BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033291
(122 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CQU8|IMP1L_MOUSE Mitochondrial inner membrane protease subunit 1 OS=Mus musculus
GN=Immp1l PE=2 SV=1
Length = 166
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 76/118 (64%), Gaps = 5/118 (4%)
Query: 1 MLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPRRIVTKRVIGMEGDRVSYVADP 60
M PTI D+V AE +S F + GD+V+ +SP P+ + KRVIG+EGD++
Sbjct: 41 MEPTIQ-NSDIVFAENLSRHFYGIQRGDIVIAKSPSDPKSNICKRVIGLEGDKI---LST 96
Query: 61 KSSDKFET-VVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPKDFGSL 117
SD F++ VP GHVW+EGDN+ S DSR +G +PYGLI GR+F +IWP DFG L
Sbjct: 97 SPSDVFKSRSYVPTGHVWLEGDNLQNSTDSRYYGPIPYGLIRGRIFFKIWPFSDFGFL 154
>sp|Q96LU5|IMP1L_HUMAN Mitochondrial inner membrane protease subunit 1 OS=Homo sapiens
GN=IMMP1L PE=2 SV=1
Length = 166
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 77/118 (65%), Gaps = 5/118 (4%)
Query: 1 MLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPRRIVTKRVIGMEGDRVSYVADP 60
M PTI D+V AE +S F + GD+V+ +SP P+ + KRVIG+EGD++ +
Sbjct: 41 MEPTIQ-NSDIVFAENLSRHFYGIQRGDIVIAKSPSDPKSNICKRVIGLEGDKILTTS-- 97
Query: 61 KSSDKFET-VVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPKDFGSL 117
SD F++ VP GHVW+EGDN+ S DSR +G +PYGLI GR+F +IWP DFG L
Sbjct: 98 -PSDFFKSHSYVPMGHVWLEGDNLQNSTDSRCYGPIPYGLIRGRIFFKIWPLSDFGFL 154
>sp|Q28I39|IMP1L_XENTR Mitochondrial inner membrane protease subunit 1 OS=Xenopus
tropicalis GN=immp1l PE=2 SV=1
Length = 167
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 76/117 (64%), Gaps = 3/117 (2%)
Query: 1 MLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPRRIVTKRVIGMEGDRVSYVADP 60
M PTI D++L + +S F + GD+++ +SP P + KRVIG+EGD+V ++ P
Sbjct: 41 MEPTIR-NYDVLLCDNLSRHFFSIHKGDIIVAKSPDKPSVNICKRVIGLEGDKVC-MSSP 98
Query: 61 KSSDKFETVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPKDFGSL 117
+ K T V P+GHVW+EGDN+ S DSR +G VPY LI GR+ LR+WP + FG L
Sbjct: 99 SALLKRHTYV-PKGHVWLEGDNLDNSTDSRSYGPVPYALIRGRICLRVWPLESFGPL 154
>sp|O74800|IMP1_SCHPO Mitochondrial inner membrane protease subunit 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=imp1 PE=3 SV=1
Length = 157
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 73/111 (65%), Gaps = 5/111 (4%)
Query: 1 MLPTINLTGDLVLAERISTRFNKVCP-GDVVLVRSPVVPRRIVTKRVIGMEGDRVSYVAD 59
M+PT+N G+ VL +++ RF + C GDVV+ P ++ V KR+IGM GD + YV D
Sbjct: 36 MMPTLNSGGEFVLLDKLHGRFARSCSVGDVVVSAKPSDSKQHVCKRIIGMPGDTI-YV-D 93
Query: 60 PKSSDKFETVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWP 110
P SS+K + +P GHVW+ GDNI S DSR +G VP GLI+ +V R+WP
Sbjct: 94 PTSSNK--KITIPLGHVWLAGDNIAHSLDSRNYGPVPMGLIKAKVIARVWP 142
>sp|Q6AZD4|IMP2L_DANRE Mitochondrial inner membrane protease subunit 2 OS=Danio rerio
GN=immp2l PE=2 SV=1
Length = 183
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 64/115 (55%), Gaps = 9/115 (7%)
Query: 1 MLPTINLTG----DLVLAERISTRFNKVCPGDVVLVRSPVVPRRIVTKRVIGMEGDRVSY 56
M P++N G D+VL R S R V GD+V V SP P++ + KRVIG+EGD +
Sbjct: 43 MQPSLNPDGESSPDVVLLNRWSVRNYHVQRGDIVSVLSPKNPQQKIIKRVIGIEGDFIKT 102
Query: 57 VADPKSSDKFETVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPP 111
+ K V VP GH+WIEGD+ S DS FG V GL+ GR IWPP
Sbjct: 103 LGY-----KNRYVRVPDGHLWIEGDHHGHSFDSNAFGPVSLGLVHGRASHIIWPP 152
>sp|Q2KI92|IMP2L_BOVIN Mitochondrial inner membrane protease subunit 2 OS=Bos taurus
GN=IMMP2L PE=2 SV=1
Length = 177
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
Query: 1 MLPTINLTG----DLVLAERISTRFNKVCPGDVVLVRSPVVPRRIVTKRVIGMEGDRVSY 56
M P++N G D+VL R +V GD+V + SP P + + KRVI +EGD V
Sbjct: 44 MQPSLNPGGSQSSDVVLLNHWKVRNFEVQRGDIVSLVSPKNPEQKIIKRVIALEGDIVKT 103
Query: 57 VADPKSSDKFETVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPKDFGS 116
+ K V VP+GH+W+EGD+ S DS FG V GL+ +WPPK +
