BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 033295
         (122 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|2EJ7|A Chain A, Solution Structure Of The Dnaj Domain Of The Human
          Protein Hcg3, A Hypothetical Protein Tmp_locus_21
          Length = 82

 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/42 (57%), Positives = 29/42 (69%), Gaps = 3/42 (7%)

Query: 1  MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
          +KWHPD   KNP    EA+ RF+Q+ EAY VLSD  KR +YD
Sbjct: 35 LKWHPD---KNPENKEEAERRFKQVAEAYEVLSDAKKRDIYD 73


>pdb|2DMX|A Chain A, Solution Structure Of The J Domain Of Dnaj Homolog
          Subfamily B Member 8
          Length = 92

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 29/42 (69%), Gaps = 3/42 (7%)

Query: 1  MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
          ++WHPD   KNP    EA+ +F+ + EAY VLSD  KRS+YD
Sbjct: 35 LRWHPD---KNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYD 73


>pdb|1XBL|A Chain A, Nmr Structure Of The J-Domain (Residues 2-76) In The
          Escherichia Coli N-Terminal Fragment (Residues 2-108)
          Of The Molecular Chaperone Dnaj, 20 Structures
          Length = 107

 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 30/42 (71%), Gaps = 4/42 (9%)

Query: 1  MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
          MK+HPDR+  +     EA+ +F++I+EAY VL+D  KR+ YD
Sbjct: 29 MKYHPDRNQGDK----EAEAKFKEIKEAYEVLTDSQKRAAYD 66


>pdb|1BQ0|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli
          N-Terminal Fragment (Residues 1-104) Of The Molecular
          Chaperone Dnaj, Nmr, 20 Structures
          Length = 103

 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 30/42 (71%), Gaps = 4/42 (9%)

Query: 1  MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
          MK+HPDR+  +     EA+ +F++I+EAY VL+D  KR+ YD
Sbjct: 29 MKYHPDRNQGDK----EAEAKFKEIKEAYEVLTDSQKRAAYD 66


>pdb|1BQZ|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli
          N-Terminal Fragment (Residues 1-78) Of The Molecular
          Chaperone Dnaj, Nmr, 20 Structures
          Length = 77

 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 30/42 (71%), Gaps = 4/42 (9%)

Query: 1  MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
          MK+HPDR+  +     EA+ +F++I+EAY VL+D  KR+ YD
Sbjct: 29 MKYHPDRNQGDK----EAEAKFKEIKEAYEVLTDSQKRAAYD 66


>pdb|2LGW|A Chain A, Solution Structure Of The J Domain Of Hsj1a
          Length = 99

 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 30/42 (71%), Gaps = 3/42 (7%)

Query: 1  MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
          ++WHPD   KNP     A+ +F+++ EAY VLSD++KR +YD
Sbjct: 28 LQWHPD---KNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYD 66


>pdb|2CTW|A Chain A, Solution Structure Of J-Domain From Mouse Dnaj Subfamily
          C Menber 5
          Length = 109

 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 33/50 (66%), Gaps = 8/50 (16%)

Query: 1  MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDA----GLY 46
          +K+HPD++  NP    EA  +F++I  A+++L+D  KR++YD     GLY
Sbjct: 43 LKYHPDKNPDNP----EAADKFKEINNAHAILTDATKRNIYDKYGSLGLY 88


>pdb|2DN9|A Chain A, Solution Structure Of J-Domain From The Dnaj Homolog,
          Human Tid1 Protein
          Length = 79

 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 4/42 (9%)

Query: 2  KWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDA 43
          K+HPD +  +P    +AK +F Q+ EAY VLSDE KR  YDA
Sbjct: 34 KYHPDTNKDDP----KAKEKFSQLAEAYEVLSDEVKRKQYDA 71


>pdb|2OCH|A Chain A, J-domain Of Dnj-12 From Caenorhabditis Elegans
          Length = 73

 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 7/44 (15%)

Query: 1  MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAG 44
          +K+HPD   KNP  A +    F+QI +AY VLSDE KR +YD G
Sbjct: 34 LKFHPD---KNPDGAEQ----FKQISQAYEVLSDEKKRQIYDQG 70


>pdb|2LO1|A Chain A, Nmr Structure Of The Protein Bc008182, A Dnaj-Like
          Domain From Homo Sapiens
          Length = 71

