Query 033290
Match_columns 122
No_of_seqs 105 out of 219
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 20:09:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033290.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033290hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gqp_A DOC1/APC10; cell cycle, 100.0 2.5E-43 8.7E-48 276.7 9.3 117 6-122 101-221 (221)
2 1jhj_A APC10; beta sandwich, j 100.0 1.7E-38 5.8E-43 241.1 9.5 96 6-103 70-165 (171)
3 3f2z_A Uncharacterized protein 97.5 0.0017 5.8E-08 46.0 11.3 88 7-102 65-152 (159)
4 3ggl_A Putative chitobiase; X- 97.2 0.007 2.4E-07 43.4 11.5 88 7-102 75-162 (169)
5 2yc2_A IFT25, intraflagellar t 96.5 0.02 6.9E-07 40.5 9.0 77 7-98 59-138 (139)
6 2j1a_A Hyaluronidase, CBM32; p 96.5 0.054 1.8E-06 36.6 10.8 82 7-97 63-150 (150)
7 1tvg_A LOC51668 protein; cell 95.7 0.093 3.2E-06 38.1 9.4 78 7-99 67-147 (153)
8 1xoy_A Hypothetical protein AT 94.5 0.17 5.8E-06 37.3 7.8 84 6-97 69-159 (161)
9 4a41_A GH89_CBM32-5, alpha-N-a 94.3 0.79 2.7E-05 32.4 10.8 81 7-97 81-161 (161)
10 1w8o_A Bacterial sialidase; 3D 93.5 1.3 4.6E-05 36.7 12.2 84 7-99 516-601 (601)
11 2jda_A Yecbm32; hypothetical p 92.5 1.6 5.4E-05 29.3 11.7 84 7-101 54-139 (145)
12 4dxt_A SUN domain-containing p 91.0 1.6 5.5E-05 32.9 8.9 76 20-99 118-196 (198)
13 1wwy_A Thioredoxin-like protei 91.0 0.55 1.9E-05 34.9 6.1 88 7-101 61-157 (171)
14 2v72_A CBM32, EXO-alpha-sialid 88.4 3.9 0.00013 27.0 9.3 79 7-96 63-142 (143)
15 1k3i_A Galactose oxidase precu 82.8 15 0.0005 30.8 10.9 87 7-100 80-167 (656)
16 4a42_A GH89_CBM32-4, alpha-N-a 73.0 20 0.00069 24.7 8.1 60 26-96 87-147 (149)
17 2v5d_A O-GLCNACASE NAGJ; famil 66.6 49 0.0017 29.1 10.3 66 25-97 667-737 (737)
18 4a4a_A Alpha-N-acetylglucosami 45.4 1.8E+02 0.0063 26.6 11.9 36 68-104 124-159 (914)
19 4gwi_A Lectinolysin, platelet 39.6 93 0.0032 21.6 11.0 82 7-102 65-150 (153)
20 1k12_A Lectin; beta barrel, pr 34.1 1.1E+02 0.0039 21.0 9.0 82 6-99 68-154 (158)
21 1czt_A Protein (coagulation fa 29.9 1E+02 0.0035 21.2 5.2 28 67-98 130-157 (160)
22 3alz_B CDW150; viral protein-r 29.8 41 0.0014 24.3 3.0 25 50-78 113-137 (149)
23 2wuh_A Discoidin domain recept 26.8 1.1E+02 0.0039 21.7 5.1 29 67-98 145-173 (178)
24 4hci_A Cupredoxin 1; structura 26.1 19 0.00064 22.9 0.6 18 20-37 21-38 (100)
25 3hnm_A Putative chitobiase; PS 23.1 2E+02 0.007 20.3 9.4 54 24-83 95-148 (172)
26 3bn6_A Lactadherin; anticoagul 22.3 1.9E+02 0.0065 19.7 7.1 27 67-97 131-157 (158)
27 2zxq_A Endo-alpha-N-acetylgala 20.6 21 0.00072 34.3 0.0 70 25-100 1301-1376(1376)
No 1
>1gqp_A DOC1/APC10; cell cycle, APC10/DOC1, APC/cyclosome, ubiquitination, E3 ubiquitin ligase, beta sandwich, jelly roll; 2.2A {Saccharomyces cerevisiae} SCOP: b.18.1.9
Probab=100.00 E-value=2.5e-43 Score=276.72 Aligned_cols=117 Identities=25% Similarity=0.471 Sum_probs=84.3
Q ss_pred EeeeeeeeeeeecCCCCCCCcceEEEEeCCCcCCceEeeEEEEecCceeEEEEccCCCCCCCeEEEEEEEEEeeccccCC
Q 033290 6 VFVLKLVVLYVDFKLDESYTPSKISVRAGDGFHNLKEIKTVELVKPTGWVYISLSGNDPRDTFVNTFMLQIVVLSNHLNG 85 (122)
Q Consensus 6 ~v~I~~i~ly~d~~~DESYTP~~I~I~~G~~~~dL~ev~~v~l~~p~GWv~i~l~~~~~~~~~l~~~~iQI~I~~NhqnG 85 (122)
-+.|+.|+||+||++||||||++|+|++|++++||+|++++++++|.||+.|+++++.+.+++++|++|||+|++|||||
T Consensus 101 ~v~I~~L~iyvD~~~DeSYtPs~I~V~aG~~~~dL~e~~~v~l~~p~GWv~i~l~d~~~~~~~l~~~~IQI~I~~nhqnG 180 (221)
T 1gqp_A 101 RMDICVMAIFFSMIADESYAPSLVKVYAGHSPSDARFYKMLEVRNVNGWVALRFLDNREDDQLLKCQFIRLLFPVNHENG 180 (221)
T ss_dssp EEEECEEEEEEEHHHHGGGSEEEEEEEEESSTTTCEEEEEEEEEECEEEEEECCC--------EEEEEEEEEEEEESTTC
T ss_pred CceEEEEEEEECCCCCCCCCCEEEEEEEeCCcCcceEEEEEEecCCCEEEEEEccCCCCCCCeeEEEEEEEEEeeccCCC
Confidence 47899999999999999999999999999999999999999999999999999987766678899999999999999999
Q ss_pred CCceeecEEEEccCCCCCCCC---Cccc-CchhhhcccccC
Q 033290 86 RDTHVRQIKIYGPRPNPIPHQ---QFQF-TSSEFITYSTVR 122 (122)
Q Consensus 86 rDTHIR~ikI~gp~~~~~~~~---~~~f-~s~e~~~f~~iR 122 (122)
||||||||||+||+++..... .-.| ++|+|.+|++||
T Consensus 181 rDThIRqIkI~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~r 221 (221)
T 1gqp_A 181 KDTHLRGIRLYVPSNEPHQDTHEWAQTLPETNNVFQDAILR 221 (221)
T ss_dssp SSCEESCEEEEEEC---------------------------
T ss_pred CccEEEEEEEEccCCccchhccccccCcccChhhhhheecC
Confidence 999999999999998665421 1144 899999999998
No 2
>1jhj_A APC10; beta sandwich, jellyroll, cell cycle; 1.60A {Homo sapiens} SCOP: b.18.1.9
Probab=100.00 E-value=1.7e-38 Score=241.08 Aligned_cols=96 Identities=54% Similarity=0.915 Sum_probs=87.4
Q ss_pred EeeeeeeeeeeecCCCCCCCcceEEEEeCCCcCCceEeeEEEEecCceeEEEEccCCCCCCCeEEEEEEEEEeeccccCC