Sbjct: 104 MGH-----KNRYVKVPRGHIWVEGDHHGHSFDSNSFGPVSLGLLHAHATHILWPPKRWQK 158
Query: 117 L 117
L
Sbjct: 159 L 159
>sp|Q96T52|IMP2L_HUMAN Mitochondrial inner membrane protease subunit 2 OS=Homo sapiens
GN=IMMP2L PE=2 SV=1
Length = 175
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
Query: 1 MLPTINLTG----DLVLAERISTRFNKVCPGDVVLVRSPVVPRRIVTKRVIGMEGDRVSY 56
M P++N G D+VL R +V GD+V + SP P + + KRVI +EGD V
Sbjct: 44 MQPSLNPGGSQSSDVVLLNHWKVRNFEVHRGDIVSLVSPKNPEQKIIKRVIALEGDIVRT 103
Query: 57 VADPKSSDKFETVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPKDFGS 116
+ K V VP+GH+W+EGD+ S DS FG V GL+ +WPP+ +
Sbjct: 104 IGH-----KNRYVKVPRGHIWVEGDHHGHSFDSNSFGPVSLGLLHAHATHILWPPERWQK 158
Query: 117 L 117
L
Sbjct: 159 L 159
>sp|P46972|IMP2_YEAST Mitochondrial inner membrane protease subunit 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IMP2 PE=1
SV=1
Length = 177
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 10/122 (8%)
Query: 1 MLPTIN-----LTGDLVLAERISTRF-NKVCPGDVVLVRSPVVPRRIVTKRVIGMEGDRV 54
M PT+N L D VL + + + + D++L ++P PR++ KRV G+ D +
Sbjct: 42 MQPTLNPQTETLATDWVLLWKFGVKNPSNLSRDDIILFKAPTNPRKVYCKRVKGLPFDTI 101
Query: 55 SYVADPKSSDKFETVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPKDF 114
D K V +P+GH+W+EGDN + S DS FG + GL+ G+ +WPP +
Sbjct: 102 ----DTKFPYPKPQVNLPRGHIWVEGDNYFHSIDSNTFGPISSGLVIGKAITIVWPPSRW 157
Query: 115 GS 116
G+
Sbjct: 158 GT 159
>sp|Q5PQ63|IMP2L_XENLA Mitochondrial inner membrane protease subunit 2 OS=Xenopus laevis
GN=immp2l PE=2 SV=1
Length = 170
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 1 MLPTINLTG----DLVLAERISTRFNKVCPGDVVLVRSPVVPRRIVTKRVIGMEGDRVSY 56
M P++N D+VL R R V GD+V + SP P + + KRVI +EGD V
Sbjct: 41 MQPSLNPDARGESDIVLLNRWRARNYDVQRGDIVSLVSPKNPEQKIIKRVIALEGDIVKT 100
Query: 57 VADPKSSDKFETVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPKDFGS 116
+ K V VP+GHVW+EGD+ S DS FG V GL+ +WPP +
Sbjct: 101 LGH-----KNRYVKVPRGHVWVEGDHHGHSFDSNAFGPVSLGLLHSHATHILWPPNRWQK 155
Query: 117 L 117
L
Sbjct: 156 L 156
>sp|Q8BPT6|IMP2L_MOUSE Mitochondrial inner membrane protease subunit 2 OS=Mus musculus
GN=Immp2l PE=2 SV=1
Length = 175
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
Query: 1 MLPTINLTG----DLVLAERISTRFNKVCPGDVVLVRSPVVPRRIVTKRVIGMEGDRVSY 56
M P++N G D+VL R +V GD+V + SP P + + KRVI +EGD V
Sbjct: 44 MQPSLNPGGSQSSDVVLLNHWKVRNFEVQRGDIVSLVSPKNPEQKIIKRVIALEGDIVRT 103
Query: 57 VADPKSSDKFETVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPKDFGS 116
+ K V VP+GH+W+EGD+ S DS FG V GL+ +WPP+ +
Sbjct: 104 IGH-----KNRLVKVPRGHMWVEGDHHGHSFDSNSFGPVSLGLLHAHATHILWPPERWQR 158
Query: 117 L 117
L
Sbjct: 159 L 159
>sp|Q9UST2|IMP2L_SCHPO Mitochondrial inner membrane protease subunit 2
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC336.13c PE=3 SV=1
Length = 180
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 67/121 (55%), Gaps = 9/121 (7%)
Query: 1 MLPTINLTGDLVLAERIST-RFNK-VCPGDVVLVRSPVVPRRIVTKRVIGMEGDRVSYVA 58
M P N +++ +R+ ++NK GDVV++RSP P ++ KRV+G+E D +
Sbjct: 47 MKPAFNPETNMLQRDRVLLWKWNKDYKRGDVVILRSPENPEELLVKRVLGVEYD----IM 102
Query: 59 DPKSSDKFETVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPKDFGSLG 118
+ K V VP+GHVW+EGD + S DS KFG V GLI +V ++P F G
Sbjct: 103 KTRPPKKLSLVPVPEGHVWVEGDEQFHSIDSNKFGPVSTGLITAKVIAILFP---FSRAG 159
Query: 119 R 119
R
Sbjct: 160 R 160
>sp|P28627|IMP1_YEAST Mitochondrial inner membrane protease subunit 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IMP1 PE=1
SV=3
Length = 190
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 61/114 (53%), Gaps = 10/114 (8%)
Query: 1 MLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPRRIVTKRVIGMEGDRV------ 54
MLPT++ T D V + + GD ++ P P + KRV GM GD V
Sbjct: 41 MLPTLSATNDYVHVLKNFQNGRGIKMGDCIVALKPTDPNHRICKRVTGMPGDLVLVDPST 100
Query: 55 --SYVADPK-SSDKFETVV-VPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRV 104
