAILSSKAIAEAASWYCAIFLVALILLSIFRDSSMI--PNNNDHNMIESNHF 58
Query: 61 LNRRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI 111
L+ +PCDEIYVVGEGETL+TISDKC DPFIVE NPHIHDPDDVFPGLVIKI
Sbjct: 59 LSSKPCDEIYVVGEGETLNTISDKCNDPFIVENNPHIHDPDDVFPGLVIKI 109
>gi|357444101|ref|XP_003592328.1| hypothetical protein MTR_1g101680 [Medicago truncatula]
gi|355481376|gb|AES62579.1| hypothetical protein MTR_1g101680 [Medicago truncatula]
gi|388493424|gb|AFK34778.1| unknown [Medicago truncatula]
Length = 104
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/105 (64%), Positives = 85/105 (80%), Gaps = 7/105 (6%)
Query: 18 ADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCDEIYVVGEGET 77
D+ASWYCAI +L +IL+GSIR +++A+ + GN L + + CDEIYVVGEGET
Sbjct: 6 GDSASWYCAIALLGMILLGSIRESTVAE-------LQVRGNSLGDHKACDEIYVVGEGET 58
Query: 78 LHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPSTPRKLLR 122
L+TIS+KCGDPFIVERNPHIHDPDDVFPGLVI+II+P+ RKLL+
Sbjct: 59 LNTISEKCGDPFIVERNPHIHDPDDVFPGLVIRIITPTNTRKLLK 103
>gi|255541432|ref|XP_002511780.1| conserved hypothetical protein [Ricinus communis]
gi|223548960|gb|EEF50449.1| conserved hypothetical protein [Ricinus communis]
Length = 114
Score = 144 bits (363), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 73/106 (68%), Positives = 87/106 (82%), Gaps = 7/106 (6%)
Query: 17 LADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCDEIYVVGEGE 76
+AD ASWYCA+V++ LIL S+R S+ D P++ + GNQ+L+R PCDEIYVV EGE
Sbjct: 16 IADVASWYCALVLVTLILQSSLRETSIYD-PYE----VFKGNQILDR-PCDEIYVVQEGE 69
Query: 77 TLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPSTPRKLLR 122
TLHTIS KCGDPFIVE+NPHIHDPDDVFPGLVIK I+PSTP K+LR
Sbjct: 70 TLHTISSKCGDPFIVEKNPHIHDPDDVFPGLVIK-ITPSTPIKMLR 114
>gi|356506314|ref|XP_003521930.1| PREDICTED: uncharacterized protein LOC100813243 [Glycine max]
Length = 114
Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 87/120 (72%), Gaps = 8/120 (6%)
Query: 1 MAPSSPTRGAA-SSSATLADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQ 59
MA + P +G +SS +ADAASWYCA V++AL+L+ +G+S+ P NQ
Sbjct: 2 MASNYPRKGLTLTSSKAIADAASWYCAFVLVALVLLSMFKGSSIMMLPS------HANNQ 55
Query: 60 LLNRRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPSTPRK 119
LL+R PC+EIYVVGEGETLHTISDKCGDPFIVE NPHIHDPDDVFPGLVI++ PR
Sbjct: 56 LLSR-PCEEIYVVGEGETLHTISDKCGDPFIVENNPHIHDPDDVFPGLVIEVTPLLLPRN 114
>gi|225469318|ref|XP_002270367.1| PREDICTED: uncharacterized protein LOC100255607 [Vitis vinifera]
Length = 113
Score = 141 bits (355), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/112 (67%), Positives = 88/112 (78%), Gaps = 7/112 (6%)
Query: 11 ASSSATLADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCDEIY 70
+ SS +ADAAS YCA++++ALIL+ S+R S P D G+QLL R PCDEIY
Sbjct: 9 SRSSVAVADAASCYCAVILVALILLASVREYS--SLPTDES---VKGHQLLAR-PCDEIY 62
Query: 71 VVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPSTPRKLLR 122
VVGEGETLHTISDKCGDP+IVE+NPHIHDPDDVFPGLVIK I+PS RKLLR
Sbjct: 63 VVGEGETLHTISDKCGDPYIVEQNPHIHDPDDVFPGLVIK-ITPSKQRKLLR 113
>gi|351721055|ref|NP_001235917.1| uncharacterized protein LOC100500035 precursor [Glycine max]
gi|255628651|gb|ACU14670.1| unknown [Glycine max]
Length = 101
Score = 140 bits (354), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 70/97 (72%), Positives = 81/97 (83%), Gaps = 6/97 (6%)
Query: 15 ATLADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCDEIYVVGE 74
++ AD+ASWYCA+V+LA IL+GSIR +++A+E GN LL +RPCDEIYVVGE
Sbjct: 5 SSAADSASWYCAMVLLATILLGSIRESTVAEEGEPIK-----GNNLL-QRPCDEIYVVGE 58
Query: 75 GETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI 111
GETLHTISDKC DPFIVERNPHIHDPDDVFPGLVIKI
Sbjct: 59 GETLHTISDKCNDPFIVERNPHIHDPDDVFPGLVIKI 95
>gi|147767756|emb|CAN62985.1| hypothetical protein VITISV_027722 [Vitis vinifera]
Length = 113
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/112 (67%), Positives = 87/112 (77%), Gaps = 7/112 (6%)
Query: 11 ASSSATLADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCDEIY 70
+ SS +ADAAS YCA++++ALIL+ S+R S P D G QLL R PCDEIY
Sbjct: 9 SRSSVAVADAASCYCAVILVALILLXSVREYS--SLPTDES---VKGXQLLAR-PCDEIY 62
Query: 71 VVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPSTPRKLLR 122
VVGEGETLHTISDKCGDP+IVE+NPHIHDPDDVFPGLVIK I+PS RKLLR
Sbjct: 63 VVGEGETLHTISDKCGDPYIVEQNPHIHDPDDVFPGLVIK-ITPSKQRKLLR 113
>gi|351722484|ref|NP_001235454.1| uncharacterized protein LOC100500258 precursor [Glycine max]
gi|255629859|gb|ACU15280.1| unknown [Glycine max]
Length = 100
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/98 (70%), Positives = 82/98 (83%), Gaps = 5/98 (5%)
Query: 15 ATLADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCDEIYVVGE 74
++ AD+ASWYCA+V+LA+IL+GSIR +++A+E + GN L +RPCDEIYVVGE
Sbjct: 3 SSAADSASWYCAMVLLAMILLGSIRESTMAEEEGE----PIKGNNL-RQRPCDEIYVVGE 57
Query: 75 GETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKII 112
GETLHTISD C DPFIVERNPHIHDPDDVFPGLVIKII
Sbjct: 58 GETLHTISDMCNDPFIVERNPHIHDPDDVFPGLVIKII 95
>gi|388505396|gb|AFK40764.1| unknown [Lotus japonicus]
Length = 115
Score = 137 bits (345), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/114 (61%), Positives = 88/114 (77%), Gaps = 6/114 (5%)
Query: 10 AASSSATLADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCDEI 69
+ ++ + D+ASW+CA+V+L +IL+GSI+ ++ D D V GN L +R CDEI
Sbjct: 6 STATRKSRTDSASWFCAMVLLGIILLGSIKEST--SNTSDGDEVR--GNNLRDR-ACDEI 60
Query: 70 YVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPS-TPRKLLR 122
YVVGEGETL+TISDKCGDPFIVERNPHIHDPDDVFPGLVI+II+P RKLL+
Sbjct: 61 YVVGEGETLNTISDKCGDPFIVERNPHIHDPDDVFPGLVIRIITPMVNNRKLLK 114
>gi|388522061|gb|AFK49092.1| unknown [Lotus japonicus]
Length = 113
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/114 (61%), Positives = 88/114 (77%), Gaps = 6/114 (5%)
Query: 10 AASSSATLADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCDEI 69
+ ++ + D+ASW+CA+V+L +IL+GSI+ ++ D D V GN L +R CDEI
Sbjct: 4 STATRKSRTDSASWFCAMVLLGIILLGSIKEST--SNTSDGDEVR--GNNLRDR-ACDEI 58
Query: 70 YVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPS-TPRKLLR 122
YVVGEGETL+TISDKCGDPFIVERNPHIHDPDDVFPGLVI+II+P RKLL+
Sbjct: 59 YVVGEGETLNTISDKCGDPFIVERNPHIHDPDDVFPGLVIRIITPMVNNRKLLK 112
>gi|449465170|ref|XP_004150301.1| PREDICTED: uncharacterized protein LOC101210054 [Cucumis sativus]
gi|449516711|ref|XP_004165390.1| PREDICTED: uncharacterized LOC101210054 [Cucumis sativus]
Length = 120
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/100 (71%), Positives = 78/100 (78%), Gaps = 6/100 (6%)
Query: 17 LADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCDEIYVVGEGE 76
L D SWYCA+ +L LILIGSIR S + D + GN L+ RPCDEIYVVGEGE
Sbjct: 19 LIDVVSWYCAVGLLGLILIGSIRETSSSG-----DGRLLRGN-LVTWRPCDEIYVVGEGE 72
Query: 77 TLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPST 116
TLHTISDKCGDP+IVERNPHIHDPDDVFPGLVIKII+ ST
Sbjct: 73 TLHTISDKCGDPYIVERNPHIHDPDDVFPGLVIKIIASST 112
>gi|356520475|ref|XP_003528887.1| PREDICTED: uncharacterized protein LOC100815990 [Glycine max]
Length = 112
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/112 (63%), Positives = 84/112 (75%), Gaps = 8/112 (7%)
Query: 1 MAPSSPTRGAA-SSSATLADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQ 59
MA + P +G A +SS +A+AASWYCA V++AL L+ + +S+ P Y Q
Sbjct: 2 MASNYPRKGLALTSSKAIANAASWYCAFVLVALALLSMFKDSSMLI-PSQY-----ASGQ 55
Query: 60 LLNRRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI 111
LL+R PC+EIYVVGEGETLHTISDKCGDPFIVE NPHIHDPDDVFPGLVIKI
Sbjct: 56 LLSR-PCEEIYVVGEGETLHTISDKCGDPFIVENNPHIHDPDDVFPGLVIKI 106
>gi|255646878|gb|ACU23909.1| unknown [Glycine max]
Length = 112
Score = 134 bits (336), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 69/112 (61%), Positives = 82/112 (73%), Gaps = 8/112 (7%)
Query: 1 MAPSSPTRGAA-SSSATLADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQ 59
MA + P +G A +SS +A+AASWYCA V++AL L+ + +S+ Q
Sbjct: 2 MASNYPRKGLALTSSKAIANAASWYCAFVLVALALLSMFKDSSMLIPSQ------HASGQ 55
Query: 60 LLNRRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI 111
LL+R PC+EIYVVGEGETLHTISDKCGDPFIVE NPHIHDPDDVFPGLVIKI
Sbjct: 56 LLSR-PCEEIYVVGEGETLHTISDKCGDPFIVENNPHIHDPDDVFPGLVIKI 106
>gi|255539587|ref|XP_002510858.1| conserved hypothetical protein [Ricinus communis]
gi|223549973|gb|EEF51460.1| conserved hypothetical protein [Ricinus communis]
Length = 104
Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/108 (74%), Positives = 88/108 (81%), Gaps = 10/108 (9%)
Query: 16 TLADAASWYCAIVILALILIGS-IRGNSLADEPHDYDHVMRPGNQLLNRRPCDEIYVVGE 74
+ADAAS YCA+V+L LIL+GS I NS A EP G+QLL+R PCDEIYVVGE
Sbjct: 6 AIADAASCYCAVVLLGLILLGSVIESNSSAAEP-------VKGSQLLDR-PCDEIYVVGE 57
Query: 75 GETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPSTPRKLLR 122
GETLHTISDKCGDPFIVE+NPHIHDPDDVFPGLVIK I+PS PRKLLR
Sbjct: 58 GETLHTISDKCGDPFIVEQNPHIHDPDDVFPGLVIK-ITPSKPRKLLR 104
>gi|356532048|ref|XP_003534586.1| PREDICTED: uncharacterized protein LOC100778431 [Glycine max]
Length = 114
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/109 (58%), Positives = 79/109 (72%), Gaps = 2/109 (1%)
Query: 8 RGAASSSATLADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCD 67
R SSS +ADAASW CA +++L+L+ R S + D ++M + +L++ CD
Sbjct: 7 RAPISSSKAIADAASWCCACFLVSLLLLCIFRDISALHD--DQGNLMMRSSHVLSKPSCD 64
Query: 68 EIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPST 116
EIYVVGEGETLHTISDKCGDPFIVE+NPHIHDPDDVFPGLV+KI T
Sbjct: 65 EIYVVGEGETLHTISDKCGDPFIVEKNPHIHDPDDVFPGLVLKITRSQT 113
>gi|356561718|ref|XP_003549126.1| PREDICTED: uncharacterized protein LOC100789966 [Glycine max]
Length = 112
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 78/99 (78%), Gaps = 4/99 (4%)
Query: 13 SSATLADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCDEIYVV 72
S+ ++AD+ASW CA+ +L LIL+GSIR N + +E D G L RPCDEIYVV
Sbjct: 3 STKSIADSASWCCALALLCLILLGSIRENHVPEE----DEATARGRSNLFERPCDEIYVV 58
Query: 73 GEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI 111
GEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI
Sbjct: 59 GEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI 97
>gi|356529302|ref|XP_003533234.1| PREDICTED: uncharacterized protein LOC100793321 [Glycine max]
Length = 116
Score = 124 bits (311), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/99 (68%), Positives = 77/99 (77%)
Query: 13 SSATLADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCDEIYVV 72
S+ ++AD+ASW CA+ +L LIL+GSIR N + +E G L RPCDEIYVV
Sbjct: 3 STKSIADSASWCCALALLCLILLGSIRDNHVPEEEDPAAAATTRGRSNLFERPCDEIYVV 62
Query: 73 GEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI 111
GEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI
Sbjct: 63 GEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI 101