Q 033290 6 VFVLKLVVLYVDFKLDESYTPSKISVRAGDGFHNLKEIKTVELVKPTGWVYISLSGNDPRDTFVNTFMLQIVVLSNHLNG 85 (122)
Q Consensus 6 ~v~I~~i~ly~d~~~DESYTP~~I~I~~G~~~~dL~ev~~v~l~~p~GWv~i~l~~~~~~~~~l~~~~iQI~I~~NhqnG 85 (122)
-+.|++|+||+||++||||||++|+|++|++++||+|++++++++|.||+.|++.+ ..++++++|+|||+|++|||||
T Consensus 70 ~v~i~~l~i~vd~~~DeSYtPs~I~v~aG~~~~dL~ei~~v~l~~p~Gwv~i~l~~--~~~~~~~~~~IQI~I~~nhqnG 147 (171)
T 1jhj_A 70 KTTVKTLCIYADYKSDESYTPSKISVRVGNNFHNLQEIRQLELVEPSGWIHVPLTD--NHKKPTRTFMIQIAVLANHQNG 147 (171)
T ss_dssp EEEECEEEEEEEHHHHGGGSEEEEEEEEESSTTSCEEEEEEECSSCEEEEEEECBC--TTSSBEEEEEEEEEEEEEGGGC
T ss_pred CceEEEEEEEECCCCCCCCCcEEEEEEEeCCcccceeEEEEEccCCCEEEEEEecc--CCCCceeEEEEEEEEeccCCCC
Confidence 36799999999999999999999999999999999999999999999999999984 3457899999999999999999
Q ss_pred CCceeecEEEEccCCCCC
Q 033290 86 RDTHVRQIKIYGPRPNPI 103 (122)
Q Consensus 86 rDTHIR~ikI~gp~~~~~ 103 (122)
||||||||||+||+.+.+
T Consensus 148 ~DthIR~ikI~G~~~~~~ 165 (171)
T 1jhj_A 148 RDTHMRQIKIYTPVEESS 165 (171)
T ss_dssp SSCEECEEEEEEEC----
T ss_pred CccEEEEEEEEecCCCCc
Confidence 999999999999987654
No 3
>3f2z_A Uncharacterized protein BF3579; the present C-terminal domain is predominantly composed of B strands., structural genomics, PSI-2; 1.30A {Bacteroides fragilis} PDB: 2kd7_A
Probab=97.53 E-value=0.0017 Score=46.01 Aligned_cols=88 Identities=11% Similarity=0.095 Sum_probs=68.7
Q ss_pred eeeeeeeeeeecCCCCCCCcceEEEEeCCCcCCceEeeEEEEecCceeEEEEccCCCCCCCeEEEEEEEEEeeccccCCC
Q 033290 7 FVLKLVVLYVDFKLDESYTPSKISVRAGDGFHNLKEIKTVELVKPTGWVYISLSGNDPRDTFVNTFMLQIVVLSNHLNGR 86 (122)
Q Consensus 7 v~I~~i~ly~d~~~DESYTP~~I~I~~G~~~~dL~ev~~v~l~~p~GWv~i~l~~~~~~~~~l~~~~iQI~I~~NhqnGr 86 (122)
..|..|.+.-.. ....+.|+...|.+.++-.+..++...++....++..+.+. +.++.||+|.++++..++.
T Consensus 65 ~~i~~v~~~~~~-~~~~~~~~~~~I~~S~Dg~~W~~v~~~~~~~~~~~~~~~~~-------~~~aRYVRi~~~~~~~~~~ 136 (159)
T 3f2z_A 65 VKIAQIELLPRG-RGSNNPIKVVRFEASEDGTNWESIGQFGFTNQDAALKYYVK-------SSTARYIKLVIPDGVGNGT 136 (159)
T ss_dssp EEEEEEEEEECC-TTCCCCCCEEEEEEESSSSSCEEEEEEECCCCSSCEEECCC-------CEEEEEEEEEECSSSSCCS
T ss_pred eEEEEEEEEecC-CCCCCCeeEEEEEEEcCCCCeEEeEEeecCCCCccEEEecC-------CceEEEEEEEEEeccCCCc
Confidence 456777765442 23467899999999888888999888877655566666443 6899999999999998878
Q ss_pred CceeecEEEEccCCCC
Q 033290 87 DTHVRQIKIYGPRPNP 102 (122)
Q Consensus 87 DTHIR~ikI~gp~~~~ 102 (122)
-..|.-|+|||+....
T Consensus 137 ~~si~Ei~vy~~~~~~ 152 (159)
T 3f2z_A 137 VAAIRELDVRGTVVNL 152 (159)
T ss_dssp CCEEEEEEEEEEECC-
T ss_pred eEEEEEEEEEcCCCCc
Confidence 8999999999987643
No 4
>3ggl_A Putative chitobiase; X-RAY, structure genomics, NESG, BTR324A, Q8A9F0_bactn, BT_0865, PSI-2, protein structure initiative; 3.00A {Bacteroides thetaiotaomicron}
Probab=97.21 E-value=0.007 Score=43.43 Aligned_cols=88 Identities=10% Similarity=0.089 Sum_probs=68.4
Q ss_pred eeeeeeeeeeecCCCCCCCcceEEEEeCCCcCCceEeeEEEEecCceeEEEEccCCCCCCCeEEEEEEEEEeeccccCCC
Q 033290 7 FVLKLVVLYVDFKLDESYTPSKISVRAGDGFHNLKEIKTVELVKPTGWVYISLSGNDPRDTFVNTFMLQIVVLSNHLNGR 86 (122)
Q Consensus 7 v~I~~i~ly~d~~~DESYTP~~I~I~~G~~~~dL~ev~~v~l~~p~GWv~i~l~~~~~~~~~l~~~~iQI~I~~NhqnGr 86 (122)
..|..|.+.-. .....+.|+...|.+.++-.+...+...++....++..+.+. +.++.||+|.++++..++.
T Consensus 75 ~~i~~v~~~~r-~~~~~~~~~~y~I~~S~Dg~~W~~v~~~~~~~~~~~~~~~f~-------~~~aRYVRi~~~~~~~~~~ 146 (169)
T 3ggl_A 75 IQIAQVELLPR-GRGSNNPIKVVEFAASEDNVNWTPIGRFGFTNQDAALEYYVK-------SIKARYIRLTIPDDGGNST 146 (169)
T ss_dssp EEEEEEEEEEC-CTTCCCCCCEEEEEEESSSSCCEEEEEEECCCCSSCEEECCC-------CEEEEEEEEEECSSSSCCS
T ss_pred EEEeEEEEEec-CCCCCCCeeEEEEEEeCCCCCcEEeEEEEeccCCCcEEEEec-------CceEEEEEEEEEeCCCCCc
Confidence 45677766443 223478899999999988889999988877655566666443 6899999999999988778
Q ss_pred CceeecEEEEccCCCC
Q 033290 87 DTHVRQIKIYGPRPNP 102 (122)
Q Consensus 87 DTHIR~ikI~gp~~~~ 102 (122)
-..|.-|+|||+....
T Consensus 147 ~~si~Ei~vy~~~~~~ 162 (169)
T 3ggl_A 147 VAAIRELDVKGTIINL 162 (169)
T ss_dssp CCEEEEEEEEEEECC-
T ss_pred eEEEEEEEEEcCCCCc
Confidence 8999999999987643
No 5
>2yc2_A IFT25, intraflagellar transport protein 25; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_A
Probab=96.53 E-value=0.02 Score=40.46 Aligned_cols=77 Identities=16% Similarity=0.203 Sum_probs=56.4
Q ss_pred eeeeeeeeeeecCCCCCCCcceEEEEeCCCc--CCceEeeEEEEecCceeEEE-EccCCCCCCCeEEEEEEEEEeecccc
Q 033290 7 FVLKLVVLYVDFKLDESYTPSKISVRAGDGF--HNLKEIKTVELVKPTGWVYI-SLSGNDPRDTFVNTFMLQIVVLSNHL 83 (122)
Q Consensus 7 v~I~~i~ly~d~~~DESYTP~~I~I~~G~~~--~dL~ev~~v~l~~p~GWv~i-~l~~~~~~~~~l~~~~iQI~I~~Nhq 83 (122)
+.|+.+.|. +|.++.+.|.+..+- .+++++...++.+..|+..+ .+. .+.++.+|+|.|++++.
