Query 033299
Match_columns 122
No_of_seqs 110 out of 2091
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 12:12:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033299.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/033299hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG4221 Short-chain alcohol de 99.9 2.4E-23 5.1E-28 138.9 11.8 100 9-111 2-101 (246)
2 COG0300 DltE Short-chain dehyd 99.9 1.6E-22 3.5E-27 137.6 12.9 102 10-112 3-105 (265)
3 KOG1205 Predicted dehydrogenas 99.9 4.4E-23 9.5E-28 141.3 9.7 98 7-105 6-105 (282)
4 KOG1201 Hydroxysteroid 17-beta 99.9 1.1E-20 2.3E-25 129.3 11.8 101 9-111 34-134 (300)
5 PRK05876 short chain dehydroge 99.9 2.9E-20 6.2E-25 128.2 13.5 99 9-108 2-100 (275)
6 PRK05867 short chain dehydroge 99.9 3.5E-20 7.7E-25 126.0 13.4 98 9-107 5-102 (253)
7 PRK06139 short chain dehydroge 99.8 4E-20 8.7E-25 130.5 13.5 99 9-108 3-101 (330)
8 PRK07478 short chain dehydroge 99.8 5.6E-20 1.2E-24 125.0 13.7 95 8-103 1-95 (254)
9 COG3967 DltE Short-chain dehyd 99.8 1E-20 2.2E-25 123.3 9.4 95 9-108 1-95 (245)
10 PRK08862 short chain dehydroge 99.8 7.6E-20 1.7E-24 123.1 13.3 94 9-103 1-95 (227)
11 PRK06720 hypothetical protein; 99.8 1.5E-19 3.2E-24 116.8 13.4 98 9-107 12-109 (169)
12 PRK07791 short chain dehydroge 99.8 1.2E-19 2.7E-24 125.7 13.2 96 10-106 3-107 (286)
13 PRK06114 short chain dehydroge 99.8 1.6E-19 3.5E-24 122.9 13.5 101 6-107 1-102 (254)
14 KOG0725 Reductases with broad 99.8 6.2E-20 1.3E-24 126.3 11.5 99 8-106 3-104 (270)
15 PRK12481 2-deoxy-D-gluconate 3 99.8 1.2E-19 2.6E-24 123.5 12.4 96 9-107 4-99 (251)
16 PRK07063 short chain dehydroge 99.8 2.1E-19 4.6E-24 122.6 13.6 95 10-105 4-100 (260)
17 PRK07523 gluconate 5-dehydroge 99.8 2.4E-19 5.2E-24 122.0 13.7 99 8-107 5-103 (255)
18 PRK05854 short chain dehydroge 99.8 2E-19 4.3E-24 126.1 13.6 96 8-104 9-106 (313)
19 PRK06194 hypothetical protein; 99.8 2E-19 4.4E-24 124.2 13.5 97 10-107 3-99 (287)
20 PRK08589 short chain dehydroge 99.8 1.5E-19 3.4E-24 124.2 12.8 92 10-103 3-94 (272)
21 KOG1208 Dehydrogenases with di 99.8 2.2E-19 4.7E-24 125.7 13.1 97 9-106 31-129 (314)
22 PF00106 adh_short: short chai 99.8 2.2E-19 4.7E-24 115.0 12.0 96 14-110 1-99 (167)
23 PRK07109 short chain dehydroge 99.8 2.9E-19 6.4E-24 126.3 13.7 98 9-107 4-101 (334)
24 PRK08303 short chain dehydroge 99.8 2.2E-19 4.7E-24 125.6 12.9 93 8-101 3-106 (305)
25 PRK08085 gluconate 5-dehydroge 99.8 3.2E-19 7E-24 121.3 13.5 98 8-106 4-101 (254)
26 PRK07062 short chain dehydroge 99.8 3.3E-19 7.1E-24 121.9 13.5 98 9-107 4-103 (265)