>gi|224067836|ref|XP_002302557.1| predicted protein [Populus trichocarpa]
gi|222844283|gb|EEE81830.1| predicted protein [Populus trichocarpa]
Length = 105
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/108 (70%), Positives = 88/108 (81%), Gaps = 5/108 (4%)
Query: 16 TLADAASWYCAIVILALILIGSIRGNS-LADEPHDYDHVMRPGNQLLNRRPCDEIYVVGE 74
++ADAA+WYCA+V+LALIL+ S+R S D+ +D V+ GNQ+L RPCDEIYVV E
Sbjct: 2 SVADAATWYCALVLLALILLASLREASPTYDDDRHHDVVV--GNQIL-YRPCDEIYVVKE 58
Query: 75 GETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPSTPRKLLR 122
GETLHTISDKC DPFIVE NPHIHDPDDVFPGLVIK I+PS RKLLR
Sbjct: 59 GETLHTISDKCDDPFIVEENPHIHDPDDVFPGLVIK-ITPSRSRKLLR 105
>gi|224122456|ref|XP_002318841.1| predicted protein [Populus trichocarpa]
gi|222859514|gb|EEE97061.1| predicted protein [Populus trichocarpa]
Length = 113
Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/118 (59%), Positives = 88/118 (74%), Gaps = 9/118 (7%)
Query: 5 SPTRGAASSSATLADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQLLNRR 64
S ++ S +ADAAS YCA+V+L LIL+GSIR +S+ +EP G+ +R
Sbjct: 4 SSSKKTMRISLAVADAASCYCAMVLLGLILLGSIRESSMTEEP-------VKGSHFFDR- 55
Query: 65 PCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPSTPRKLLR 122
PCDEIYVVGEGETL+TIS+KC DPFIVE+NPHIHDPDDV+PGLVIKI S S RK+++
Sbjct: 56 PCDEIYVVGEGETLNTISEKCDDPFIVEQNPHIHDPDDVYPGLVIKITS-SKSRKMMK 112
>gi|356537085|ref|XP_003537061.1| PREDICTED: uncharacterized protein LOC100780595 [Glycine max]
Length = 206
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 71/107 (66%), Gaps = 2/107 (1%)
Query: 13 SSATLADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGN-QLLNRRPCDEIYV 71
SS TLA+ SW C++ + ++++ S N+ H GN N + CDEIYV
Sbjct: 6 SSTTLAEKISWNCSVFVALMLVLSSCESNTSDFTSQMMLHGSVTGNISNNNNKACDEIYV 65
Query: 72 VGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPSTPR 118
V EGETL TIS+KCGDP+IVE NPHIHDPDDVFPGLVIK I+P T R
Sbjct: 66 VREGETLQTISEKCGDPYIVEENPHIHDPDDVFPGLVIK-INPFTNR 111
>gi|357140876|ref|XP_003571988.1| PREDICTED: uncharacterized protein LOC100821016 [Brachypodium
distachyon]
Length = 116
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 73/101 (72%), Gaps = 8/101 (7%)
Query: 18 ADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCDEIYVVGEGET 77
ADAASW A+ ++AL+L+ S+ A + V+ G +L +R PC+EIYVVGEGET
Sbjct: 16 ADAASWCFALSVVALLLVSSLG----AGAGEERGAVVVRGPRLQSRGPCEEIYVVGEGET 71
Query: 78 LHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPSTPR 118
LH ISD+CGDP+I+E NPH+HDPDDVFPGLVI I TPR
Sbjct: 72 LHGISDRCGDPYILEHNPHVHDPDDVFPGLVINI----TPR 108
>gi|351723045|ref|NP_001237009.1| uncharacterized protein LOC100306578 precursor [Glycine max]
gi|255628937|gb|ACU14813.1| unknown [Glycine max]
Length = 110
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/104 (62%), Positives = 80/104 (76%), Gaps = 3/104 (2%)
Query: 8 RGAASSSATLADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCD 67
R SSS LADAASW CA ++++L+L+ R +S + D ++M + +L++ PCD
Sbjct: 7 RAPISSSKALADAASWCCACLLVSLLLLCIFRDSSALHD--DQGNLMIRSSHVLSK-PCD 63
Query: 68 EIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI 111
EIYVVGEGE LHTISDKCGDPFIVE+NPHIHDPDDVFPGLVIKI
Sbjct: 64 EIYVVGEGEALHTISDKCGDPFIVEKNPHIHDPDDVFPGLVIKI 107
>gi|225453879|ref|XP_002273022.1| PREDICTED: uncharacterized protein LOC100252258 [Vitis vinifera]
Length = 97
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/106 (64%), Positives = 83/106 (78%), Gaps = 9/106 (8%)
Query: 17 LADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCDEIYVVGEGE 76
+A +ASWYCA+++++LIL+ S +SL E +R GNQL++R CDE+YVVGEGE
Sbjct: 1 MASSASWYCALLLVSLILLSSSVESSLGGER------IR-GNQLVDR-ACDEVYVVGEGE 52
Query: 77 TLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPSTPRKLLR 122
TLH ISDKCGDPFIVE+NPHI DPDDVFPGLVIK I+P RKLLR
Sbjct: 53 TLHMISDKCGDPFIVEQNPHIQDPDDVFPGLVIK-ITPYKSRKLLR 97
>gi|356548405|ref|XP_003542592.1| PREDICTED: uncharacterized protein LOC100786697 [Glycine max]
Length = 108
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 71/112 (63%), Gaps = 8/112 (7%)
Query: 9 GAASSSATLADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQLLN--RRPC 66
SS +A+ SW CA+ + ++++ S N+ D+ M + N + C
Sbjct: 2 ACGCSSTAMAEKISWNCAVFVALMLVLSSCESNT-----SDFTTQMMFHESVSNSNNKAC 56
Query: 67 DEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPSTPR 118
DEIYVV EGETL TIS+KCGDP+IVE NPHIHDPDDVFPGLVIK I+P T R
Sbjct: 57 DEIYVVREGETLQTISEKCGDPYIVEENPHIHDPDDVFPGLVIK-INPFTNR 107
>gi|357444111|ref|XP_003592333.1| hypothetical protein MTR_1g101750 [Medicago truncatula]
gi|355481381|gb|AES62584.1| hypothetical protein MTR_1g101750 [Medicago truncatula]
Length = 66
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/59 (83%), Positives = 56/59 (94%)
Query: 64 RPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPSTPRKLLR 122
+ CDEIYVVGEGETL+TIS+KCGDPFIVERNPHIHDPDDVFPGLVI+II+P+ RKLL+
Sbjct: 7 KACDEIYVVGEGETLNTISEKCGDPFIVERNPHIHDPDDVFPGLVIRIITPTNTRKLLK 65
>gi|242040459|ref|XP_002467624.1| hypothetical protein SORBIDRAFT_01g031120 [Sorghum bicolor]
gi|241921478|gb|EER94622.1| hypothetical protein SORBIDRAFT_01g031120 [Sorghum bicolor]
Length = 127
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 73/104 (70%), Gaps = 12/104 (11%)
Query: 19 DAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRP----GNQLLNRRPCDEIYVVGE 74
D ASW CA++ L ++ +GS+ G+ D+ YD R G +L RPCDE+YVV E
Sbjct: 14 DVASW-CALLALVMV-VGSLAGS--GDDEEQYDRGGRRLVVRGARLAAARPCDELYVVAE 69
Query: 75 GETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPSTPR 118
GETLH+IS +CGDP+I+E NPH+HDPDDVFPGLVIKI TPR
Sbjct: 70 GETLHSISARCGDPYILEHNPHVHDPDDVFPGLVIKI----TPR 109
>gi|242042471|ref|XP_002468630.1| hypothetical protein SORBIDRAFT_01g049330 [Sorghum bicolor]
gi|241922484|gb|EER95628.1| hypothetical protein SORBIDRAFT_01g049330 [Sorghum bicolor]
Length = 116
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 74/102 (72%), Gaps = 2/102 (1%)
Query: 18 ADAASWYCAIVILALILI-GSIRGNSLADEPHDYDHVMRPGNQLLNRRPCDEIYVVGEGE 76
ADA SW A+ ++A++L+ ++ G + V+ L+ RPC+EIYVV EGE
Sbjct: 16 ADATSWCVALSLVAMLLVVCTLGGAGDGAGAAEGGGVVVVRGAALSARPCEEIYVVAEGE 75
Query: 77 TLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPSTPR 118
TLH+ISD+CGDPFI+ERNPH+HDPDDVFPGLVI+ I+PS PR
Sbjct: 76 TLHSISDRCGDPFILERNPHVHDPDDVFPGLVIR-ITPSKPR 116
>gi|22328924|ref|NP_680740.1| peptidoglycan-binding LysM domain-containing protein [Arabidopsis
thaliana]
gi|45773918|gb|AAS76763.1| At4g25433 [Arabidopsis thaliana]
gi|110741643|dbj|BAE98768.1| hypothetical protein [Arabidopsis thaliana]
gi|332659657|gb|AEE85057.1| peptidoglycan-binding LysM domain-containing protein [Arabidopsis
thaliana]
Length = 110
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 74/108 (68%), Gaps = 10/108 (9%)
Query: 8 RGAASSSATLADAASWYCAIVILALILIGSIRGNSLADEPHDYD----HVMRPGNQLLNR 63
R S S T+A YC + +L L L GS++ ++ Y V R G Q++
Sbjct: 3 RVTVSRSNTVAS----YCLVALLILTLAGSVKNSNGGGSGEYYRGRNCEVWR-GKQMM-E 56
Query: 64 RPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI 111
RPC+E+YVVGEG+TLH+IS+KCGDPFIVERNPHIHDPDDVFPGL+IK+
Sbjct: 57 RPCEELYVVGEGDTLHSISEKCGDPFIVERNPHIHDPDDVFPGLLIKL 104
>gi|297799452|ref|XP_002867610.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313446|gb|EFH43869.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 114
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 73/111 (65%), Gaps = 12/111 (10%)
Query: 8 RGAASSSATLADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRP-------GNQL 60
R S S T+A YC + +L L L GS++ + ++ R G Q+
Sbjct: 3 RVTVSRSHTVAS----YCLVALLILTLAGSVKNSHGGGRRENFRAAGRGRNCEVWRGKQM 58
Query: 61 LNRRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI 111
+ R PC+E+YVVGEG+TLH+IS+KCGDPFIVERNPHIHDPDDVFPGL+IK+
Sbjct: 59 MER-PCEELYVVGEGDTLHSISEKCGDPFIVERNPHIHDPDDVFPGLLIKL 108
>gi|414867450|tpg|DAA46007.1| TPA: hypothetical protein ZEAMMB73_211269 [Zea mays]
Length = 117
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 71/98 (72%), Gaps = 9/98 (9%)
Query: 18 ADAASWYCAIVILALILIGSIRGNSLADEPHDYDH----VMRPGNQLLNRRPCDEIYVVG 73
AD ASW CA++ L ++ +GS+ G+ +EP Y V+R L RPCDE+YVV
Sbjct: 11 ADVASW-CALLALVMV-VGSLAGSG-KEEPEQYSRAGLVVVR--GPRLAARPCDELYVVA 65
Query: 74 EGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI 111
EGETLH+IS CGDP+I+ERNPH+HDPDDVFPGLVIKI
Sbjct: 66 EGETLHSISASCGDPYILERNPHVHDPDDVFPGLVIKI 103
>gi|414864403|tpg|DAA42960.1| TPA: lysM domain containing protein [Zea mays]
Length = 112
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 70/101 (69%), Gaps = 4/101 (3%)
Query: 18 ADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCDEIYVVGEGET 77
ADAASW A+ ++A++++ G V L+ RPC+EIYVV EGET
Sbjct: 16 ADAASWCVALSLVAMLVVVCTLGAGEGGGGAPVVVVRGAA---LSARPCEEIYVVAEGET 72
Query: 78 LHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPSTPR 118
LH+ISDKCGDP I+ERNPH+HDPDDVFPGLVI+ I+PS PR
Sbjct: 73 LHSISDKCGDPLILERNPHVHDPDDVFPGLVIR-ITPSKPR 112
>gi|226495799|ref|NP_001150468.1| lysM domain containing protein [Zea mays]
gi|195639468|gb|ACG39202.1| lysM domain containing protein [Zea mays]
Length = 113
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 71/101 (70%), Gaps = 3/101 (2%)
Query: 18 ADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCDEIYVVGEGET 77
ADAASW A+ ++A++++ G V+R L+ RPC+EIYVV EGET
Sbjct: 16 ADAASWCVALSLVAMLVVLCTLGAGEGGGAGAPVVVVR--GAALSARPCEEIYVVAEGET 73
Query: 78 LHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPSTPR 118
LH+ISDKCGDP I+ERNPH+HD DDVFPGLVI+ I+PS PR
Sbjct: 74 LHSISDKCGDPLILERNPHVHDXDDVFPGLVIR-ITPSKPR 113
>gi|225440950|ref|XP_002283136.1| PREDICTED: uncharacterized protein LOC100244252 [Vitis vinifera]
Length = 104
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 69/100 (69%), Gaps = 6/100 (6%)
Query: 12 SSSATLADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCDEIYV 71
SSS LA+ SWY + +L+ + S + +D +M ++ ++PCDEIYV
Sbjct: 5 SSSTELAEKISWY------SALLLALMLVLSCCESAQSHDEIMVRLHKKDAKKPCDEIYV 58
Query: 72 VGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI 111
V EGETLHTIS+KCGDP+IVE NPHIHDPDDVFPGLVIKI
Sbjct: 59 VREGETLHTISEKCGDPYIVEENPHIHDPDDVFPGLVIKI 98
>gi|297793777|ref|XP_002864773.1| peptidoglycan-binding LysM domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
gi|297310608|gb|EFH41032.1| peptidoglycan-binding LysM domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 102
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 78/108 (72%), Gaps = 9/108 (8%)
Query: 13 SSATLADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCDEIYVV 72
S A +D ++W A+V+L+LIL+ S+R N+ ++ G+Q + +PC+EIYVV
Sbjct: 4 SRAGSSDMSAWCSAVVLLSLILLLSVRENNASNSIR--------GSQF-STKPCEEIYVV 54
