BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033295
(122 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B9KAB9|DNAJ_THENN Chaperone protein DnaJ OS=Thermotoga neapolitana (strain ATCC 49049
/ DSM 4359 / NS-E) GN=dnaJ PE=3 SV=1
Length = 370
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/93 (37%), Positives = 48/93 (51%), Gaps = 17/93 (18%)
Query: 2 KWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPLEEEDEDFYGFVQ 61
+WHPDR +N EA+ RF++IQEAY VLSD KR+MYD +G+V
Sbjct: 33 EWHPDRHPEN---RKEAEQRFKEIQEAYEVLSDPQKRAMYDR-------------FGYVG 76
Query: 62 EMVSMMNNVKDEGDSFEDLQRMFVEMVDGMSFD 94
E + + G FED+ R F + + FD
Sbjct: 77 EQ-PVYQEAETGGSFFEDVFREFENIFNRDIFD 108
>sp|A5IIT4|DNAJ_THEP1 Chaperone protein DnaJ OS=Thermotoga petrophila (strain RKU-1 /
ATCC BAA-488 / DSM 13995) GN=dnaJ PE=3 SV=1
Length = 369
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 56/117 (47%), Gaps = 23/117 (19%)
Query: 2 KWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPLEEEDEDFYGFVQ 61
+WHPDR +N EA+ RF++IQEAY VLSD KR+MYD +G+V
Sbjct: 33 EWHPDRHPEN---RKEAEQRFKEIQEAYEVLSDPQKRAMYDR-------------FGYVG 76
Query: 62 EMVSMMNNVKDEGDSFEDLQRMFVEMVDGMSFDFNYDPTDAQRACVNTSKGKAAKRG 118
E + + G FED+ + F + + FD + Q K + A+RG
Sbjct: 77 EQPTYQET--ESGGFFEDIFKEFENIFNRDIFDVFFGERPGQE-----EKREYARRG 126
>sp|B1LCI2|DNAJ_THESQ Chaperone protein DnaJ OS=Thermotoga sp. (strain RQ2) GN=dnaJ PE=3
SV=1
Length = 369
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 52/105 (49%), Gaps = 20/105 (19%)
Query: 2 KWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPLEEEDEDFYGFVQ 61
+WHPDR +N EA+ RF++IQEAY VLSD KR+MYD +G+V
Sbjct: 33 EWHPDRHPEN---RKEAEQRFKEIQEAYEVLSDPQKRAMYDR-------------FGYVG 76
Query: 62 EMVSMMNNVKDEGDSFEDLQRMFVEMVDGMSFD--FNYDPTDAQR 104
E + + G F+D+ R F + + FD F P +R
Sbjct: 77 EQPTYQET--ESGGFFDDIFREFENIFNRDIFDVFFGERPHQEER 119
>sp|Q9WZV3|DNAJ_THEMA Chaperone protein DnaJ OS=Thermotoga maritima (strain ATCC 43589 /
MSB8 / DSM 3109 / JCM 10099) GN=dnaJ PE=3 SV=1
Length = 369
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 52/105 (49%), Gaps = 20/105 (19%)
Query: 2 KWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPLEEEDEDFYGFVQ 61
+WHPDR +N EA+ RF++IQEAY VLSD KR+MYD +G+V
Sbjct: 33 EWHPDRHPEN---RKEAEQRFKEIQEAYEVLSDPQKRAMYDR-------------FGYVG 76
Query: 62 EMVSMMNNVKDEGDSFEDLQRMFVEMVDGMSFD--FNYDPTDAQR 104
E + + G F+D+ R F + + FD F P +R
Sbjct: 77 EQPTYQET--ESGGFFDDIFRDFENIFNRDIFDVFFGERPHQEER 119
>sp|A6LJ63|DNAJ_THEM4 Chaperone protein DnaJ OS=Thermosipho melanesiensis (strain BI429
/ DSM 12029) GN=dnaJ PE=3 SV=1
Length = 373
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 2 KWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
KWHPDR+ +N +A E +F++IQEAY VLSD KR+MYD