27 PRK06935 2-deoxy-D-gluconate 3 99.8 3.6E-19 7.7E-24 121.4 13.1 98 7-106 9-106 (258)
28 PRK08339 short chain dehydroge 99.8 3.1E-19 6.7E-24 122.3 12.7 95 9-105 4-99 (263)
29 PRK08277 D-mannonate oxidoredu 99.8 5.1E-19 1.1E-23 121.8 13.7 99 5-104 2-100 (278)
30 PRK07097 gluconate 5-dehydroge 99.8 5.2E-19 1.1E-23 121.0 13.6 99 8-107 5-103 (265)
31 PRK05872 short chain dehydroge 99.8 4.4E-19 9.6E-24 123.4 13.3 98 8-107 4-101 (296)
32 PRK06124 gluconate 5-dehydroge 99.8 7.5E-19 1.6E-23 119.5 13.8 100 8-108 6-105 (256)
33 PRK05866 short chain dehydroge 99.8 8.9E-19 1.9E-23 121.8 14.1 98 9-107 36-133 (293)
34 PRK07576 short chain dehydroge 99.8 9.8E-19 2.1E-23 119.8 13.5 97 8-105 4-100 (264)
35 PRK08278 short chain dehydroge 99.8 9.1E-19 2E-23 120.5 13.0 98 9-107 2-106 (273)
36 PRK06079 enoyl-(acyl carrier p 99.8 7.9E-19 1.7E-23 119.6 12.2 91 10-104 4-96 (252)
37 PRK07814 short chain dehydroge 99.8 1.4E-18 3.1E-23 118.8 13.5 97 10-107 7-103 (263)
38 PRK07792 fabG 3-ketoacyl-(acyl 99.8 1.4E-18 3E-23 121.5 13.6 98 7-106 6-104 (306)
39 PRK07984 enoyl-(acyl carrier p 99.8 1.1E-18 2.3E-23 119.8 12.7 92 11-104 4-97 (262)
40 PRK08415 enoyl-(acyl carrier p 99.8 1.3E-18 2.7E-23 120.1 13.0 92 9-103 1-95 (274)
41 PRK06172 short chain dehydroge 99.8 1.3E-18 2.9E-23 118.1 12.8 95 9-104 3-97 (253)
42 PRK08643 acetoin reductase; Va 99.8 1.7E-18 3.7E-23 117.8 13.3 93 13-106 2-94 (256)
43 PRK08690 enoyl-(acyl carrier p 99.8 1.4E-18 2.9E-23 119.0 12.8 93 10-104 3-97 (261)
44 PRK06197 short chain dehydroge 99.8 1.8E-18 4E-23 120.7 13.6 97 7-104 10-108 (306)
45 PRK13394 3-hydroxybutyrate deh 99.8 2E-18 4.4E-23 117.5 13.5 96 10-106 4-99 (262)
46 PRK08265 short chain dehydroge 99.8 2E-18 4.3E-23 118.1 13.4 92 9-104 2-93 (261)
47 PRK07453 protochlorophyllide o 99.8 1.7E-18 3.8E-23 121.6 13.3 94 9-103 2-95 (322)
48 PRK07370 enoyl-(acyl carrier p 99.8 9.3E-19 2E-23 119.6 11.6 94 9-103 2-99 (258)
49 PRK07890 short chain dehydroge 99.8 2.4E-18 5.1E-23 117.0 13.4 94 10-104 2-95 (258)
50 PRK07035 short chain dehydroge 99.8 2.9E-18 6.3E-23 116.4 13.8 95 8-103 3-97 (252)
51 PRK06138 short chain dehydroge 99.8 2.9E-18 6.3E-23 116.2 13.2 96 9-106 1-96 (252)
52 PRK07533 enoyl-(acyl carrier p 99.8 2.1E-18 4.6E-23 117.8 12.6 94 8-103 5-100 (258)
53 PRK09242 tropinone reductase; 99.8 3.3E-18 7.1E-23 116.5 13.4 97 8-105 4-102 (257)
54 KOG4169 15-hydroxyprostaglandi 99.8 8.6E-19 1.9E-23 115.9 10.1 97 9-107 1-99 (261)
55 PRK07774 short chain dehydroge 99.8 3.5E-18 7.7E-23 115.7 13.5 95 8-103 1-95 (250)
