Query 033295
Match_columns 122
No_of_seqs 126 out of 1864
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 20:16:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033295.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033295hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lz8_A Putative chaperone DNAJ 99.8 2.1E-21 7.1E-26 149.0 -0.3 96 1-101 54-168 (329)
2 1bq0_A DNAJ, HSP40; chaperone, 99.6 3.4E-16 1.2E-20 101.6 2.6 45 1-49 29-73 (103)
3 2dn9_A DNAJ homolog subfamily 99.5 3.9E-15 1.3E-19 92.1 1.9 44 1-48 33-76 (79)
4 2ej7_A HCG3 gene; HCG3 protein 99.5 1.1E-14 3.7E-19 90.7 3.9 46 1-49 35-80 (82)
5 2ctq_A DNAJ homolog subfamily 99.5 5.4E-15 1.8E-19 97.3 0.7 46 1-50 46-91 (112)
6 1hdj_A Human HSP40, HDJ-1; mol 99.5 9.7E-15 3.3E-19 89.9 1.8 44 1-49 29-72 (77)
7 2ctp_A DNAJ homolog subfamily 99.5 1.8E-14 6.3E-19 88.9 2.7 43 1-48 33-75 (78)
8 2yua_A Williams-beuren syndrom 99.5 1.5E-14 5.3E-19 93.2 2.2 42 1-46 43-84 (99)
9 3apq_A DNAJ homolog subfamily 99.4 8.9E-15 3.1E-19 104.3 0.4 44 1-48 28-71 (210)
10 1wjz_A 1700030A21RIK protein; 99.4 4.6E-14 1.6E-18 89.8 3.1 47 1-47 42-90 (94)
11 2cug_A Mkiaa0962 protein; DNAJ 99.4 2.2E-14 7.6E-19 90.5 1.1 43 1-48 43-85 (88)
12 2dmx_A DNAJ homolog subfamily 99.4 4E-14 1.4E-18 90.0 1.7 46 1-49 35-80 (92)
13 2ctw_A DNAJ homolog subfamily 99.4 3.8E-14 1.3E-18 92.9 1.2 43 1-47 43-85 (109)
14 2qsa_A DNAJ homolog DNJ-2; J-d 99.4 1.2E-14 4E-19 95.2 -1.6 47 1-48 42-88 (109)
15 2ctr_A DNAJ homolog subfamily 99.4 6.9E-14 2.3E-18 88.3 0.9 41 1-46 33-73 (88)
16 2och_A Hypothetical protein DN 99.4 6E-14 2.1E-18 85.6 0.2 39 1-46 34-72 (73)
17 2lgw_A DNAJ homolog subfamily 99.4 5.7E-14 2E-18 90.6 -0.0 44 1-47 28-71 (99)
18 2l6l_A DNAJ homolog subfamily 99.3 5.2E-13 1.8E-17 92.2 1.2 45 1-45 36-82 (155)
19 1fpo_A HSC20, chaperone protei 99.2 5.3E-13 1.8E-17 93.8 -0.3 44 1-44 29-73 (171)
20 2o37_A Protein SIS1; HSP40, J- 99.2 5.1E-13 1.8E-17 84.9 -0.8 39 1-46 34-72 (92)
21 3bvo_A CO-chaperone protein HS 99.2 6.9E-13 2.4E-17 95.8 -0.5 43 1-43 71-114 (207)
22 3apo_A DNAJ homolog subfamily 99.2 1E-12 3.6E-17 109.0 -0.8 46 1-50 47-92 (780)
23 3hho_A CO-chaperone protein HS 99.2 1.3E-12 4.4E-17 92.0 -0.2 44 1-44 32-76 (174)
24 1gh6_A Large T antigen; tumor 99.2 4.2E-12 1.4E-16 83.9 1.4 37 1-45 36-72 (114)
25 2pf4_E Small T antigen; PP2A, 99.2 2.7E-12 9.3E-17 90.4 -0.2 38 1-46 39-76 (174)
26 2ys8_A RAB-related GTP-binding 99.1 8.2E-12 2.8E-16 79.1 1.2 35 1-40 53-87 (90)
27 1iur_A KIAA0730 protein; DNAJ 99.1 4E-11 1.4E-15 75.7 2.4 38 1-41 42-79 (88)
28 3ag7_A Putative uncharacterize 99.0 8.1E-12 2.8E-16 81.5 -3.4 37 1-37 66-105 (106)
29 3uo3_A J-type CO-chaperone JAC 99.0 1.4E-11 4.7E-16 87.3 -3.1 38 1-45 44-81 (181)
30 1faf_A Large T antigen; J doma 98.9 1.7E-10 5.7E-15 71.4 0.6 36 1-44 39-74 (79)
31 2y4t_A DNAJ homolog subfamily 98.8 3.8E-10 1.3E-14 85.6 0.4 43 1-44 408-450 (450)
32 2qwo_B Putative tyrosine-prote 98.8 3.2E-10 1.1E-14 72.1 -0.4 33 1-34 59-91 (92)
33 2guz_A Mitochondrial import in 98.7 2E-09 6.8E-14 65.1 -0.4 31 1-39 41-71 (71)
34 2ctt_A DNAJ homolog subfamily 98.5 5.6E-09 1.9E-13 67.5 -1.9 42 74-119 2-43 (104)
35 1nlt_A Protein YDJ1, mitochond 98.4 3.7E-08 1.2E-12 72.7 0.0 46 70-119 8-53 (248)
36 1n4c_A Auxilin; four helix bun 97.9 3.8E-06 1.3E-10 59.3 1.7 24 18-41 159-182 (182)
37 3agx_A DNAJ homolog subfamily 97.5 1.7E-05 5.8E-10 55.7 0.1 37 74-116 3-39 (181)
38 2q2g_A HSP40 protein, heat sho 95.8 0.0011 3.9E-08 46.2 -0.8 29 73-101 3-31 (180)
39 3pmq_A Decaheme cytochrome C M 94.2 0.0012 4.3E-08 54.6 -4.9 39 77-119 168-206 (669)
40 1c3g_A Heat shock protein 40; 94.0 0.0096 3.3E-07 41.1 0.0 25 75-99 2-26 (170)
41 1exk_A DNAJ protein; extended 93.3 0.016 5.4E-07 34.7 0.1 25 90-118 1-25 (79)
42 2guz_B Mitochondrial import in 87.3 0.17 6E-06 29.4 0.8 25 2-34 34-58 (65)
43 2bx9_A Anti-trap, AT, tryptoph 79.6 0.38 1.3E-05 26.9 0.0 13 106-118 11-23 (53)
44 3lcz_A YCZA, inhibitor of trap 79.5 0.36 1.2E-05 26.9 -0.1 14 105-118 10-23 (53)
45 3i38_A Putative chaperone DNAJ 70.9 0.73 2.5E-05 29.2 -0.3 26 72-97 10-35 (109)
46 1xao_A YDJ1, mitochondrial pro 62.8 1.5 5E-05 28.3 -0.1 25 72-96 5-29 (121)
47 1c3g_A Heat shock protein 40; 46.1 4.4 0.00015 27.4 0.1 25 72-96 85-109 (170)
48 1ag7_A Conotoxin GS; neurotoxi 44.5 9.9 0.00034 18.5 1.2 13 110-122 2-14 (34)
49 1cf7_A Protein (transcription 43.9 6.4 0.00022 23.3 0.6 19 25-43 33-51 (76)
50 3agx_A DNAJ homolog subfamily 43.4 4.7 0.00016 27.6 -0.1 25 72-96 91-115 (181)
51 2q2g_A HSP40 protein, heat sho 41.8 5.2 0.00018 27.3 -0.1 26 72-97 91-116 (180)
52 1eyo_A Conotoxin TVIIA; cystin 41.0 14 0.00048 17.5 1.4 14 109-122 1-14 (30)
53 1nlt_A Protein YDJ1, mitochond 39.0 6 0.00021 28.4 -0.1 26 72-97 160-185 (248)
54 2bx2_L Ribonuclease E, RNAse E 32.8 20 0.00068 28.8 1.9 14 105-118 409-422 (517)
55 3u7d_B Protein HEG homolog 1; 28.0 15 0.00051 16.9 0.3 11 31-41 15-25 (26)
56 1i11_A Transcription factor SO 25.1 42 0.0014 19.2 2.0 25 18-42 32-56 (81)
57 3lz8_A Putative chaperone DNAJ 24.4 14 0.00047 27.8 -0.3 24 73-96 231-254 (329)
58 1hme_A High mobility group pro 22.1 48 0.0016 18.7 1.8 23 18-40 34-56 (77)
59 1ckt_A High mobility group 1 p 20.3 63 0.0021 17.8 2.1 22 19-40 32-53 (71)
No 1
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.80 E-value=2.1e-21 Score=149.03 Aligned_cols=96 Identities=23% Similarity=0.378 Sum_probs=27.2
Q ss_pred CccCCCCCCCCCCChhHHHHHHHHHHHHHhcccccchhhcccCCCCCC----Cc-------c--cchhHHHHHHHHhhhc
Q 033295 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDP----LE-------E--EDEDFYGFVQEMVSMM 67 (122)
Q Consensus 1 lk~HPDkn~~~~~~~~~a~~~F~~i~~AYevLsd~~kR~~YD~~~~~~----~~-------~--~~~~~~~~f~~~f~~~ 67 (122)
++||||+|+ ++ +|+++|++|++||+||+||++|+.||+.+... .. . +..+|.++|++||+++
T Consensus 54 ~~~HPDk~~-~~----~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~~~~~~~~~~~f~~~~f~diF~~~Fg~~ 128 (329)