Sbjct: 31 KWHPDRNYENKKLAEE---KFKEIQEAYEVLSDPEKRAMYD 68
>sp|A6Q486|DNAJ_NITSB Chaperone protein DnaJ OS=Nitratiruptor sp. (strain SB155-2)
GN=dnaJ PE=3 SV=1
Length = 373
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 6/62 (9%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPLEEEDEDFYGFV 60
+K+HPDR+ NP EA+ +F+ I EAY VLSDE KR++YD Y E++ F GF
Sbjct: 30 LKYHPDRNPDNP----EAEEKFKLINEAYQVLSDEEKRALYDQ--YGKAGLENQGFSGFN 83
Query: 61 QE 62
Q+
Sbjct: 84 QK 85
>sp|Q5SLW9|DNAJ1_THET8 Chaperone protein DnaJ 1 OS=Thermus thermophilus (strain HB8 / ATCC
27634 / DSM 579) GN=dnaJ1 PE=3 SV=1
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPLEEEDEDFYG-F 59
+K+HPDR NPG EA+ RF++I EAY+VLSD KR+ YD G + E ED + F
Sbjct: 28 LKYHPDR---NPGDK-EAEERFKEINEAYAVLSDPKKRAAYDRGHLEAPEYRPEDLFDLF 83
Query: 60 VQEMVSMMNNVK-DEGDSFE-DLQRMFVEMVDGMSFDFNYDPTDAQRAC 106
QE+ + + + G+ E +++ +++ G + Y AC
Sbjct: 84 FQEVFGVRGHRRPPRGEDLEAEVEVELQDLLHGAEKEVRYTRLVPCEAC 132
>sp|Q72GN6|DNAJ_THET2 Chaperone protein DnaJ OS=Thermus thermophilus (strain HB27 / ATCC
BAA-163 / DSM 7039) GN=dnaJ PE=3 SV=1
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPLEEEDEDFYG-F 59
+K+HPDR NPG EA+ RF++I EAY+VLSD KR+ YD G + E ED + F
Sbjct: 28 LKYHPDR---NPGDK-EAEERFKEINEAYAVLSDPKKRAAYDRGHLEAPEYRPEDLFDLF 83
Query: 60 VQEMVSMMNNVK-DEGDSFE-DLQRMFVEMVDGMSFDFNYDPTDAQRAC 106
QE+ + + + G+ E +++ +++ G + Y AC
Sbjct: 84 FQEVFGVRGHRRPPRGEDLEAEVEVELQDLLHGAEKEVRYTRLVPCEAC 132
>sp|Q607A6|DNAJ_METCA Chaperone protein DnaJ OS=Methylococcus capsulatus (strain ATCC
33009 / NCIMB 11132 / Bath) GN=dnaJ PE=3 SV=1
Length = 377
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/42 (57%), Positives = 30/42 (71%), Gaps = 4/42 (9%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
MK+HPDR+ NP EA+ RF+ ++EAY VLSD KRS YD
Sbjct: 30 MKYHPDRNKDNP----EAEERFKSVKEAYDVLSDPKKRSAYD 67
>sp|B7IFE0|DNAJ_THEAB Chaperone protein DnaJ OS=Thermosipho africanus (strain TCF52B)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 2 KWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
KWHPDR+ +N EA+ +F++IQEAY VLSD KR+MYD
Sbjct: 31 KWHPDRNHQN---RKEAEEKFKEIQEAYEVLSDPEKRAMYD 68
>sp|Q862Z4|DNJB3_MACFU DnaJ homolog subfamily B member 3 OS=Macaca fuscata fuscata
GN=DNAJB3 PE=2 SV=1
Length = 242
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
+KWHPD KNP EA+ RF+Q+ EAY VLSD KR +YD
Sbjct: 28 LKWHPD---KNPDNKEEAERRFKQVAEAYEVLSDAKKRDVYD 66
>sp|A7IC67|DNAJ_XANP2 Chaperone protein DnaJ OS=Xanthobacter autotrophicus (strain ATCC
BAA-1158 / Py2) GN=dnaJ PE=3 SV=1
Length = 379
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
MKWHPDRS N GEA+ F+++ EAY VL D KR+ YD
Sbjct: 30 MKWHPDRSQGN----GEAEVMFKEVNEAYEVLKDPQKRAAYD 67
>sp|Q6P642|DNJB6_XENTR DnaJ homolog subfamily B member 6 OS=Xenopus tropicalis GN=dnajb6