56 PRK07825 short chain dehydroge 99.8 2.1E-18 4.5E-23 118.5 12.5 94 10-108 2-95 (273)
57 PRK08416 7-alpha-hydroxysteroi 99.8 2.6E-18 5.6E-23 117.4 12.9 94 9-103 4-99 (260)
58 PRK08628 short chain dehydroge 99.8 3.1E-18 6.7E-23 116.6 12.8 94 9-104 3-96 (258)
59 PRK07454 short chain dehydroge 99.8 5E-18 1.1E-22 114.6 13.5 94 12-106 5-98 (241)
60 PRK06505 enoyl-(acyl carrier p 99.8 2.5E-18 5.5E-23 118.4 12.2 91 11-103 5-97 (271)
61 PRK08226 short chain dehydroge 99.8 4.4E-18 9.6E-23 116.1 13.1 96 9-106 2-97 (263)
62 PRK06200 2,3-dihydroxy-2,3-dih 99.8 3.9E-18 8.5E-23 116.5 12.8 91 9-103 2-92 (263)
63 PRK08213 gluconate 5-dehydroge 99.8 5.8E-18 1.3E-22 115.4 13.6 97 8-105 7-103 (259)
64 PRK12939 short chain dehydroge 99.8 6.4E-18 1.4E-22 114.3 13.7 96 10-106 4-99 (250)
65 PRK05599 hypothetical protein; 99.8 3.7E-18 8E-23 115.9 12.5 90 14-105 1-91 (246)
66 PRK07677 short chain dehydroge 99.8 3.9E-18 8.5E-23 115.9 12.5 91 13-104 1-91 (252)
67 PRK08594 enoyl-(acyl carrier p 99.8 3.6E-18 7.9E-23 116.7 12.3 92 9-103 3-99 (257)
68 TIGR03325 BphB_TodD cis-2,3-di 99.8 4.8E-18 1E-22 116.1 12.9 90 10-103 2-91 (262)
69 PRK06949 short chain dehydroge 99.8 7.4E-18 1.6E-22 114.6 13.8 98 7-105 3-100 (258)
70 PRK07067 sorbitol dehydrogenas 99.8 5.2E-18 1.1E-22 115.5 13.0 94 9-106 2-95 (257)
71 PRK08993 2-deoxy-D-gluconate 3 99.8 6.4E-18 1.4E-22 115.0 13.1 95 9-106 6-100 (253)
72 PRK08063 enoyl-(acyl carrier p 99.8 6.8E-18 1.5E-22 114.3 13.1 96 11-107 2-98 (250)
73 TIGR01832 kduD 2-deoxy-D-gluco 99.8 6.6E-18 1.4E-22 114.3 13.0 94 10-106 2-95 (248)
74 PRK07666 fabG 3-ketoacyl-(acyl 99.8 8.2E-18 1.8E-22 113.4 13.4 95 10-105 4-98 (239)
75 PRK08251 short chain dehydroge 99.8 7.6E-18 1.6E-22 114.0 13.2 93 13-106 2-96 (248)
76 PRK12429 3-hydroxybutyrate deh 99.8 8.4E-18 1.8E-22 114.2 13.4 96 11-107 2-97 (258)
77 PRK07889 enoyl-(acyl carrier p 99.8 3E-18 6.6E-23 117.0 11.2 91 10-104 4-98 (256)
78 PRK06603 enoyl-(acyl carrier p 99.8 6.2E-18 1.3E-22 115.7 12.7 92 10-103 5-98 (260)
79 PRK06113 7-alpha-hydroxysteroi 99.8 1.3E-17 2.7E-22 113.6 14.1 96 9-105 7-102 (255)
80 PLN02253 xanthoxin dehydrogena 99.8 7.7E-18 1.7E-22 116.0 13.1 93 9-103 14-106 (280)
81 PRK12823 benD 1,6-dihydroxycyc 99.8 6.9E-18 1.5E-22 115.0 12.5 91 10-102 5-95 (260)
82 TIGR01289 LPOR light-dependent 99.8 8.4E-18 1.8E-22 118.0 13.2 91 12-103 2-93 (314)
83 PRK09072 short chain dehydroge 99.8 1E-17 2.3E-22 114.4 13.1 95 9-106 1-95 (263)
84 PRK06128 oxidoreductase; Provi 99.8 7.5E-18 1.6E-22 117.4 12.5 94 9-103 51-146 (300)
85 PRK08936 glucose-1-dehydrogena 99.8 1.4E-17 3E-22 113.7 13.6 97 10-107 4-101 (261)