T 3lz8_A 54 RKYHPDVSK-EN----DAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGRQRQTHEQSYSQQDFDDIFSSMFGQQ 128 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHCCCCCC-Ch----HHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCCcccccccccCCcCCCchhhhhHhhhcCc
Confidence 589999965 33 68899999999999999999999999863211 00 0 1125778899998753
Q ss_pred c------cccccCCchhhhhhHHHHHhcCceeeEeecCCC
Q 033295 68 N------NVKDEGDSFEDLQRMFVEMVDGMSFDFNYDPTD 101 (122)
Q Consensus 68 ~------~~~~~~~~~~~l~~~l~e~~~G~~~~~~~~~~~ 101 (122)
. ...++.|+.++|.|+|+|+|+|++++|.+++.+
T Consensus 129 g~~~~~~~~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v 168 (329)
T 3lz8_A 129 AHQRRRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPV 168 (329)
T ss_dssp --------CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEE
T ss_pred CCCCCCCCcCCCCCEEEEEecchhhhhhccceEEEEEEEe
Confidence 2 123566899999999999999999999996553
No 2
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.59 E-value=3.4e-16 Score=101.65 Aligned_cols=45 Identities=44% Similarity=0.758 Sum_probs=38.9
Q ss_pred CccCCCCCCCCCCChhHHHHHHHHHHHHHhcccccchhhcccCCCCCCC
Q 033295 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPL 49 (122)
Q Consensus 1 lk~HPDkn~~~~~~~~~a~~~F~~i~~AYevLsd~~kR~~YD~~~~~~~ 49 (122)
++||||++..++ +|.++|++|++||+||+||.+|+.||..+....
T Consensus 29 ~~~HPDk~~~~~----~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~ 73 (103)
T 1bq0_A 29 MKYHPDRNQGDK----EAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAF 73 (103)
T ss_dssp TTTCTTTCTTTC----THHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSS
T ss_pred HHHCcCCCCCcH----HHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhh
Confidence 589999987444 688999999999999999999999999776543
No 3
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.50 E-value=3.9e-15 Score=92.08 Aligned_cols=44 Identities=52% Similarity=0.779 Sum_probs=38.4
Q ss_pred CccCCCCCCCCCCChhHHHHHHHHHHHHHhcccccchhhcccCCCCCC
Q 033295 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDP 48 (122)
Q Consensus 1 lk~HPDkn~~~~~~~~~a~~~F~~i~~AYevLsd~~kR~~YD~~~~~~ 48 (122)
++||||++..++ ++.++|++|++||+||+||.+|+.||..+..+
T Consensus 33 ~~~HPD~~~~~~----~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 33 KKYHPDTNKDDP----KAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp HHTCTTTCSSCT----THHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred HHHCcCCCCCCH----HHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 479999987545 68899999999999999999999999987654
No 4
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.50 E-value=1.1e-14 Score=90.65 Aligned_cols=46 Identities=48% Similarity=0.791 Sum_probs=39.1
Q ss_pred CccCCCCCCCCCCChhHHHHHHHHHHHHHhcccccchhhcccCCCCCCC
Q 033295 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPL 49 (122)
Q Consensus 1 lk~HPDkn~~~~~~~~~a~~~F~~i~~AYevLsd~~kR~~YD~~~~~~~ 49 (122)
++||||+++ ...+.+.++|++|++||+||+||.+|+.||..+..+.
T Consensus 35 ~~~HPDk~~---~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 80 (82)
T 2ej7_A 35 LKWHPDKNP---ENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS 80 (82)
T ss_dssp TTSCTTTCS---TTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred HHHCcCCCC---CcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 589999965 3335889999999999999999999999999876543
No 5
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=5.4e-15 Score=97.35 Aligned_cols=46 Identities=33% Similarity=0.582 Sum_probs=39.3
Q ss_pred CccCCCCCCCCCCChhHHHHHHHHHHHHHhcccccchhhcccCCCCCCCc
Q 033295 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPLE 50 (122)
Q Consensus 1 lk~HPDkn~~~~~~~~~a~~~F~~i~~AYevLsd~~kR~~YD~~~~~~~~ 50 (122)
++||||+++.++ +|.++|++|++||+||+||.+|+.||+.+.....
T Consensus 46 ~~~HPDk~~~~~----~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~ 91 (112)
T 2ctq_A 46 LECHPDKHPENP----KAVETFQKLQKAKEILTNEESRARYDHWRRSQMS 91 (112)
T ss_dssp HTTCTTTCTTCS----THHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCS
T ss_pred HHHCcCCCCCcH----HHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccC
Confidence 479999987555 6899999999999999999999999997655444
No 6
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.47 E-value=9.7e-15 Score=89.92 Aligned_cols=44 Identities=41% Similarity=0.745 Sum_probs=37.8
Q ss_pred CccCCCCCCCCCCChhHHHHHHHHHHHHHhcccccchhhcccCCCCCCC
Q 033295 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPL 49 (122)
Q Consensus 1 lk~HPDkn~~~~~~~~~a~~~F~~i~~AYevLsd~~kR~~YD~~~~~~~ 49 (122)
++||||++. ++ .+.++|+.|++||+||+||.+|+.||..+..+.
T Consensus 29 ~~~HPD~~~-~~----~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 72 (77)
T 1hdj_A 29 LRYHPDKNK-EP----GAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGL 72 (77)
T ss_dssp HTTCTTTCC-CT----THHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGC
T ss_pred HHHCcCCCC-Cc----cHHHHHHHHHHHHHHHCCHHHHHHHHHHccccc
Confidence 479999975 34 588999999999999999999999999876543
No 7
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=1.8e-14 Score=88.87 Aligned_cols=43 Identities=42% Similarity=0.669 Sum_probs=37.5
Q ss_pred CccCCCCCCCCCCChhHHHHHHHHHHHHHhcccccchhhcccCCCCCC
Q 033295 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDP 48 (122)
Q Consensus 1 lk~HPDkn~~~~~~~~~a~~~F~~i~~AYevLsd~~kR~~YD~~~~~~ 48 (122)
++||||++. ++ .+.++|++|++||+||+||.+|+.||..+..+
T Consensus 33 ~~~HPDk~~-~~----~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 33 LKFHPDKNH-AP----GATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp TTSCTTTCS-SH----HHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred HHHCcCCCC-Cc----cHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 589999965 33 78999999999999999999999999977643
No 8
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=1.5e-14 Score=93.16 Aligned_cols=42 Identities=43% Similarity=0.729 Sum_probs=37.1
Q ss_pred CccCCCCCCCCCCChhHHHHHHHHHHHHHhcccccchhhcccCCCC
Q 033295 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLY 46 (122)
Q Consensus 1 lk~HPDkn~~~~~~~~~a~~~F~~i~~AYevLsd~~kR~~YD~~~~ 46 (122)
++||||++..++ ++.++|++|++||+||+||.+|+.||....