Query: 73 GEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPSTPRKL 120
GEGETLHTI DKCGDPFIVERNPHIHDPDDVFPGLV+KI RKL
Sbjct: 55 GEGETLHTIGDKCGDPFIVERNPHIHDPDDVFPGLVLKIAPFYFSRKL 102
>gi|356503801|ref|XP_003520691.1| PREDICTED: uncharacterized protein LOC100794241 [Glycine max]
Length = 99
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 71/102 (69%), Gaps = 3/102 (2%)
Query: 17 LADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCDEIYVVGEGE 76
+A+ SW C ++ +A+IL+ S +S +E + R N N++ CDEIYVV EGE
Sbjct: 1 MAEKISW-CCVLFMAIILVLSCCESS-TNEFRVQMLMQRNINNNNNKKACDEIYVVREGE 58
Query: 77 TLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPSTPR 118
TL TIS+KCGDP+IVE NPHI DPDDVFPGLVIK I+P T R
Sbjct: 59 TLQTISEKCGDPYIVEENPHIQDPDDVFPGLVIK-INPFTNR 99
>gi|15241722|ref|NP_201021.1| peptidoglycan-binding LysM domain-containing protein [Arabidopsis
thaliana]
gi|10176933|dbj|BAB10177.1| unnamed protein product [Arabidopsis thaliana]
gi|46518349|gb|AAS99656.1| At5g62150 [Arabidopsis thaliana]
gi|48310309|gb|AAT41795.1| At5g62150 [Arabidopsis thaliana]
gi|332010187|gb|AED97570.1| peptidoglycan-binding LysM domain-containing protein [Arabidopsis
thaliana]
Length = 102
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 51/60 (85%)
Query: 61 LNRRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPSTPRKL 120
+ +PC+EIY+VGEGETLHTI DKCGDPFIVERNPHIHDPDDVFPGLV+KI RKL
Sbjct: 43 FSTKPCEEIYIVGEGETLHTIGDKCGDPFIVERNPHIHDPDDVFPGLVLKIAPFYFNRKL 102
>gi|326487824|dbj|BAK05584.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 156
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 47/48 (97%)
Query: 64 RPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI 111
RPCDE+YVVGEGETLHTISDKCGDPFIVERNPH+HDPDDVFPGLVI +
Sbjct: 103 RPCDEVYVVGEGETLHTISDKCGDPFIVERNPHVHDPDDVFPGLVIAL 150
>gi|297721751|ref|NP_001173239.1| Os03g0118450 [Oryza sativa Japonica Group]
gi|222624088|gb|EEE58220.1| hypothetical protein OsJ_09188 [Oryza sativa Japonica Group]
gi|255674162|dbj|BAH91967.1| Os03g0118450 [Oryza sativa Japonica Group]
Length = 122
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 45/58 (77%), Positives = 53/58 (91%), Gaps = 1/58 (1%)
Query: 61 LNRRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPSTPR 118
L+ R C+EIYVV EGETLH+ISDKCGDP+I+E+NPH+HDPDDVFPGLVIK I+PS PR
Sbjct: 66 LSARACEEIYVVAEGETLHSISDKCGDPYILEQNPHVHDPDDVFPGLVIK-ITPSKPR 122
>gi|218191971|gb|EEC74398.1| hypothetical protein OsI_09751 [Oryza sativa Indica Group]
Length = 122
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 45/58 (77%), Positives = 53/58 (91%), Gaps = 1/58 (1%)
Query: 61 LNRRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPSTPR 118
L+ R C+EIYVV EGETLH+ISDKCGDP+I+E+NPH+HDPDDVFPGLVIK I+PS PR
Sbjct: 66 LSARACEEIYVVAEGETLHSISDKCGDPYILEQNPHVHDPDDVFPGLVIK-ITPSKPR 122
>gi|297820008|ref|XP_002877887.1| peptidoglycan-binding LysM domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
gi|297323725|gb|EFH54146.1| peptidoglycan-binding LysM domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 109
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 71/105 (67%), Gaps = 8/105 (7%)
Query: 12 SSSATLADAASWYCAIVILALILIGSIRGNSLADE-PHDYDHVMRPGNQLL---NRRP-C 66
SSS +A+ SWYCA+ ++L+ S + +A+E + +P + +RRP C
Sbjct: 4 SSSMAVAEKISWYCAVFAAMMLLMNSFQ---VAEEGSTEIVEQQQPSMMITGYSDRRPAC 60
Query: 67 DEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI 111
DEIY V EGETL TIS+KCGDP+IVE NPHIHD DD+FPGL+I+I
Sbjct: 61 DEIYEVKEGETLQTISEKCGDPYIVEGNPHIHDHDDLFPGLLIRI 105
>gi|357510995|ref|XP_003625786.1| hypothetical protein MTR_7g104250 [Medicago truncatula]
gi|355500801|gb|AES82004.1| hypothetical protein MTR_7g104250 [Medicago truncatula]
Length = 96
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 67/105 (63%), Gaps = 12/105 (11%)
Query: 17 LADAASWYCAI---VILALILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCDEIYVVG 73
+A S YC + VI+ L+ R + L E R N N + CDEIYVV
Sbjct: 1 MAMRISRYCVLFSAVIILLLNCCESRRSELTVEMKQ-----RIAN---NNKACDEIYVVR 52
Query: 74 EGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPSTPR 118
EGETLHTIS+KCGDPFIVE NPHIHDPDDVFPGLVIK I+P T R
Sbjct: 53 EGETLHTISEKCGDPFIVEENPHIHDPDDVFPGLVIK-INPFTNR 96
>gi|15231684|ref|NP_190847.1| peptidoglycan-binding LysM domain-containing protein [Arabidopsis
thaliana]
gi|7669953|emb|CAB89240.1| putative protein [Arabidopsis thaliana]
gi|27808562|gb|AAO24561.1| At3g52790 [Arabidopsis thaliana]
gi|110736294|dbj|BAF00117.1| hypothetical protein [Arabidopsis thaliana]
gi|332645473|gb|AEE78994.1| peptidoglycan-binding LysM domain-containing protein [Arabidopsis
thaliana]
Length = 109
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 70/105 (66%), Gaps = 8/105 (7%)
Query: 12 SSSATLADAASWYCAIVILALILIGSIR----GNSLADEPHDYDHVMRPGNQLLNRRP-C 66
SSS +A+ SWYCA+ ++L+ S + G++ E +M G +RRP C
Sbjct: 4 SSSMAVAEKISWYCAVFAAMMLLMNSFQVAQEGSTEIVEKQQ-PSMMITGYS--HRRPAC 60
Query: 67 DEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI 111
DEIY V EGETL TIS+KCGDP+IVE NPHIHD DD+FPGL+I+I
Sbjct: 61 DEIYEVKEGETLQTISEKCGDPYIVEGNPHIHDHDDLFPGLLIRI 105
>gi|27452901|gb|AAO15285.1| Putative dihydrodipicolinate reductase-like protein [Oryza sativa
Japonica Group]
Length = 463
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/57 (77%), Positives = 52/57 (91%), Gaps = 1/57 (1%)
Query: 61 LNRRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPSTP 117
L+ R C+EIYVV EGETLH+ISDKCGDP+I+E+NPH+HDPDDVFPGLVIK I+PS P
Sbjct: 66 LSARACEEIYVVAEGETLHSISDKCGDPYILEQNPHVHDPDDVFPGLVIK-ITPSKP 121
>gi|38605944|emb|CAD41658.3| OSJNBa0019K04.5 [Oryza sativa Japonica Group]
gi|116309923|emb|CAH66956.1| OSIGBa0147H17.4 [Oryza sativa Indica Group]
gi|125591347|gb|EAZ31697.1| hypothetical protein OsJ_15845 [Oryza sativa Japonica Group]
Length = 119
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 47/48 (97%)
Query: 64 RPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI 111
RPC+E+YVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVI +
Sbjct: 65 RPCEEVYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIAL 112
>gi|293336063|ref|NP_001168445.1| uncharacterized protein LOC100382217 [Zea mays]
gi|223948345|gb|ACN28256.1| unknown [Zea mays]
gi|413919211|gb|AFW59143.1| hypothetical protein ZEAMMB73_281794 [Zea mays]
Length = 130
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/49 (85%), Positives = 47/49 (95%)
Query: 64 RPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKII 112
RPC+E+YVVGEGETLH+ISD+CGDPFIVERNPHIHDPDDVFPGLVI +
Sbjct: 77 RPCEEVYVVGEGETLHSISDRCGDPFIVERNPHIHDPDDVFPGLVIALC 125
>gi|326500138|dbj|BAJ90904.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 124
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 70/101 (69%), Gaps = 8/101 (7%)
Query: 12 SSSATLADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQLLNR-RPCDEIY 70
++ + LADA+SW A+ LA +L+ G + + V G L R RPC+EIY
Sbjct: 15 TTRSRLADASSWCLALSALAALLLVCSLGETT-------EAVTVRGASLSARWRPCEEIY 67
Query: 71 VVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI 111
VV EGETLH ISD+CGDP+I+ERNPH+HDPDDVFPGLV++I
Sbjct: 68 VVAEGETLHGISDRCGDPYILERNPHVHDPDDVFPGLVLRI 108
>gi|115483026|ref|NP_001065106.1| Os10g0524300 [Oryza sativa Japonica Group]
gi|62733656|gb|AAO00717.2| expressed protein [Oryza sativa Japonica Group]
gi|78708937|gb|ABB47912.1| LysM domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113639715|dbj|BAF27020.1| Os10g0524300 [Oryza sativa Japonica Group]
gi|215693225|dbj|BAG88607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 108
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 53/62 (85%), Gaps = 4/62 (6%)
Query: 57 GNQLLNRRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPST 116
G +L RPC+EIYVV EGETLH+ISD+CGDP+I+E+NPH+HDPDDVFPGLVIKI T
Sbjct: 46 GARLAAARPCEEIYVVEEGETLHSISDRCGDPYILEQNPHVHDPDDVFPGLVIKI----T 101
Query: 117 PR 118
PR
Sbjct: 102 PR 103
>gi|125532699|gb|EAY79264.1| hypothetical protein OsI_34380 [Oryza sativa Indica Group]
gi|125575452|gb|EAZ16736.1| hypothetical protein OsJ_32213 [Oryza sativa Japonica Group]
Length = 106
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 53/62 (85%), Gaps = 4/62 (6%)
Query: 57 GNQLLNRRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPST 116
G +L RPC+EIYVV EGETLH+ISD+CGDP+I+E+NPH+HDPDDVFPGLVIKI T
Sbjct: 44 GARLAAARPCEEIYVVEEGETLHSISDRCGDPYILEQNPHVHDPDDVFPGLVIKI----T 99
Query: 117 PR 118
PR
Sbjct: 100 PR 101
>gi|357168226|ref|XP_003581545.1| PREDICTED: uncharacterized protein LOC100838759 [Brachypodium
distachyon]
Length = 208
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/47 (85%), Positives = 46/47 (97%)
Query: 65 PCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI 111
PC+E+YVVGEGETLH+ISDKCGDPFIVERNPH+HDPDDVFPGLV+ +
Sbjct: 156 PCEEVYVVGEGETLHSISDKCGDPFIVERNPHVHDPDDVFPGLVLAL 202
>gi|224113145|ref|XP_002316406.1| predicted protein [Populus trichocarpa]
gi|222865446|gb|EEF02577.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 66/95 (69%), Gaps = 7/95 (7%)
Query: 17 LADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCDEIYVVGEGE 76
+A+ SWYCA+++ ++++ + + V P + +PCDEIYVV EGE
Sbjct: 1 MAEKISWYCALLMALMLVLSCCEVSET-----ELSTVGHP--RFFENKPCDEIYVVREGE 53
Query: 77 TLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI 111
TL+TIS+KCGDP+IVE NPHIHDPDDVFPGLVIKI
Sbjct: 54 TLNTISEKCGDPYIVEENPHIHDPDDVFPGLVIKI 88
>gi|326517473|dbj|BAK03655.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 120
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/56 (78%), Positives = 49/56 (87%), Gaps = 4/56 (7%)
Query: 63 RRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPSTPR 118
RRPCDEIYVV E ETLH+ISD+CGDP+I+E NPH+HDPDDVFPGLVIKI TPR
Sbjct: 62 RRPCDEIYVVAEEETLHSISDRCGDPYILEHNPHVHDPDDVFPGLVIKI----TPR 113
>gi|148907358|gb|ABR16814.1| unknown [Picea sitchensis]
Length = 97
Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 45/59 (76%), Gaps = 2/59 (3%)
Query: 60 LLNR--RPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISPST 116
++NR RPC+EIY+VGEGETL TIS+KC PFI+ NPHI D DD++ GL +KI S T
Sbjct: 38 IVNRHNRPCEEIYIVGEGETLQTISEKCNAPFILFDNPHIQDTDDIYEGLPLKITSLDT 96
>gi|116778633|gb|ABK20943.1| unknown [Picea sitchensis]
Length = 89
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 37/46 (80%)
Query: 66 CDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI 111
C+EIY+VGEGETL TIS+KC PFI+ NPHI D DD++ G+ +KI
Sbjct: 40 CEEIYIVGEGETLQTISEKCNAPFILFDNPHIQDTDDIYEGVPLKI 85
>gi|357486567|ref|XP_003613571.1| hypothetical protein MTR_5g038200 [Medicago truncatula]
gi|355514906|gb|AES96529.1| hypothetical protein MTR_5g038200 [Medicago truncatula]
Length = 74