86 PRK07024 short chain dehydroge 99.8 9E-18 2E-22 114.5 12.6 90 13-104 2-91 (257)
87 PRK12743 oxidoreductase; Provi 99.8 1.2E-17 2.7E-22 113.7 13.1 93 12-105 1-94 (256)
88 PRK08340 glucose-1-dehydrogena 99.8 1.1E-17 2.5E-22 114.1 12.9 87 15-103 2-88 (259)
89 PRK07856 short chain dehydroge 99.8 7.7E-18 1.7E-22 114.5 12.0 89 9-106 2-90 (252)
90 PRK05717 oxidoreductase; Valid 99.8 1.3E-17 2.8E-22 113.6 13.1 92 9-104 6-97 (255)
91 PRK06500 short chain dehydroge 99.8 1.5E-17 3.1E-22 112.5 13.0 93 10-106 3-95 (249)
92 PRK06398 aldose dehydrogenase; 99.8 3.6E-18 7.8E-23 116.7 10.1 87 9-107 2-88 (258)
93 PRK09134 short chain dehydroge 99.8 1.9E-17 4.2E-22 112.8 13.6 95 10-105 6-101 (258)
94 PRK07231 fabG 3-ketoacyl-(acyl 99.8 2.1E-17 4.6E-22 111.8 13.5 92 10-103 2-93 (251)
95 PRK08159 enoyl-(acyl carrier p 99.8 1.3E-17 2.9E-22 114.8 12.6 92 10-103 7-100 (272)
96 PRK05650 short chain dehydroge 99.8 1.7E-17 3.7E-22 113.8 12.9 95 14-109 1-95 (270)
97 PRK05855 short chain dehydroge 99.8 1.4E-17 3E-22 124.2 13.3 99 9-108 311-409 (582)
98 KOG1200 Mitochondrial/plastidi 99.8 4.5E-18 9.7E-23 110.4 9.2 103 9-113 10-112 (256)
99 PRK06196 oxidoreductase; Provi 99.8 1.1E-17 2.4E-22 117.3 11.9 90 9-103 22-111 (315)
100 PRK07775 short chain dehydroge 99.8 3E-17 6.4E-22 113.0 13.8 97 9-106 6-102 (274)
101 PRK12938 acetyacetyl-CoA reduc 99.8 2.3E-17 4.9E-22 111.6 13.0 94 11-105 1-95 (246)
102 PRK12826 3-ketoacyl-(acyl-carr 99.8 2.9E-17 6.3E-22 111.0 13.5 95 11-106 4-98 (251)
103 PRK12935 acetoacetyl-CoA reduc 99.8 2.9E-17 6.3E-22 111.1 13.2 96 10-106 3-99 (247)
104 PRK12937 short chain dehydroge 99.8 3.4E-17 7.4E-22 110.5 13.4 95 10-105 2-97 (245)
105 PRK12748 3-ketoacyl-(acyl-carr 99.8 2.7E-17 5.9E-22 112.0 13.0 97 10-107 2-111 (256)
106 PRK06701 short chain dehydroge 99.8 3.3E-17 7.2E-22 113.8 13.6 95 8-103 41-136 (290)
107 PRK12384 sorbitol-6-phosphate 99.8 2.9E-17 6.3E-22 111.9 13.1 96 13-109 2-99 (259)
108 TIGR03206 benzo_BadH 2-hydroxy 99.8 3.2E-17 7E-22 110.9 13.3 95 11-106 1-95 (250)
109 TIGR02415 23BDH acetoin reduct 99.8 3E-17 6.5E-22 111.4 13.1 92 14-106 1-92 (254)
110 PRK12859 3-ketoacyl-(acyl-carr 99.8 3.6E-17 7.8E-22 111.6 13.4 98 9-107 2-112 (256)
111 PRK08217 fabG 3-ketoacyl-(acyl 99.8 4.7E-17 1E-21 110.1 13.7 94 10-104 2-95 (253)
112 PRK06997 enoyl-(acyl carrier p 99.8 2.3E-17 5E-22 112.9 12.2 93 10-104 3-97 (260)
113 PRK12744 short chain dehydroge 99.8 3.4E-17 7.4E-22 111.6 13.0 97 9-106 4-104 (257)
114 PRK12936 3-ketoacyl-(acyl-carr 99.8 4.1E-17 8.9E-22 110.0 13.1 93 9-105 2-94 (245)