+YV D ++F T + VP+GHVW+ GDN+ S DSR + A+P GLI G++
Sbjct: 101 IVNYVGDVLVDEERFGTYIKVPEGHVWVTGDNLSHSLDSRTYNALPMGLIMGKI 154
>sp|Q9M9Z2|TPP2_ARATH Probable thylakoidal processing peptidase 2, chloroplastic
OS=Arabidopsis thaliana GN=TPP2 PE=2 SV=1
Length = 367
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 23/134 (17%)
Query: 1 MLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVV-------PRRIVTKRVIGMEGDR 53
MLPT+++ GD V+AE++S F K D+V+ ++P + + KR++ EGD
Sbjct: 215 MLPTLDV-GDRVIAEKVSYFFRKPEVSDIVIFKAPPILVEHGYSCADVFIKRIVASEGDW 273
Query: 54 VS------YVADPKSSDKF---------ETVVVPQGHVWIEGDNIYESNDSRKFGAVPYG 98
V V D ++ F E + VP+G+V++ GDN +S DS +G +P
Sbjct: 274 VEVCDGKLLVNDTVQAEDFVLEPIDYEMEPMFVPEGYVFVLGDNRNKSFDSHNWGPLPIK 333
Query: 99 LIEGRVFLRIWPPK 112
I GR R WPP
Sbjct: 334 NIIGRSVFRYWPPS 347
>sp|Q8H0W1|PLSP1_ARATH Chloroplast processing peptidase OS=Arabidopsis thaliana GN=PLSP1
PE=2 SV=2
Length = 291
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 25/135 (18%)
Query: 1 MLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPRRI-------VTKRVIGMEGDR 53
M PT ++ GD ++AE++S F K C D+V+ +SP V + + KR++ EGD
Sbjct: 143 MYPTFDV-GDRLVAEKVSYYFRKPCANDIVIFKSPPVLQEVGYTDADVFIKRIVAKEGDL 201
Query: 54 VS----------------YVADPKSSDKFETVVVPQGHVWIEGDNIYESNDSRKFGAVPY 97
V ++ +P + + VP+ V++ GDN S DS +G +P
Sbjct: 202 VEVHNGKLMVNGVARNEKFILEPPGYE-MTPIRVPENSVFVMGDNRNNSYDSHVWGPLPL 260
Query: 98 GLIEGRVFLRIWPPK 112
I GR R WPP
Sbjct: 261 KNIIGRSVFRYWPPN 275
>sp|O04348|TPP1_ARATH Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis
thaliana GN=TPP1 PE=2 SV=2
Length = 340
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 28/137 (20%)
Query: 1 MLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVV----------PRRIVTKRVIGME 50
M PT++ GD V+AE++S F K D+V+ ++P + + KR++ E
Sbjct: 185 MYPTLD-KGDRVMAEKVSYFFRKPEVSDIVIFKAPPILLEYPEYGYSSNDVFIKRIVASE 243
Query: 51 GDRVS----------------YVADPKSSDKFETVVVPQGHVWIEGDNIYESNDSRKFGA 94
GD V +V +P S + E + VP+G+V++ GDN +S DS +G
Sbjct: 244 GDWVEVRDGKLFVNDIVQEEDFVLEPMSYE-MEPMFVPKGYVFVLGDNRNKSFDSHNWGP 302
Query: 95 VPYGLIEGRVFLRIWPP 111
+P I GR R WPP
Sbjct: 303 LPIENIVGRSVFRYWPP 319
>sp|P72660|LEP1_SYNY3 Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=lepB1 PE=3 SV=1
Length = 196
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 1 MLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPR-------RIVTKRVIGMEGDR 53
MLPT+ GD ++ E++S F+ GD+++ P + + + KRVI + G
Sbjct: 45 MLPTLE-QGDRLVVEKVSYHFHPPQVGDIIVFHPPELLQVQGYDLGQAFIKRVIALPGQT 103
Query: 54 VS----------------YVADPKSSDKFETVVVPQGHVWIEGDNIYESNDSRKFGAVPY 97
V Y+ +P + V VP G V++ GDN SNDS +G +P
Sbjct: 104 VEVNNGIVYRDGQPLQEEYILEPPQYN-LPAVRVPDGQVFVMGDNRNNSNDSHVWGFLPQ 162
Query: 98 GLIEGRVFLRIWPPKDFGSLG 118
I G R +P +G LG
Sbjct: 163 QNIIGHALFRFFPASRWGQLG 183
>sp|P41027|LEP_BACCL Signal peptidase I OS=Bacillus caldolyticus GN=lepB PE=3 SV=1
Length = 182
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 32/144 (22%)
Query: 1 MLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPRRIVTKRVIGMEGDRVSYVAD- 59
M+PT+ +G+L++ ++S + D+++ + + KRVIG+ GDR++Y D
Sbjct: 39 MMPTLE-SGNLLIVNKLSYDIGPIRRFDIIVFHAN--KKEDYVKRVIGLPGDRIAYKNDI 95
Query: 60 ----PKSSDK--------------------FETVV----VPQGHVWIEGDNIYESNDSRK 91
K D+ E V VP G +++ GDN S DSR
Sbjct: 96 LYVNGKKVDEPYLRPYKQKLLDGRLTGDFTLEEVTGKTRVPPGCIFVLGDNRLSSWDSRH 155
Query: 92 FGAVPYGLIEGRVFLRIWPPKDFG 115
FG V I G+V R WP K F
Sbjct: 156 FGFVKINQIVGKVDFRYWPFKQFA 179
>sp|P73157|LEP2_SYNY3 Probable signal peptidase I-2 OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=lepB2 PE=3 SV=1
Length = 218
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 62/143 (43%), Gaps = 23/143 (16%)
Query: 1 MLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPRR-----IVTKRVIGMEGDRV- 54
M PT+ + L++ E+IS R G++V+ + KR+IG+ GD V