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 64 RPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDV 103
+ CDE YVV EG+T ++I++KC DPFI+ NPH+ DP D+
Sbjct: 35 KECDEFYVVREGDTFYSIAEKCNDPFILLSNPHVRDPQDI 74
>gi|357505141|ref|XP_003622859.1| Cell division cycle protein-like protein [Medicago truncatula]
gi|355497874|gb|AES79077.1| Cell division cycle protein-like protein [Medicago truncatula]
Length = 496
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 42/100 (42%), Gaps = 47/100 (47%)
Query: 13 SSATLADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCDEIYVV 72
SS + AASWYCAI H+M
Sbjct: 443 SSKAIVGAASWYCAI------------------------HIM------------------ 460
Query: 73 GEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKII 112
L T SDKC PFIV+ NPHIHDPDDVFPGLVI I
Sbjct: 461 -----LSTNSDKCDGPFIVKNNPHIHDPDDVFPGLVINPI 495
>gi|168020021|ref|XP_001762542.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686275|gb|EDQ72665.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 59
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 36/53 (67%)
Query: 59 QLLNRRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI 111
++L PC YVV GE+L IS+KC D FI+E NPHI D DD+F G ++K+
Sbjct: 3 RMLRGCPCGPTYVVRGGESLQMISEKCNDQFILENNPHIVDHDDLFEGQLLKM 55
>gi|357438289|ref|XP_003589420.1| LysM domain containing protein [Medicago truncatula]
gi|357473045|ref|XP_003606807.1| LysM domain containing protein [Medicago truncatula]
gi|355478468|gb|AES59671.1| LysM domain containing protein [Medicago truncatula]
gi|355507862|gb|AES89004.1| LysM domain containing protein [Medicago truncatula]
Length = 72
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 32/41 (78%)
Query: 71 VVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI 111
+V EGET ++I++KC D I+ NP++HD +D+ PG++++I
Sbjct: 28 MVKEGETYYSIAEKCDDQSILFSNPNVHDSEDIVPGVILRI 68
>gi|433444140|ref|ZP_20409150.1| spore coat assembly protein SafA [Anoxybacillus flavithermus
TNO-09.006]
gi|432001788|gb|ELK22657.1| spore coat assembly protein SafA [Anoxybacillus flavithermus
TNO-09.006]
Length = 318
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 68 EIYVVGEGETLHTISDKCGDPF--IVERNPHIHDPDDVFPGLVIKIISPSTPRK 119
+I++V +G+TL I++K G F + + N H+ DPD + PG+ IK+ +P TP K
Sbjct: 2 KIHIVQKGDTLWKIAEKYGVDFEELKKMNAHLSDPDYIMPGMKIKVPTPVTPVK 55
>gi|258516576|ref|YP_003192798.1| molybdenum ABC transporter periplasmic molybdate-binding protein
[Desulfotomaculum acetoxidans DSM 771]
gi|257780281|gb|ACV64175.1| molybdenum ABC transporter, periplasmic molybdate-binding protein
[Desulfotomaculum acetoxidans DSM 771]
Length = 335
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 67 DEIYVVGEGETLHTISDKCGDPF--IVERNPHIHDPDDVFPGLVIKI 111
+ Y+V G+T+ TIS K G ++ NP I +PD +FPG VI I
Sbjct: 58 QKTYIVQAGDTMFTISQKYGIELETLIAANPQIKNPDLIFPGQVINI 104
>gi|212638550|ref|YP_002315070.1| LysM domain-containing protein [Anoxybacillus flavithermus WK1]
gi|212560030|gb|ACJ33085.1| LysM domain containing protein [Anoxybacillus flavithermus WK1]
Length = 310
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 68 EIYVVGEGETLHTISDKCGDPF--IVERNPHIHDPDDVFPGLVIKIISPSTPRKLLR 122
+I++V +G+TL I++K G F + + N H+ DP+ + PG+ IK+ +P+ P K ++
Sbjct: 2 KIHIVQKGDTLWKIAEKYGVDFEELKKMNAHLSDPNYIMPGMKIKVPTPAAPAKPVK 58
>gi|333897060|ref|YP_004470934.1| spore coat assembly protein SafA [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112325|gb|AEF17262.1| spore coat assembly protein SafA [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 120
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 12/111 (10%)
Query: 9 GAASSSATLADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQLL------N 62
G ++ T+ S + + + L IR N P+ ++ PG Q+
Sbjct: 9 GHCRTTYTVRPGDSMWTIANMFGIPLDCLIRANPQIPNPN----LIYPGQQICIPAYCPP 64
Query: 63 RRPCDEIYVVGEGETLHTISDKCGDPF--IVERNPHIHDPDDVFPGLVIKI 111
R C E+Y+V G+++ TI++ G P ++ NP I +P+ ++PG I I
Sbjct: 65 ERHCREMYIVRPGDSMWTIANMYGIPLDCLIRANPQIPNPNLIYPGQQICI 115
>gi|374603486|ref|ZP_09676465.1| LysM repeat protein [Paenibacillus dendritiformis C454]
gi|374390957|gb|EHQ62300.1| LysM repeat protein [Paenibacillus dendritiformis C454]
Length = 523
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 68 EIYVVGEGETLHTISDKCGDPF--IVERNPHIHDPDDVFPGLVIKIISPSTPR 118
+I++V GE+L++IS K G P +++ NP + DP+++ G+ IK+ S S P+
Sbjct: 2 KIHIVKNGESLYSISQKYGVPLEELIKMNPQLKDPNEIDVGMKIKVPSSSHPQ 54
>gi|358011410|ref|ZP_09143220.1| LysM domain/BON superfamily protein [Acinetobacter sp. P8-3-8]
Length = 157
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 51 DHVMRPGNQL--LNRRPCDEIYVVGEGETLHTISDKC-GD----PFIVERN-PHIHDPDD 102
DHV + +Q+ + P + Y V G+ L I+ + GD P I E N P + DPD+
Sbjct: 87 DHVAQVDDQMTVVTPEPESKFYTVKSGDNLSKIAKEVYGDANKYPKIFEANKPMLKDPDE 146
Query: 103 VFPGLVIKI 111
+FPG V++I
Sbjct: 147 IFPGQVLRI 155
>gi|304316806|ref|YP_003851951.1| spore coat assembly protein SafA [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433654949|ref|YP_007298657.1| spore coat assembly protein SafA [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|302778308|gb|ADL68867.1| spore coat assembly protein SafA [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433293138|gb|AGB18960.1| spore coat assembly protein SafA [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 120
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 12/82 (14%)
Query: 38 IRGNSLADEPHDYDHVMRPGNQLL------NRRPCDEIYVVGEGETLHTISDKCGDPF-- 89
IR N P+ ++ PG Q+ R C E+Y+V G+++ TI++ G P
Sbjct: 38 IRANPQIPNPN----LIYPGQQICIPAFCPPERHCREMYIVRPGDSMWTIANMYGIPLDC 93
Query: 90 IVERNPHIHDPDDVFPGLVIKI 111
++ NP I +P+ ++PG I I
Sbjct: 94 LIRANPQIPNPNLIYPGQQICI 115
>gi|147678269|ref|YP_001212484.1| LysM repeat-containing protein [Pelotomaculum thermopropionicum SI]
gi|146274366|dbj|BAF60115.1| FOG: LysM repeat [Pelotomaculum thermopropionicum SI]
Length = 127
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 47 PHDYDHVMRPGNQLLNRRPCDEIYVVGEGETLHTISDKCGDPF--IVERNPHIHDPDDVF 104
P H+ PG + R +Y+V GETL++I+ K + +++ NP I DP+ ++
Sbjct: 40 PGQIIHIPLPGKAPIPRA---ALYIVQPGETLNSIALKFNVQYGSLLQANPQIGDPNLIY 96
Query: 105 PGLVIKI 111
PG +I I
Sbjct: 97 PGQIIAI 103
>gi|390934982|ref|YP_006392487.1| spore coat assembly protein SafA [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570483|gb|AFK86888.1| spore coat assembly protein SafA [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 120
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 12/82 (14%)
Query: 38 IRGNSLADEPHDYDHVMRPGNQLL------NRRPCDEIYVVGEGETLHTISDKCGDPF-- 89
IR N P+ ++ PG Q+ R C E+Y+V G+++ TI++ G P
Sbjct: 38 IRANPQIPNPN----LIYPGQQICIPAYCPPERHCREMYIVRPGDSMWTIANMYGIPLDC 93
Query: 90 IVERNPHIHDPDDVFPGLVIKI 111
++ NP I +P+ ++PG I I
Sbjct: 94 LIRANPQIPNPNLIYPGQQICI 115
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 66 CDEIYVVGEGETLHTISDKCGDPF--IVERNPHIHDPDDVFPGLVIKIISPSTPRKLLR 122
C Y+V G+++ TI++ G P ++ NP I +P+ ++PG I I + P + R
Sbjct: 11 CRTTYIVRPGDSMWTIANMFGIPLDCLIRANPQIPNPNLIYPGQQICIPAYCPPERHCR 69
>gi|257465134|ref|ZP_05629505.1| LysM domain/BON superfamily protein [Actinobacillus minor 202]
gi|257450794|gb|EEV24837.1| LysM domain/BON superfamily protein [Actinobacillus minor 202]
Length = 147
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 19/106 (17%)
Query: 15 ATLADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPC---DEIYV 71
A+L+ AS AI A+++ G++ G D V Q+ N DE YV
Sbjct: 48 ASLSGVASTAAAIE-KAVLMAGNVAG---------IDTVNIDNVQIANGEQIAGDDEFYV 97
Query: 72 VGEGETLHTISDKC---GDPF--IVERNPH-IHDPDDVFPGLVIKI 111
+ +G+TL I++K G + IVE N I D D +FPG I+I
Sbjct: 98 IAKGDTLWKIAEKAYGNGAKYTAIVEANKEVIKDADKIFPGQKIRI 143
>gi|218288872|ref|ZP_03493123.1| Peptidoglycan-binding LysM [Alicyclobacillus acidocaldarius LAA1]
gi|218240961|gb|EED08138.1| Peptidoglycan-binding LysM [Alicyclobacillus acidocaldarius LAA1]
Length = 259
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 70 YVVGEGETLHTISDKCGD--PFIVERNPHIHDPDDVFPGLVIKI 111
YVV GE+L+ IS K G P I+ NP I + +D+ PG+ I I
Sbjct: 4 YVVKPGESLYQISRKTGVRLPLILAANPQIKNANDITPGMTIVI 47
>gi|83590119|ref|YP_430128.1| peptidoglycan-binding LysM [Moorella thermoacetica ATCC 39073]
gi|83573033|gb|ABC19585.1| Peptidoglycan-binding LysM [Moorella thermoacetica ATCC 39073]
Length = 307
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 65 PCDEIYVVGEGETLHTISDKCGDPF--IVERNPHIHDPDDVFPG--LVIKIISPSTPRK 119
P IYVV G+TL I+ G I+ NPHI DP+ ++PG L I +I + PR+
Sbjct: 138 PNGFIYVVRPGDTLSGIASMFGTTVDQIMAANPHIKDPNLIYPGQRLCIPLIPTAMPRR 196
>gi|436834343|ref|YP_007319559.1| Peptidoglycan-binding lysin domain protein [Fibrella aestuarina BUZ
2]
gi|384065756|emb|CCG98966.1| Peptidoglycan-binding lysin domain protein [Fibrella aestuarina BUZ
2]
Length = 158
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 16/85 (18%)
Query: 33 ILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCDEIYVVGEGETLHTISDKC-GDPF-- 89
+ +G++ G ++ D D N P + + V EG+TL IS K GDP
Sbjct: 81 LAVGNVEGVTVVDNQLQVD----------NPEPEGQFHTVEEGDTLSAISKKVYGDPMKY 130
Query: 90 --IVERN-PHIHDPDDVFPGLVIKI 111
I E N P + PD ++PG V++I
Sbjct: 131 GIIFEANKPMLKSPDLIYPGQVLRI 155
>gi|258512085|ref|YP_003185519.1| Peptidoglycan-binding lysin domain-containing protein
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|257478811|gb|ACV59130.1| Peptidoglycan-binding lysin domain protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 259
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 70 YVVGEGETLHTISDKCGD--PFIVERNPHIHDPDDVFPGLVIKI 111
YVV GE+L+ IS K G P I+ NP I + +D+ PG+ I I
Sbjct: 4 YVVKPGESLYQISRKTGVRLPLILAANPQIKNANDIAPGMTIVI 47
>gi|218778340|ref|YP_002429658.1| peptidoglycan-binding LysM [Desulfatibacillum alkenivorans AK-01]
gi|218759724|gb|ACL02190.1| Peptidoglycan-binding LysM [Desulfatibacillum alkenivorans AK-01]
Length = 353
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 70 YVVGEGETLHTISDKCGD-----PFIVERNPHIHDPDDVFPGLVIKI 111
Y V EG+TL IS+K D P + ++NPHI +P + PG VI I
Sbjct: 41 YTVQEGDTLWDISEKFFDTPAMWPEVWKQNPHIKNPHWIEPGTVINI 87
>gi|315127433|ref|YP_004069436.1| lipoprotein NlpD precursor [Pseudoalteromonas sp. SM9913]
gi|315015947|gb|ADT69285.1| lipoprotein NlpD precursor [Pseudoalteromonas sp. SM9913]
Length = 274
Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 70 YVVGEGETLHTISDKCGDPFI-VERNPHIHDPDDVFPGLVIKIISPSTPR 118
Y V +G+TL++I+ G F + +N I P + PG V+ ++ PS PR
Sbjct: 50 YTVQKGDTLYSIAFSAGKDFRELAKNNSIASPYIIVPGQVVSLLEPSKPR 99
>gi|293609072|ref|ZP_06691375.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|375133708|ref|YP_004994358.1| cation transport ATPase [Acinetobacter calcoaceticus PHEA-2]
gi|427425703|ref|ZP_18915787.1| LysM domain protein [Acinetobacter baumannii WC-136]