PE=2 SV=1
Length = 242
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
+KWHPD KNP EA+ RF+++ EAY VLSD KR +YD
Sbjct: 28 LKWHPD---KNPDNKDEAERRFKEVAEAYEVLSDSKKRDIYD 66
>sp|Q9QYI7|DNJB8_MOUSE DnaJ homolog subfamily B member 8 OS=Mus musculus GN=Dnajb8 PE=2
SV=1
Length = 227
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
++WHPD KNP EA+ +F+Q+ EAY VLSD KRS+YD
Sbjct: 28 LRWHPD---KNPDNKEEAEKKFKQVSEAYEVLSDSKKRSVYD 66
>sp|A8IPT0|DNAJ_AZOC5 Chaperone protein DnaJ OS=Azorhizobium caulinodans (strain ATCC
43989 / DSM 5975 / ORS 571) GN=dnaJ PE=3 SV=1
Length = 381
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
MKWHPD++ +P EA+ RF++I EAY VL D KR YD
Sbjct: 30 MKWHPDKNPGDP----EAEIRFKEISEAYEVLKDPQKRGAYD 67
>sp|Q5FWN8|DNJ6A_XENLA DnaJ homolog subfamily B member 6-A OS=Xenopus laevis GN=dnajb6-a
PE=2 SV=1
Length = 250
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
+KWHPD KNP EA+ RF+++ EAY VLSD KR +YD
Sbjct: 28 LKWHPD---KNPDNKDEAERRFKEVAEAYEVLSDSKKRDIYD 66
>sp|Q5XGU5|DNJ6B_XENLA DnaJ homolog subfamily B member 6-B OS=Xenopus laevis GN=dnajb6-b
PE=2 SV=1
Length = 245
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
+KWHPD KNP EA+ RF+++ EAY VLSD KR +YD
Sbjct: 28 LKWHPD---KNPDNKEEAERRFKEVAEAYEVLSDSKKRDIYD 66
>sp|Q8WWF6|DNJB3_HUMAN DnaJ homolog subfamily B member 3 OS=Homo sapiens GN=DNAJB3 PE=1
SV=1
Length = 145
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
+KWHPD KNP EA+ RF+Q+ EAY VLSD KR +YD
Sbjct: 28 LKWHPD---KNPENKEEAERRFKQVAEAYEVLSDAKKRDIYD 66
>sp|Q0AKB3|DNAJ_MARMM Chaperone protein DnaJ OS=Maricaulis maris (strain MCS10) GN=dnaJ
PE=3 SV=1
Length = 395
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 4/42 (9%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
MK+HPDR NPG A EA+ +F+ + EAYSVLSD NKR+ YD
Sbjct: 30 MKYHPDR---NPGDA-EAEAQFKVVGEAYSVLSDPNKRAAYD 67
>sp|Q4R7Y5|DNJB6_MACFA DnaJ homolog subfamily B member 6 OS=Macaca fascicularis
GN=DNAJB6 PE=2 SV=1
Length = 241
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
+KWHPD KNP EA+ +F+Q+ EAY VLSD KR +YD
Sbjct: 28 LKWHPD---KNPENKEEAERKFKQVAEAYEVLSDAKKRDIYD 66
>sp|Q0AIY0|DNAJ_NITEC Chaperone protein DnaJ OS=Nitrosomonas eutropha (strain C91)
GN=dnaJ PE=3 SV=1
Length = 369
Score = 48.9 bits (115), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/42 (54%), Positives = 32/42 (76%), Gaps = 4/42 (9%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
MK+HPDR+A + +A+ RF++I+EAY VLSD NKR+ YD
Sbjct: 30 MKYHPDRNAGD----AKAEERFKEIKEAYEVLSDSNKRAAYD 67
>sp|Q0III6|DNJB6_BOVIN DnaJ homolog subfamily B member 6 OS=Bos taurus GN=DNAJB6 PE=2
SV=1
Length = 242
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
+KWHPD KNP EA+ +F+Q+ EAY VLSD KR +YD
Sbjct: 28 LKWHPD---KNPENKEEAERKFKQVAEAYEVLSDAKKRDIYD 66