Sbjct: 53 MEPTLQINDRLII-EKISYRLRDPERGEIVVFNPTDALKAKNFHDAFIKRIIGLPGDEVR 111
Query: 55 ---------------SYVADPKSSDKFETVVVPQGHVWIEGDNIYESNDSRKFGAVPYGL 99
+Y+A P + + + V VP + GDN S DS +G VP
Sbjct: 112 VSQGNVYVNGKMLDENYIAAPPAYE-YGPVKVPDDQYLVLGDNRNNSYDSHYWGFVPREK 170
Query: 100 IEGRVFLRIWPPKDFGSLGRRAE 122
+ GR F+R WP G L AE
Sbjct: 171 LLGRAFVRFWPVPRVGLLTDDAE 193
>sp|Q51876|LEP_PHOLA Signal peptidase I OS=Phormidium laminosum GN=lepB PE=3 SV=1
Length = 203
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 63/142 (44%), Gaps = 27/142 (19%)
Query: 1 MLPTINLTGDLVLAERISTRFNKVCPGDVVLV--------RSPVVPRRIVTKRVIGMEGD 52
MLPT+ + D ++ E+IS FN GD+++ ++P + + KRVIG+ G+
Sbjct: 60 MLPTLEVN-DRLIVEKISYHFNPPRRGDIIVFHPTEALKQQNPSLNEAFI-KRVIGLPGE 117
Query: 53 RV----------------SYVADPKSSDKFETVVVPQGHVWIEGDNIYESNDSRKFGAVP 96
V +Y+ P ++ VP + GDN S DS +G VP
Sbjct: 118 TVQVTGGRVLINGQPLEENYIQSPPDY-QWGPEKVPADSFLVLGDNRNNSYDSHFWGYVP 176
Query: 97 YGLIEGRVFLRIWPPKDFGSLG 118
I GR +R WP G LG
Sbjct: 177 RQNIIGRAVVRFWPVNRLGELG 198
>sp|Q10789|LEP_MYCTU Signal peptidase I OS=Mycobacterium tuberculosis GN=lepB PE=1 SV=1
Length = 294
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 67/187 (35%), Gaps = 72/187 (38%)
Query: 1 MLPTIN----LTGDLVLAERISTRFNKVCPGDVVLVRSP--------------------- 35
M PT++ GD ++ +++S RF PGDV++ R P
Sbjct: 97 MEPTLHGCSTCVGDRIMVDKLSYRFGSPQPGDVIVFRGPPSWNVGYKSIRSHNVAVRWVQ 156
Query: 36 -------VVP--RRIVTKRVIGMEG-----------------------DRVSYVADPK-- 61
VP + KRVI + G D + +ADP
Sbjct: 157 NALSFIGFVPPDENDLVKRVIAVGGQTVQCRSDTGLTVNGRPLKEPYLDPATMMADPSIY 216
Query: 62 --SSDKFETVVVPQGHVWIEGDNIYESNDSRKF-----------GAVPYGLIEGRVFLRI 108
+F V VP G VW+ GDN S DSR G VP + G+ L +
Sbjct: 217 PCLGSEFGPVTVPPGRVWVMGDNRTHSADSRAHCPLLCTDDPLPGTVPVANVIGKARLIV 276
Query: 109 WPPKDFG 115
WPP +G
Sbjct: 277 WPPSRWG 283
>sp|O33021|LEP_MYCLE Probable signal peptidase I OS=Mycobacterium leprae (strain TN)
GN=lepB PE=3 SV=1
Length = 289
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 71/197 (36%), Gaps = 79/197 (40%)
Query: 1 MLPTIN----LTGDLVLAERISTRFNKVCPGDVVLVRSP--------------VVPRRI- 41
M PT++ GD ++ ++I+ RF+ PGDV++ + P +V R +
Sbjct: 85 MEPTLHGCSGCVGDRIMVDKITYRFSSPQPGDVIVFKGPPSWNTMYKSIRSNNIVLRSVQ 144
Query: 42 ---------------VTKRVIGMEGDRVSYVAD--------------------------- 59
+ KRVI + G V +D
Sbjct: 145 NALSFVGFVPPDENDLVKRVIAVGGQTVQCRSDTGLTVNGKPLKEPYLRPVTMNADLSFS 204
Query: 60 PKSSDKFETVVVPQGHVWIEGDNIYESNDSR------------------KFGAVPYGLIE 101
P +F V VPQG +W+ GDN S DSR G VP +
Sbjct: 205 PCLGSEFGPVTVPQGRLWVMGDNRIHSADSRYHCNSTDVVNGLSCTGDPNSGTVPVSNVI 264
Query: 102 GRVFLRIWPPKDFGSLG 118
G+ + +WPP +G +G
Sbjct: 265 GKARVVVWPPSRWGGVG 281
>sp|O07560|LEPV_BACSU Signal peptidase I V OS=Bacillus subtilis (strain 168) GN=sipV PE=2
SV=1
Length = 168
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 55/124 (44%), Gaps = 32/124 (25%)
Query: 1 MLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPRRIVTKRVIGMEGDRVSY---- 56
M PT G+ +L + S RF + D+VL + P +++ KRVIG+ G+ + Y
Sbjct: 35 MNPTFQ-EGNELLVNKFSHRFKTIHRFDIVLFKGP--DHKVLIKRVIGLPGETIKYKDDQ 91
Query: 57 -------VADP-----KS-------------SDKFETVVVPQGHVWIEGDNIYESNDSRK 91
VA+P KS D T VP+G ++ GDN S DSR
Sbjct: 92 LYVNGKQVAEPFLKHLKSVSAGSHVTGDFSLKDVTGTSKVPKGKYFVVGDNRIYSFDSRH 151
Query: 92 FGAV 95
FG +
Sbjct: 152 FGPI 155
>sp|Q6GIC4|LEPH_STAAR Inactive signal peptidase IA OS=Staphylococcus aureus (strain
MRSA252) GN=spsA PE=3 SV=1
Length = 174
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 27/133 (20%)
Query: 1 MLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPRRIVTKRVIGMEG--------- 51
M PT+N GD V+ +I FN++ GD++ R I T R+I G
Sbjct: 36 MSPTLN-KGDRVIVNKIKVTFNQLNNGDIITYRRG---NEIYTSRIIAKPGQSMAFRQGQ 91
Query: 52 ----DR---VSYVADPKSSD-------KFETVVVPQGHVWIEGDNIYESNDSRKFGAVPY 97
DR SY + K D K + ++P + + D+ +DSR+FG +
Sbjct: 92 LYRDDRPVDASYAKNRKIKDFSLRNFKKLDGDIIPPNNFVVLNDHDNNQHDSRQFGLIDK 151