T Consensus 59 ~~is~~~i~-------~~~~k~~~ie~s~~~~p~~w~~i~~~~f~~~~~~~q~~~f~------~~~~a~~lrl~i~s~~d 125 (139)
T 2yc2_A 59 IRVSKITTL-------SLNVRKLAVEKCDQDKPDQFEKVFEVELANRGDRLQTEVHQ------VNIRAKYLKFILLQGHG 125 (139)
T ss_dssp EEEEEEEEE-------EESEEEEEEEEECSSSCCCCEEEEEEECCCC--CCEEEEEE------EEEEEEEEEEEEEEESS
T ss_pred eEEEEEEEE-------ecCCcEEEEEEecCCCCCceEEEEEEEeecCCCCceEEEcc------CCCcEEEEEEEEEeccC
Confidence 456666665 245899999887764 69999988888888786543 232 13568999999999998
Q ss_pred CCCCceeecEEEEcc
Q 033290 84 NGRDTHVRQIKIYGP 98 (122)
Q Consensus 84 nGrDTHIR~ikI~gp 98 (122)
+ =+.|..|+|+|-
T Consensus 126 ~--f~~iy~~~v~G~ 138 (139)
T 2yc2_A 126 E--FATVNRVSVVGG 138 (139)
T ss_dssp S--CCEEEEEEEEEC
T ss_pred c--eEEEEEEEEEec
Confidence 8 399999999983
No 6
>2j1a_A Hyaluronidase, CBM32; protein-carbohydrate interaction, glycoside hydrolase, GH84C, hydrolase; HET: GAL; 1.49A {Clostridium perfringens} PDB: 2j1e_A* 2j7m_A*
Probab=96.50 E-value=0.054 Score=36.62 Aligned_cols=82 Identities=16% Similarity=0.172 Sum_probs=59.6
Q ss_pred eeeeeeeeeeecCCC-CCCCcceEEEEeCCCcCCceEeeEEEEecCceeEEEEccCCCCCCCeEEEEEEEEEeecccc--
Q 033290 7 FVLKLVVLYVDFKLD-ESYTPSKISVRAGDGFHNLKEIKTVELVKPTGWVYISLSGNDPRDTFVNTFMLQIVVLSNHL-- 83 (122)
Q Consensus 7 v~I~~i~ly~d~~~D-ESYTP~~I~I~~G~~~~dL~ev~~v~l~~p~GWv~i~l~~~~~~~~~l~~~~iQI~I~~Nhq-- 83 (122)
..|..|.++-. .| ....|....|.+.++-.+...+...+.....++..+.+. +..+.||+|.++.++.
T Consensus 63 ~~i~~v~~~~~--~~~~~~~~~~~~i~~S~Dg~~w~~v~~~~~~~~~~~~~~~~~-------~~~aryvRi~~~~~~~~~ 133 (150)
T 2j1a_A 63 YEINKVKYAPR--QDSKNGRITGYKVSVSLDGENFTEVKTGTLEDNAAIKFIEFD-------SVDAKYVRLDVTDSVSDQ 133 (150)
T ss_dssp EEEEEEEEECC--SSCCTTEEEEEEEEEESSSSSEEEEEEEECCSSSSCEEEEEE-------EEEEEEEEEEEEEEECCC
T ss_pred eEEeEEEEeec--CCCCCCCEEEEEEEEEcCCCceEEEEEeeECCCCceEEEEEC-------CeEEEEEEEEEEeccccc
Confidence 45667777543 23 356788899998877777777777666655567777765 6899999999998762
Q ss_pred ---CCCCceeecEEEEc
Q 033290 84 ---NGRDTHVRQIKIYG 97 (122)
Q Consensus 84 ---nGrDTHIR~ikI~g 97 (122)
.|.-..|..|+|||
T Consensus 134 ~~~~~~~~~i~Ei~v~G 150 (150)
T 2j1a_A 134 ANGRGKFATAAEVNVHG 150 (150)
T ss_dssp --CTTTCCEESEEEEEC
T ss_pred ccCCCceEEEEEEEEeC
Confidence 23448899999987
No 7
>1tvg_A LOC51668 protein; cell cycle, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.60A {Homo sapiens} SCOP: b.18.1.9 PDB: 1xpw_A
Probab=95.73 E-value=0.093 Score=38.06 Aligned_cols=78 Identities=12% Similarity=0.182 Sum_probs=59.1
Q ss_pred eeeeeeeeeeecCCCCCCCcceEEEEeCCCcC--CceEeeEEEEecCceeEEE-EccCCCCCCCeEEEEEEEEEeecccc
Q 033290 7 FVLKLVVLYVDFKLDESYTPSKISVRAGDGFH--NLKEIKTVELVKPTGWVYI-SLSGNDPRDTFVNTFMLQIVVLSNHL 83 (122)
Q Consensus 7 v~I~~i~ly~d~~~DESYTP~~I~I~~G~~~~--dL~ev~~v~l~~p~GWv~i-~l~~~~~~~~~l~~~~iQI~I~~Nhq 83 (122)
+.|+.+.+.. |.++.+.|.+..+-. +++++...++.+..|+..+ .+. .+.++.+|+|.|++++.
T Consensus 67 ~~is~~~i~~-------~~vk~~~ie~s~d~~p~~w~~i~e~ef~~~~n~~Q~~~~~------~~~~a~~lRl~i~s~~d 133 (153)
T 1tvg_A 67 VRIERLVIQS-------YFVQTLKIEKSTSKEPVDFEQWIEKDLVHTEGQLQNEEIV------AHGSATYLRFIIVSAFD 133 (153)
T ss_dssp EEEEEEEEEE-------ESEEEEEEEEECSSSSCCCEEEEEEECCCCTTCCEEEEEC------CCEEEEEEEEEEEEESS
T ss_pred eEEEEEEEEe-------cCCEEEEEEEECCCCCcceEEeEEEEecCCCCcEEEEEcC------CCceeEEEEEEEEcccc
Confidence 4566666652 358888888877664 9999999999888776433 333 14789999999998888
Q ss_pred CCCCceeecEEEEccC
Q 033290 84 NGRDTHVRQIKIYGPR 99 (122)
Q Consensus 84 nGrDTHIR~ikI~gp~ 99 (122)
.= ..|..|.|+|-.