T Consensus 43 ~~~HPDk~~~~~----~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 84 (99)
T 2yua_A 43 FLYHPDRNSGSA----EAAERFTRISQAYVVLGSATLRRKYDRGLL 84 (99)
T ss_dssp HHSCTTTCSSCS----HHHHHHHHHHHHHHHTTSHHHHHHHHHTCC
T ss_pred HHHCcCCCCCCH----HHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 479999986544 789999999999999999999999998654
No 9
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.44 E-value=8.9e-15 Score=104.33 Aligned_cols=44 Identities=41% Similarity=0.628 Sum_probs=38.2
Q ss_pred CccCCCCCCCCCCChhHHHHHHHHHHHHHhcccccchhhcccCCCCCC
Q 033295 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDP 48 (122)
Q Consensus 1 lk~HPDkn~~~~~~~~~a~~~F~~i~~AYevLsd~~kR~~YD~~~~~~ 48 (122)
++||||+++.++ +|.++|++|++||+||+||.+|+.||+.+...
T Consensus 28 ~~~HPD~~~~~~----~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~ 71 (210)
T 3apq_A 28 LKLHPDKNPNNP----NAHGDFLKINRAYEVLKDEDLRKKYDKYGEKG 71 (210)
T ss_dssp HHHCGGGCTTCT----THHHHHHHHHHHHHHHTSHHHHHHHHHHTTTT
T ss_pred HHHCcCCCCCCh----HHHHHHHHHHHHHHHhCCHHHHHHHHHhcccc
Confidence 479999986555 68899999999999999999999999976544
No 10
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.43 E-value=4.6e-14 Score=89.85 Aligned_cols=47 Identities=26% Similarity=0.548 Sum_probs=38.3
Q ss_pred CccCCCCCCCCC--CChhHHHHHHHHHHHHHhcccccchhhcccCCCCC
Q 033295 1 MKWHPDRSAKNP--GVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYD 47 (122)
Q Consensus 1 lk~HPDkn~~~~--~~~~~a~~~F~~i~~AYevLsd~~kR~~YD~~~~~ 47 (122)
++||||+++.+. ++++.+.++|++|++||+||+||.+|+.||..+..
T Consensus 42 ~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 90 (94)
T 1wjz_A 42 LLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRSG 90 (94)
T ss_dssp SSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSCC
T ss_pred HHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHccC
Confidence 589999976321 12357899999999999999999999999986543
No 11
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.42 E-value=2.2e-14 Score=90.54 Aligned_cols=43 Identities=47% Similarity=0.815 Sum_probs=37.2
Q ss_pred CccCCCCCCCCCCChhHHHHHHHHHHHHHhcccccchhhcccCCCCCC
Q 033295 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDP 48 (122)
Q Consensus 1 lk~HPDkn~~~~~~~~~a~~~F~~i~~AYevLsd~~kR~~YD~~~~~~ 48 (122)
++||||++. ++ .+.++|++|++||+||+||.+|+.||..+..+
T Consensus 43 ~~~HPDk~~-~~----~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 43 REWHPDKNK-DP----GAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp HHSCTTTCC-ST----THHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred HHHCcCCCC-Ch----hHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 479999976 34 68899999999999999999999999977643
No 12
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41 E-value=4e-14 Score=89.96 Aligned_cols=46 Identities=46% Similarity=0.842 Sum_probs=38.5
Q ss_pred CccCCCCCCCCCCChhHHHHHHHHHHHHHhcccccchhhcccCCCCCCC
Q 033295 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPL 49 (122)
Q Consensus 1 lk~HPDkn~~~~~~~~~a~~~F~~i~~AYevLsd~~kR~~YD~~~~~~~ 49 (122)
++||||+++.++ +.|.++|++|++||+||+||.+|+.||..+....
T Consensus 35 ~~~HPDk~~~~~---~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 80 (92)
T 2dmx_A 35 LRWHPDKNPDNK---EEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSW 80 (92)
T ss_dssp HHTCTTTCSSCS---HHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSS
T ss_pred HHHCCCCCCccH---HHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence 479999965433 5899999999999999999999999999665443
No 13
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.40 E-value=3.8e-14 Score=92.86 Aligned_cols=43 Identities=40% Similarity=0.692 Sum_probs=37.4
Q ss_pred CccCCCCCCCCCCChhHHHHHHHHHHHHHhcccccchhhcccCCCCC
Q 033295 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYD 47 (122)
Q Consensus 1 lk~HPDkn~~~~~~~~~a~~~F~~i~~AYevLsd~~kR~~YD~~~~~ 47 (122)
++||||+++.++ +|.++|++|++||+||+||.+|+.||..+..
T Consensus 43 ~~~HPDk~~~~~----~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~ 85 (109)
T 2ctw_A 43 LKYHPDKNPDNP----EAADKFKEINNAHAILTDATKRNIYDKYGSL 85 (109)
T ss_dssp HHSCTTTSTTCH----HHHHHHHHHHHHHHHHTCHHHHHHHHHTCHH
T ss_pred HHHCcCCCCCcH----HHHHHHHHHHHHHHHHcCHHHHHHHHHhccc
Confidence 479999976433 7899999999999999999999999997753
No 14
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.40 E-value=1.2e-14 Score=95.16 Aligned_cols=47 Identities=36% Similarity=0.484 Sum_probs=38.8
Q ss_pred CccCCCCCCCCCCChhHHHHHHHHHHHHHhcccccchhhcccCCCCCC
Q 033295 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDP 48 (122)
Q Consensus 1 lk~HPDkn~~~~~~~~~a~~~F~~i~~AYevLsd~~kR~~YD~~~~~~ 48 (122)
++||||++.+ ++..+.|.++|++|++||+||+||.+|+.||..+..+
T Consensus 42 ~~~HPDk~~~-~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~~ 88 (109)
T 2qsa_A 42 RKHHPDRVKN-KEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDHP 88 (109)
T ss_dssp HHTCGGGCCS-HHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCT
T ss_pred HHHCcCCCCC-ccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccCc
Confidence 4799999752 2233578999999999999999999999999977543
No 15
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=6.9e-14 Score=88.27 Aligned_cols=41 Identities=44% Similarity=0.750 Sum_probs=36.0
Q ss_pred CccCCCCCCCCCCChhHHHHHHHHHHHHHhcccccchhhcccCCCC
Q 033295 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLY 46 (122)
Q Consensus 1 lk~HPDkn~~~~~~~~~a~~~F~~i~~AYevLsd~~kR~~YD~~~~ 46 (122)
++||||++. + .++.++|++|++||+||+||.+|+.||..+.
T Consensus 33 ~~~HPDk~~-~----~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~ 73 (88)
T 2ctr_A 33 MKYHPDKNK-S----PDAEAKFREIAEAYETLSDANRRKEYDTLGH 73 (88)
T ss_dssp HHTCTTTCC-S----HHHHHHHHHHHHHHHHHHSSHHHHHHHHTCH
T ss_pred HHHCcCCCC-C----hHHHHHHHHHHHHHHHHCCHHHHHHHHHhCc
Confidence 479999965 3 3789999999999999999999999998654
No 16
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.36 E-value=6e-14 Score=85.55 Aligned_cols=39 Identities=51% Similarity=0.909 Sum_probs=33.1
Q ss_pred CccCCCCCCCCCCChhHHHHHHHHHHHHHhcccccchhhcccCCCC
Q 033295 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLY 46 (122)
Q Consensus 1 lk~HPDkn~~~~~~~~~a~~~F~~i~~AYevLsd~~kR~~YD~~~~ 46 (122)
++||||++ ++ +.++|++|++||+||+||.+|+.||..|.