115 PRK07831 short chain dehydroge 99.8 4.8E-17 1E-21 111.1 13.3 97 10-107 14-113 (262)
116 PRK07326 short chain dehydroge 99.8 5.4E-17 1.2E-21 109.1 13.4 96 9-106 2-97 (237)
117 PRK06198 short chain dehydroge 99.8 4.6E-17 9.9E-22 110.9 13.1 96 10-106 3-99 (260)
118 PRK09186 flagellin modificatio 99.8 3.9E-17 8.4E-22 110.9 12.7 91 11-102 2-94 (256)
119 PRK05653 fabG 3-ketoacyl-(acyl 99.8 5.4E-17 1.2E-21 109.2 13.2 95 10-105 2-96 (246)
120 PRK12746 short chain dehydroge 99.7 5.5E-17 1.2E-21 110.2 13.2 98 10-107 3-106 (254)
121 PRK05565 fabG 3-ketoacyl-(acyl 99.7 6.6E-17 1.4E-21 109.0 13.2 95 10-105 2-97 (247)
122 PRK07985 oxidoreductase; Provi 99.7 4.6E-17 9.9E-22 113.3 12.7 92 10-102 46-139 (294)
123 PRK06077 fabG 3-ketoacyl-(acyl 99.7 9.8E-17 2.1E-21 108.7 13.6 99 8-107 1-100 (252)
124 PRK06914 short chain dehydroge 99.7 5.7E-17 1.2E-21 111.6 12.5 93 12-106 2-96 (280)
125 PRK06940 short chain dehydroge 99.7 6.6E-17 1.4E-21 111.5 12.7 88 12-103 1-88 (275)
126 PRK07806 short chain dehydroge 99.7 8.9E-17 1.9E-21 108.8 13.2 93 10-103 3-96 (248)
127 PRK06182 short chain dehydroge 99.7 4.3E-17 9.4E-22 112.0 11.7 89 12-107 2-90 (273)
128 PRK06841 short chain dehydroge 99.7 1.1E-16 2.4E-21 108.7 13.5 95 9-107 11-105 (255)
129 PRK12747 short chain dehydroge 99.7 9.5E-17 2.1E-21 109.0 12.9 96 11-106 2-103 (252)
130 PRK06463 fabG 3-ketoacyl-(acyl 99.7 6.3E-17 1.4E-21 110.1 12.0 91 10-106 4-94 (255)
131 PRK12827 short chain dehydroge 99.7 1.2E-16 2.6E-21 107.9 13.1 96 10-106 3-102 (249)
132 PRK05875 short chain dehydroge 99.7 1.2E-16 2.6E-21 109.9 13.3 93 10-103 4-98 (276)
133 PRK06123 short chain dehydroge 99.7 1.4E-16 2.9E-21 107.8 13.3 91 13-104 2-93 (248)
134 PRK07201 short chain dehydroge 99.7 9.8E-17 2.1E-21 121.7 13.8 94 10-104 368-461 (657)
135 PRK06181 short chain dehydroge 99.7 1.4E-16 3E-21 108.7 13.3 94 13-107 1-94 (263)
136 PRK06125 short chain dehydroge 99.7 1.1E-16 2.5E-21 109.1 12.8 94 9-107 3-97 (259)
137 PRK08267 short chain dehydroge 99.7 9.7E-17 2.1E-21 109.4 12.4 91 14-107 2-93 (260)
138 PRK09135 pteridine reductase; 99.7 1.9E-16 4.2E-21 106.9 13.4 95 10-105 3-99 (249)
139 PRK12828 short chain dehydroge 99.7 1.4E-16 3E-21 106.9 12.6 94 8-104 2-95 (239)
140 PRK06947 glucose-1-dehydrogena 99.7 1.9E-16 4.2E-21 107.2 13.3 91 13-104 2-93 (248)
141 PRK05993 short chain dehydroge 99.7 8.7E-17 1.9E-21 110.9 11.7 90 12-107 3-92 (277)
142 PRK06180 short chain dehydroge 99.7 1.3E-16 2.9E-21 109.9 12.5 92 12-107 3-94 (277)
143 PRK08263 short chain dehydroge 99.7 1.4E-16 3E-21 109.7 12.5 92 12-107 2-93 (275)