T Consensus 134 ~f--v~Iy~l~v~G~~ 147 (153)
T 1tvg_A 134 HF--ASVHSVSAEGTV 147 (153)
T ss_dssp SC--CEEEEEEEEEEE
T ss_pred cE--EEEEEEEEEEEE
Confidence 74 888889999854
No 8
>1xoy_A Hypothetical protein AT3G04780.1; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Arabidopsis thaliana} SCOP: b.18.1.26
Probab=94.54 E-value=0.17 Score=37.33 Aligned_cols=84 Identities=23% Similarity=0.271 Sum_probs=59.5
Q ss_pred EeeeeeeeeeeecCCCCCCCcceEEEEeCCC---cC---CceEeeEEEEecCc-eeEEEEccCCCCCCCeEEEEEEEEEe
Q 033290 6 VFVLKLVVLYVDFKLDESYTPSKISVRAGDG---FH---NLKEIKTVELVKPT-GWVYISLSGNDPRDTFVNTFMLQIVV 78 (122)
Q Consensus 6 ~v~I~~i~ly~d~~~DESYTP~~I~I~~G~~---~~---dL~ev~~v~l~~p~-GWv~i~l~~~~~~~~~l~~~~iQI~I 78 (122)
.|.|++|.|.- .++ ..|++|++++-.. |. |+.-..++++.+.. +|..++++-. +...+.-|+|-|
T Consensus 69 ~VKl~Si~i~~---~~~-~~Pk~iKlf~N~~~ldFd~a~~~~p~Q~~el~~~~~~g~~~~lr~v----kFqnV~sLtlf~ 140 (161)
T 1xoy_A 69 VIKLHSFAIKG---PEE-EGPKTVKFFSNKEHMCFSNVNDFPPSDTAELTEENLKGKPVVLKYV----KFQNVRSLTIFI 140 (161)
T ss_dssp EECEEEEEEEC---CTT-TSEEEEEEEESCSCCCHHHHTTSCCSEEECCCTTGGGTCCEECCTT----TCSCEEEEEEEE
T ss_pred cEEEEEEEEEC---CCC-CCCcEEEEeeCCCCCChhhhccCCCceEEECCCCcCCCcEEeccce----eEcccCEEEEEE
Confidence 35566666663 355 8999999998733 22 34444677787664 4477777622 456788999999
Q ss_pred eccccCCCCceeecEEEEc
Q 033290 79 LSNHLNGRDTHVRQIKIYG 97 (122)
Q Consensus 79 ~~NhqnGrDTHIR~ikI~g 97 (122)
..|+-.+--|+|.-|.++|
T Consensus 141 ~~n~~g~e~T~I~~I~l~G 159 (161)
T 1xoy_A 141 EANQSGSEVTKVQKIALYG 159 (161)
T ss_dssp EEETTCCSCCEESEEEEEE
T ss_pred ecCCCCCccEEEEEEEEEe
Confidence 9997444569999999998
No 9
>4a41_A GH89_CBM32-5, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: GAL; 1.55A {Clostridium perfringens} PDB: 4a44_A* 4a45_A* 4aax_A*
Probab=94.32 E-value=0.79 Score=32.38 Aligned_cols=81 Identities=7% Similarity=0.119 Sum_probs=57.8
Q ss_pred eeeeeeeeeeecCCCCCCCcceEEEEeCCCcCCceEeeEEEEecCceeEEEEccCCCCCCCeEEEEEEEEEeeccccCCC
Q 033290 7 FVLKLVVLYVDFKLDESYTPSKISVRAGDGFHNLKEIKTVELVKPTGWVYISLSGNDPRDTFVNTFMLQIVVLSNHLNGR 86 (122)
Q Consensus 7 v~I~~i~ly~d~~~DESYTP~~I~I~~G~~~~dL~ev~~v~l~~p~GWv~i~l~~~~~~~~~l~~~~iQI~I~~NhqnGr 86 (122)
..|..|.+.-. .......|....|.+.++-.+..++...++....++..+.+. +.++.||+|.++++.. |
T Consensus 81 ~~I~~v~~~~r-~~~~~~~~~~y~I~~S~DG~~W~~v~~g~~~~~~~~~~~~f~-------~v~aRYVRi~~~~~~~-~- 150 (161)
T 4a41_A 81 YEINKFTYLPR-SGAKNGNITKYELHVSEDGNNFRKISEGNWDDSGSLKTLKFN-------STKATHVKLVALEGVG-G- 150 (161)
T ss_dssp EEEEEEEEECC-SSCCTTCEEEEEEEEESSSSCEEEEEEEECCSSSSCEEEEEE-------EEEEEEEEEEEEEEGG-G-
T ss_pred EEEeEEEEEec-CCCCCCcEEEEEEEEECCCCceEEeeeeeecCCCcEEEEEeC-------CceEEEEEEEEEEccC-C-
Confidence 35666654332 222457899999999888888888877666655567777776 5899999999998753 2
Q ss_pred CceeecEEEEc
Q 033290 87 DTHVRQIKIYG 97 (122)
Q Consensus 87 DTHIR~ikI~g 97 (122)
=.-|.-|+||+
T Consensus 151 ~~si~E~~Vya 161 (161)
T 4a41_A 151 FASAAELNVFA 161 (161)
T ss_dssp CCEESEEEEEC
T ss_pred eEEeEeEEEEC
Confidence 35777788774
No 10
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=93.52 E-value=1.3 Score=36.75 Aligned_cols=84 Identities=7% Similarity=0.050 Sum_probs=61.0
Q ss_pred eeeeeeeeeeecCCC-CCCCcceEEEEeCCCcCCceE-eeEEEEecCceeEEEEccCCCCCCCeEEEEEEEEEeeccccC
Q 033290 7 FVLKLVVLYVDFKLD-ESYTPSKISVRAGDGFHNLKE-IKTVELVKPTGWVYISLSGNDPRDTFVNTFMLQIVVLSNHLN 84 (122)
Q Consensus 7 v~I~~i~ly~d~~~D-ESYTP~~I~I~~G~~~~dL~e-v~~v~l~~p~GWv~i~l~~~~~~~~~l~~~~iQI~I~~Nhqn 84 (122)
..|..|.+.-. .| ....|+...|.+.++-.+..+ +..-++....++..+.+. +.++.||+|.+.+++.+
T Consensus 516 ~~i~~v~~~~r--~~~~~~~~~~y~i~~S~Dg~~w~~~v~~~~~~~~~~~~~~~f~-------~~~aRyvRi~~~~~~~~ 586 (601)
T 1w8o_A 516 HTISGLQYTRR--QNSANEQVADYEIYTSLNGTTWDGPVASGRFTTSLAPQRAVFP-------ARDARYIRLVALSEQTG 586 (601)
T ss_dssp EEEEEEEEEEC--SSCSTTCBCEEEEEEESSSSSCEEEEEEEECCSCSSCEEEEEE-------EEEEEEEEEEECCBTTS
T ss_pred EEEeEEEEecC--CCCCCCceEEEEEEEECCCCccceeeeeEEEcCCCceEEEEeC-------CcceEEEEEEEEEcCCC
Confidence 45666666422 23 356889999999888878876 665555443456666665 58999999999998765
Q ss_pred CCCceeecEEEEccC
Q 033290 85 GRDTHVRQIKIYGPR 99 (122)
Q Consensus 85 GrDTHIR~ikI~gp~ 99 (122)
+.=-.|.-|+|||.|
T Consensus 587 ~~~~~i~Ei~v~g~~ 601 (601)
T 1w8o_A 587 HKYAAVAELEVEGQR 601 (601)
T ss_dssp CSCCEEEEEEEEECC
T ss_pred CceEEEEEEEEEecC
Confidence 556899999999975
No 11
>2jda_A Yecbm32; hypothetical protein, carbohydrate- binding module, sugar-binding protein, pectin, plant cell WALL, galacturonic acid; 1.35A {Yersinia enterocolitica} PDB: 2jd9_A
Probab=92.54 E-value=1.6 Score=29.27 Aligned_cols=84 Identities=8% Similarity=0.027 Sum_probs=55.8
Q ss_pred eeeeeeeeeeecCCCCCCCcceEEEEeCCCcCCceEeeEEEE--ecCceeEEEEccCCCCCCCeEEEEEEEEEeeccccC
Q 033290 7 FVLKLVVLYVDFKLDESYTPSKISVRAGDGFHNLKEIKTVEL--VKPTGWVYISLSGNDPRDTFVNTFMLQIVVLSNHLN 84 (122)
Q Consensus 7 v~I~~i~ly~d~~~DESYTP~~I~I~~G~~~~dL~ev~~v~l--~~p~GWv~i~l~~~~~~~~~l~~~~iQI~I~~Nhqn 84 (122)
..|..|.+... +....|....|.+-++-.++..+..... ....++..+.+. +..+.||+|.+..+..+
T Consensus 54 ~~v~~v~i~~~---~~~~~~~~~~i~~S~Dg~~w~~~~~~~~~~~~~~~~~~~~f~-------~~~aryvRi~~~~~~~~ 123 (145)
T 2jda_A 54 QSIENILIVPF---KPTERKLKFSIFYSNDGKNWQPLAEGLETSSADKNGEKLTFT-------PVTAKYIKLDTFGTDVN 123 (145)
T ss_dssp EEEEEEEEEES---STTTCCEEEEEEEESSSSSCEEEEEEEECCCSCSSCEEEEEE-------EEEEEEEEEEEEEESSS
T ss_pred eEEEEEEEEec---cCCCceEEEEEEEeCCCCceEEeeeCccccCCCCccEEEEeC-------cccEEEEEEEEECCCCC
Confidence 45666666544 2234678888887666566666665443 122345566554 68999999999987653
Q ss_pred CCCceeecEEEEccCCC
Q 033290 85 GRDTHVRQIKIYGPRPN 101 (122)
Q Consensus 85 GrDTHIR~ikI~gp~~~ 101 (122)
.-..|..|+|||....