Query: 98 GLIEGRVFLRIWP 110
I G + LR +P
Sbjct: 152 KDIIGNISLRYYP 164
>sp|P0A065|LEPH_STAAW Inactive signal peptidase IA OS=Staphylococcus aureus (strain MW2)
GN=spsA PE=3 SV=1
Length = 174
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 27/133 (20%)
Query: 1 MLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPRRIVTKRVIGMEG--------- 51
M PT+N GD V+ +I FN++ GD++ R I T R+I G
Sbjct: 36 MSPTLN-KGDRVIVNKIKVTFNQLNNGDIITYRRG---NEIYTSRIIAKPGQSMAFRQGQ 91
Query: 52 ----DR---VSYVADPKSSD-------KFETVVVPQGHVWIEGDNIYESNDSRKFGAVPY 97
DR SY + K D + + ++P + + D+ +DSR+FG +
Sbjct: 92 LYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFVVLNDHDNNQHDSRQFGLIDK 151
Query: 98 GLIEGRVFLRIWP 110
I G + LR +P
Sbjct: 152 KDIIGNISLRYYP 164
>sp|P0A066|LEPH_STAAU Inactive signal peptidase IA OS=Staphylococcus aureus GN=spsA PE=3
SV=1
Length = 174
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 27/133 (20%)
Query: 1 MLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPRRIVTKRVIGMEG--------- 51
M PT+N GD V+ +I FN++ GD++ R I T R+I G
Sbjct: 36 MSPTLN-KGDRVIVNKIKVTFNQLNNGDIITYRRG---NEIYTSRIIAKPGQSMAFRQGQ 91
Query: 52 ----DR---VSYVADPKSSD-------KFETVVVPQGHVWIEGDNIYESNDSRKFGAVPY 97
DR SY + K D + + ++P + + D+ +DSR+FG +
Sbjct: 92 LYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFVVLNDHDNNQHDSRQFGLIDK 151
Query: 98 GLIEGRVFLRIWP 110
I G + LR +P
Sbjct: 152 KDIIGNISLRYYP 164
>sp|Q6GAW2|LEPH_STAAS Inactive signal peptidase IA OS=Staphylococcus aureus (strain
MSSA476) GN=spsA PE=3 SV=1
Length = 174
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 27/133 (20%)
Query: 1 MLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPRRIVTKRVIGMEG--------- 51
M PT+N GD V+ +I FN++ GD++ R I T R+I G
Sbjct: 36 MSPTLN-KGDRVIVNKIKVTFNQLNNGDIITYRRG---NEIYTSRIIAKPGQSMAFRQGQ 91
Query: 52 ----DR---VSYVADPKSSD-------KFETVVVPQGHVWIEGDNIYESNDSRKFGAVPY 97
DR SY + K D + + ++P + + D+ +DSR+FG +
Sbjct: 92 LYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFVVLNDHDNNQHDSRQFGLIDK 151
Query: 98 GLIEGRVFLRIWP 110
I G + LR +P
Sbjct: 152 KDIIGNISLRYYP 164
>sp|P0A064|LEPH_STAAN Inactive signal peptidase IA OS=Staphylococcus aureus (strain N315)
GN=spsA PE=3 SV=1
Length = 174
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 27/133 (20%)
Query: 1 MLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPRRIVTKRVIGMEG--------- 51
M PT+N GD V+ +I FN++ GD++ R I T R+I G
Sbjct: 36 MSPTLN-KGDRVIVNKIKVTFNQLNNGDIITYRRG---NEIYTSRIIAKPGQSMAFRQGQ 91
Query: 52 ----DR---VSYVADPKSSD-------KFETVVVPQGHVWIEGDNIYESNDSRKFGAVPY 97
DR SY + K D + + ++P + + D+ +DSR+FG +
Sbjct: 92 LYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFVVLNDHDNNQHDSRQFGLIDK 151
Query: 98 GLIEGRVFLRIWP 110
I G + LR +P
Sbjct: 152 KDIIGNISLRYYP 164
>sp|P0A063|LEPH_STAAM Inactive signal peptidase IA OS=Staphylococcus aureus (strain Mu50
/ ATCC 700699) GN=spsA PE=3 SV=1
Length = 174
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 27/133 (20%)
Query: 1 MLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPRRIVTKRVIGMEG--------- 51
M PT+N GD V+ +I FN++ GD++ R I T R+I G
Sbjct: 36 MSPTLN-KGDRVIVNKIKVTFNQLNNGDIITYRRG---NEIYTSRIIAKPGQSMAFRQGQ 91
Query: 52 ----DR---VSYVADPKSSD-------KFETVVVPQGHVWIEGDNIYESNDSRKFGAVPY 97
DR SY + K D + + ++P + + D+ +DSR+FG +
Sbjct: 92 LYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFVVLNDHDNNQHDSRQFGLIDK 151
Query: 98 GLIEGRVFLRIWP 110
I G + LR +P
Sbjct: 152 KDIIGNISLRYYP 164
>sp|Q5HHC0|LEPH_STAAC Inactive signal peptidase IA OS=Staphylococcus aureus (strain COL)
GN=spsA PE=3 SV=1
Length = 174
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 27/133 (20%)
Query: 1 MLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPRRIVTKRVIGMEG--------- 51
M PT+N GD V+ +I FN++ GD++ R I T R+I G
Sbjct: 36 MSPTLN-KGDRVIVNKIKVTFNQLNNGDIITYRRG---NEIYTSRIIAKPGQSMAFRQGQ 91