144 PRK06484 short chain dehydroge 99.7 8.9E-17 1.9E-21 119.2 12.2 90 10-103 266-355 (520)
145 PRK07904 short chain dehydroge 99.7 1.4E-16 3E-21 108.7 12.2 91 12-104 7-100 (253)
146 TIGR01963 PHB_DH 3-hydroxybuty 99.7 2E-16 4.3E-21 107.2 12.8 92 13-105 1-92 (255)
147 PRK06484 short chain dehydroge 99.7 1.2E-16 2.5E-21 118.6 12.6 89 10-102 2-90 (520)
148 PRK06483 dihydromonapterin red 99.7 1.1E-16 2.5E-21 107.7 11.2 87 12-104 1-87 (236)
149 PRK07832 short chain dehydroge 99.7 1.8E-16 3.8E-21 109.0 12.3 92 14-106 1-93 (272)
150 PRK05557 fabG 3-ketoacyl-(acyl 99.7 3E-16 6.5E-21 105.7 13.2 95 10-105 2-97 (248)
151 PRK12745 3-ketoacyl-(acyl-carr 99.7 3.1E-16 6.6E-21 106.5 13.2 90 13-103 2-92 (256)
152 TIGR02632 RhaD_aldol-ADH rhamn 99.7 1.6E-16 3.4E-21 121.2 13.0 98 9-107 410-509 (676)
153 PRK06171 sorbitol-6-phosphate 99.7 1.1E-16 2.3E-21 109.6 10.9 87 8-104 4-90 (266)
154 TIGR01829 AcAcCoA_reduct aceto 99.7 3.2E-16 6.9E-21 105.5 12.9 91 14-105 1-92 (242)
155 PRK06523 short chain dehydroge 99.7 2.1E-16 4.5E-21 107.8 11.7 84 9-102 5-88 (260)
156 PRK06482 short chain dehydroge 99.7 3E-16 6.5E-21 107.9 12.5 90 13-106 2-91 (276)
157 PLN02730 enoyl-[acyl-carrier-p 99.7 1E-16 2.2E-21 112.0 10.2 92 9-102 5-131 (303)
158 PLN00015 protochlorophyllide r 99.7 1.7E-16 3.7E-21 111.0 11.3 86 17-103 1-87 (308)
159 PRK07074 short chain dehydroge 99.7 4.3E-16 9.3E-21 106.0 12.9 91 13-106 2-92 (257)
160 PRK09730 putative NAD(P)-bindi 99.7 4.8E-16 1E-20 104.9 13.1 89 14-103 2-91 (247)
161 TIGR02685 pter_reduc_Leis pter 99.7 3.3E-16 7.2E-21 107.4 12.2 93 14-107 2-100 (267)
162 PRK08220 2,3-dihydroxybenzoate 99.7 3.4E-16 7.3E-21 106.1 11.9 88 9-106 4-91 (252)
163 PRK12829 short chain dehydroge 99.7 4.8E-16 1E-20 105.9 12.7 91 9-102 7-97 (264)
164 PRK06179 short chain dehydroge 99.7 1.6E-16 3.5E-21 108.9 10.4 87 12-107 3-89 (270)
165 PRK06057 short chain dehydroge 99.7 4.7E-16 1E-20 105.9 12.2 88 10-103 4-91 (255)
166 PRK12825 fabG 3-ketoacyl-(acyl 99.7 8E-16 1.7E-20 103.6 13.1 95 11-106 4-99 (249)
167 PRK08945 putative oxoacyl-(acy 99.7 9.9E-16 2.2E-20 103.7 13.4 100 4-104 3-105 (247)
168 PRK08642 fabG 3-ketoacyl-(acyl 99.7 6.3E-16 1.4E-20 104.8 12.4 90 9-102 1-92 (253)
169 PRK05693 short chain dehydroge 99.7 4.1E-16 8.8E-21 107.2 11.4 86 14-106 2-87 (274)
170 PRK12824 acetoacetyl-CoA reduc 99.7 1.1E-15 2.4E-20 103.1 13.0 93 13-106 2-95 (245)
171 TIGR01831 fabG_rel 3-oxoacyl-( 99.7 6.5E-16 1.4E-20 104.1 11.7 90 16-106 1-91 (239)
172 KOG1014 17 beta-hydroxysteroid 99.7 5.2E-16 1.1E-20 106.8 11.0 92 12-105 48-140 (312)