T Consensus 124 -~~~~i~Ei~v~g~~~~ 139 (145)
T 2jda_A 124 -NWSAINEIAINSAAAL 139 (145)
T ss_dssp -SEEEEEEEEESCCCSS
T ss_pred -cEeEEEEEEEECCCCC
Confidence 3478999999998653
No 12
>4dxt_A SUN domain-containing protein 2; beta-sandwich, LINC complex, structural protein; 2.22A {Homo sapiens} PDB: 3unp_A 4dxr_A* 4dxs_A* 4fi9_A
Probab=91.01 E-value=1.6 Score=32.85 Aligned_cols=76 Identities=12% Similarity=0.094 Sum_probs=53.2
Q ss_pred CCCCCCcceEEEEeCCCcCC--ceEeeEEEEecC-ceeEEEEccCCCCCCCeEEEEEEEEEeeccccCCCCceeecEEEE
Q 033290 20 LDESYTPSKISVRAGDGFHN--LKEIKTVELVKP-TGWVYISLSGNDPRDTFVNTFMLQIVVLSNHLNGRDTHVRQIKIY 96 (122)
Q Consensus 20 ~DESYTP~~I~I~~G~~~~d--L~ev~~v~l~~p-~GWv~i~l~~~~~~~~~l~~~~iQI~I~~NhqnGrDTHIR~ikI~ 96 (122)
.|=|=.|+.+.|.+=....+ ...+...+.+.. ..-..+.+.. + .......||+.|++||=|..=|-|..+||+
T Consensus 118 ~~~~SAPKdf~V~g~~~~~~~~~~~Lg~f~Y~~~~~~~QtF~l~~--~--~~~~~~~V~l~i~SN~G~~~~TClYr~RVh 193 (198)
T 4dxt_A 118 STISSAPKDFAIFGFDEDLQQEGTLLGKFTYDQDGEPIQTFHFQA--P--TMATYQVVELRILTNWGHPEYTCIYRFRVH 193 (198)
T ss_dssp GCCTTSBCEEEEEEESSSSCCCCEEEEEEECCTTSCSEEEEECSS--C--CSCCEEEEEEEECCBSSCSSEEEECEEEEE
T ss_pred cCcCCCCcEEEEEEEcCCCCCCcEEEEEEEECCCCCcceEEEeCC--C--CCcceeEEEEEEECCCCCCCcEEEEEEEEc
Confidence 46788999999997554432 334455555432 2456666652 1 123466899999999999999999999999
Q ss_pred ccC
Q 033290 97 GPR 99 (122)
Q Consensus 97 gp~ 99 (122)
|-+
T Consensus 194 G~~ 196 (198)
T 4dxt_A 194 GEP 196 (198)
T ss_dssp EEC
T ss_pred CEe
Confidence 964
No 13
>1wwy_A Thioredoxin-like protein 1; structural genomics, hypothetical protein, regulatory protei apoptosis, cancer; NMR {Homo sapiens}
Probab=91.00 E-value=0.55 Score=34.94 Aligned_cols=88 Identities=17% Similarity=0.132 Sum_probs=60.6
Q ss_pred eeeeeeeeeeecCCCCCCCcceEEEEeCC-C---cC---CceEeeEEEEecCc--eeEEEEccCCCCCCCeEEEEEEEEE
Q 033290 7 FVLKLVVLYVDFKLDESYTPSKISVRAGD-G---FH---NLKEIKTVELVKPT--GWVYISLSGNDPRDTFVNTFMLQIV 77 (122)
Q Consensus 7 v~I~~i~ly~d~~~DESYTP~~I~I~~G~-~---~~---dL~ev~~v~l~~p~--GWv~i~l~~~~~~~~~l~~~~iQI~ 77 (122)
|.|++|.|.- .++-..|++|++++-. . |. |+.-..+++|.+.. +|..++++-. +...+.-|+|-
T Consensus 61 VKl~Si~i~~---~~~~~~Pk~iKlf~N~~~~ldFd~a~~~~p~Q~~eL~~~~~~~g~~~~Lr~v----kFqnV~sLtlf 133 (171)
T 1wwy_A 61 VKLYSMKFQG---PDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYV----KFQNVNSVTIF 133 (171)
T ss_dssp EEEEEEEECC---CSSSCCBCEEEEEESCSSCCCTTHHHHSCCSSCEECCTTTSSTTCCEECCTT----TCTTEEEEEEE
T ss_pred EEEEEEEEEC---CCCCCCCcEEEEeecCCCCcChhhhccCCCceEEEcCCcccCCCcEEEccce----EEcccCEEEEE
Confidence 5566666653 3455699999999975 2 22 23333567777542 4667777622 45677889999
Q ss_pred eeccccCCCCceeecEEEEccCCC
Q 033290 78 VLSNHLNGRDTHVRQIKIYGPRPN 101 (122)
Q Consensus 78 I~~NhqnGrDTHIR~ikI~gp~~~ 101 (122)
|..|+-++--|+|.-|.++|-...
T Consensus 134 ~~~n~~g~e~T~I~~I~l~Ge~~~ 157 (171)
T 1wwy_A 134 VQSNQGEEETTRISYFTFIGTPVQ 157 (171)
T ss_dssp ECCBTTCCSSCCBCCEEEEEEESS
T ss_pred EecCCCCCccEEEEEEEEEeEecC
Confidence 999995556799999999995543
No 14
>2v72_A CBM32, EXO-alpha-sialidase; galactose, bacterial pathogen, carbohydrate-binding module, sugar-binding protein; HET: GAL; 2.25A {Clostridium perfringens}
Probab=88.41 E-value=3.9 Score=27.00 Aligned_cols=79 Identities=5% Similarity=-0.001 Sum_probs=49.5
Q ss_pred eeeeeeeeeeecCCC-CCCCcceEEEEeCCCcCCceEeeEEEEecCceeEEEEccCCCCCCCeEEEEEEEEEeeccccCC
Q 033290 7 FVLKLVVLYVDFKLD-ESYTPSKISVRAGDGFHNLKEIKTVELVKPTGWVYISLSGNDPRDTFVNTFMLQIVVLSNHLNG 85 (122)
Q Consensus 7 v~I~~i~ly~d~~~D-ESYTP~~I~I~~G~~~~dL~ev~~v~l~~p~GWv~i~l~~~~~~~~~l~~~~iQI~I~~NhqnG 85 (122)
..|..|.+.-. .| ....|+...|.+.++-.+ ..+..-+.....+...+.+. .++.+.||+|.+++.+.