Query: 52 ----DR---VSYVADPKSSD-------KFETVVVPQGHVWIEGDNIYESNDSRKFGAVPY 97
DR SY + K D + + ++P + + D +DSR+FG +
Sbjct: 92 LYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFVVLNDQDNNKHDSRQFGLIDK 151
Query: 98 GLIEGRVFLRIWP 110
I G V LR +P
Sbjct: 152 KDIIGNVSLRYYP 164
>sp|P0A069|LEP_STAAW Signal peptidase IB OS=Staphylococcus aureus (strain MW2) GN=spsB
PE=3 SV=1
Length = 191
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 58 ADPKSSDKFETVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPKDF 114
A+PKS+ V+P+G + GDN S DSR FG + I G+V R WP +F
Sbjct: 130 ANPKSN------VIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSEF 180
>sp|P0A070|LEP_STAAU Signal peptidase IB OS=Staphylococcus aureus GN=spsB PE=3 SV=1
Length = 191
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 58 ADPKSSDKFETVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPKDF 114
A+PKS+ V+P+G + GDN S DSR FG + I G+V R WP +F
Sbjct: 130 ANPKSN------VIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSEF 180
>sp|Q6GAW1|LEP_STAAS Signal peptidase IB OS=Staphylococcus aureus (strain MSSA476)
GN=spsB PE=3 SV=1
Length = 191
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 58 ADPKSSDKFETVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPKDF 114
A+PKS+ V+P+G + GDN S DSR FG + I G+V R WP +F
Sbjct: 130 ANPKSN------VIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSEF 180
>sp|P0A068|LEP_STAAN Signal peptidase IB OS=Staphylococcus aureus (strain N315) GN=spsB
PE=1 SV=1
Length = 191
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 58 ADPKSSDKFETVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPKDF 114
A+PKS+ V+P+G + GDN S DSR FG + I G+V R WP +F
Sbjct: 130 ANPKSN------VIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSEF 180
>sp|P0A067|LEP_STAAM Signal peptidase IB OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=spsB PE=3 SV=1
Length = 191
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 58 ADPKSSDKFETVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPKDF 114
A+PKS+ V+P+G + GDN S DSR FG + I G+V R WP +F
Sbjct: 130 ANPKSN------VIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSEF 180
>sp|Q6GIC3|LEP_STAAR Signal peptidase IB OS=Staphylococcus aureus (strain MRSA252)
GN=spsB PE=3 SV=1
Length = 191
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 58 ADPKSSDKFETVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPKDF 114
A+PKS+ V+P+G + GDN S DSR FG + I G+V R WP +F
Sbjct: 130 ANPKSN------VIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSEF 180
>sp|Q5HHB9|LEP_STAAC Signal peptidase IB OS=Staphylococcus aureus (strain COL) GN=spsB
PE=3 SV=2
Length = 191
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 58 ADPKSSDKFETVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPKDF 114
A+PKS+ V+P+G + GDN S DSR FG + I G+V R WP +F
Sbjct: 130 ANPKSN------VIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSEF 180
>sp|O67088|LEP_AQUAE Signal peptidase I OS=Aquifex aeolicus (strain VF5) GN=lepB PE=3
SV=1
Length = 256
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 70 VVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPK 112
VVP+G+ ++ GDN S DSR +G VP IEG+ F+ + K
Sbjct: 177 VVPEGYYFVMGDNRDNSQDSRFWGFVPRENIEGKAFVIYYSGK 219
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 1 MLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPRRIVTKRVIGMEGDRVSY 56
M PT+ L GD +L ++ ++ GD+++ + P P KR+I GD V +
Sbjct: 33 MEPTL-LVGDFILVNKLVYSLSEPMRGDMIVFKYPKNPDIDFIKRIIARGGDTVEF 87
>sp|P00803|LEP_ECOLI Signal peptidase I OS=Escherichia coli (strain K12) GN=lepB PE=1
SV=2
Length = 324
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 15/76 (19%)
Query: 1 MLPTINLTGDLVLAERIS----------TRFNKVCP--GDVVLVRSPVVPRRIVTKRVIG 48
M+PT+ L GD +L E+ + T P GD+V+ + P P+ KR +G
