BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 033298
         (122 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q54WU6|SESN_DICDI Sestrin homolog OS=Dictyostelium discoideum GN=DDB_G0279427 PE=3
           SV=1
          Length = 601

 Score = 31.6 bits (70), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 33/89 (37%), Gaps = 10/89 (11%)

Query: 26  PFTQQYSLSSPPKPRAHGQFKVYANLGGRDGEVKPKGKRKFVTREEEPDEFWQTAGEREG 85
           PF   YS  + P+         + NL   D +V+       +     PD           
Sbjct: 45  PFGSDYSPPASPQNELDPLSSYFLNLQSEDNDVRKTAIEYIINTLSNPDN---------- 94

Query: 86  ENPMKTPIPYIIIFGMSTPFVILAIAFAN 114
           E  +K  +P I++    +PF  ++ AF N
Sbjct: 95  EKLIKNHLPMIVVLSTESPFDDISEAFTN 123


>sp|P84449|GN_EHV1V Glycoprotein N OS=Equine herpesvirus 1 (strain V592) GN=10 PE=3
           SV=1
          Length = 100

 Score = 30.4 bits (67), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 63  KRKFVTREEEPDEFWQTAGEREGENPMKTPIPYIIIFGMSTPFVILAIA 111
           +R  V REEE  +FW  A    G  P+ TP    I+F +S   V +A+A
Sbjct: 33  QRIDVAREEERRDFWHAACSGHG-FPITTPSTAAILFYVSLLAVGVAVA 80


>sp|P28980|GN_EHV1B Glycoprotein N OS=Equine herpesvirus 1 (strain Ab4p) GN=10 PE=1
           SV=1
          Length = 100

 Score = 30.4 bits (67), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 63  KRKFVTREEEPDEFWQTAGEREGENPMKTPIPYIIIFGMSTPFVILAIA 111
           +R  V REEE  +FW  A    G  P+ TP    I+F +S   V +A+A
Sbjct: 33  QRIDVAREEERRDFWHAACSGHG-FPITTPSTAAILFYVSLLAVGVAVA 80


>sp|P46109|CRKL_HUMAN Crk-like protein OS=Homo sapiens GN=CRKL PE=1 SV=1
          Length = 303

 Score = 30.4 bits (67), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 4/76 (5%)

Query: 32  SLSSPPKPRAHGQF---KVYANLGGRDGEVKPKGKRKFVTREEEPDEFWQTAGEREGENP 88
           S+S+P  P A       +   +  G D E  P  K + +   E+P+E W +A  ++G   
Sbjct: 112 SVSAPNLPTAEDNLEYVRTLYDFPGNDAEDLPFKKGEILVIIEKPEEQWWSARNKDGRVG 171

Query: 89  MKTPIPYIIIFGMSTP 104
           M  P+PY+     S+P
Sbjct: 172 M-IPVPYVEKLVRSSP 186


>sp|P47941|CRKL_MOUSE Crk-like protein OS=Mus musculus GN=Crkl PE=1 SV=2
          Length = 303

 Score = 30.0 bits (66), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 4/76 (5%)

Query: 32  SLSSPPKPRAHGQF---KVYANLGGRDGEVKPKGKRKFVTREEEPDEFWQTAGEREGENP 88
           S+S+P  P A       +   +  G D E  P  K + +   E+P+E W +A  ++G   
Sbjct: 112 SVSAPNLPTAEENLEYVRTLYDFPGNDAEDLPFKKGELLVIIEKPEEQWWSARNKDGRVG 171

Query: 89  MKTPIPYIIIFGMSTP 104
           M  P+PY+     S+P
Sbjct: 172 M-IPVPYVEKLVRSSP 186


>sp|O55092|SLK_CAVPO STE20-like serine/threonine-protein kinase OS=Cavia porcellus
          GN=SLK PE=1 SV=1
          Length = 1231

 Score = 29.6 bits (65), Expect = 5.7,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 17/27 (62%)

Query: 56 GEVKPKGKRKFVTREEEPDEFWQTAGE 82
          G  K K + + V R+  P+EFW+T GE
Sbjct: 13 GSEKKKKQYEHVKRDLNPEEFWETIGE 39


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.317    0.133    0.421 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,768,635
Number of Sequences: 539616
Number of extensions: 2140142
Number of successful extensions: 4726
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 4721
Number of HSP's gapped (non-prelim): 19
length of query: 122
length of database: 191,569,459
effective HSP length: 89
effective length of query: 33
effective length of database: 143,543,635
effective search space: 4736939955
effective search space used: 4736939955
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)