T Consensus 63 ~~i~~v~~~~~--~~~~~~~~~~~~i~~S~Dg~~-~~v~~g~~~~~~~~~~~~f~------~p~~aRyvRi~~~~~~~-- 131 (143)
T 2v72_A 63 RKVSSIAITPR--TSGNNGFITKYEIHAINNGVE-TLVAEGTWEENNLVKTVTFD------SPIDAEEIKITAIQGVG-- 131 (143)
T ss_dssp EEEEEEEEECC--SSCCTTCEEEEEEEEEETTEE-EEEEEEECCSSSSCEEEEEE------EEEEEEEEEEEEEEEGG--
T ss_pred eEEeEEEEEec--ccCCCCCEEEEEEEEEcCCCc-cEEeEEEEcCCCceEEEEeC------CCCcEEEEEEEEEEcCC--
Confidence 45566666543 23 244578888887655444 44433333332456667666 46899999999998875
Q ss_pred CCceeecEEEE
Q 033290 86 RDTHVRQIKIY 96 (122)
Q Consensus 86 rDTHIR~ikI~ 96 (122)
.-..|.-|+||
T Consensus 132 ~~~~i~Ei~v~ 142 (143)
T 2v72_A 132 GFASIAELNVY 142 (143)
T ss_dssp GCCEESEEEEE
T ss_pred CeEEEEEEEEE
Confidence 33677777776
No 15
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=82.82 E-value=15 Score=30.77 Aligned_cols=87 Identities=7% Similarity=0.010 Sum_probs=60.2
Q ss_pred eeeeeeeeeeecCCCCCCCcceEEEEeCCCcCCc-eEeeEEEEecCceeEEEEccCCCCCCCeEEEEEEEEEeeccccCC
Q 033290 7 FVLKLVVLYVDFKLDESYTPSKISVRAGDGFHNL-KEIKTVELVKPTGWVYISLSGNDPRDTFVNTFMLQIVVLSNHLNG 85 (122)
Q Consensus 7 v~I~~i~ly~d~~~DESYTP~~I~I~~G~~~~dL-~ev~~v~l~~p~GWv~i~l~~~~~~~~~l~~~~iQI~I~~NhqnG 85 (122)
..|..+.+.-....+....|+...|.+-++-.+. +.+..-+.....++..+.+. +.++.||+|.++++..+.
T Consensus 80 ~~i~~v~~~~~~~~~~~~~~~~y~i~~S~Dg~~w~~~v~~~~~~~~~~~~~~~~~-------~~~aRyvRi~~~~~~~~~ 152 (656)
T 1k3i_A 80 QNVNGLSMLPRQDGNQNGWIGRHEVYLSSDGTNWGSPVASGSWFADSTTKYSNFE-------TRPARYVRLVAITEANGQ 152 (656)
T ss_dssp EEEEEEEEECCCSSCCTTCBCEEEEEEESSSSCCCSCSEEEECCSSSSCEEEEEE-------EEEEEEEEEEECSBTTSC
T ss_pred EEEEEEEEEecccCCCCCCeeEEEEEEECCCCCcceeeeeeeecCCCcceeeecC-------CcceEEEEEEEecccccC
Confidence 4455555543321122346889999987777777 66666666655556666665 589999999999987654
Q ss_pred CCceeecEEEEccCC
Q 033290 86 RDTHVRQIKIYGPRP 100 (122)
Q Consensus 86 rDTHIR~ikI~gp~~ 100 (122)
+=..|.-+.||+...
T Consensus 153 ~~~si~E~~v~~~~~ 167 (656)
T 1k3i_A 153 PWTSIAEINVFQASS 167 (656)
T ss_dssp SCCEESEEEEEECSC
T ss_pred CceeEEEEEEeeccc
Confidence 447899999999764
No 16
>4a42_A GH89_CBM32-4, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: MSE; 1.55A {Clostridium perfringens}
Probab=72.97 E-value=20 Score=24.71 Aligned_cols=60 Identities=17% Similarity=0.112 Sum_probs=37.2
Q ss_pred cceEEEEeCCCcCCceEeeEE-EEecCceeEEEEccCCCCCCCeEEEEEEEEEeeccccCCCCceeecEEEE
Q 033290 26 PSKISVRAGDGFHNLKEIKTV-ELVKPTGWVYISLSGNDPRDTFVNTFMLQIVVLSNHLNGRDTHVRQIKIY 96 (122)
Q Consensus 26 P~~I~I~~G~~~~dL~ev~~v-~l~~p~GWv~i~l~~~~~~~~~l~~~~iQI~I~~NhqnGrDTHIR~ikI~ 96 (122)
++...|.+.++-.++.++... +.........+.+. .++++.||+|.++.+ --.|.-|+||
T Consensus 87 v~~y~I~~S~DG~~W~~~~~~g~~~~~~~~~~~~f~------~pv~aRYVRi~~~~~-----~~si~E~~Vy 147 (149)
T 4a42_A 87 PLKYSIEISNDGTEWTKIVDENNNEENKAVYSNILK------SGKIGRFVRFNFNSE-----NVKIGEIKIY 147 (149)
T ss_dssp CCCEEEEEESSSSSCEEEEEETTCCCCCSEEEEECC------TTCEEEEEEEEECSS-----SCCEEEEEEE
T ss_pred cEEEEEEEEcCCCeEeEeEEcceeCCCCceEEEEcC------CCceEEEEEEEEecC-----CcEEEEEEEE
Confidence 677777777666666654322 12122234555554 468999999999876 3456666766
No 17
>2v5d_A O-GLCNACASE NAGJ; family 32 carbohydrate binding module, glycosidase, GH84, GH84C, CBM32, hydrolase, coiled coil; 3.30A {Clostridium perfringens}
Probab=66.58 E-value=49 Score=29.08 Aligned_cols=66 Identities=18% Similarity=0.214 Sum_probs=44.4
Q ss_pred CcceEEEEeCCCcCCceEeeEEEEecCceeEEEEccCCCCCCCeEEEEEEEEEeecccc---CC--CCceeecEEEEc
Q 033290 25 TPSKISVRAGDGFHNLKEIKTVELVKPTGWVYISLSGNDPRDTFVNTFMLQIVVLSNHL---NG--RDTHVRQIKIYG 97 (122)
Q Consensus 25 TP~~I~I~~G~~~~dL~ev~~v~l~~p~GWv~i~l~~~~~~~~~l~~~~iQI~I~~Nhq---nG--rDTHIR~ikI~g 97 (122)
.++...|.+-++-.++..+...+.....+...+.+. +.++.||+|.+.++.. +| .--.|.-++|||
T Consensus 667 ~v~~y~I~~S~DG~~W~~v~~gt~~~~~~~~~v~f~-------~v~ARYVRi~~~~~~~~~~~G~~~~~siaE~~VyG 737 (737)
T 2v5d_A 667 RITGYKVSVSLDGENFTEVKTGTLEDNAAIKFIEFD-------SVDAKYVRLDVTDSVSDQANGRGKFATAAEVNVHG 737 (737)
T ss_dssp EEEEEEEEEESSSSCCCCSEEEECCSSSSCEEEEEE-------EEEEEEEEEEEEEEECSSSSCTTTCCEESEEEEEC
T ss_pred ceEEEEEEEEcCCCceEEEEeeeecCCCceEEEEeC-------CceEEEEEEEEEeeccccccCCCCcEEEEEEEEEC
Confidence 456666666555556666665555433345556554 5889999999998874 34 346888889887
No 18
>4a4a_A Alpha-N-acetylglucosaminidase family protein; hydrolase, 2 hydrolase, family 89 glycoside hydrolase, mucin carbohydrate-active enzyme; HET: NDG GAL; 1.90A {Clostridium perfringens} PDB: 2vcc_A 2vc9_A* 2vcb_A* 2vca_A
Probab=45.37 E-value=1.8e+02 Score=26.61 Aligned_cols=36 Identities=17% Similarity=0.251 Sum_probs=28.7
Q ss_pred eEEEEEEEEEeeccccCCCCceeecEEEEccCCCCCC