Sbjct: 92 MMPTL-LIGDFILVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVG 150
Query: 49 MEGDRVSYVADPKSSD 64
+ GD+V+Y DP S +
Sbjct: 151 LPGDKVTY--DPVSKE 164
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 37 VPRRIVTKRVIGMEGDRVS-YVADPKSSDKFETVVVPQGHVWIEGDNIYESNDSRKFGAV 95
V RI+T + + D+V Y P + T +VP G ++ GDN S DSR +G V
Sbjct: 234 VTHRILT---VPIAQDQVGMYYQQP--GQQLATWIVPPGQYFMMGDNRDNSADSRYWGFV 288
Query: 96 PYGLIEGRVFLRIW 109
P + GR IW
Sbjct: 289 PEANLVGRA-TAIW 301
>sp|P57347|LEP_BUCAI Signal peptidase I OS=Buchnera aphidicola subsp. Acyrthosiphon
pisum (strain APS) GN=lepB PE=3 SV=1
Length = 314
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 13/68 (19%)
Query: 1 MLPTINLTGDLVLAERIS------------TRFNKVCPGDVVLVRSPVVPRRIVTKRVIG 48
M+PT+ L GD +L E+ S R K GD+ + + P KR+IG
Sbjct: 89 MMPTL-LVGDFILVEKFSYGIKEPITHKILIRTKKPNRGDIAVFQHPTDHNINYIKRIIG 147
Query: 49 MEGDRVSY 56
+ GD++ Y
Sbjct: 148 LPGDKIRY 155
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 68 TVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPKD 113
T +VP+G ++ GDN S DSR +G VP + G+ ++IW D
Sbjct: 251 TWIVPKGEYFMMGDNRDNSLDSRYWGFVPEKNLVGKA-IKIWMSFD 295
>sp|P0A1W2|LEP_SALTY Signal peptidase I OS=Salmonella typhimurium (strain LT2 / SGSC1412
/ ATCC 700720) GN=lepB PE=3 SV=1
Length = 324
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 15/76 (19%)
Query: 1 MLPTINLTGDLVLAERIS----------TRFNKVCP--GDVVLVRSPVVPRRIVTKRVIG 48
M+PT+ L GD +L E+ + T P GD+V+ + P P+ KR +G
Sbjct: 92 MMPTL-LIGDFILVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVG 150
Query: 49 MEGDRVSYVADPKSSD 64
+ GD+++Y DP + +
Sbjct: 151 LPGDKITY--DPVAKE 164
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 68 TVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIW 109
T VVP G ++ GDN S DSR +G VP + G+ + IW
Sbjct: 261 TWVVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGKA-VAIW 301
>sp|P0A1W3|LEP_SALTI Signal peptidase I OS=Salmonella typhi GN=lepB PE=3 SV=1
Length = 324
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 15/76 (19%)
Query: 1 MLPTINLTGDLVLAERIS----------TRFNKVCP--GDVVLVRSPVVPRRIVTKRVIG 48
M+PT+ L GD +L E+ + T P GD+V+ + P P+ KR +G
Sbjct: 92 MMPTL-LIGDFILVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVG 150
Query: 49 MEGDRVSYVADPKSSD 64
+ GD+++Y DP + +
Sbjct: 151 LPGDKITY--DPVAKE 164
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 68 TVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIW 109
T VVP G ++ GDN S DSR +G VP + G+ + IW
Sbjct: 261 TWVVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGKA-VAIW 301
>sp|P26844|LEP_PSEFL Signal peptidase I OS=Pseudomonas fluorescens GN=lepB PE=3 SV=1
Length = 284
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 62/175 (35%), Gaps = 68/175 (38%)
Query: 1 MLPTINLTGDLVLAERISTRF------NKVCP------GDVVLVRSPVVPRRIVTKRVIG 48
M PT+++ GD +L + S KV GDV++ R P P KRV+G
Sbjct: 91 MKPTLDV-GDFILVNKFSYGIRLPVIDKKVIEVGDPQRGDVMVFRYPSDPNVNYIKRVVG 149
Query: 49 MEGDRVSYVADPKSSDKFETVV-------------------------------------- 70
+ GD V Y +D + E+V
Sbjct: 150 LPGDVVRYTSDKRLFINGESVAEKLLGAEPNTLGSAELYQEKLGAVEHEIRKEMSRYRAM 209
Query: 71 ------VPQGHVWIEGDNIYESNDSRKF----------GAVPYGLIEGRVFLRIW 109
VP GH ++ GDN SNDSR + G VP I G+ F +W
Sbjct: 210 PDGQWKVPAGHYFMMGDNRDNSNDSRYWDDPNIPKDLLGMVPDENIVGKAF-AVW 263
>sp|Q1LL91|GLO2_RALME Hydroxyacylglutathione hydrolase OS=Ralstonia metallidurans (strain
CH34 / ATCC 43123 / DSM 2839) GN=gloB PE=3 SV=1
Length = 266
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 39/99 (39%), Gaps = 17/99 (17%)
Query: 2 LPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPRRIVTKRVIGMEGDRVSYVADPK 61
LP I G ERI R V GD V +R P V R++ V G V+YV D
Sbjct: 78 LPVIGPQG-----ERIGHRTQAVREGDTVTLRHPAVTFRVLD--VPGHTAGHVAYVGDLP 130
Query: 62 SSDKFETVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLI 100
+ G V GD ++ S R F P ++