T Consensus 34 ~~~HPD~~---~~----~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 34 LKFHPDKN---PD----GAEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp HHTCTTTC---TT----CHHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred HHHCcCCC---cC----HHHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 47999995 42 35799999999999999999999999774
No 17
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.36 E-value=5.7e-14 Score=90.63 Aligned_cols=44 Identities=41% Similarity=0.774 Sum_probs=37.4
Q ss_pred CccCCCCCCCCCCChhHHHHHHHHHHHHHhcccccchhhcccCCCCC
Q 033295 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYD 47 (122)
Q Consensus 1 lk~HPDkn~~~~~~~~~a~~~F~~i~~AYevLsd~~kR~~YD~~~~~ 47 (122)
++||||+++.+ ++.|.++|++|++||+||+||.+|+.||..+..
T Consensus 28 ~~~HPDk~~~~---~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~ 71 (99)
T 2lgw_A 28 LQWHPDKNPDN---KEFAEKKFKEVAEAYEVLSDKHKREIYDRYGRE 71 (99)
T ss_dssp HHTSTTTCCSC---CHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC
T ss_pred HHHCcCCCCcc---HHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcc
Confidence 47999996533 357999999999999999999999999986543
No 18
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.28 E-value=5.2e-13 Score=92.18 Aligned_cols=45 Identities=24% Similarity=0.531 Sum_probs=37.4
Q ss_pred CccCCCCCCCCCC--ChhHHHHHHHHHHHHHhcccccchhhcccCCC
Q 033295 1 MKWHPDRSAKNPG--VAGEAKCRFQQIQEAYSVLSDENKRSMYDAGL 45 (122)
Q Consensus 1 lk~HPDkn~~~~~--~~~~a~~~F~~i~~AYevLsd~~kR~~YD~~~ 45 (122)
++||||++..++. +++.|.++|++|++||+||+||.+|+.||..+
T Consensus 36 ~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~ 82 (155)
T 2l6l_A 36 LMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQR 82 (155)
T ss_dssp HHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHH
T ss_pred HHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 4799999875432 34468899999999999999999999999743
No 19
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.25 E-value=5.3e-13 Score=93.82 Aligned_cols=44 Identities=23% Similarity=0.259 Sum_probs=36.7
Q ss_pred CccCCCCCCCCCC-ChhHHHHHHHHHHHHHhcccccchhhcccCC
Q 033295 1 MKWHPDRSAKNPG-VAGEAKCRFQQIQEAYSVLSDENKRSMYDAG 44 (122)
Q Consensus 1 lk~HPDkn~~~~~-~~~~a~~~F~~i~~AYevLsd~~kR~~YD~~ 44 (122)
++||||+++++++ +++.|.++|+.|++||+||+||.+|+.||..
T Consensus 29 ~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~ 73 (171)
T 1fpo_A 29 RQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLS 73 (171)
T ss_dssp HHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred HHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHH
Confidence 4799999875542 3345778999999999999999999999974
No 20
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.23 E-value=5.1e-13 Score=84.91 Aligned_cols=39 Identities=36% Similarity=0.715 Sum_probs=33.0
Q ss_pred CccCCCCCCCCCCChhHHHHHHHHHHHHHhcccccchhhcccCCCC
Q 033295 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLY 46 (122)
Q Consensus 1 lk~HPDkn~~~~~~~~~a~~~F~~i~~AYevLsd~~kR~~YD~~~~ 46 (122)
++||||+++. ..++|++|++||+||+||.+|+.||..+.
T Consensus 34 ~~~HPDk~~~-------~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~ 72 (92)
T 2o37_A 34 LKYHPDKPTG-------DTEKFKEISEAFEILNDPQKREIYDQYGL 72 (92)
T ss_dssp HHHCTTSTTC-------CHHHHHHHHHHHHHHTSHHHHHHHHHHCH
T ss_pred HHHCcCCCCC-------hHHHHHHHHHHHHHHCCHHHHHHHHHHCH
Confidence 4799999642 23699999999999999999999998654
No 21
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.23 E-value=6.9e-13 Score=95.81 Aligned_cols=43 Identities=19% Similarity=0.183 Sum_probs=35.8
Q ss_pred CccCCCCCCCCCC-ChhHHHHHHHHHHHHHhcccccchhhcccC
Q 033295 1 MKWHPDRSAKNPG-VAGEAKCRFQQIQEAYSVLSDENKRSMYDA 43 (122)
Q Consensus 1 lk~HPDkn~~~~~-~~~~a~~~F~~i~~AYevLsd~~kR~~YD~ 43 (122)
++||||+++++++ +++.|.++|++|++||+||+||.+|+.||.
T Consensus 71 ~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~ 114 (207)
T 3bvo_A 71 RLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL 114 (207)
T ss_dssp HHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred HHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 4799999875442 334578899999999999999999999995
No 22
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.20 E-value=1e-12 Score=109.04 Aligned_cols=46 Identities=43% Similarity=0.656 Sum_probs=18.8
Q ss_pred CccCCCCCCCCCCChhHHHHHHHHHHHHHhcccccchhhcccCCCCCCCc
Q 033295 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPLE 50 (122)
Q Consensus 1 lk~HPDkn~~~~~~~~~a~~~F~~i~~AYevLsd~~kR~~YD~~~~~~~~ 50 (122)
++||||+|++++ +|.++|++|++||+||+||.+|+.||+.|..+..
T Consensus 47 ~~~hpd~~~~~~----~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~ 92 (780)
T 3apo_A 47 LKLHPDKNPNNP----NAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLE 92 (780)
T ss_dssp -------------------------CTHHHHHHSHHHHHHHTTC------
T ss_pred HHHCcCCCCCCh----HHHHHHHHHHHHHHHHcChHHHHHHHhhcccccc
Confidence 589999976444 6889999999999999999999999998765443
No 23
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.20 E-value=1.3e-12 Score=92.03 Aligned_cols=44 Identities=30% Similarity=0.344 Sum_probs=36.0
Q ss_pred CccCCCCCCCCCC-ChhHHHHHHHHHHHHHhcccccchhhcccCC
Q 033295 1 MKWHPDRSAKNPG-VAGEAKCRFQQIQEAYSVLSDENKRSMYDAG 44 (122)
Q Consensus 1 lk~HPDkn~~~~~-~~~~a~~~F~~i~~AYevLsd~~kR~~YD~~ 44 (122)
++||||++++.++ ++..|.++|+.|++||+||+||.+|+.||..
T Consensus 32 ~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~ 76 (174)
T 3hho_A 32 KRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLS 76 (174)
T ss_dssp HHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred HHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 4799999875442 2234789999999999999999999999973
No 24
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.18 E-value=4.2e-12 Score=83.86 Aligned_cols=37 Identities=16% Similarity=0.295 Sum_probs=32.1
Q ss_pred CccCCCCCCCCCCChhHHHHHHHHHHHHHhcccccchhhcccCCC
Q 033295 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGL 45 (122)
Q Consensus 1 lk~HPDkn~~~~~~~~~a~~~F~~i~~AYevLsd~~kR~~YD~~~ 45 (122)
++||||+++ + .++|++|++||+||+||.+|+.||..+
T Consensus 36 ~~~HPDk~~---~-----~e~f~~I~~AYevL~d~~~R~~~~~~~ 72 (114)
T 1gh6_A 36 KEFHPDKGG---D-----EEKMKKMNTLYKKMEDGVKYAHQPDFG 72 (114)
T ss_dssp TTCCTTTCC---T-----TTTTHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred HHHCCCCCc---c-----HHHHHHHHHHHHHHCCHHHHHHhhhcc
Confidence 689999954 2 368999999999999999999999754
No 25
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.16 E-value=2.7e-12 Score=90.39 Aligned_cols=38 Identities=16% Similarity=0.271 Sum_probs=31.0
Q ss_pred CccCCCCCCCCCCChhHHHHHHHHHHHHHhcccccchhhcccCCCC
Q 033295 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLY 46 (122)
Q Consensus 1 lk~HPDkn~~~~~~~~~a~~~F~~i~~AYevLsd~~kR~~YD~~~~ 46 (122)
++||||+++ + .++|++|++||+||+||.+|+.||+.|.