gi|292829645|gb|EFF88007.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325121153|gb|ADY80676.1| cation transport ATPase [Acinetobacter calcoaceticus PHEA-2]
gi|425697566|gb|EKU67238.1| LysM domain protein [Acinetobacter baumannii WC-136]
Length = 157
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 51 DHVMRPGNQLL--NRRPCDEIYVVGEGETLHTISDKC-GD----PFIVERN-PHIHDPDD 102
DHV + +Q+ P + Y V G+ L I+ + GD P I E N P + DPD+
Sbjct: 87 DHVAQVDDQMTVATPEPESKFYTVKSGDNLSKIAKEVYGDANQYPKIFEANKPMLKDPDE 146
Query: 103 VFPGLVIKI 111
+FPG V++I
Sbjct: 147 IFPGQVLRI 155
>gi|359436880|ref|ZP_09226959.1| lipoprotein NlpD [Pseudoalteromonas sp. BSi20311]
gi|358028477|dbj|GAA63208.1| lipoprotein NlpD [Pseudoalteromonas sp. BSi20311]
Length = 274
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 70 YVVGEGETLHTISDKCGDPFI-VERNPHIHDPDDVFPGLVIKIISPSTPR 118
Y V +G+TL++I+ G F + +N I P + PG V+ ++ PS PR
Sbjct: 50 YTVQKGDTLYSIAFSAGKDFRELAKNNAIASPYIIVPGQVVSLLEPSKPR 99
>gi|435854190|ref|YP_007315509.1| LysM domain-containing protein [Halobacteroides halobius DSM 5150]
gi|433670601|gb|AGB41416.1| LysM domain-containing protein [Halobacteroides halobius DSM 5150]
Length = 199
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 70 YVVGEGETLHTISDKCGDPF--IVERNPHIHDPDDVFPGLVIKII-SPSTP 117
Y V G+T++ I+ ++E NPHI DPD +FPG V+ I +PS P
Sbjct: 21 YTVQPGDTMYFIAQTFDTTLNQLIEANPHIEDPDRIFPGDVLCIPGAPSVP 71
>gi|404492645|ref|YP_006716751.1| lysM domain-containing protein [Pelobacter carbinolicus DSM 2380]
gi|77544727|gb|ABA88289.1| LysM domain lipoprotein [Pelobacter carbinolicus DSM 2380]
Length = 243
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 15/66 (22%)
Query: 64 RPCDEIYVVGEGETLHTISDK---CGDPFI------VERNPHIHDPDDVFPGLVIKIISP 114
RP +Y VG GETL TI+ + GDP + R+ I DP V+PG + I
Sbjct: 141 RPILTVYRVGAGETLWTIASQREIYGDPLLWPLLYQANRD-QIRDPRQVYPGQSLSI--- 196
Query: 115 STPRKL 120
PRKL
Sbjct: 197 --PRKL 200
>gi|240948835|ref|ZP_04753191.1| hypothetical protein AM305_08039 [Actinobacillus minor NM305]
gi|240296650|gb|EER47261.1| hypothetical protein AM305_08039 [Actinobacillus minor NM305]
Length = 147
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 19/106 (17%)
Query: 15 ATLADAASWYCAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPC---DEIYV 71
A+L+ AS AI A+++ G++ G D V Q+ N DE Y+
Sbjct: 48 ASLSGVASTAAAIE-KAVLMAGNVAG---------IDTVNIDNVQIANGEQIAGDDEFYI 97
Query: 72 VGEGETLHTISDKC---GDPF--IVERNPH-IHDPDDVFPGLVIKI 111
+ +G+TL I++K G + IVE N I D D +FPG I+I
Sbjct: 98 IAKGDTLWKIAEKAYGNGAKYTAIVEANKEVIKDADKIFPGQKIRI 143
>gi|86143694|ref|ZP_01062070.1| hypothetical protein MED217_00335 [Leeuwenhoekiella blandensis
MED217]
gi|85829737|gb|EAQ48199.1| hypothetical protein MED217_00335 [Leeuwenhoekiella blandensis
MED217]
Length = 164
Score = 37.4 bits (85), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 16/85 (18%)
Query: 33 ILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCDEIYVVGEGETLHTISDKC-GD---- 87
+++G++ G + D+ + +H + P + + V G+TL I+ K G+
Sbjct: 86 LVVGNVEGIAQVDDQMEVEH----------KEPEAQFHTVVSGDTLSKIAKKFYGNAMKY 135
Query: 88 PFIVERN-PHIHDPDDVFPGLVIKI 111
P I E N P + DPD ++PG V++I
Sbjct: 136 PVIFEANKPMLKDPDKIYPGQVLRI 160
>gi|262280075|ref|ZP_06057860.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262260426|gb|EEY79159.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 157
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 51 DHVMRPGNQLL--NRRPCDEIYVVGEGETLHTISDKC-GD----PFIVERN-PHIHDPDD 102
DHV + +Q+ P + Y V G+ L I+ + GD P I E N P + DPD+
Sbjct: 87 DHVAQVDDQMTVATPEPESKFYTVKSGDNLSKIAKEFYGDANQYPKIFEANKPMLKDPDE 146
Query: 103 VFPGLVIKI 111
+FPG V++I
Sbjct: 147 IFPGQVLRI 155
>gi|149182265|ref|ZP_01860745.1| hypothetical protein BSG1_19909 [Bacillus sp. SG-1]
gi|148850034|gb|EDL64204.1| hypothetical protein BSG1_19909 [Bacillus sp. SG-1]
Length = 206
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 68 EIYVVGEGETLHTISDK--CGDPFIVERNPHIHDPDDVFPGLVIKI 111
++Y V G+TL IS K G I+E NP I +PD ++PG I I
Sbjct: 28 DVYYVQRGDTLWIISKKYQIGLSEIIEANPQIPNPDLIYPGQKINI 73
>gi|299771347|ref|YP_003733373.1| LysM domain/BON superfamily protein [Acinetobacter oleivorans DR1]
gi|298701435|gb|ADI92000.1| LysM domain/BON superfamily protein [Acinetobacter oleivorans DR1]
Length = 157
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 51 DHVMRPGNQLL--NRRPCDEIYVVGEGETLHTISDKC-GD----PFIVERN-PHIHDPDD 102
DHV + +Q+ P + Y V G+ L I+ + GD P I E N P + DPD+
Sbjct: 87 DHVAQVDDQMTVATPEPESKFYTVKSGDNLSKIAKEFYGDANQYPKIFEANKPMLKDPDE 146
Query: 103 VFPGLVIKI 111
+FPG V++I
Sbjct: 147 IFPGQVLRI 155
>gi|410663443|ref|YP_006915814.1| hemagglutination activity domain-containing protein [Simiduia
agarivorans SA1 = DSM 21679]
gi|409025800|gb|AFU98084.1| hemagglutination activity domain-containing protein [Simiduia
agarivorans SA1 = DSM 21679]
Length = 4178
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 5/51 (9%)
Query: 67 DEIYVVGEGETLHTISDK-CGDPF----IVERNPHIHDPDDVFPGLVIKII 112
++ Y V EG+TL I++K DPF + ++NP I +PD ++ G VIK+I
Sbjct: 4084 EQSYQVIEGDTLWDIANKFLKDPFRWKELWQQNPGIKNPDKIYIGDVIKVI 4134
>gi|387929626|ref|ZP_10132303.1| polysaccharide deacetylase [Bacillus methanolicus PB1]
gi|387586444|gb|EIJ78768.1| polysaccharide deacetylase [Bacillus methanolicus PB1]
Length = 325
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 54 MRPGNQLLNRRPCDEIYVVGEGETLHTISDKCGDPF--IVERNPHIHDPDDVFPGLVIKI 111
++PG +L P Y V G+T + IS K G + NP I DP +FPG V+ I
Sbjct: 61 IKPGEKL--EVPASSTYKVISGDTFYKISVKLGVSMSELKLANPQIKDPARIFPGQVVNI 118
Query: 112 ISPSTPR 118
+ R
Sbjct: 119 PDKTQTR 125
>gi|262375685|ref|ZP_06068917.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
gi|262309288|gb|EEY90419.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
Length = 164
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 51 DHVMRPGNQLL--NRRPCDEIYVVGEGETLHTISDKC-GDP----FIVERN-PHIHDPDD 102
DHV + +QL + P + Y V G++L IS + GD I E N P + D DD
Sbjct: 94 DHVAKVDDQLTVSSPEPESKFYTVKSGDSLSKISKEFYGDANQYNKIFEANRPLLKDADD 153
Query: 103 VFPGLVIKI 111
+FPG V++I
Sbjct: 154 IFPGQVLRI 162
>gi|403379245|ref|ZP_10921302.1| peptidoglycan-binding LysM [Paenibacillus sp. JC66]
Length = 731
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 69 IYVVGEGETLHTISDKCGDPF--IVERNPHIHDPDDVFPGLVIKIISPS 115
I++V +G+TL+ +S K P ++E NP I DPD + G+ +K+ S S
Sbjct: 3 IHIVKKGDTLYQLSKKYNVPLDKLIEMNPQIADPDKLDIGMKVKVPSTS 51
>gi|297544613|ref|YP_003676915.1| spore coat assembly protein SafA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842388|gb|ADH60904.1| spore coat assembly protein SafA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 199
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 14/86 (16%)
Query: 38 IRGNSLADEPHDYDHVMRPGNQL--------LNRRPCDEIYVVGEGETLHTISDKCGDPF 89
IR N +P+ ++ PG Q+ ++ C IY V G+T+ +I++ G
Sbjct: 117 IRANPQISDPN----LIYPGQQICIPFYCPPVSPETCKTIYTVKPGDTMWSIANMFGVSL 172
Query: 90 --IVERNPHIHDPDDVFPGLVIKIIS 113
++ NP I DP+ ++PG I I S
Sbjct: 173 DALIRANPQISDPNLIYPGQQICIPS 198
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Query: 66 CDEIYVVGEGETLHTISDKCGDPF--IVERNPHIHDPDDVFPGLVIKI------ISPSTP 117
C IY V G+T+ +I++ G ++ NP I DP+ ++PG I I +SP T
Sbjct: 90 CKTIYTVKPGDTMWSIANMFGISLDCLIRANPQISDPNLIYPGQQICIPFYCPPVSPETC 149
Query: 118 RKL 120
+ +
Sbjct: 150 KTI 152
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 66 CDEIYVVGEGETLHTISDKCGDPF--IVERNPHIHDPDDVFPGLVIKI 111
C Y V G+T+ +I++K G ++ NP I DP+ ++PG I I
Sbjct: 31 CRTFYTVQPGDTMWSIANKFGVSLDCLIRANPQISDPNLIYPGQRICI 78
>gi|289578334|ref|YP_003476961.1| spore coat assembly protein SafA [Thermoanaerobacter italicus Ab9]
gi|289528047|gb|ADD02399.1| spore coat assembly protein SafA [Thermoanaerobacter italicus Ab9]
Length = 199
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 14/86 (16%)
Query: 38 IRGNSLADEPHDYDHVMRPGNQL--------LNRRPCDEIYVVGEGETLHTISDKCGDPF 89
IR N +P+ ++ PG Q+ ++ C IY V G+T+ +I++ G
Sbjct: 117 IRANPQISDPN----LIYPGQQICIPFYCPPVSPETCKTIYTVKPGDTMWSIANMFGVSL 172
Query: 90 --IVERNPHIHDPDDVFPGLVIKIIS 113
++ NP I DP+ ++PG I I S
Sbjct: 173 DALIRANPQISDPNLIYPGQQICIPS 198
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Query: 66 CDEIYVVGEGETLHTISDKCGDPF--IVERNPHIHDPDDVFPGLVIKI------ISPSTP 117
C IY V G+T+ +I++ G ++ NP I DP+ ++PG I I +SP T
Sbjct: 90 CKTIYTVKPGDTMWSIANMFGISLDCLIRANPQISDPNLIYPGQQICIPFYCPPVSPETC 149
Query: 118 RKL 120
+ +
Sbjct: 150 KTI 152
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 66 CDEIYVVGEGETLHTISDKCGDPF--IVERNPHIHDPDDVFPGLVIKI 111
C Y V G+T+ +I++K G ++ NP I DP+ ++PG I I
Sbjct: 31 CRTFYTVQPGDTMWSIANKFGISLDCLIRANPQISDPNLIYPGQRICI 78
>gi|359429008|ref|ZP_09220036.1| putative mannose-binding protein [Acinetobacter sp. NBRC 100985]
gi|358235589|dbj|GAB01575.1| putative mannose-binding protein [Acinetobacter sp. NBRC 100985]
Length = 157
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 51 DHVMRPGNQLLNRRPCDE--IYVVGEGETLHTISDKC-GD----PFIVERN-PHIHDPDD 102
DHV + +Q+ P E Y V G+ L IS + GD P I E N P + PD+
Sbjct: 87 DHVAQVDDQMTVETPEPESKFYTVKSGDNLSKISKEMYGDANQYPKIFEANKPMLKSPDE 146
Query: 103 VFPGLVIKI 111
+FPG V++I
Sbjct: 147 IFPGQVLRI 155
>gi|406040195|ref|ZP_11047550.1| LysM domain/BON superfamily protein [Acinetobacter ursingii DSM
16037 = CIP 107286]
Length = 155
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 51 DHVMRPGNQLLNRRPCDE--IYVVGEGETLHTISDKC-GDP----FIVERN-PHIHDPDD 102
DHV + +Q+ P E Y V G+ L IS + GDP I E N P + D DD
Sbjct: 85 DHVAKVDDQMTVETPEPESKFYTVKSGDNLSKISKEYYGDPNQYNKIFEANKPLLKDADD 144
Query: 103 VFPGLVIKI 111
++PG V++I
Sbjct: 145 IYPGQVLRI 153
>gi|407008650|gb|EKE23977.1| hypothetical protein ACD_6C00276G0001 [uncultured bacterium]
Length = 164
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 51 DHVMRPGNQLL--NRRPCDEIYVVGEGETLHTISDKC-GDP----FIVERN-PHIHDPDD 102
DHV + +QL + P + Y V G++L IS + GD I E N P + D DD
Sbjct: 94 DHVAKVDDQLTVSSPEPESKFYTVKSGDSLSKISKEFYGDANQYNKIFEANRPLLKDADD 153
Query: 103 VFPGLVIKI 111
+FPG V++I
Sbjct: 154 IFPGQVLRI 162
>gi|294649557|ref|ZP_06726977.1| LysM domain protein [Acinetobacter haemolyticus ATCC 19194]
gi|292824544|gb|EFF83327.1| LysM domain protein [Acinetobacter haemolyticus ATCC 19194]
Length = 157
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 51 DHVMRPGNQLL--NRRPCDEIYVVGEGETLHTISDKC-GDP----FIVERN-PHIHDPDD 102
DHV + +Q+ P + Y V G+ L IS + GDP I E N P + + DD
Sbjct: 87 DHVAQADDQMTVETAEPESKFYTVKSGDNLSKISKEYYGDPNQYNKIFEANRPLLKNADD 146
Query: 103 VFPGLVIKI 111
+FPG V++I
Sbjct: 147 IFPGQVLRI 155
>gi|302390755|ref|YP_003826576.1| peptidase M23 [Thermosediminibacter oceani DSM 16646]