>sp|Q6AYU3|DNJB6_RAT DnaJ homolog subfamily B member 6 OS=Rattus norvegicus GN=Dnajb6
PE=1 SV=1
Length = 357
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
+KWHPD KNP EA+ +F+Q+ EAY VLSD KR +YD
Sbjct: 28 LKWHPD---KNPENKEEAERKFKQVAEAYEVLSDAKKRDIYD 66
>sp|Q21CI1|DNAJ_RHOPB Chaperone protein DnaJ OS=Rhodopseudomonas palustris (strain
BisB18) GN=dnaJ PE=3 SV=1
Length = 379
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 30/42 (71%), Gaps = 4/42 (9%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
MKWHPDR NPG A ++ RF++I EAY VL D +KR+ YD
Sbjct: 32 MKWHPDR---NPGDA-SSESRFKEINEAYEVLKDGDKRAAYD 69
>sp|O75190|DNJB6_HUMAN DnaJ homolog subfamily B member 6 OS=Homo sapiens GN=DNAJB6 PE=1
SV=2
Length = 326
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
+KWHPD KNP EA+ +F+Q+ EAY VLSD KR +YD
Sbjct: 28 LKWHPD---KNPENKEEAERKFKQVAEAYEVLSDAKKRDIYD 66
>sp|Q5R8H0|DNJB6_PONAB DnaJ homolog subfamily B member 6 OS=Pongo abelii GN=DNAJB6 PE=2
SV=1
Length = 326
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
+KWHPD KNP EA+ +F+Q+ EAY VLSD KR +YD
Sbjct: 28 LKWHPD---KNPENKEEAERKFKQVAEAYEVLSDAKKRDIYD 66
>sp|O54946|DNJB6_MOUSE DnaJ homolog subfamily B member 6 OS=Mus musculus GN=Dnajb6 PE=1
SV=4
Length = 365
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
+KWHPD KNP EA+ +F+Q+ EAY VLSD KR +YD
Sbjct: 28 LKWHPD---KNPENKEEAERKFKQVAEAYEVLSDAKKRDIYD 66
>sp|O35723|DNJB3_MOUSE DnaJ homolog subfamily B member 3 OS=Mus musculus GN=Dnajb3 PE=2
SV=1
Length = 242
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
+KWHPD KNP EA+ RF+Q+ +AY VLSD KR +YD
Sbjct: 28 LKWHPD---KNPEHKEEAERRFKQVAQAYEVLSDVRKREVYD 66
>sp|B2IBR5|DNAJ_BEII9 Chaperone protein DnaJ OS=Beijerinckia indica subsp. indica
(strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=dnaJ PE=3
SV=1
Length = 372
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPLEEEDEDFYGFV 60
M+WHPDR NPG EA+ +F++I EAY LSD KR+ YD + E GF
Sbjct: 30 MQWHPDR---NPGNE-EAEIQFKEINEAYQTLSDGQKRAAYDRYGHAAFEHGGGGNDGFA 85
Query: 61 QEMVSMMNNV 70
M + +++
Sbjct: 86 SSMADIFDDL 95
>sp|Q5F3Z5|DNJB6_CHICK DnaJ homolog subfamily B member 6 OS=Gallus gallus GN=DNAJB6 PE=2
SV=1
Length = 326
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
+KWHPD KNP EA+ +F+Q+ EAY VLSD KR +YD
Sbjct: 28 LKWHPD---KNPENKEEAEQQFKQVAEAYEVLSDAKKRDIYD 66
>sp|P48207|DNAJ_FRATU Chaperone protein DnaJ OS=Francisella tularensis GN=dnaJ PE=3
SV=1
Length = 371
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 32/42 (76%), Gaps = 4/42 (9%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
MK+HPDR NPG EA+ +F++I EAY +LSD++KRS YD
Sbjct: 30 MKYHPDR---NPGDK-EAEIKFKEISEAYEILSDDSKRSRYD 67
>sp|Q2A327|DNAJ_FRATH Chaperone protein DnaJ OS=Francisella tularensis subsp.