T Consensus 39 ~~~HPDk~~-~-------~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 39 KEFHPDKGG-D-------EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp GGCSCC----C-------CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred HHHCcCCCC-C-------HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 579999954 2 2689999999999999999999999773
No 26
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.13 E-value=8.2e-12 Score=79.05 Aligned_cols=35 Identities=23% Similarity=0.377 Sum_probs=30.4
Q ss_pred CccCCCCCCCCCCChhHHHHHHHHHHHHHhcccccchhhc
Q 033295 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSM 40 (122)
Q Consensus 1 lk~HPDkn~~~~~~~~~a~~~F~~i~~AYevLsd~~kR~~ 40 (122)
++||||+++ ++ .+.++|++|++||+||+||.+|+.
T Consensus 53 ~~~HPDk~~-~~----~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 53 VLLHPDKCV-AP----GSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp HHHCTTTCC-CT----THHHHHHHHHHHHHHHHHHHCCSC
T ss_pred HHHCcCCCC-Cc----cHHHHHHHHHHHHHHHCCcccccC
Confidence 479999976 34 588899999999999999999974
No 27
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.08 E-value=4e-11 Score=75.73 Aligned_cols=38 Identities=24% Similarity=0.415 Sum_probs=31.1
Q ss_pred CccCCCCCCCCCCChhHHHHHHHHHHHHHhcccccchhhcc
Q 033295 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMY 41 (122)
Q Consensus 1 lk~HPDkn~~~~~~~~~a~~~F~~i~~AYevLsd~~kR~~Y 41 (122)
++||||+|+ ++.++|.++|++|++||+||+|...|..+
T Consensus 42 ~~~HPDk~~---~~~~~a~~~F~~I~~AYevL~~~~~r~~~ 79 (88)
T 1iur_A 42 LKWHPDKNP---ENHDIANEVFKHLQNEINRLEKQAFLDQN 79 (88)
T ss_dssp HHTCTTTSS---SCHHHHHHHHHHHHHHHHHHHHHTTCSSS
T ss_pred HHHCCCCCC---CchHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 479999954 33357999999999999999998887443
No 28
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=98.99 E-value=8.1e-12 Score=81.47 Aligned_cols=37 Identities=22% Similarity=0.306 Sum_probs=28.6
Q ss_pred CccCCCCCCC---CCCChhHHHHHHHHHHHHHhcccccch
Q 033295 1 MKWHPDRSAK---NPGVAGEAKCRFQQIQEAYSVLSDENK 37 (122)
Q Consensus 1 lk~HPDkn~~---~~~~~~~a~~~F~~i~~AYevLsd~~k 37 (122)
|+||||||+. +++.+..|+++|++|++||+||||+..
T Consensus 66 l~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~~ 105 (106)
T 3ag7_A 66 LILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLGP 105 (106)
T ss_dssp HHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred HHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCccc
Confidence 5799999762 122334689999999999999999863
No 29
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=98.97 E-value=1.4e-11 Score=87.30 Aligned_cols=38 Identities=29% Similarity=0.449 Sum_probs=32.8
Q ss_pred CccCCCCCCCCCCChhHHHHHHHHHHHHHhcccccchhhcccCCC
Q 033295 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGL 45 (122)
Q Consensus 1 lk~HPDkn~~~~~~~~~a~~~F~~i~~AYevLsd~~kR~~YD~~~ 45 (122)
++||||++++ |.++|+.|++||+||+||.+|+.||...
T Consensus 44 ~~~HPDk~~~-------a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 44 AQHHPDMAQQ-------GSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp HTCCTTSCCS-------CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred HHhCcCCCcc-------HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 4799999642 5578999999999999999999999843
No 30
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=98.91 E-value=1.7e-10 Score=71.37 Aligned_cols=36 Identities=17% Similarity=0.374 Sum_probs=29.7
Q ss_pred CccCCCCCCCCCCChhHHHHHHHHHHHHHhcccccchhhcccCC
Q 033295 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAG 44 (122)
Q Consensus 1 lk~HPDkn~~~~~~~~~a~~~F~~i~~AYevLsd~~kR~~YD~~ 44 (122)
++||||++. +.++|++|++||+||+|+.+|..++-+
T Consensus 39 ~~~HPDk~~--------~~~~f~~i~~AYe~L~~~~~r~~~~~g 74 (79)
T 1faf_A 39 LLLHPDKGG--------SHALMQELNSLWGTFKTEVYNLRMNLG 74 (79)
T ss_dssp HHSSGGGSC--------CHHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred HHHCcCCCC--------CHHHHHHHHHHHHHHhhHHHHHHHhcC
Confidence 479999953 247899999999999999999985543
No 31
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.84 E-value=3.8e-10 Score=85.56 Aligned_cols=43 Identities=37% Similarity=0.628 Sum_probs=30.6
Q ss_pred CccCCCCCCCCCCChhHHHHHHHHHHHHHhcccccchhhcccCC
Q 033295 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAG 44 (122)
Q Consensus 1 lk~HPDkn~~~~~~~~~a~~~F~~i~~AYevLsd~~kR~~YD~~ 44 (122)
+++|||+.+ .++++++|.++|++|++||+||+||++|+.||.|
T Consensus 408 l~~~pd~~~-~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~g 450 (450)
T 2y4t_A 408 LQWHPDNFQ-NEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDDG 450 (450)
T ss_dssp HHSCGGGCC-SHHHHHHHHHHHHHHHHHHHHSSGGGGC------
T ss_pred HHhCCCCCC-CchHHHHHHHHHHHHHHHHHHhCCHHHHHhccCC
Confidence 468999964 2222457999999999999999999999999975
No 32
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=98.83 E-value=3.2e-10 Score=72.12 Aligned_cols=33 Identities=24% Similarity=0.407 Sum_probs=26.3
Q ss_pred CccCCCCCCCCCCChhHHHHHHHHHHHHHhcccc
Q 033295 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSD 34 (122)
Q Consensus 1 lk~HPDkn~~~~~~~~~a~~~F~~i~~AYevLsd 34 (122)
|+||||||++++. ...|.++|++|++||+||.+
T Consensus 59 l~~HPDK~~~~~~-~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 59 LVVHPCKATGQPY-EQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp HHTCHHHHTTSTT-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCcCCCCCchh-HhHHHHHHHHHHHHHHHHHh
Confidence 5799999764432 23589999999999999975
No 33
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.67 E-value=2e-09 Score=65.14 Aligned_cols=31 Identities=23% Similarity=0.321 Sum_probs=25.3
Q ss_pred CccCCCCCCCCCCChhHHHHHHHHHHHHHhcccccchhh
Q 033295 1 MKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRS 39 (122)
Q Consensus 1 lk~HPDkn~~~~~~~~~a~~~F~~i~~AYevLsd~~kR~ 39 (122)