gi|302201383|gb|ADL08953.1| Peptidase M23 [Thermosediminibacter oceani DSM 16646]
Length = 451
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 58 NQLLNRRPCDEIYVVGEGETLHTISDKCGDPF--IVERNPHIHDPDDVFPGLVI 109
N +LN + VG+GE L +I+ K G F ++E NP + D + PG VI
Sbjct: 180 NLILNGTTETRTHTVGQGENLWSIAQKKGISFNELIEANPQLKSADSISPGDVI 233
>gi|421858668|ref|ZP_16290931.1| predicted glycosyl hydrolase [Paenibacillus popilliae ATCC 14706]
gi|410831737|dbj|GAC41368.1| predicted glycosyl hydrolase [Paenibacillus popilliae ATCC 14706]
Length = 506
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 68 EIYVVGEGETLHTISDKCGDPF--IVERNPHIHDPDDVFPGLVIKIISPSTPR 118
+I++V GE+L++IS K P +++ NP + DP+ + G+ IK+ S S P+
Sbjct: 2 KIHIVKNGESLYSISQKYDVPLEKLLKMNPQLQDPNKIDVGMKIKVPSSSHPQ 54
>gi|424745942|ref|ZP_18174201.1| LysM domain protein [Acinetobacter baumannii WC-141]
gi|422941761|gb|EKU36826.1| LysM domain protein [Acinetobacter baumannii WC-141]
Length = 157
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 51 DHVMRPGNQLL--NRRPCDEIYVVGEGETLHTISDKC-GD----PFIVERN-PHIHDPDD 102
DHV +Q+ P + Y V G+ L I+ + GD P I E N P + DPD+
Sbjct: 87 DHVAHVDDQMTVATPEPESKFYTVKSGDNLSKIAKEVYGDANQYPKIFEANKPMLKDPDE 146
Query: 103 VFPGLVIKI 111
+FPG V++I
Sbjct: 147 IFPGQVLRI 155
>gi|354558962|ref|ZP_08978215.1| Peptidoglycan-binding lysin domain protein [Desulfitobacterium
metallireducens DSM 15288]
gi|353545286|gb|EHC14738.1| Peptidoglycan-binding lysin domain protein [Desulfitobacterium
metallireducens DSM 15288]
Length = 47
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 72 VGEGETLHTISDKCGDPF--IVERNPHIHDPDDVFPGLVIKI 111
V GE+LH I+ + G ++ NPHI++P+ ++PG I+I
Sbjct: 5 VRRGESLHKIAKRYGTTVHCLIRINPHIYNPNLIYPGQKIQI 46
>gi|222054653|ref|YP_002537015.1| Peptidoglycan-binding LysM [Geobacter daltonii FRC-32]
gi|221563942|gb|ACM19914.1| Peptidoglycan-binding LysM [Geobacter daltonii FRC-32]
Length = 332
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 5/48 (10%)
Query: 69 IYVVGEGETLHTISDK-CGDPF----IVERNPHIHDPDDVFPGLVIKI 111
+YV+ +G+TL +SD+ DPF + ERN I +P VFPG +KI
Sbjct: 29 VYVIQKGDTLWGLSDRFIRDPFYWPNLWERNQVITNPHFVFPGQRVKI 76
>gi|389707909|ref|ZP_10186549.1| LysM domain/BON superfamily protein [Acinetobacter sp. HA]
gi|388610528|gb|EIM39648.1| LysM domain/BON superfamily protein [Acinetobacter sp. HA]
Length = 168
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 51 DHVMRPGNQLL--NRRPCDEIYVVGEGETLHTISDKC-GDP----FIVERN-PHIHDPDD 102
DHV + +QL + P + Y V G++L IS + GD I E N P + D DD
Sbjct: 98 DHVAKVDDQLTVSSPEPESKFYTVKSGDSLSKISKEFYGDANQYNKIFEANRPLLKDADD 157
Query: 103 VFPGLVIKI 111
+FPG V++I
Sbjct: 158 IFPGQVLRI 166
>gi|381210477|ref|ZP_09917548.1| hypothetical protein LGrbi_11166 [Lentibacillus sp. Grbi]
Length = 310
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 69 IYVVGEGETLHTISDKCGDPF--IVERNPHIHDPDDVFPGLVIKIISPSTPRK 119
I++V +G+TL I+ + G F + + NP + PD + PG+ IKI + S P K
Sbjct: 3 IHIVQKGDTLWEIAKQYGADFEQVKQLNPQLSSPDMIMPGMKIKIPASSKPVK 55
>gi|260550962|ref|ZP_05825167.1| LysM domain-containing protein [Acinetobacter sp. RUH2624]
gi|424056726|ref|ZP_17794243.1| hypothetical protein W9I_00052 [Acinetobacter nosocomialis Ab22222]
gi|425740252|ref|ZP_18858426.1| LysM domain protein [Acinetobacter baumannii WC-487]
gi|445432712|ref|ZP_21439385.1| LysM domain protein [Acinetobacter baumannii OIFC021]
gi|260405910|gb|EEW99397.1| LysM domain-containing protein [Acinetobacter sp. RUH2624]
gi|407440259|gb|EKF46776.1| hypothetical protein W9I_00052 [Acinetobacter nosocomialis Ab22222]
gi|425495019|gb|EKU61209.1| LysM domain protein [Acinetobacter baumannii WC-487]
gi|444758050|gb|ELW82552.1| LysM domain protein [Acinetobacter baumannii OIFC021]
Length = 157
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 51 DHVMRPGNQLL--NRRPCDEIYVVGEGETLHTISDKC-GD----PFIVERN-PHIHDPDD 102
DHV +Q+ P + Y V G+ L I+ + GD P I E N P + DPD+
Sbjct: 87 DHVAHVDDQMTVATPEPESKFYTVKSGDNLSKIAKEFYGDANQYPKIFEANKPMLKDPDE 146
Query: 103 VFPGLVIKI 111
+FPG V++I
Sbjct: 147 IFPGQVLRI 155
>gi|376316933|emb|CCG00311.1| BON and LysM domain containing protein [uncultured Flavobacteriia
bacterium]
Length = 164
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 16/86 (18%)
Query: 32 LILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCDEIYVVGEGETLHTISDKC-GD--- 87
++++G++ G + D+ + +H + P + + V G+TL I+ K G+
Sbjct: 85 VLVVGNVEGIAQVDDRLEVEH----------KEPEAQFHTVESGDTLSKIAKKFYGNAMK 134
Query: 88 -PFIVERN-PHIHDPDDVFPGLVIKI 111
P I E N P + DPD ++PG +++I
Sbjct: 135 YPVIFEANKPMLKDPDKIYPGQMLRI 160
>gi|333896232|ref|YP_004470106.1| peptidoglycan-binding lysin domain protein [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333111497|gb|AEF16434.1| Peptidoglycan-binding lysin domain protein [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 291
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 60 LLNRRPCDEIYVVGEGETLHTISDKCGDPF-IVERNPHIHDPDDVFPGLVIKIISP 114
L+ PC Y+V G+TL +I++K G P + R + DP+ ++PG + I P
Sbjct: 133 LMYNMPCPTNYIVQPGDTLWSIANKFGVPLDEILRANYFMDPNMIYPGQTVVIPCP 188
>gi|94499925|ref|ZP_01306461.1| hypothetical protein RED65_15427 [Bermanella marisrubri]
gi|94428126|gb|EAT13100.1| hypothetical protein RED65_15427 [Oceanobacter sp. RED65]
Length = 354
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Query: 59 QLLNRRPCDEIYVVGEGETLHTISDKCGD-----PFIVERNPHIHDPDDVFPGLVIKII 112
QL N P E YVV EG+TL IS+K D P I + N I +P ++PG VI ++
Sbjct: 26 QLKNGHP--EEYVVQEGDTLWGISNKFLDDPWLWPEIWQVNEQIENPHLIYPGDVIGLV 82
>gi|167037559|ref|YP_001665137.1| peptidoglycan-binding LysM [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|320115974|ref|YP_004186133.1| spore coat assembly protein SafA [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166856393|gb|ABY94801.1| Peptidoglycan-binding LysM [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|319929065|gb|ADV79750.1| spore coat assembly protein SafA [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 142
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 14/86 (16%)
Query: 38 IRGNSLADEPHDYDHVMRPGNQL--------LNRRPCDEIYVVGEGETLHTISDKCGDPF 89
IR N +P+ ++ PG Q+ ++ C IY V G+T+ +I++ G
Sbjct: 58 IRANPQISDPN----LIYPGQQICIPFYCPPVSPETCKTIYTVKPGDTMWSIANMFGVSL 113
Query: 90 --IVERNPHIHDPDDVFPGLVIKIIS 113
++ NP I DP+ ++PG I I S
Sbjct: 114 DALIRANPQIPDPNLIYPGQQICIPS 139
>gi|392393585|ref|YP_006430187.1| Mn-containing catalase [Desulfitobacterium dehalogenans ATCC 51507]
gi|390524663|gb|AFM00394.1| Mn-containing catalase [Desulfitobacterium dehalogenans ATCC 51507]
Length = 222
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 70 YVVGEGETLHTISDKCGDPF--IVERNPHIHDPDDVFPGLVIKIISPSTPR 118
Y V G+T + I+ K G + + NP I +P +FPG VIK+ S P+
Sbjct: 3 YTVQPGDTFYLIAQKHGLSLEELQQANPQIQNPTLIFPGQVIKLPDKSRPQ 53
>gi|50084084|ref|YP_045594.1| LysM domain/BON superfamily protein [Acinetobacter sp. ADP1]
gi|49530060|emb|CAG67772.1| conserved hypothetical protein; putative peptidoglycan-binding LysM
[Acinetobacter sp. ADP1]
Length = 158
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 51 DHVMRPGNQLLNRRPCDE--IYVVGEGETLHTISDKC-GDP----FIVERN-PHIHDPDD 102
DHV + +Q+ P E Y V G+ L IS + GDP I E N P + D DD
Sbjct: 86 DHVAKVDDQMTVETPEPESKFYTVKAGDNLSKISKEYYGDPNHYNKIFEANKPLLKDADD 145
Query: 103 VFPGLVIKI 111
++PG V++I
Sbjct: 146 IYPGQVLRI 154
>gi|406864398|gb|EKD17443.1| hypothetical protein MBM_04304 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1774
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 52 HVMRPGNQLLNRRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI 111
HV P L + RPCDE+ + G+ + DKCG+ + + +++P +++P ++
Sbjct: 631 HVHDPTYGLDSERPCDELRLTGDNPFVDFDLDKCGN--VPTKKCEVNEPQEIYPQRTLRH 688
Query: 112 I 112
I
Sbjct: 689 I 689
>gi|326390436|ref|ZP_08211994.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
ethanolicus JW 200]
gi|325993554|gb|EGD51988.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
ethanolicus JW 200]
Length = 327
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 63 RRPCDEIYVVGEGETLHTISDKCGDPF--IVERNPHIHDPDDVFPGLVIKIISPSTP 117
++PC Y V G+TL TI+ K G +++ N ++ +P+ ++PG ++ I P++P
Sbjct: 118 QKPCPTYYTVQPGDTLWTIAQKFGVSLEELIKAN-YLINPNMIYPGQILIIPCPTSP 173
>gi|392963822|ref|ZP_10329243.1| Peptidoglycan-binding lysin domain protein [Fibrisoma limi BUZ 3]
gi|387846717|emb|CCH51287.1| Peptidoglycan-binding lysin domain protein [Fibrisoma limi BUZ 3]
Length = 157
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 16/85 (18%)
Query: 33 ILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCDEIYVVGEGETLHTISDKC-GDPF-- 89
+ +G++ G D + HV+ P P + Y V EG+TL IS + GDP
Sbjct: 80 LAVGNVEGVHTVD---NQLHVVTPA-------PEGKYYTVKEGDTLSKISKEVYGDPMKY 129
Query: 90 --IVERN-PHIHDPDDVFPGLVIKI 111
I E N P + DPD ++P V++I
Sbjct: 130 GIIFEANKPMLKDPDLIYPNQVLRI 154
>gi|24414012|dbj|BAC22262.1| hypothetical protein [Oryza sativa Japonica Group]
gi|50509890|dbj|BAD30170.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 224
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 64 RPCDEIYVVGEGETLHTIS 82
+PC+E+YVVGE E LHTIS
Sbjct: 38 KPCEEVYVVGEDEMLHTIS 56
>gi|398809361|ref|ZP_10568211.1| membrane-bound metallopeptidase [Variovorax sp. CF313]
gi|398085836|gb|EJL76478.1| membrane-bound metallopeptidase [Variovorax sp. CF313]
Length = 242
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 70 YVVGEGETLHTISDKCG-DPFIVERNPHIHDPDDVFPGLVIKIISPS 115
YVV G+TL+ I+ K G P V R ++ DPD + G V++++ P
Sbjct: 37 YVVQPGDTLYRIASKAGRSPGEVARWNNLQDPDRLEAGQVLRVVPPG 83
>gi|302660445|ref|XP_003021902.1| hypothetical protein TRV_03991 [Trichophyton verrucosum HKI 0517]
gi|291185821|gb|EFE41284.1| hypothetical protein TRV_03991 [Trichophyton verrucosum HKI 0517]
Length = 468
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 7 TRGAASSSATLADAA-SWYCAIVILALILIGSIRGNSLADEPHDY-DHVM---RPGNQLL 61
RG + AD A +W C IV+ L L+G+ +S DE +++ D+V RP ++L
Sbjct: 131 NRGHSKGQGYRADIADAWSCGIVLFVL-LVGNTPWDSPTDESYEFCDYVKSNSRPSDELW 189
Query: 62 NRRPCDEIYVVG-----EGETLHTISDKCGDPFIVERNPHIHD 99
N P D + ++ + + ++D P+ +N H+ D
Sbjct: 190 NDIPSDALSLLRGMLKLDVNSRFNMADIRRHPWFTRQNKHLVD 232
>gi|296133213|ref|YP_003640460.1| peptidoglycan-binding lysin domain-containing protein [Thermincola
potens JR]
gi|296031791|gb|ADG82559.1| Peptidoglycan-binding lysin domain protein [Thermincola potens JR]
Length = 90
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 70 YVVGEGETLHTISDKCGDPF--IVERNPHIHDPDDVFPGLVIKI 111
YVV G+TL+ I+ + G I+ NP I DP+ +FPG VI I
Sbjct: 3 YVVKPGDTLYIIAQRFGVTVADILAVNPQIRDPNLIFPGQVIII 46
>gi|425743539|ref|ZP_18861617.1| LysM domain protein [Acinetobacter baumannii WC-323]