Q 033290 68 FVNTFMLQIVVLSNHLNGRDTHVRQIKIYGPRPNPIP 104 (122)
Q Consensus 68 ~l~~~~iQI~I~~NhqnGrDTHIR~ikI~gp~~~~~~ 104 (122)
+.++.||+|.+.++-.+ ---.|..++|||......+
T Consensus 124 pv~ARYVRL~~t~~~~~-~~~SI~EfeVyG~~~g~~P 159 (914)
T 4a4a_A 124 NVRAGKIRIDVVQNSNS-DRVNIAEINVFGKNTGESL 159 (914)
T ss_dssp EEEEEEEEEEEEEETTC-SSCEESEEEEEEEECSCCC
T ss_pred CceEEEEEEEEEecCCC-CceEEEEEEEEcCCCCCCC
Confidence 58999999999887643 3478999999998765544
No 19
>4gwi_A Lectinolysin, platelet aggregation factor SM-HPAF; cholesterol-dependent cytolysins, lewis antigens, F-type LEC glycan binding; HET: BDZ; 1.60A {Streptococcus mitis} PDB: 4gwj_A* 3lei_A* 3leg_A* 3le0_A* 3lek_A*
Probab=39.63 E-value=93 Score=21.58 Aligned_cols=82 Identities=9% Similarity=0.074 Sum_probs=47.0
Q ss_pred eeeeeeeeeeecCCCC--CCCcceEEEEeCCCcCCceEeeEEEEec-Cc-eeEEEEccCCCCCCCeEEEEEEEEEeeccc
Q 033290 7 FVLKLVVLYVDFKLDE--SYTPSKISVRAGDGFHNLKEIKTVELVK-PT-GWVYISLSGNDPRDTFVNTFMLQIVVLSNH 82 (122)
Q Consensus 7 v~I~~i~ly~d~~~DE--SYTP~~I~I~~G~~~~dL~ev~~v~l~~-p~-GWv~i~l~~~~~~~~~l~~~~iQI~I~~Nh 82 (122)
..|..|.|+-- .|- +---....|+.|++ |-+....+.... +. +-..+.+. +.+++||+|.+..+-
T Consensus 65 ~~v~~V~i~nr--~d~~~~~r~~~~~I~v~s~--dg~~w~~~~~~~~~~~~~~~i~~~-------~~~gRYVrv~~~~~~ 133 (153)
T 4gwi_A 65 ENVGKVKLYNR--GDGNVANRLSNFDVVLLNE--AKQEVARQHFDSLNGKAELEVFFT-------AKDARYVKVELKTKN 133 (153)
T ss_dssp EEEEEEEEEEC--CSTTCGGGSCSEEEEEECT--TSCEEEEEEESCCTTCSEEEEEEE-------EEEEEEEEEEECSSS
T ss_pred EEEEEEEEEcc--cCCchhhcccceEEEEECC--CCCeeeeeEEecCCCCCEEEEEeC-------CceEEEEEEEEEcCC
Confidence 45677777532 232 22234566777754 222333333333 22 34455554 478999999998652
Q ss_pred cCCCCceeecEEEEccCCCC
Q 033290 83 LNGRDTHVRQIKIYGPRPNP 102 (122)
Q Consensus 83 qnGrDTHIR~ikI~gp~~~~ 102 (122)
.--+|--+.|||...+.
T Consensus 134 ---~~lsL~EveVyg~~~~~ 150 (153)
T 4gwi_A 134 ---TPLSLAEVEVFRSATTQ 150 (153)
T ss_dssp ---BCCCEEEEEEEEBC---
T ss_pred ---CceEEEEEEEECccccc
Confidence 35788999999987654
No 20
>1k12_A Lectin; beta barrel, protein carbohydrate complex, sugar binding protein; HET: FUC; 1.90A {Anguilla anguilla} SCOP: b.18.1.15
Probab=34.12 E-value=1.1e+02 Score=20.96 Aligned_cols=82 Identities=9% Similarity=0.006 Sum_probs=45.2
Q ss_pred EeeeeeeeeeeecCCCC-CCCcceEEEEeCCCcCC--c-eEeeEEEEecC-ceeEEEEccCCCCCCCeEEEEEEEEEeec
Q 033290 6 VFVLKLVVLYVDFKLDE-SYTPSKISVRAGDGFHN--L-KEIKTVELVKP-TGWVYISLSGNDPRDTFVNTFMLQIVVLS 80 (122)
Q Consensus 6 ~v~I~~i~ly~d~~~DE-SYTP~~I~I~~G~~~~d--L-~ev~~v~l~~p-~GWv~i~l~~~~~~~~~l~~~~iQI~I~~ 80 (122)
...|.+|.|+-- .|. +---....|++|++..+ . ..+....-..+ .+...|.+. .+.+++||+|.+..
T Consensus 68 ~~~V~~V~i~~r--~d~~~~r~~~~~i~v~~s~~~~~~~n~~~~~~~~~~~g~~~~i~~~------~~~~gRYVrv~~~g 139 (158)
T 1k12_A 68 VYTITSVTITNR--GDCCGERISGAEINIGQHLASNGVNNPECSVIGSMATGETKTFHCP------APMIGRYVVTYLPT 139 (158)
T ss_dssp EEEEEEEEEEEC--SSSCTTTTTTCEEEEESSCTTTTTTSCEEEECCCCCTTCEEEEEEE------EEEEEEEEEEECCS
T ss_pred ceEEeEEEEEeC--CCcCccccCCEEEEEEcCCccccccCceeeeecccCCCCEEEEECC------CCCeeEEEEEEECC
Confidence 346777888742 231 11123346666665433 2 11211111112 234455552 25889999999975
Q ss_pred cccCCCCceeecEEEEccC
Q 033290 81 NHLNGRDTHVRQIKIYGPR 99 (122)
Q Consensus 81 NhqnGrDTHIR~ikI~gp~ 99 (122)
+ .--+|-.++|||..
T Consensus 140 ~----~~lsl~EveVyg~~ 154 (158)
T 1k12_A 140 S----ESLHLCEVEVNVDK 154 (158)
T ss_dssp S----SCCCEEEEEEEEEE
T ss_pred C----CeEEEEEEEEeccc
Confidence 5 45788899999854
No 21
>1czt_A Protein (coagulation factor V); membrane-binding, discoidin family, calcium- independent, blood clotting; 1.87A {Homo sapiens} SCOP: b.18.1.2 PDB: 1czs_A 1czv_A
Probab=29.90 E-value=1e+02 Score=21.25 Aligned_cols=28 Identities=7% Similarity=0.265 Sum_probs=21.8
Q ss_pred CeEEEEEEEEEeeccccCCCCceeecEEEEcc
Q 033290 67 TFVNTFMLQIVVLSNHLNGRDTHVRQIKIYGP 98 (122)
Q Consensus 67 ~~l~~~~iQI~I~~NhqnGrDTHIR~ikI~gp 98 (122)
.|+.+.||+|..++-|. ..-+| +.|||-
T Consensus 130 ~pi~ARyvRi~p~~w~~---~~~~R-~ElyGc 157 (160)
T 1czt_A 130 PPIISRFIRVIPKTWNQ---SITLR-LELFGC 157 (160)
T ss_dssp EEEEEEEEEEEEEEEES---SCEEE-EEEEEE
T ss_pred CCEEEEEEEEEEEEeCC---ceEEE-EEEEeE
Confidence 47899999999999873 34566 778874
No 22
>3alz_B CDW150; viral protein-receptor complex, six-bladed beta-propeller FO immunoglobulin fold, beta-sandwich, viral protein-membrane complex; HET: NAG; 4.51A {Saguinus oedipus}
Probab=29.75 E-value=41 Score=24.34 Aligned_cols=25 Identities=32% Similarity=0.704 Sum_probs=19.8
Q ss_pred cCceeEEEEccCCCCCCCeEEEEEEEEEe
Q 033290 50 KPTGWVYISLSGNDPRDTFVNTFMLQIVV 78 (122)
Q Consensus 50 ~p~GWv~i~l~~~~~~~~~l~~~~iQI~I 78 (122)
+-.||..++++.+ -....||+|+..