 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 7/44 (15%)

Query: 1  MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAG 44
          +K+HPD   KNP   GE   +F+QI +AY VLSD  KR +YD G
Sbjct: 32 LKYHPD---KNPN-EGE---KFKQISQAYEVLSDAKKRELYDKG 68


>pdb|2CUG|A Chain A, Solution Structure Of The J Domain Of The Pseudo Dnaj
          Protein, Mouse Hypothetical Mkiaa0962
          Length = 88

 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 5/40 (12%)

Query: 3  WHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
          WHPD++ K+PG    A+ RF QI +AY +LS+E KR+ YD
Sbjct: 45 WHPDKN-KDPG----AEDRFIQISKAYEILSNEEKRTNYD 79


>pdb|2CTR|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily
          B Menber 9
          Length = 88

 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 30/42 (71%), Gaps = 5/42 (11%)

Query: 1  MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
          MK+HPD++ K+P    +A+ +F++I EAY  LSD N+R  YD
Sbjct: 33 MKYHPDKN-KSP----DAEAKFREIAEAYETLSDANRRKEYD 69


>pdb|1HDJ|A Chain A, Human Hsp40 (Hdj-1), Nmr
          Length = 77

 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 19/42 (45%), Positives = 30/42 (71%), Gaps = 5/42 (11%)

Query: 1  MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
          +++HPD++ K PG    A+ +F++I EAY VLSD  KR ++D
Sbjct: 29 LRYHPDKN-KEPG----AEEKFKEIAEAYDVLSDPRKREIFD 65


>pdb|2KQX|A Chain A, Nmr Structure Of The J-Domain (Residues 2-72) In The
          Escherichia Coli Cbpa
          Length = 73

 Score = 38.1 bits (87), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/41 (48%), Positives = 29/41 (70%), Gaps = 5/41 (12%)

Query: 2  KWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
          K+HPD S K P    +A+ RF+++ EA+ VLSDE +R+ YD
Sbjct: 32 KYHPDVS-KEP----DAEARFKEVAEAWEVLSDEQRRAEYD 67


>pdb|3APQ|A Chain A, Crystal Structure Of J-Trx1 Fragment Of Erdj5
 pdb|3APQ|B Chain B, Crystal Structure Of J-Trx1 Fragment Of Erdj5
          Length = 210

 Score = 37.7 bits (86), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 4/42 (9%)

Query: 1  MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
          +K HPD++  NP   G+    F +I  AY VL DE+ R  YD
Sbjct: 28 LKLHPDKNPNNPNAHGD----FLKINRAYEVLKDEDLRKKYD 65


>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5
          Length = 780

 Score = 37.0 bits (84), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 4/42 (9%)

Query: 1  MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
          +K HPD++  NP   G+    F +I  AY VL DE+ R  YD
Sbjct: 47 LKLHPDKNPNNPNAHGD----FLKINRAYEVLKDEDLRKKYD 84


>pdb|2YUA|A Chain A, Solution Structure Of The Dnaj Domain From Human
          Williams- Beuren Syndrome Chromosome Region 18 Protein
          Length = 99

 Score = 37.0 bits (84), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 28/56 (50%), Gaps = 9/56 (16%)

Query: 3  WHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPLEEEDEDFYG 58
          +HPDR   N G A EA  RF +I +AY VL     R  YD GL       DED  G
Sbjct: 45 YHPDR---NSGSA-EAAERFTRISQAYVVLGSATLRRKYDRGLL-----SDEDLRG 91


>pdb|3LZ8|A Chain A, Structure Of A Putative Chaperone Dnaj From Klebsiella
          Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A
          Resolution.
 pdb|3LZ8|B Chain B, Structure Of A Putative Chaperone Dnaj From Klebsiella
          Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A
          Resolution
          Length = 329

 Score = 36.2 bits (82), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 5/41 (12%)

Query: 2  KWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
          K+HPD S +N     +A+ +F+ + EA+ VL DE +R+ YD
Sbjct: 55 KYHPDVSKEN-----DAEAKFKDLAEAWEVLKDEQRRAEYD 90


>pdb|2QSA|A Chain A, Crystal Structure Of J-Domain Of Dnaj Homolog Dnj-2
          Precursor From C.Elegans
          Length = 109