gi|425493747|gb|EKU59973.1| LysM domain protein [Acinetobacter baumannii WC-323]
Length = 157
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 51 DHVMRPGNQLLNRRPCDE--IYVVGEGETLHTISDKC-GDP----FIVERN-PHIHDPDD 102
DHV + +Q+ P E Y V G+ L IS + GDP I E N P + + DD
Sbjct: 87 DHVAKVDDQMTVETPEPESKFYTVKSGDNLSKISKEYYGDPNQYNKIFEANRPLLKNADD 146
Query: 103 VFPGLVIKI 111
+FPG V++I
Sbjct: 147 IFPGQVLRI 155
>gi|327308820|ref|XP_003239101.1| CAMK/CAMKL/CHK1 protein kinase [Trichophyton rubrum CBS 118892]
gi|326459357|gb|EGD84810.1| CAMK/CAMKL/CHK1 protein kinase [Trichophyton rubrum CBS 118892]
Length = 533
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 7 TRGAASSSATLADAA-SWYCAIVILALILIGSIRGNSLADEPHDY-DHVM---RPGNQLL 61
RG + AD A +W C IV+ L L+G+ +S DE +++ D+V RP ++L
Sbjct: 196 NRGHSKGQGYRADIADAWSCGIVLFVL-LVGNTPWDSPTDESYEFCDYVKSNSRPSDELW 254
Query: 62 NRRPCDEIYVVG-----EGETLHTISDKCGDPFIVERNPHIHD 99
N P D + ++ + + ++D P+ +N H+ D
Sbjct: 255 NDIPSDALSLLRGMLKLDVNSRFNMADIRRHPWFTRQNKHLVD 297
>gi|404495749|ref|YP_006719855.1| LysM domain-containing protein [Geobacter metallireducens GS-15]
gi|418066395|ref|ZP_12703759.1| Peptidoglycan-binding lysin domain protein [Geobacter
metallireducens RCH3]
gi|78193364|gb|ABB31131.1| LysM domain protein [Geobacter metallireducens GS-15]
gi|373560656|gb|EHP86913.1| Peptidoglycan-binding lysin domain protein [Geobacter
metallireducens RCH3]
Length = 333
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 38/109 (34%)
Query: 25 CAIVILALILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCDEIYVVGEGETLHTISDK 84
C ++ AL+ +G++R S +EP IYV+ +G+TL +SD+
Sbjct: 9 CMLLAGALLTVGTVRAAS--EEPT--------------------IYVIQKGDTLWGLSDR 46
Query: 85 -CGDPF----IVERNPHIHDPDDVFPGLVIKI-----------ISPSTP 117
DP+ + RNP I +P ++PG +++ +SP TP
Sbjct: 47 FLKDPYYWPNLWARNPAIGNPHFIYPGQRVRVYPDRIEIEPRTVSPGTP 95
>gi|326469488|gb|EGD93497.1| CAMK/CAMKL/CHK1 protein kinase [Trichophyton tonsurans CBS 112818]
gi|326484404|gb|EGE08414.1| CAMK/CAMKL/CHK1 protein kinase [Trichophyton equinum CBS 127.97]
Length = 533
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 7 TRGAASSSATLADAA-SWYCAIVILALILIGSIRGNSLADEPHDY-DHVM---RPGNQLL 61
RG + AD A +W C IV+ L L+G+ +S DE +++ D+V RP ++L
Sbjct: 196 NRGHSKGQGYRADIADAWSCGIVLFVL-LVGNTPWDSPTDESYEFCDYVKSNSRPSDELW 254
Query: 62 NRRPCDEIYVVG-----EGETLHTISDKCGDPFIVERNPHIHD 99
N P D + ++ + + ++D P+ +N H+ D
Sbjct: 255 NDIPSDALSLLRGMLKLDVNSRFNMADIRRHPWFTRQNKHLVD 297
>gi|354559573|ref|ZP_08978820.1| Xanthine dehydrogenase [Desulfitobacterium metallireducens DSM
15288]
gi|353541210|gb|EHC10679.1| Xanthine dehydrogenase [Desulfitobacterium metallireducens DSM
15288]
Length = 397
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 70 YVVGEGETLHTISDKCGDPF--IVERNPHIHDPDDVFPGLVIKI 111
Y + G++ + I+ K P ++ NP I DP+ +FPG +I I
Sbjct: 178 YTIQPGDSFYIIAQKYNIPLNELIRANPQIDDPEHIFPGQIINI 221
>gi|359444320|ref|ZP_09234112.1| lipoprotein NlpD [Pseudoalteromonas sp. BSi20439]
gi|358041817|dbj|GAA70361.1| lipoprotein NlpD [Pseudoalteromonas sp. BSi20439]
Length = 274
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 70 YVVGEGETLHTISDKCGDPFI-VERNPHIHDPDDVFPGLVIKIISPSTPR 118
Y V +G+TL++I+ G F + +N I P + PG V+ I+ PS R
Sbjct: 50 YTVQKGDTLYSIAFSAGKDFRELAKNNSIPSPYTIVPGQVVSILEPSRSR 99
>gi|20808596|ref|NP_623767.1| LysM repeat-containing protein [Thermoanaerobacter tengcongensis
MB4]
gi|254479061|ref|ZP_05092416.1| LysM domain protein [Carboxydibrachium pacificum DSM 12653]
gi|20517226|gb|AAM25371.1| LysM-repeat proteins and domains [Thermoanaerobacter tengcongensis
MB4]
gi|214035017|gb|EEB75736.1| LysM domain protein [Carboxydibrachium pacificum DSM 12653]
Length = 324
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 68 EIYVVGEGETLHTISDKCGDPF--IVERNPHIHDPDDVFPGLVIKIISPST 116
++Y+V GE+L TI+ K I++ NP I DP+ ++PG +II P++
Sbjct: 254 KVYIVKPGESLWTIAQKFNTTVEAILKANPEIKDPNLIYPGQ--RIIIPTS 302
>gi|315053969|ref|XP_003176359.1| CAMK/CAMKL/CHK1 protein kinase [Arthroderma gypseum CBS 118893]
gi|311338205|gb|EFQ97407.1| CAMK/CAMKL/CHK1 protein kinase [Arthroderma gypseum CBS 118893]
Length = 533
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 11/109 (10%)
Query: 7 TRGAASSSATLADAA-SWYCAIVILALILIGSIRGNSLADEPHDY-DHVM---RPGNQLL 61
RG + AD A +W C IV+ L L+G+ +S DE +++ D+V RP ++L
Sbjct: 196 NRGHSKGQGYRADIADAWSCGIVLFVL-LVGNTPWDSPTDESYEFCDYVKSNSRPSDELW 254
Query: 62 NRRPCDEIYVVG-----EGETLHTISDKCGDPFIVERNPHIHDPDDVFP 105
N P D + ++ + + I D P+ +N H D V P
Sbjct: 255 NDIPSDALSLLRGMLKLDVNSRFNIDDIRRHPWFTRQNKHYVDGKLVNP 303
>gi|359298787|ref|ZP_09184626.1| LysM domain/BON superfamily protein [Haemophilus [parainfluenzae]
CCUG 13788]
gi|402306989|ref|ZP_10826022.1| LysM domain protein [Haemophilus sputorum HK 2154]
gi|400373833|gb|EJP26760.1| LysM domain protein [Haemophilus sputorum HK 2154]
Length = 147
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 67 DEIYVVGEGETLHTISDKC---GDPF--IVERNPH-IHDPDDVFPGLVIKI 111
DE YV+ +G+TL IS+K G + IV+ N I D D +FPG I+I
Sbjct: 93 DEFYVIEKGDTLWKISEKAYGNGAKYTAIVDANKEVIKDADKIFPGQKIRI 143
>gi|392941010|ref|ZP_10306654.1| spore coat assembly protein SafA [Thermoanaerobacter siderophilus
SR4]
gi|392292760|gb|EIW01204.1| spore coat assembly protein SafA [Thermoanaerobacter siderophilus
SR4]
Length = 199
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 20/99 (20%)
Query: 38 IRGNSLADEPHDYDHVMRPGNQL--------LNRRPCDEIYVVGEGETLHTISDKCGDPF 89
IR N +P+ ++ PG Q+ ++ C IY V G+++ +I++ G
Sbjct: 58 IRANPQISDPN----LIYPGQQICIPFYCPPVSPETCKTIYTVKPGDSMWSIANMFGISL 113
Query: 90 --IVERNPHIHDPDDVFPGLVIKI------ISPSTPRKL 120
++ NP I DP+ ++PG I I +SP T + +
Sbjct: 114 DCLIRANPQISDPNLIYPGQQICIPFYCPPVSPETCKTI 152
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 14/86 (16%)
Query: 38 IRGNSLADEPHDYDHVMRPGNQL--------LNRRPCDEIYVVGEGETLHTISDKCGDPF 89
IR N +P+ ++ PG Q+ ++ C IY V G+++ +I++ G
Sbjct: 117 IRANPQISDPN----LIYPGQQICIPFYCPPVSPETCKTIYTVKPGDSMWSIANMFGVSL 172
Query: 90 --IVERNPHIHDPDDVFPGLVIKIIS 113
++ NP I DP+ ++PG I I S
Sbjct: 173 DALIRANPQIPDPNLIYPGQQICIPS 198
>gi|256752037|ref|ZP_05492905.1| spore coat assembly protein SafA [Thermoanaerobacter ethanolicus
CCSD1]
gi|256749047|gb|EEU62083.1| spore coat assembly protein SafA [Thermoanaerobacter ethanolicus
CCSD1]
Length = 142
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 14/86 (16%)
Query: 38 IRGNSLADEPHDYDHVMRPGNQL--------LNRRPCDEIYVVGEGETLHTISDKCGDPF 89
IR N +P+ ++ PG Q+ + C IY V G+T+ +I++ G
Sbjct: 58 IRANPQISDPN----LIYPGQQICIPFYCPPVAPETCKTIYTVKPGDTMWSIANMFGVSL 113
Query: 90 --IVERNPHIHDPDDVFPGLVIKIIS 113
++ NP I DP+ ++PG I I S
Sbjct: 114 DALIRANPQIPDPNLIYPGQQICIPS 139
>gi|326391085|ref|ZP_08212632.1| spore coat assembly protein SafA [Thermoanaerobacter ethanolicus JW
200]
gi|325992870|gb|EGD51315.1| spore coat assembly protein SafA [Thermoanaerobacter ethanolicus JW
200]
Length = 199
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 14/84 (16%)
Query: 38 IRGNSLADEPHDYDHVMRPGNQL--------LNRRPCDEIYVVGEGETLHTISDKCGDPF 89
IR N +P+ ++ PG Q+ ++ C IY V G+++ +I++ G
Sbjct: 58 IRANPQISDPN----LIYPGQQICIPFYCPPVSPETCKTIYTVKPGDSMWSIANMFGISL 113
Query: 90 --IVERNPHIHDPDDVFPGLVIKI 111
++ NP I DP+ ++PG I I
Sbjct: 114 DCLIRANPQISDPNLIYPGQQICI 137
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 14/86 (16%)
Query: 38 IRGNSLADEPHDYDHVMRPGNQL--------LNRRPCDEIYVVGEGETLHTISDKCGDPF 89
IR N +P+ ++ PG Q+ ++ C IY V G+++ +I++ G
Sbjct: 117 IRANPQISDPN----LIYPGQQICIPFYCPPVSPEACKTIYTVKPGDSMWSIANMFGVSL 172
Query: 90 --IVERNPHIHDPDDVFPGLVIKIIS 113
++ NP I DP+ ++PG I I S
Sbjct: 173 DALIRANPQIPDPNLIYPGQQICIPS 198
>gi|255020221|ref|ZP_05292290.1| Uncharacterized protein with LysM domain [Acidithiobacillus caldus
ATCC 51756]
gi|340780757|ref|YP_004747364.1| hypothetical protein Atc_0014 [Acidithiobacillus caldus SM-1]
gi|254970363|gb|EET27856.1| Uncharacterized protein with LysM domain [Acidithiobacillus caldus
ATCC 51756]
gi|340554911|gb|AEK56665.1| Uncharacterized protein with LysM domain [Acidithiobacillus caldus
SM-1]
Length = 348
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 5/44 (11%)
Query: 68 EIYVVGEGETL-----HTISDKCGDPFIVERNPHIHDPDDVFPG 106
++YVV G+TL H + + P + RNP IH+P+ ++PG
Sbjct: 36 QVYVVRPGDTLWGIAAHFLKNPWDWPLLWRRNPAIHNPNLIYPG 79
>gi|120437751|ref|YP_863437.1| LysM domain/BON superfamily protein [Gramella forsetii KT0803]
gi|117579901|emb|CAL68370.1| peptidoglycan-binding LysM domain containing protein [Gramella
forsetii KT0803]
Length = 162
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 16/86 (18%)
Query: 32 LILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCDEIYVVGEGETLHTISDK-CGDP-- 88
++++G+ G + D+ D + N P + V G+TL IS + GDP
Sbjct: 80 ILVVGNSEGIAQVDDKMDVE----------NTEPEAVFHTVERGDTLSKISKEHYGDPNQ 129
Query: 89 --FIVERN-PHIHDPDDVFPGLVIKI 111
I E N P + DPD ++PG V++I
Sbjct: 130 YPLIFEANKPMLQDPDKIYPGQVLRI 155
>gi|256828566|ref|YP_003157294.1| peptidoglycan-binding LysM [Desulfomicrobium baculatum DSM 4028]
gi|256577742|gb|ACU88878.1| Peptidoglycan-binding LysM [Desulfomicrobium baculatum DSM 4028]
Length = 577
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 13/99 (13%)
Query: 27 IVILALILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCDEIYVVGEGETLHTISDKCG 86
++ILAL + SI +++P + N + ++P DE ++V +GE L+ I + G
Sbjct: 6 LLILALCFLTSITKPGFSEKPL---RLFFEKNIRVEQKPGDE-HIVKQGEWLYKILESKG 61
Query: 87 D---------PFIVERNPHIHDPDDVFPGLVIKIISPST 116
P I NPHI D + + PG VI+I S+
Sbjct: 62 YSATQIQRILPDITALNPHIPDINRLMPGQVIQIPEASS 100
>gi|345018480|ref|YP_004820833.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344033823|gb|AEM79549.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 327
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 63 RRPCDEIYVVGEGETLHTISDKCGDPF--IVERNPHIHDPDDVFPGLVIKIISPSTP 117
++PC Y V G+TL TI+ K G +++ N ++ +P+ ++PG + I P++P
Sbjct: 118 QKPCPTYYTVQPGDTLWTIAQKFGVSLEELIKAN-YLVNPNMIYPGQTLIIPCPTSP 173
>gi|256752566|ref|ZP_05493421.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
ethanolicus CCSD1]
gi|256748563|gb|EEU61612.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
ethanolicus CCSD1]
Length = 327
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 63 RRPCDEIYVVGEGETLHTISDKCGDPF--IVERNPHIHDPDDVFPGLVIKIISPSTP 117
++PC Y V G+TL TI+ K G +++ N ++ +P+ ++PG + I P++P
Sbjct: 118 QKPCPTYYTVQPGDTLWTIAQKFGVSLEELIKAN-YLINPNMIYPGQTLIIPCPTSP 173
>gi|148910787|gb|ABR18460.1| unknown [Picea sitchensis]
Length = 777
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 59 QLLNRRPCDEIYVVGEGETLHTISDKCGD---PFIVERNPHIHDPDDVFPGLVIKI 111
Q +R+P D + V +G+TL IS + G +V+ NP I++PD ++PG +K+