T Consensus 113 edEGwYfmtlEeN----~svq~FCLqLkL 137 (149)
T 3alz_B 113 KDEGWYFMTLEKN----ISVQRFCLHLKL 137 (149)
T ss_dssp GGCEEEEEEEECS----SEEEEECCEEEE
T ss_pred ccCceEEEEEecC----ccHHHHHHHHHH
Confidence 3579999999843 468999999875
No 23
>2wuh_A Discoidin domain receptor 2; receptor-peptide complex, transferase, nucleotide-binding, tyrosine-protein kinase; 1.60A {Homo sapiens} PDB: 2z4f_A
Probab=26.80 E-value=1.1e+02 Score=21.67 Aligned_cols=29 Identities=14% Similarity=0.433 Sum_probs=22.4
Q ss_pred CeEEEEEEEEEeeccccCCCCceeecEEEEcc
Q 033290 67 TFVNTFMLQIVVLSNHLNGRDTHVRQIKIYGP 98 (122)
Q Consensus 67 ~~l~~~~iQI~I~~NhqnGrDTHIR~ikI~gp 98 (122)
.|+.++||+|..++-| ++..-+| +.|||=
T Consensus 145 ~pi~ARyVRi~p~~w~--~~~i~lR-vElyGC 173 (178)
T 2wuh_A 145 PPIVARFVRFIPVTDH--SMNVCMR-VELYGC 173 (178)
T ss_dssp EEEEEEEEEEEEECSS--CBCCCBE-EEEEEE
T ss_pred CCeEEEEEEEEEEeec--CCCeEEE-EEEecc
Confidence 4799999999999877 3345677 888883
No 24
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=26.13 E-value=19 Score=22.95 Aligned_cols=18 Identities=17% Similarity=0.429 Sum_probs=15.3
Q ss_pred CCCCCCcceEEEEeCCCc
Q 033290 20 LDESYTPSKISVRAGDGF 37 (122)
Q Consensus 20 ~DESYTP~~I~I~~G~~~ 37 (122)
.|-.|.|..|.|.+|+..
T Consensus 21 ~~~~F~P~~i~v~~G~tV 38 (100)
T 4hci_A 21 NDDYFNPNVITIPINEST 38 (100)
T ss_dssp ETTEEESSEEEECTTSCE
T ss_pred ECCEEeCCEEEECCCCEE
Confidence 377899999999999654
No 25
>3hnm_A Putative chitobiase; PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, BTR319D.BT_411; 3.00A {Bacteroides thetaiotaomicron}
Probab=23.08 E-value=2e+02 Score=20.32 Aligned_cols=54 Identities=15% Similarity=0.010 Sum_probs=34.5
Q ss_pred CCcceEEEEeCCCcCCceEeeEEEEecCceeEEEEccCCCCCCCeEEEEEEEEEeecccc
Q 033290 24 YTPSKISVRAGDGFHNLKEIKTVELVKPTGWVYISLSGNDPRDTFVNTFMLQIVVLSNHL 83 (122)
Q Consensus 24 YTP~~I~I~~G~~~~dL~ev~~v~l~~p~GWv~i~l~~~~~~~~~l~~~~iQI~I~~Nhq 83 (122)
-+|.+..|++-++-.+...+.+.++.+. |-....+. ..+.+++||++.|++...
T Consensus 95 g~ik~~~I~~S~Dg~~W~~v~~~~~~~~-~~~~~~~~-----~~~~~aRYIR~~v~~g~~ 148 (172)
T 3hnm_A 95 GTSKAGYVEASIDNENWVKLKDWTSPKI-GEPNVNMD-----VPATQARYIRFVITDTYP 148 (172)
T ss_dssp CCEEEEEEEEESSSSCEEEEECCBCSST-TCSCEEEE-----EEEEEEEEEEEEEEEECC
T ss_pred CCeEEEEEEEEeCCCCeEEeEEEEecCC-CCceEEee-----cCCCceEEEEEEEccCcc
Confidence 4788899998777667776666655543 21111110 025789999999988654
No 26
>3bn6_A Lactadherin; anticoagulation, anti-coagulation, anticoagulant, anti- coagulant, membrane binding, phosphatidyl-serine binding; 1.67A {Bos taurus} PDB: 2pqs_A
Probab=22.27 E-value=1.9e+02 Score=19.66 Aligned_cols=27 Identities=19% Similarity=0.295 Sum_probs=19.1
Q ss_pred CeEEEEEEEEEeeccccCCCCceeecEEEEc
Q 033290 67 TFVNTFMLQIVVLSNHLNGRDTHVRQIKIYG 97 (122)
Q Consensus 67 ~~l~~~~iQI~I~~NhqnGrDTHIR~ikI~g 97 (122)
.|+.+.||+|...+.|. .--+| +.|||
T Consensus 131 ~pi~ARyVRi~p~~~~~---~~~lR-~ElyG 157 (158)
T 3bn6_A 131 TPFQARFVRIQPVAWHN---RITLR-VELLG 157 (158)
T ss_dssp EEEEEEEEEEEEEEEES---SCEEE-EEEEE
T ss_pred CCEEEEEEEEEEEEcCC---eeEEE-EEEEc
Confidence 47899999999998873 22344 55555
No 27
>2zxq_A Endo-alpha-N-acetylgalactosaminidase; broken TIM barrel, glycosidase, hydrolase; 2.00A {Bifidobacterium longum}
Probab=20.59 E-value=21 Score=34.26 Aligned_cols=70 Identities=13% Similarity=0.114 Sum_probs=0.0
Q ss_pred CcceEEEEeCC-CcCCceEeeEEEEecCceeEEEEccCCCCCCCeEEEEEEEEEeeccccCCC-----CceeecEEEEcc
Q 033290 25 TPSKISVRAGD-GFHNLKEIKTVELVKPTGWVYISLSGNDPRDTFVNTFMLQIVVLSNHLNGR-----DTHVRQIKIYGP 98 (122)
Q Consensus 25 TP~~I~I~~G~-~~~dL~ev~~v~l~~p~GWv~i~l~~~~~~~~~l~~~~iQI~I~~NhqnGr-----DTHIR~ikI~gp 98 (122)
.+....|.+-+ .-.++..+..-++....+|..+.+. .++++.||+|.+.+-+.++- =.-+.-|+||||
T Consensus 1301 ~VksYkIeVS~dDG~nWttVa~GTFsgn~t~kti~Fd------~PVkARYVRf~ats~~gg~g~~~Nk~aSIAEf~Vyg~ 1374 (1376)
T 2zxq_A 1301 KIKGYKITLTLADGTTKDVVTDAEFSTTTMWQKASFD------AVENVTAVRLTVLSSAGQSDSQANKFASAAELRLTTD 1374 (1376)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceEEEEEEEECCCCCeEEEEEeeEEcCCCceEEEEeC------CCceEEEEEEEEEEccCCCCccccceEEEEEEEEecc
Confidence 34444455444 3334444433233333345555554 46789999999998876532 357888999987
Q ss_pred CC
Q 033290 99 RP 100 (122)
Q Consensus 99 ~~ 100 (122)
++
T Consensus 1375 k~ 1376 (1376)
T 2zxq_A 1375 RE 1376 (1376)
T ss_dssp --
T ss_pred CC
Confidence 63
Done!