++||||++. + .++|++|++||+||+|+..|+
T Consensus 41 ~~~HPDk~g-~-------~~~f~~i~~Aye~L~~~~~rk 71 (71)
T 2guz_A 41 LANHPDKGG-S-------PFLATKINEAKDFLEKRGISK 71 (71)
T ss_dssp HHHCGGGTC-C-------HHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHCCCCCC-C-------HHHHHHHHHHHHHHhhhhhcC
Confidence 479999952 2 359999999999999998764
No 34
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.50 E-value=5.6e-09 Score=67.46 Aligned_cols=42 Identities=19% Similarity=0.366 Sum_probs=37.0
Q ss_pred CCchhhhhhHHHHHhcCceeeEeecCCCcccccccCCCccccCCCC
Q 033295 74 GDSFEDLQRMFVEMVDGMSFDFNYDPTDAQRACVNTSKGKAAKRGT 119 (122)
Q Consensus 74 ~~~~~~l~~~l~e~~~G~~~~~~~~~~~~~~~~C~~C~G~G~~~~~ 119 (122)
.++.++|.|+|+|||+|.+++|.|++.. .|+.|+|+|+++++
T Consensus 2 ~~~~~~l~vslee~~~G~~~~i~~~~~~----~C~~C~G~G~~~g~ 43 (104)
T 2ctt_A 2 SSGSSGMELTFNQAAKGVNKEFTVNIMD----TCERCNGKGNEPGT 43 (104)
T ss_dssp CCCCCCCCCCCSSCCSSSCTTCCSSCCE----ECSSSSSSSSCTTC
T ss_pred CceEEEEEEEHHHHcCCCEEEEEeeeee----ECCCCcCCccCCCC
Confidence 4677899999999999999999997765 99999999988764
No 35
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=98.39 E-value=3.7e-08 Score=72.65 Aligned_cols=46 Identities=13% Similarity=0.256 Sum_probs=39.4
Q ss_pred ccccCCchhhhhhHHHHHhcCceeeEeecCCCcccccccCCCccccCCCC
Q 033295 70 VKDEGDSFEDLQRMFVEMVDGMSFDFNYDPTDAQRACVNTSKGKAAKRGT 119 (122)
Q Consensus 70 ~~~~~~~~~~l~~~l~e~~~G~~~~~~~~~~~~~~~~C~~C~G~G~~~~~ 119 (122)
.+++.|+.++|.+||+|+|+|++++|.|++.. .|..|+|+|+++++
T Consensus 8 ~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~----~C~~C~G~G~~~g~ 53 (248)
T 1nlt_A 8 PQRGKDIKHEISASLEELYKGRTAKLALNKQI----LCKECEGRGGKKGA 53 (248)
T ss_dssp CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEE----ECTTTTTCSBSTTT
T ss_pred CCCCCCEEEEEEecHHHhcCCceEEEEeeEEE----eCCCCcCccCCCCC
Confidence 34567999999999999999999999996654 89999999987653
No 36
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=97.88 E-value=3.8e-06 Score=59.32 Aligned_cols=24 Identities=25% Similarity=0.621 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHhcccccchhhcc
Q 033295 18 AKCRFQQIQEAYSVLSDENKRSMY 41 (122)
Q Consensus 18 a~~~F~~i~~AYevLsd~~kR~~Y 41 (122)
|+++|++|++||+||+||.+|+.|
T Consensus 159 A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 159 AKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHHHHHHHCCHHhhhhC
Confidence 889999999999999999999988
No 37
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=97.47 E-value=1.7e-05 Score=55.72 Aligned_cols=37 Identities=16% Similarity=0.175 Sum_probs=29.9
Q ss_pred CCchhhhhhHHHHHhcCceeeEeecCCCcccccccCCCccccC
Q 033295 74 GDSFEDLQRMFVEMVDGMSFDFNYDPTDAQRACVNTSKGKAAK 116 (122)
Q Consensus 74 ~~~~~~l~~~l~e~~~G~~~~~~~~~~~~~~~~C~~C~G~G~~ 116 (122)
.|+.++|.+||+|+|+|++++|.+++ .|..|+|.|..
T Consensus 3 ~d~~~~l~islee~~~G~~k~i~i~~------~c~~c~G~g~~ 39 (181)
T 3agx_A 3 PPVTHDLRVSLEEIYSGCTKKMKISH------KRLNPDGKSIR 39 (181)
T ss_dssp ---CEEEEECHHHHHHCEEEEEEEEE------EEECTTSSCEE
T ss_pred CCEEEEEEEEHHHhcCCcEEEEEEec------ccCCCCCceEE
Confidence 46778899999999999999999953 49999998854
No 38
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=95.75 E-value=0.0011 Score=46.23 Aligned_cols=29 Identities=10% Similarity=-0.051 Sum_probs=25.2
Q ss_pred cCCchhhhhhHHHHHhcCceeeEeecCCC
Q 033295 73 EGDSFEDLQRMFVEMVDGMSFDFNYDPTD 101 (122)
Q Consensus 73 ~~~~~~~l~~~l~e~~~G~~~~~~~~~~~ 101 (122)
+.|+.++|.+||+|+|+|++++|.+++.+
T Consensus 3 g~d~~~~l~islee~~~G~~k~i~~~~~~ 31 (180)
T 2q2g_A 3 PRSHEVPLLVTLEELYLGKRKKIKVTRKR 31 (180)
T ss_dssp -CEEEEEEEECHHHHHHCEEEEEEEEEEE
T ss_pred CCCEEEEEEeeHHHhcCCcEEEEEEeEEE
Confidence 45788999999999999999999997654
No 39
>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}
Probab=94.18 E-value=0.0012 Score=54.60 Aligned_cols=39 Identities=13% Similarity=0.140 Sum_probs=34.5
Q ss_pred hhhhhhHHHHHhcCceeeEeecCCCcccccccCCCccccCCCC
Q 033295 77 FEDLQRMFVEMVDGMSFDFNYDPTDAQRACVNTSKGKAAKRGT 119 (122)
Q Consensus 77 ~~~l~~~l~e~~~G~~~~~~~~~~~~~~~~C~~C~G~G~~~~~ 119 (122)
.+.+.++|+|++.|..++++|.+.. .|..|.|+|++.++
T Consensus 168 ~~~l~i~feeA~~G~~k~i~v~~~~----~C~tCHGsGA~~Gt 206 (669)
T 3pmq_A 168 ITNQHYDWQSSGNMLAYTRNLVSID----TCNSCHSNLAFHGG 206 (669)
T ss_dssp SCCCEEEEECSSSSCCCCCCCCCSH----HHHHHHSSCCTTTT
T ss_pred eEEEEEEhHHhhCCCceEEEeccCC----cCCCCCCCCCcCCc
Confidence 4778999999999999999996665 99999999998875
No 40
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=94.02 E-value=0.0096 Score=41.07 Aligned_cols=25 Identities=12% Similarity=0.118 Sum_probs=22.2
Q ss_pred CchhhhhhHHHHHhcCceeeEeecC
Q 033295 75 DSFEDLQRMFVEMVDGMSFDFNYDP 99 (122)
Q Consensus 75 ~~~~~l~~~l~e~~~G~~~~~~~~~ 99 (122)
|+.++|.+||+|+|+|++++|++++
T Consensus 2 d~~~~l~islee~~~G~~k~i~~~~ 26 (170)
T 1c3g_A 2 TVQVNLPVSLEDLFVGKKKSFKIGR 26 (170)
T ss_dssp EEEEEEEECHHHHHHTCEEEEEEEE
T ss_pred CEEEEEEeEHHHhhCCcEEEEEEEE
Confidence 5667899999999999999999965
No 41
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=93.26 E-value=0.016 Score=34.67 Aligned_cols=25 Identities=20% Similarity=0.387 Sum_probs=17.2
Q ss_pred CceeeEeecCCCcccccccCCCccccCCC
Q 033295 90 GMSFDFNYDPTDAQRACVNTSKGKAAKRG 118 (122)
Q Consensus 90 G~~~~~~~~~~~~~~~~C~~C~G~G~~~~ 118 (122)
|.+++|.|++.. .|+.|+|+|..++
T Consensus 1 G~~~~i~~~~~~----~C~~C~G~G~~~~ 25 (79)
T 1exk_A 1 GVTKEIRIPTLE----ECDVCHGSGAKPG 25 (79)
T ss_dssp CTTTSCCCCCEE----ECGGGTTTSBCSS
T ss_pred CcEEEEEcccce----ECCCCcccccCCC
Confidence 556777775554 7888888886543
No 42
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=87.27 E-value=0.17 Score=29.43 Aligned_cols=25 Identities=8% Similarity=-0.076 Sum_probs=19.1
Q ss_pred ccCCCCCCCCCCChhHHHHHHHHHHHHHhcccc
Q 033295 2 KWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSD 34 (122)
Q Consensus 2 k~HPDkn~~~~~~~~~a~~~F~~i~~AYevLsd 34 (122)
..|||+.. ..-....|++|+++|-.