Sbjct: 723 QTSSRKPKD--FEVKKGDTLSQISKRVGKSSWKELVQLNPEINNPDLIYPGDRLKL 776
>gi|167036871|ref|YP_001664449.1| peptidoglycan binding domain-containing protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|167039577|ref|YP_001662562.1| peptidoglycan binding domain-containing protein [Thermoanaerobacter
sp. X514]
gi|300915173|ref|ZP_07132488.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
X561]
gi|307725097|ref|YP_003904848.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
X513]
gi|320115293|ref|YP_004185452.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|166853817|gb|ABY92226.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
X514]
gi|166855705|gb|ABY94113.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|300888897|gb|EFK84044.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
X561]
gi|307582158|gb|ADN55557.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
X513]
gi|319928384|gb|ADV79069.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 327
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 63 RRPCDEIYVVGEGETLHTISDKCGDPF--IVERNPHIHDPDDVFPGLVIKIISPSTP 117
++PC Y V G+TL TI+ K G +++ N ++ +P+ ++PG + I P++P
Sbjct: 118 QKPCPTYYTVQPGDTLWTIAQKFGVSLEELIKAN-YLINPNMIYPGQTLIIPCPTSP 173
>gi|374580317|ref|ZP_09653411.1| putative carboxypeptidase [Desulfosporosinus youngiae DSM 17734]
gi|374416399|gb|EHQ88834.1| putative carboxypeptidase [Desulfosporosinus youngiae DSM 17734]
Length = 350
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 70 YVVGEGETLHTISDKCGDPF--IVERNPHIHDPDDVFPGLVIKIISPSTPRKLL 121
+ V +GETL+ I+ K G +V NP I +P + PG VI I S + R ++
Sbjct: 4 HTVKKGETLYIIAKKYGIDLSSLVSANPTIKNPGMIMPGQVINIPSTAAQRTIV 57
>gi|385813097|ref|YP_005849490.1| DNA-directed RNA polymerase subunit beta' [Lactobacillus helveticus
H10]
gi|323465816|gb|ADX69503.1| DNA-directed RNA polymerase subunit beta' [Lactobacillus helveticus
H10]
Length = 1217
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 47 PHDYDHVMRPGNQLLNRRPCDEIYVVGEGETLHTISDKCGDPFI 90
P DY ++ P + LN P D Y +GEG+ +H D+ GD I
Sbjct: 572 PDDYFYINEPTEENLNN-PLDAKYFLGEGQDIHDKIDEVGDDLI 614
>gi|392939532|ref|ZP_10305176.1| putative glycosyl hydrolase [Thermoanaerobacter siderophilus SR4]
gi|392291282|gb|EIV99725.1| putative glycosyl hydrolase [Thermoanaerobacter siderophilus SR4]
Length = 327
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 63 RRPCDEIYVVGEGETLHTISDKCGDPF--IVERNPHIHDPDDVFPGLVIKIISPSTP 117
++PC Y V G+TL TI+ K G +++ N ++ +P+ ++PG + I P++P
Sbjct: 118 QKPCPTYYTVQPGDTLWTIAQKFGVSLEELIKAN-YLINPNMIYPGQTLIIPCPTSP 173
>gi|163754411|ref|ZP_02161533.1| hypothetical protein KAOT1_15988 [Kordia algicida OT-1]
gi|161325352|gb|EDP96679.1| hypothetical protein KAOT1_15988 [Kordia algicida OT-1]
Length = 169
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 16/86 (18%)
Query: 32 LILIGSIRGNSLADEPHDYDHVMRPGNQLLNRRPCDEIYVVGEGETL-----HTISDKCG 86
++++G+ +G ++ D+ + +H + P + + V +G+TL H +
Sbjct: 89 VLVVGNTQGIAMVDDRMEVEH----------KEPEAQFHTVAKGDTLGKIAKHYYGNAMK 138
Query: 87 DPFIVERN-PHIHDPDDVFPGLVIKI 111
P I E N P + DP+ ++PG V++I
Sbjct: 139 YPVIFEANKPMLKDPNLIYPGQVLRI 164
>gi|345017645|ref|YP_004819998.1| spore coat assembly protein SafA [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344032988|gb|AEM78714.1| spore coat assembly protein SafA [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 140
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 14/86 (16%)
Query: 38 IRGNSLADEPHDYDHVMRPGNQL--------LNRRPCDEIYVVGEGETLHTISDKCGDPF 89
IR N +P+ ++ PG Q+ ++ C IY V G+++ +I++ G
Sbjct: 58 IRANPQISDPN----LIYPGQQICIPFYCPPVSPETCKTIYTVKPGDSMWSIANMFGVSL 113
Query: 90 --IVERNPHIHDPDDVFPGLVIKIIS 113
++ NP I DP+ ++PG I I S
Sbjct: 114 DALIRANPQIPDPNLIYPGQQICIPS 139
>gi|260102349|ref|ZP_05752586.1| DNA-directed RNA polymerase subunit beta prime [Lactobacillus
helveticus DSM 20075]
gi|260083858|gb|EEW67978.1| DNA-directed RNA polymerase subunit beta prime [Lactobacillus
helveticus DSM 20075]
Length = 1208
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 47 PHDYDHVMRPGNQLLNRRPCDEIYVVGEGETLHTISDKCGDPFI 90
P DY ++ P + LN P D Y +GEG+ +H D+ GD I
Sbjct: 563 PDDYFYINEPTEENLNN-PLDAKYFLGEGQDIHDKIDEVGDDLI 605
>gi|167040221|ref|YP_001663206.1| peptidoglycan-binding LysM [Thermoanaerobacter sp. X514]
gi|300914305|ref|ZP_07131621.1| spore coat assembly protein SafA [Thermoanaerobacter sp. X561]
gi|307724459|ref|YP_003904210.1| spore coat assembly protein SafA [Thermoanaerobacter sp. X513]
gi|166854461|gb|ABY92870.1| Peptidoglycan-binding LysM [Thermoanaerobacter sp. X514]
gi|300889240|gb|EFK84386.1| spore coat assembly protein SafA [Thermoanaerobacter sp. X561]
gi|307581520|gb|ADN54919.1| spore coat assembly protein SafA [Thermoanaerobacter sp. X513]
Length = 142
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 14/86 (16%)
Query: 38 IRGNSLADEPHDYDHVMRPGNQL--------LNRRPCDEIYVVGEGETLHTISDKCGDPF 89
IR N +P+ ++ PG Q+ ++ C IY V G+++ +I++ G
Sbjct: 58 IRANPQISDPN----LIYPGQQICIPFYCPPVSPETCKTIYTVKPGDSMWSIANMFGVSL 113
Query: 90 --IVERNPHIHDPDDVFPGLVIKIIS 113
++ NP I DP+ ++PG I I S
Sbjct: 114 DALIRANPQIPDPNLIYPGQQICIPS 139
>gi|288555339|ref|YP_003427274.1| spoVID-dependent spore coat assembly factor SafA [Bacillus
pseudofirmus OF4]
gi|288546499|gb|ADC50382.1| spoVID-dependent spore coat assembly factor SafA [Bacillus
pseudofirmus OF4]
Length = 479
Score = 34.7 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 68 EIYVVGEGETLHTISDKCGDPF--IVERNPHIHDPDDVFPGLVIKIISPSTPRK 119
+I++V +G+TL +S K G F + N + +PD + PG+ IKI S S P K
Sbjct: 2 KIHIVQKGDTLWKLSKKYGVDFEQLKAANTQLSNPDMIMPGMKIKIPSNSVPVK 55
>gi|433654167|ref|YP_007297875.1| putative glycosyl hydrolase [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433292356|gb|AGB18178.1| putative glycosyl hydrolase [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 303
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 65 PCDEIYVVGEGETLHTISDKCG---DPFIVERNPHIHDPDDVFPGLVIKIISPS 115
PC YVV G+TL +IS++ G D I R + DP+ ++PG I I PS
Sbjct: 140 PCPTYYVVQPGDTLWSISNRFGISLDEII--RANYFMDPNMIYPGQTIIIPCPS 191
>gi|417013589|ref|ZP_11946674.1| DNA-directed RNA polymerase subunit beta' [Lactobacillus helveticus
MTCC 5463]
gi|328463473|gb|EGF35124.1| DNA-directed RNA polymerase subunit beta' [Lactobacillus helveticus
MTCC 5463]
Length = 1217
Score = 34.7 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 47 PHDYDHVMRPGNQLLNRRPCDEIYVVGEGETLHTISDKCGDPFI 90
P DY ++ P + LN P D Y +GEG+ +H D+ GD I
Sbjct: 572 PDDYFYINEPTEENLNN-PLDAKYFLGEGQDIHDKIDEVGDDLI 614
>gi|304315986|ref|YP_003851131.1| peptidoglycan-binding lysin domain [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777488|gb|ADL68047.1| Peptidoglycan-binding lysin domain [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 303
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 65 PCDEIYVVGEGETLHTISDKCG---DPFIVERNPHIHDPDDVFPGLVIKIISPS 115
PC YVV G+TL +IS++ G D I R + DP+ ++PG I I PS
Sbjct: 140 PCPTYYVVQPGDTLWSISNRFGISLDEII--RANYFMDPNMIYPGQTIIIPCPS 191
>gi|403514307|ref|YP_006655127.1| DNA-directed RNA polymerase subunit beta' [Lactobacillus helveticus
R0052]
gi|403079745|gb|AFR21323.1| DNA-directed RNA polymerase subunit beta' [Lactobacillus helveticus
R0052]
Length = 1217
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 47 PHDYDHVMRPGNQLLNRRPCDEIYVVGEGETLHTISDKCGDPFI 90
P DY ++ P + LN P D Y +GEG+ +H D+ GD I
Sbjct: 572 PDDYFYINEPTEENLNN-PLDAKYFLGEGQDIHDKIDEVGDDLI 614
>gi|161506867|ref|YP_001576821.1| DNA-directed RNA polymerase subunit beta' [Lactobacillus helveticus
DPC 4571]
gi|172048362|sp|A8YXJ9.1|RPOC_LACH4 RecName: Full=DNA-directed RNA polymerase subunit beta'; Short=RNAP
subunit beta'; AltName: Full=RNA polymerase subunit
beta'; AltName: Full=Transcriptase subunit beta'
gi|160347856|gb|ABX26530.1| DNA-directed RNA polymerase, beta prime subunit [Lactobacillus
helveticus DPC 4571]
Length = 1217
Score = 34.7 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 47 PHDYDHVMRPGNQLLNRRPCDEIYVVGEGETLHTISDKCGDPFI 90
P DY ++ P + LN P D Y +GEG+ +H D+ GD I
Sbjct: 572 PDDYFYINEPTEENLNN-PLDAKYFLGEGQDIHDKIDEVGDDLI 614
>gi|303257582|ref|ZP_07343594.1| lipoprotein NlpD [Burkholderiales bacterium 1_1_47]
gi|302859552|gb|EFL82631.1| lipoprotein NlpD [Burkholderiales bacterium 1_1_47]
Length = 254
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 68 EIYVVGEGETLHTISDKCG-DPFIVERNPHIHDPDDVFPGLVIKI-ISPSTPRKLLR 122
+Y V G+TL+ IS + G DP +V R H+ +P + G +++ +S ST + R
Sbjct: 36 SVYTVKPGDTLYAISSRYGLDPAVVARENHLTNPSHLLVGQKLRLSVSSSTDANIRR 92
>gi|330999623|ref|ZP_08323332.1| peptidase, M23 family [Parasutterella excrementihominis YIT 11859]
gi|329574129|gb|EGG55705.1| peptidase, M23 family [Parasutterella excrementihominis YIT 11859]
Length = 245
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 69 IYVVGEGETLHTISDKCG-DPFIVERNPHIHDPDDVFPGLVIKI-ISPSTPRKLLR 122
+Y V G+TL+ IS + G DP +V R H+ +P + G +++ +S ST + R
Sbjct: 28 VYTVKPGDTLYAISSRYGLDPAVVARENHLTNPSHLLVGQKLRLSVSSSTDANIRR 83
>gi|423452276|ref|ZP_17429129.1| spore coat assembly protein exsA, partial [Bacillus cereus
BAG5X1-1]
gi|401141656|gb|EJQ49210.1| spore coat assembly protein exsA, partial [Bacillus cereus
BAG5X1-1]
Length = 252
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 68 EIYVVGEGETLHTISDKCGDPF--IVERNPHIHDPDDVFPGLVIKIIS 113
+I++V +GETL I+ K G F + + N + +PD + PG+ IK+ S
Sbjct: 2 KIHIVQKGETLWKIAKKYGVDFETLKKTNTQLSNPDLIMPGMKIKVPS 49
>gi|423670007|ref|ZP_17645036.1| spore coat assembly protein exsA, partial [Bacillus cereus VDM034]
gi|401297664|gb|EJS03271.1| spore coat assembly protein exsA, partial [Bacillus cereus VDM034]
Length = 266
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 68 EIYVVGEGETLHTISDKCGDPF--IVERNPHIHDPDDVFPGLVIKIIS 113
+I++V +GETL I+ K G F + + N + +PD + PG+ IK+ S
Sbjct: 2 KIHIVQKGETLWKIAKKYGVDFETLKKTNTQLSNPDLIMPGMKIKVPS 49
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.138 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,156,571,544
Number of Sequences: 23463169
Number of extensions: 88109410
Number of successful extensions: 167097
Number of sequences better than 100.0: 228
Number of HSP's better than 100.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 168
Number of HSP's that attempted gapping in prelim test: 166908
Number of HSP's gapped (non-prelim): 273
length of query: 122
length of database: 8,064,228,071
effective HSP length: 89
effective length of query: 33
effective length of database: 5,976,006,030
effective search space: 197208198990
effective search space used: 197208198990
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)