 Score = 33.9 bits (76), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 5/60 (8%)

Query: 2  KWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPLEEEDEDFYGFVQ 61
          K HPDR  KN      A+ RF+ I  AY  L D+  ++ YD  L  P    D+ FY + Q
Sbjct: 43 KHHPDR-VKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDHP----DQRFYNYYQ 97


>pdb|2O37|A Chain A, J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From
          Saccharomyces Cerevisiae
          Length = 92

 Score = 33.5 bits (75), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 7/42 (16%)

Query: 1  MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
          +K+HPD+        G+ + +F++I EA+ +L+D  KR +YD
Sbjct: 34 LKYHPDKPT------GDTE-KFKEISEAFEILNDPQKREIYD 68


>pdb|2CTP|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily
          B Menber 12
          Length = 78

 Score = 33.1 bits (74), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 5/42 (11%)

Query: 1  MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
          +K+HPD++   PG A EA   F+ I  AY+VLS+  KR  YD
Sbjct: 33 LKFHPDKN-HAPG-ATEA---FKAIGTAYAVLSNPEKRKQYD 69


>pdb|2CTQ|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily
          C Menber 12
          Length = 112

 Score = 32.3 bits (72), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 4/39 (10%)

Query: 4  HPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
          HPD+  +NP    +A   FQ++Q+A  +L++E  R+ YD
Sbjct: 49 HPDKHPENP----KAVETFQKLQKAKEILTNEESRARYD 83


>pdb|3CFA|L Chain L, Anemonia Sulcata Red Fluorescent Protein Asrfp
 pdb|3CFA|M Chain M, Anemonia Sulcata Red Fluorescent Protein Asrfp
 pdb|3CFA|R Chain R, Anemonia Sulcata Red Fluorescent Protein Asrfp
 pdb|3CFA|S Chain S, Anemonia Sulcata Red Fluorescent Protein Asrfp
 pdb|3CFF|L Chain L, Photoswitchable Red Fluorescent Protein Psrfp, On-State
 pdb|3CFF|M Chain M, Photoswitchable Red Fluorescent Protein Psrfp, On-State
 pdb|3CFF|R Chain R, Photoswitchable Red Fluorescent Protein Psrfp, On-State
 pdb|3CFF|S Chain S, Photoswitchable Red Fluorescent Protein Psrfp, On-State
 pdb|3CFH|L Chain L, Photoswitchable Red Fluorescent Protein Psrfp, Off-State
 pdb|3CFH|M Chain M, Photoswitchable Red Fluorescent Protein Psrfp, Off-State
 pdb|3CFH|R Chain R, Photoswitchable Red Fluorescent Protein Psrfp, Off-State
 pdb|3CFH|S Chain S, Photoswitchable Red Fluorescent Protein Psrfp, Off-State
          Length = 62

 Score = 27.3 bits (59), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 71 KDEGDSFEDLQRMFVEMVDGMSFDFNYD 98
          K EG+ FE  Q M +E+++G    F +D
Sbjct: 29 KGEGNPFEGTQDMKIEVIEGGPLPFAFD 56


>pdb|1IUR|A Chain A, Dnaj Domain Of Human Kiaa0730 Protein
          Length = 88

 Score = 27.3 bits (59), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 3/35 (8%)

Query: 1  MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDE 35
          +KWHPD++ +N  +A E    F+ +Q   + L  +
Sbjct: 42 LKWHPDKNPENHDIANEV---FKHLQNEINRLEKQ 73


>pdb|1DGN|A Chain A, Solution Structure Of Iceberg, An Inhibitor Of
          Interleukin- 1beta Generation
          Length = 89

 Score = 26.9 bits (58), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 10/24 (41%), Positives = 16/24 (66%)

Query: 67 MNNVKDEGDSFEDLQRMFVEMVDG 90
          MN V+DE D+  D  R+ +++V G
Sbjct: 39 MNKVRDENDTVMDKARVLIDLVTG 62


>pdb|1C2P|A Chain A, Hepatitis C Virus Ns5b Rna-Dependent Rna Polymerase
 pdb|1C2P|B Chain B, Hepatitis C Virus Ns5b Rna-Dependent Rna Polymerase
          Length = 576

 Score = 26.6 bits (57), Expect = 3.9,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 3/53 (5%)