holarctica (strain LVS) GN=dnaJ PE=3 SV=1
Length = 371
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 32/42 (76%), Gaps = 4/42 (9%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
MK+HPDR NPG EA+ +F++I EAY +LSD++KRS YD
Sbjct: 30 MKYHPDR---NPGDK-EAEIKFKEISEAYEILSDDSKRSRYD 67
>sp|Q8NHS0|DNJB8_HUMAN DnaJ homolog subfamily B member 8 OS=Homo sapiens GN=DNAJB8 PE=1
SV=1
Length = 232
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
++WHPD KNP EA+ +F+ + EAY VLSD KRS+YD
Sbjct: 28 LRWHPD---KNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYD 66
>sp|Q9UXR9|DNAJ_METTE Chaperone protein DnaJ OS=Methanosarcina thermophila GN=dnaJ PE=3
SV=1
Length = 387
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 66/139 (47%), Gaps = 26/139 (18%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD----AGLYDPLEEED--- 53
+K+HPDR+ K PG A+ +F++I EAY+VLSD KR+ YD AG+ ED
Sbjct: 31 LKYHPDRN-KEPG----AEEKFKEISEAYAVLSDPEKRAQYDRFGHAGINGQYTAEDIFR 85
Query: 54 -EDFYGF--VQEMV-----SMMNNVKDEGDSFEDLQRMFVEMVDGMSFDFNYDPTDAQRA 105
DF GF + EM + D DL F E G+ D + T+
Sbjct: 86 GADFSGFGDIFEMFFGGSRRGPRGPRRGSDLQYDLYITFEEAAFGVRKDIDVPRTE---R 142
Query: 106 CVNTSKGKAAKRGTS--RC 122
C N S G A+ GTS RC
Sbjct: 143 CSNCS-GTGARPGTSPKRC 160
>sp|A9HEA1|DNAJ_GLUDA Chaperone protein DnaJ OS=Gluconacetobacter diazotrophicus
(strain ATCC 49037 / DSM 5601 / PAl5) GN=dnaJ PE=3 SV=1
Length = 374
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/42 (54%), Positives = 30/42 (71%), Gaps = 4/42 (9%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
M++HPDR NPG A A+ RF++I EAY +L DE KR+ YD
Sbjct: 31 MQYHPDR---NPGDA-SAEARFKEINEAYDILKDEQKRAAYD 68
>sp|Q2J319|DNAJ_RHOP2 Chaperone protein DnaJ OS=Rhodopseudomonas palustris (strain
HaA2) GN=dnaJ PE=3 SV=1
Length = 379
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 30/42 (71%), Gaps = 4/42 (9%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
MKWHPDR NPG A ++ +F++I EAY VL D +KR+ YD
Sbjct: 32 MKWHPDR---NPGDA-SSEIKFKEINEAYEVLKDGDKRAAYD 69
>sp|Q182E7|DNAJ_CLOD6 Chaperone protein DnaJ OS=Clostridium difficile (strain 630)
GN=dnaJ PE=3 SV=1
Length = 384
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 33/49 (67%), Gaps = 4/49 (8%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPL 49
MK+HPDR NPG EA+ +F++I EAY VLSD+ KR YD +D L
Sbjct: 31 MKYHPDR---NPGDK-EAEEKFKEINEAYEVLSDDTKRKTYDQFGHDGL 75
>sp|B4SSQ7|DNAJ_STRM5 Chaperone protein DnaJ OS=Stenotrophomonas maltophilia (strain
R551-3) GN=dnaJ PE=3 SV=1
Length = 376
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 31/43 (72%), Gaps = 4/43 (9%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDA 43
MK+HPDR NPG A A+ F++ +EAY VLSD NKR MYD+
Sbjct: 30 MKFHPDR---NPGDAA-AEASFKECKEAYEVLSDGNKRRMYDS 68
>sp|B2FMY6|DNAJ_STRMK Chaperone protein DnaJ OS=Stenotrophomonas maltophilia (strain
K279a) GN=dnaJ PE=3 SV=1
Length = 374
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 31/43 (72%), Gaps = 4/43 (9%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDA 43
MK+HPDR NPG A A+ F++ +EAY VLSD NKR MYD+
Sbjct: 30 MKFHPDR---NPGDAA-AEASFKECKEAYEVLSDGNKRRMYDS 68
>sp|A1KR91|DNAJ_NEIMF Chaperone protein DnaJ OS=Neisseria meningitidis serogroup C /
serotype 2a (strain ATCC 700532 / FAM18) GN=dnaJ PE=3
SV=1
Length = 373
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 31/42 (73%), Gaps = 4/42 (9%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
MK+HPDR+ N EA+ +F+++Q+AY LSD+ KR+MYD
Sbjct: 30 MKYHPDRNPDNK----EAEEKFKEVQKAYETLSDKEKRAMYD 67
>sp|P63969|DNAJ_NEIMB Chaperone protein DnaJ OS=Neisseria meningitidis serogroup B
(strain MC58) GN=dnaJ PE=3 SV=1
Length = 373
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 31/42 (73%), Gaps = 4/42 (9%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
MK+HPDR+ N EA+ +F+++Q+AY LSD+ KR+MYD
Sbjct: 30 MKYHPDRNPDNK----EAEEKFKEVQKAYETLSDKEKRAMYD 67
>sp|P63968|DNAJ_NEIMA Chaperone protein DnaJ OS=Neisseria meningitidis serogroup A /