Sbjct: 131 GA----------GPVVFCGDTLFASGCGRLFEGTPAQML 159
>sp|Q06967|14336_ORYSJ 14-3-3-like protein GF14-F OS=Oryza sativa subsp. japonica GN=GF14F
PE=1 SV=2
Length = 260
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 16 RISTRFNKVCPGDVVLVRSPVVPRRIVTKR---VIGMEGDRVSYVADPKS 62
RI T +K+C G + L+ S +VP + + M+GD Y+A+ KS
Sbjct: 94 RIETELSKICDGILKLLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKS 143
>sp|Q9I5G7|LEP_PSEAE Signal peptidase I OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=lepB PE=3 SV=1
Length = 284
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 62/185 (33%), Gaps = 69/185 (37%)
Query: 1 MLPTINLTGDLVLAE------RISTRFNKVCP------GDVVLVRSPVVPRRIVTKRVIG 48
M PT+ + GD +L R+ KV P GDV++ R P P KRV+G
Sbjct: 91 MKPTLEV-GDFILVNKFAYGIRLPVLDTKVIPIGDPQRGDVMVFRYPSEPNINYIKRVVG 149
Query: 49 MEGDRVSYVADPKSSDKFETVV-------------------------------------- 70
+ GD V Y + + E V
Sbjct: 150 LPGDTVRYTKEKRLYVNGELVAEKLVGEEPGTLGSVTLYQEKLGQAEHLIRKEMSRYRIE 209
Query: 71 ------VPQGHVWIEGDNIYESNDSRKF----------GAVPYGLIEGRVFL--RIWPPK 112
+P GH ++ GDN SNDSR + G VP I G+ F WP
Sbjct: 210 PDRQWTIPAGHYFMMGDNRDNSNDSRYWNDPKIPKDLLGMVPDRNIVGKAFAVWMSWPDP 269
Query: 113 DFGSL 117
+L
Sbjct: 270 KMSNL 274
>sp|O07344|LEP_STRPN Signal peptidase I OS=Streptococcus pneumoniae serotype 4 (strain
ATCC BAA-334 / TIGR4) GN=lepB PE=3 SV=2
Length = 204
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 68 TVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPKDFGSL 117
+ VP+G + GD+ S+DSR G I G R+WP G+
Sbjct: 155 SFTVPEGEYLLLGDDRLVSSDSRHVGTFKAKDITGEAKFRLWPITRIGTF 204
>sp|P48348|14338_ARATH 14-3-3-like protein GF14 kappa OS=Arabidopsis thaliana GN=GRF8 PE=2
SV=2
Length = 248
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 16 RISTRFNKVCPGDVVLVRSPVVPRRIVTKR---VIGMEGDRVSYVADPKSSDKFETVV 70
++ T + +C G + L+ S ++P ++ + M+GD Y+A+ KS D+ +T
Sbjct: 94 KVETELSSICSGILRLLDSHLIPSATASESKVFYLKMKGDYHRYLAEFKSGDERKTAA 151
>sp|Q89AM6|LEP_BUCBP Signal peptidase I OS=Buchnera aphidicola subsp. Baizongia
pistaciae (strain Bp) GN=lepB PE=3 SV=1
Length = 310
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 13/68 (19%)
Query: 1 MLPTINLTGDLVLAERIS------------TRFNKVCPGDVVLVRSPVVPRRIVTKRVIG 48
M+PT+ L GD +L ++ S N GD+V+ + P KR++G
Sbjct: 83 MMPTL-LPGDFILVKKFSYGIKNPFSNNVIVFINTPKRGDIVVFKHPNNNAINYVKRIVG 141
Query: 49 MEGDRVSY 56
+ GD+++Y
Sbjct: 142 LPGDKINY 149
>sp|P59662|LEP_STRR6 Signal peptidase I OS=Streptococcus pneumoniae (strain ATCC BAA-255
/ R6) GN=lepB PE=3 SV=1
Length = 204
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 22/50 (44%)
Query: 68 TVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPKDFGSL 117
+ VP+G + GD+ S+DSR G I G R WP G+
Sbjct: 155 SFTVPEGEYLLLGDDRLVSSDSRHVGTFKAKDITGEAKFRFWPITRIGTF 204
>sp|Q8K9R0|LEP_BUCAP Signal peptidase I OS=Buchnera aphidicola subsp. Schizaphis
graminum (strain Sg) GN=lepB PE=3 SV=1
Length = 312
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 14/68 (20%)
Query: 1 MLPTINLTGDLVLAERIS------------TRFNKVCPGDVVLVRSPVVPRRIVTKRVIG 48
M+PT+ L GD +L ++ S + N GD+V+ + P + KRV+G
Sbjct: 89 MMPTL-LIGDFILVKKFSYGIKEPITNKTIIKMNLPQRGDIVVFKHPKNNIDYI-KRVVG 146
Query: 49 MEGDRVSY 56
+ GD++ Y
Sbjct: 147 LPGDKIQY 154
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.142 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,547,074
Number of Sequences: 539616
Number of extensions: 1968316
Number of successful extensions: 3633
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 3538
Number of HSP's gapped (non-prelim): 83
length of query: 122
length of database: 191,569,459
effective HSP length: 89
effective length of query: 33
effective length of database: 143,543,635
effective search space: 4736939955
effective search space used: 4736939955
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)