T Consensus 34 ~nhPDkGG--------S~yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 34 VNDKEKGG--------SFYLQSKVYRAAERLKW 58 (65)
T ss_dssp HTCGGGTC--------CHHHHHHHHHHHHHHHH
T ss_pred HhCCCCCC--------CHHHHHHHHHHHHHHHH
Confidence 47999942 23678889999999864
No 43
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=79.64 E-value=0.38 Score=26.87 Aligned_cols=13 Identities=8% Similarity=0.130 Sum_probs=7.1
Q ss_pred cccCCCccccCCC
Q 033295 106 CVNTSKGKAAKRG 118 (122)
Q Consensus 106 ~C~~C~G~G~~~~ 118 (122)
.|+.|+|+|....
T Consensus 11 ~C~~C~GsG~~~~ 23 (53)
T 2bx9_A 11 ACPKCERAGEIEG 23 (53)
T ss_dssp ECTTTTTSSEETT
T ss_pred cCCCCcceeccCC
Confidence 5666666655443
No 44
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=79.53 E-value=0.36 Score=26.93 Aligned_cols=14 Identities=7% Similarity=0.173 Sum_probs=8.7
Q ss_pred ccccCCCccccCCC
Q 033295 105 ACVNTSKGKAAKRG 118 (122)
Q Consensus 105 ~~C~~C~G~G~~~~ 118 (122)
..|+.|+|+|....
T Consensus 10 ~~C~~C~GsG~~i~ 23 (53)
T 3lcz_A 10 TTCPNCNGSGREEP 23 (53)
T ss_dssp EECTTTTTSCEETT
T ss_pred ccCcCCcccccCCC
Confidence 35777777776544
No 45
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=70.87 E-value=0.73 Score=29.25 Aligned_cols=26 Identities=12% Similarity=-0.222 Sum_probs=21.8
Q ss_pred ccCCchhhhhhHHHHHhcCceeeEee
Q 033295 72 DEGDSFEDLQRMFVEMVDGMSFDFNY 97 (122)
Q Consensus 72 ~~~~~~~~l~~~l~e~~~G~~~~~~~ 97 (122)
.+.|++.++.|+|.||+.|++.+|..
T Consensus 10 ~G~DL~~~~~Isl~eAl~G~~i~v~t 35 (109)
T 3i38_A 10 VGHNLEIVLPLAPWEAALGAKVTVPT 35 (109)
T ss_dssp ETTEEEEEEEECHHHHHHCEEEEECC
T ss_pred ECCEEEEEEEcCHHHHhCCCEEEEEc
Confidence 45688899999999999999877754
No 46
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=62.77 E-value=1.5 Score=28.25 Aligned_cols=25 Identities=16% Similarity=0.275 Sum_probs=21.1
Q ss_pred ccCCchhhhhhHHHHHhcCceeeEe
Q 033295 72 DEGDSFEDLQRMFVEMVDGMSFDFN 96 (122)
Q Consensus 72 ~~~~~~~~l~~~l~e~~~G~~~~~~ 96 (122)
.+.|.+.++.|+|.+|+.|++..|.
T Consensus 5 ~G~DL~~~~~Isl~eAllG~~i~v~ 29 (121)
T 1xao_A 5 DGDDLVYEAEIDLLTAIAGGEFALE 29 (121)
T ss_dssp ETTEEEEEEEEEHHHHHHCEEEEEE
T ss_pred ECCeEEEEEEcCHHHHhCCCEEEEe
Confidence 4568889999999999999987664
No 47
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=46.07 E-value=4.4 Score=27.44 Aligned_cols=25 Identities=28% Similarity=0.258 Sum_probs=21.2
Q ss_pred ccCCchhhhhhHHHHHhcCceeeEe
Q 033295 72 DEGDSFEDLQRMFVEMVDGMSFDFN 96 (122)
Q Consensus 72 ~~~~~~~~l~~~l~e~~~G~~~~~~ 96 (122)
.+.|.+.++.|+|.+|+.|.+..|.
T Consensus 85 ~G~DL~~~~~Isl~eAllG~~~~v~ 109 (170)
T 1c3g_A 85 DGDDLIYTLPLSFKESLLGFSKTIQ 109 (170)
T ss_dssp ETTEEEEEECCBHHHHHHCEEEEEE
T ss_pred eCCcEeEEEEcCHHHHhCCCeEEee
Confidence 3558889999999999999987764
No 48
>1ag7_A Conotoxin GS; neurotoxin, MU-conotoxin, sodium channel blocker, cystine knot motif; HET: HYP CGU; NMR {Conus geographus} SCOP: g.3.6.1
Probab=44.54 E-value=9.9 Score=18.46 Aligned_cols=13 Identities=15% Similarity=0.503 Sum_probs=9.6
Q ss_pred CCccccCCCCCCC
Q 033295 110 SKGKAAKRGTSRC 122 (122)
Q Consensus 110 C~G~G~~~~~~~~ 122 (122)
|.|.|+.-+..||
T Consensus 2 csgrgsrcppqcc 14 (34)
T 1ag7_A 2 CSGRGSRCPPQCC 14 (34)
T ss_dssp CBCTTSCSSSCBC
T ss_pred CcCCCCCCChhhc
Confidence 7777777777776
No 49
>1cf7_A Protein (transcription factor E2F-4); E2F, winged-helix, DNA-binding domain, cell cycle, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: a.4.5.17
Probab=43.90 E-value=6.4 Score=23.31 Aligned_cols=19 Identities=32% Similarity=0.482 Sum_probs=12.5
Q ss_pred HHHHHhcccccchhhcccC
Q 033295 25 IQEAYSVLSDENKRSMYDA 43 (122)
Q Consensus 25 i~~AYevLsd~~kR~~YD~ 43 (122)
|++|-+.|.-.++|+.||-
T Consensus 33 l~~aa~~L~v~~kRRiYDI 51 (76)
T 1cf7_A 33 LKLAADTLAVRQKRRIYDI 51 (76)
T ss_dssp HHHHHHHTTTCCTHHHHHH
T ss_pred HHHHHHHhCCccceehhhH
Confidence 4455556654478999885
No 50
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=43.40 E-value=4.7 Score=27.60 Aligned_cols=25 Identities=16% Similarity=0.166 Sum_probs=21.2
Q ss_pred ccCCchhhhhhHHHHHhcCceeeEe
Q 033295 72 DEGDSFEDLQRMFVEMVDGMSFDFN 96 (122)
Q Consensus 72 ~~~~~~~~l~~~l~e~~~G~~~~~~ 96 (122)
.+.|++.++.|+|.+|+.|.+..|.
T Consensus 91 ~G~DL~~~~~Isl~eAllG~~i~v~ 115 (181)
T 3agx_A 91 DGSDVIYPARISLREALCGCTVNVP 115 (181)
T ss_dssp ETTEEEEEEEEEHHHHHHCEEEEEE
T ss_pred eCCcEEEEEEcCHHHHhCCCEEEeE
Confidence 3558889999999999999987765
No 51
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=41.77 E-value=5.2 Score=27.33 Aligned_cols=26 Identities=12% Similarity=0.181 Sum_probs=21.4
Q ss_pred ccCCchhhhhhHHHHHhcCceeeEee
Q 033295 72 DEGDSFEDLQRMFVEMVDGMSFDFNY 97 (122)
Q Consensus 72 ~~~~~~~~l~~~l~e~~~G~~~~~~~ 97 (122)
.+.|.+.++.|+|.+|+.|.+..|..