serotype 4A (strain Z2491) GN=dnaJ PE=3 SV=1
Length = 373
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 31/42 (73%), Gaps = 4/42 (9%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
MK+HPDR+ N EA+ +F+++Q+AY LSD+ KR+MYD
Sbjct: 30 MKYHPDRNPDNK----EAEEKFKEVQKAYETLSDKEKRAMYD 67
>sp|A9LZV9|DNAJ_NEIM0 Chaperone protein DnaJ OS=Neisseria meningitidis serogroup C
(strain 053442) GN=dnaJ PE=3 SV=1
Length = 373
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 31/42 (73%), Gaps = 4/42 (9%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
MK+HPDR+ N EA+ +F+++Q+AY LSD+ KR+MYD
Sbjct: 30 MKYHPDRNPDNK----EAEEKFKEVQKAYETLSDKEKRAMYD 67
>sp|Q8PAK8|DNAJ_XANCP Chaperone protein DnaJ OS=Xanthomonas campestris pv. campestris
(strain ATCC 33913 / NCPPB 528 / LMG 568) GN=dnaJ PE=3
SV=1
Length = 376
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/43 (58%), Positives = 30/43 (69%), Gaps = 4/43 (9%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDA 43
MK+HPDR NPG A A+ F++ +EAY VLSD NKR YDA
Sbjct: 30 MKYHPDR---NPGDAA-AEATFKECKEAYEVLSDGNKRRAYDA 68
>sp|Q4UT12|DNAJ_XANC8 Chaperone protein DnaJ OS=Xanthomonas campestris pv. campestris
(strain 8004) GN=dnaJ PE=3 SV=1
Length = 376
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/43 (58%), Positives = 30/43 (69%), Gaps = 4/43 (9%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDA 43
MK+HPDR NPG A A+ F++ +EAY VLSD NKR YDA
Sbjct: 30 MKYHPDR---NPGDAA-AEATFKECKEAYEVLSDGNKRRAYDA 68
>sp|B0RVU1|DNAJ_XANCB Chaperone protein DnaJ OS=Xanthomonas campestris pv. campestris
(strain B100) GN=dnaJ PE=3 SV=1
Length = 376
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/43 (58%), Positives = 30/43 (69%), Gaps = 4/43 (9%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDA 43
MK+HPDR NPG A A+ F++ +EAY VLSD NKR YDA
Sbjct: 30 MKYHPDR---NPGDAA-AEATFKECKEAYEVLSDGNKRRAYDA 68
>sp|O08356|DNAJ_RHOS7 Chaperone protein DnaJ OS=Rhodopseudomonas sp. (strain No.7)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%), Gaps = 4/42 (9%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
MKWHPDR+ +P + + +F++I EAY VL D +KR+ YD
Sbjct: 32 MKWHPDRNPGDP----QCEIKFKEINEAYEVLKDGDKRAAYD 69
>sp|B3Q973|DNAJ_RHOPT Chaperone protein DnaJ OS=Rhodopseudomonas palustris (strain
TIE-1) GN=dnaJ PE=3 SV=1
Length = 379
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%), Gaps = 4/42 (9%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
MKWHPDR+ +P + + +F++I EAY VL D +KR+ YD
Sbjct: 32 MKWHPDRNPGDP----QCEIKFKEINEAYEVLKDGDKRAAYD 69
>sp|Q6NCY3|DNAJ_RHOPA Chaperone protein DnaJ OS=Rhodopseudomonas palustris (strain ATCC
BAA-98 / CGA009) GN=dnaJ PE=3 SV=1
Length = 379
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%), Gaps = 4/42 (9%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
MKWHPDR+ +P + + +F++I EAY VL D +KR+ YD
Sbjct: 32 MKWHPDRNPGDP----QCEIKFKEINEAYEVLKDGDKRAAYD 69
>sp|O06431|DNAJ_NITEU Chaperone protein DnaJ OS=Nitrosomonas europaea (strain ATCC
19718 / NBRC 14298) GN=dnaJ PE=3 SV=2
Length = 369
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 31/42 (73%), Gaps = 4/42 (9%)
Query: 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 42
MK+HPDR+A + +A+ RF+ I+EAY +LSD NKR+ YD
Sbjct: 30 MKYHPDRNAGDT----KAEERFKNIKEAYEILSDPNKRAAYD 67
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,495,117
Number of Sequences: 539616
Number of extensions: 1837737
Number of successful extensions: 6381
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 157
Number of HSP's that attempted gapping in prelim test: 5459
Number of HSP's gapped (non-prelim): 934
length of query: 122
length of database: 191,569,459
effective HSP length: 89
effective length of query: 33
effective length of database: 143,543,635
effective search space: 4736939955
effective search space used: 4736939955
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)