Query: 73  EGDSFEDLQRMFVEMVDGMSFDFNYDPTDAQRACVNTSKGKAAKRGTS---RC 122
           E  +  D+     ++V G S+ F Y P       VNT K K    G S   RC
Sbjct: 177 EKXALYDVVSTLPQVVXGSSYGFQYSPGQRVEFLVNTWKSKKNPXGFSYDTRC 229


>pdb|1GX5|A Chain A, Hepatitis C Virus Rna Polymerase In Complex With Gtp And
           Manganese
          Length = 536

 Score = 26.6 bits (57), Expect = 4.0,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 3/53 (5%)

Query: 73  EGDSFEDLQRMFVEMVDGMSFDFNYDPTDAQRACVNTSKGKAAKRGTS---RC 122
           E  +  D+     ++V G S+ F Y P       VNT K K    G S   RC
Sbjct: 171 EKXALYDVVSTLPQVVXGSSYGFQYSPGQRVEFLVNTWKSKKNPXGFSYDTRC 223


>pdb|1GX6|A Chain A, Hepatitis C Virus Rna Polymerase In Complex With Utp And
           Manganese
          Length = 531

 Score = 26.6 bits (57), Expect = 4.1,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 3/53 (5%)

Query: 73  EGDSFEDLQRMFVEMVDGMSFDFNYDPTDAQRACVNTSKGKAAKRGTS---RC 122
           E  +  D+     ++V G S+ F Y P       VNT K K    G S   RC
Sbjct: 171 EKXALYDVVSTLPQVVXGSSYGFQYSPGQRVEFLVNTWKSKKNPXGFSYDTRC 223


>pdb|1CSJ|A Chain A, Crystal Structure Of The Rna-dependent Rna Polymerase Of
           Hepatitis C Virus
 pdb|1CSJ|B Chain B, Crystal Structure Of The Rna-dependent Rna Polymerase Of
           Hepatitis C Virus
          Length = 531

 Score = 26.6 bits (57), Expect = 4.1,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 3/53 (5%)

Query: 73  EGDSFEDLQRMFVEMVDGMSFDFNYDPTDAQRACVNTSKGKAAKRGTS---RC 122
           E  +  D+     ++V G S+ F Y P       VNT K K    G S   RC
Sbjct: 171 EKXALYDVVSTLPQVVXGSSYGFQYSPGQRVEFLVNTWKSKKNPXGFSYDTRC 223


>pdb|1XHC|A Chain A, Nadh Oxidase /nitrite Reductase From Pyrococcus Furiosus
           Pfu-1140779- 001
          Length = 367

 Score = 25.8 bits (55), Expect = 6.8,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 9/73 (12%)

Query: 14  VAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPLEEEDEDFYGFVQEMVSMMNNVKDE 73
           +AG AK   +Q +    +L  E +R  +         +     + F +  ++++ N K E
Sbjct: 276 IAGTAKAAMEQARVLADILKGEPRRYNF---------KFRSTVFKFGKLQIAIIGNTKGE 326

Query: 74  GDSFEDLQRMFVE 86
           G   ED  ++F E
Sbjct: 327 GKWIEDNTKVFYE 339


>pdb|1YVF|A Chain A, Hepatitis C Virus Ns5b Rna-Dependent Rna Polymerase
           Complex With Inhibitor Pha-00729145
 pdb|1Z4U|A Chain A, Hepatitis C Virus Ns5b Rna-Dependent Rna Polymerase
           Complex With Inhibitor Pha-00799585
          Length = 577

 Score = 25.0 bits (53), Expect = 9.6,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 3/47 (6%)

Query: 79  DLQRMFVEMVDGMSFDFNYDPTDAQRACVNTSKGKAAKRGTS---RC 122
           D+     + V G S+ F Y P       VNT K K    G S   RC
Sbjct: 178 DVVSTLPQAVMGSSYGFQYSPKQRVEFLVNTWKAKKCPMGFSYDTRC 224


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.315    0.131    0.388 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,843,010
Number of Sequences: 62578
Number of extensions: 144809
Number of successful extensions: 421
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 377
Number of HSP's gapped (non-prelim): 43
length of query: 122
length of database: 14,973,337
effective HSP length: 84
effective length of query: 38
effective length of database: 9,716,785
effective search space: 369237830
effective search space used: 369237830
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 45 (21.9 bits)