T Consensus 91 ~G~DL~~~~~Isl~eAllG~~i~v~t 116 (180)
T 2q2g_A 91 DDCHLIMKVTIPLVRALTGFTCPVTT 116 (180)
T ss_dssp ETTEEEEEEEEEHHHHHHCEEEEEEC
T ss_pred cCCEEEEEEEcCHHHHhCCCEEEeeC
Confidence 35588899999999999998876643
No 52
>1eyo_A Conotoxin TVIIA; cystine knot motif; HET: HYP; NMR {Synthetic} SCOP: g.3.6.1
Probab=41.01 E-value=14 Score=17.55 Aligned_cols=14 Identities=14% Similarity=0.456 Sum_probs=9.4
Q ss_pred CCCccccCCCCCCC
Q 033295 109 TSKGKAAKRGTSRC 122 (122)
Q Consensus 109 ~C~G~G~~~~~~~~ 122 (122)
.|.|.|+.-+..||
T Consensus 1 ~csgr~srcpp~cc 14 (30)
T 1eyo_A 1 SCSGRDSRCPPVCC 14 (30)
T ss_dssp CCBCTTSSCSSSBC
T ss_pred CCcCCCCCCCchhe
Confidence 36677777666665
No 53
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=39.00 E-value=6 Score=28.45 Aligned_cols=26 Identities=15% Similarity=0.236 Sum_probs=21.7
Q ss_pred ccCCchhhhhhHHHHHhcCceeeEee
Q 033295 72 DEGDSFEDLQRMFVEMVDGMSFDFNY 97 (122)
Q Consensus 72 ~~~~~~~~l~~~l~e~~~G~~~~~~~ 97 (122)
.+.|++.++.|+|.||+.|.+..|..
T Consensus 160 ~G~DL~~~~~Isl~eAllG~~i~v~t 185 (248)
T 1nlt_A 160 DGDDLVYEAEIDLLTAIAGGEFALEH 185 (248)
T ss_dssp ETTEEEEEEEEEHHHHHHCBCCEEEC
T ss_pred eCCEEEEEEEeCHHHHhcCCEEEEeC
Confidence 35588999999999999999887753
No 54
>2bx2_L Ribonuclease E, RNAse E; RNA-binding, RNA turnover, RNA processing, hydrolase, endonu nuclease; 2.85A {Escherichia coli} PDB: 2c0b_L 2c4r_L 2vmk_A 2vrt_A 1slj_A 1smx_A 1sn8_A
Probab=32.79 E-value=20 Score=28.78 Aligned_cols=14 Identities=14% Similarity=0.221 Sum_probs=11.3
Q ss_pred ccccCCCccccCCC
Q 033295 105 ACVNTSKGKAAKRG 118 (122)
Q Consensus 105 ~~C~~C~G~G~~~~ 118 (122)
..|+.|+|+|....
T Consensus 409 ~~Cp~C~G~G~v~s 422 (517)
T 2bx2_L 409 HVCPRCSGTGTVRD 422 (517)
T ss_dssp CCCSSSSSSSCCCC
T ss_pred CcCCCcCCceeECC
Confidence 46999999997653
No 55
>3u7d_B Protein HEG homolog 1; FERM domain, RAP1 effector, membrane protein cytoplasmic TAI protein binding; 2.49A {Homo sapiens}
Probab=28.01 E-value=15 Score=16.90 Aligned_cols=11 Identities=45% Similarity=0.797 Sum_probs=8.5
Q ss_pred cccccchhhcc
Q 033295 31 VLSDENKRSMY 41 (122)
Q Consensus 31 vLsd~~kR~~Y 41 (122)
.|||+.+|+.|
T Consensus 15 fisddsrrrdy 25 (26)
T 3u7d_B 15 FISDESRRRDY 25 (26)
T ss_pred cccCcchhccc
Confidence 57888888766
No 56
>1i11_A Transcription factor SOX-5; HMG BOX, DNA bending, DNA recognition, chromatin, DNA binding protein, DNA sequence specific, testis determining.; NMR {Mus musculus} SCOP: a.21.1.1
Probab=25.10 E-value=42 Score=19.23 Aligned_cols=25 Identities=8% Similarity=0.243 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHhcccccchhhccc
Q 033295 18 AKCRFQQIQEAYSVLSDENKRSMYD 42 (122)
Q Consensus 18 a~~~F~~i~~AYevLsd~~kR~~YD 42 (122)
..+.-+.|.+.+.-|++++|...++
T Consensus 32 ~~eisk~lg~~Wk~ls~eeK~~y~~ 56 (81)
T 1i11_A 32 NSNISKILGSRWKAMTNLEKQPYYE 56 (81)
T ss_dssp HHHHHHHHHHHHTTSCSGGGHHHHH
T ss_pred HHHHHHHHHhhhhhCCHHHHHHHHH
Confidence 4567888999999999887765444
No 57
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=24.42 E-value=14 Score=27.77 Aligned_cols=24 Identities=13% Similarity=-0.175 Sum_probs=19.9
Q ss_pred cCCchhhhhhHHHHHhcCceeeEe
Q 033295 73 EGDSFEDLQRMFVEMVDGMSFDFN 96 (122)
Q Consensus 73 ~~~~~~~l~~~l~e~~~G~~~~~~ 96 (122)
+.|++.++.|+|.||+.|.+..|.
T Consensus 231 G~DL~~~~~Isl~eAllG~~v~Vp 254 (329)
T 3lz8_A 231 GHNLEIVLPLAPWEAALGAKVTVP 254 (329)
T ss_dssp TTEEEEEEEECHHHHHHCEEEEEC
T ss_pred CCcEEEEEECCHHHHcCCCeEEEE
Confidence 446788889999999999887764
No 58
>1hme_A High mobility group protein fragment-B; DNA-binding; NMR {Rattus norvegicus} SCOP: a.21.1.1 PDB: 1hmf_A 1nhm_A 1nhn_A 1hsm_A 1hsn_A 1j3c_A 1j3d_A 2yqi_A
Probab=22.10 E-value=48 Score=18.68 Aligned_cols=23 Identities=9% Similarity=0.153 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHhcccccchhhc
Q 033295 18 AKCRFQQIQEAYSVLSDENKRSM 40 (122)
Q Consensus 18 a~~~F~~i~~AYevLsd~~kR~~ 40 (122)
..+..+.|.+.+.-|++.++...
T Consensus 34 ~~eisk~lg~~Wk~ls~~eK~~y 56 (77)
T 1hme_A 34 IGDVAKKLGEMWNNTAADDKQPY 56 (77)
T ss_dssp HHHHHHHHHHHHHHSCGGGSHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHH
Confidence 45678889999999998877544
No 59
>1ckt_A High mobility group 1 protein; high-mobility group domain, BENT DNA, protein-drug-DNA compl regulation-DNA complex; HET: DNA 5IU; 2.50A {Rattus norvegicus} SCOP: a.21.1.1 PDB: 1j3x_A
Probab=20.35 E-value=63 Score=17.78 Aligned_cols=22 Identities=14% Similarity=0.170 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHhcccccchhhc
Q 033295 19 KCRFQQIQEAYSVLSDENKRSM 40 (122)
Q Consensus 19 ~~~F~~i~~AYevLsd~~kR~~ 40 (122)
.+.-+.|.+.+.-|++.+|...
T Consensus 32 ~eisk~lg~~Wk~ls~~eK~~y 53 (71)
T 1ckt_A 32 SEFSKKCSERWKTMSAKEKGKF 53 (71)
T ss_dssp HHHHHHHHHHHHTCCTTTSHHH
T ss_pred HHHHHHHHHHHhhCCHHHHHHH
Confidence 5778889999999998877543
Done!