173 PRK05786 fabG 3-ketoacyl-(acyl 99.7 1.8E-15 3.8E-20 101.8 13.4 93 10-104 2-94 (238)
174 PRK08703 short chain dehydroge 99.7 1.3E-15 2.8E-20 102.8 12.7 95 9-103 2-99 (239)
175 PRK07069 short chain dehydroge 99.7 1.1E-15 2.4E-20 103.4 12.4 91 16-107 2-95 (251)
176 PF08659 KR: KR domain; Inter 99.7 4.3E-16 9.3E-21 101.6 9.4 96 15-111 2-101 (181)
177 PRK10538 malonic semialdehyde 99.7 1.6E-15 3.6E-20 102.8 12.5 85 14-102 1-85 (248)
178 TIGR01500 sepiapter_red sepiap 99.7 2.2E-15 4.8E-20 102.7 12.5 88 15-103 2-99 (256)
179 COG1028 FabG Dehydrogenases wi 99.7 3.6E-15 7.8E-20 101.1 13.2 94 10-104 2-99 (251)
180 PLN02780 ketoreductase/ oxidor 99.7 1.4E-15 3E-20 107.1 11.4 91 11-103 51-144 (320)
181 PRK08324 short chain dehydroge 99.7 2.2E-15 4.7E-20 115.1 13.1 96 10-107 419-514 (681)
182 PRK08264 short chain dehydroge 99.7 2.5E-15 5.3E-20 101.2 10.9 83 8-102 1-84 (238)
183 PRK07102 short chain dehydroge 99.7 4.4E-15 9.5E-20 100.4 12.2 89 14-106 2-91 (243)
184 TIGR01830 3oxo_ACP_reduc 3-oxo 99.7 4E-15 8.8E-20 99.9 11.9 89 16-105 1-90 (239)
185 PRK09291 short chain dehydroge 99.6 4.4E-15 9.6E-20 100.9 11.7 87 13-106 2-88 (257)
186 PRK07060 short chain dehydroge 99.6 6.7E-15 1.5E-19 99.3 12.0 89 7-105 3-91 (245)
187 KOG1199 Short-chain alcohol de 99.6 2.7E-15 5.8E-20 96.1 9.3 89 10-102 6-94 (260)
188 KOG1209 1-Acyl dihydroxyaceton 99.6 2.1E-15 4.6E-20 99.3 8.7 93 13-111 7-101 (289)
189 PRK12742 oxidoreductase; Provi 99.6 9.9E-15 2.1E-19 98.1 11.7 86 10-105 3-89 (237)
190 PRK13656 trans-2-enoyl-CoA red 99.6 1.2E-14 2.7E-19 103.6 12.1 92 11-104 39-144 (398)
191 KOG1611 Predicted short chain- 99.6 6.9E-15 1.5E-19 97.4 9.4 99 13-111 3-104 (249)
192 COG0623 FabI Enoyl-[acyl-carri 99.6 1.8E-14 4E-19 95.6 11.3 102 9-112 2-105 (259)
193 PRK07041 short chain dehydroge 99.6 1.2E-14 2.6E-19 97.4 10.7 84 17-106 1-84 (230)
194 KOG1610 Corticosteroid 11-beta 99.6 4.9E-15 1.1E-19 102.2 8.8 95 9-105 25-120 (322)
195 PRK08261 fabG 3-ketoacyl-(acyl 99.6 1.4E-14 3.1E-19 105.9 11.8 92 10-107 207-300 (450)
196 smart00822 PKS_KR This enzymat 99.6 2.5E-14 5.4E-19 91.4 10.5 91 14-105 1-95 (180)
197 PRK06300 enoyl-(acyl carrier p 99.6 5.7E-15 1.2E-19 103.2 7.2 94 8-103 3-131 (299)
198 KOG1207 Diacetyl reductase/L-x 99.6 5.1E-15 1.1E-19 94.9 6.1 95 10-112 4-98 (245)
199 PRK12367 short chain dehydroge 99.6 1.1E-14 2.3E-19 99.2 8.1 83 9-104 10-92 (245)
200 PF13561 adh_short_C2: Enoyl-( 99.6 3.3E-14 7.3E-19 96.1 10.0 83 20-104 1-86 (241)
201 PRK07424 bifunctional sterol d 99.6 7.3E-14 1.6E-18 101.0 11.4 85 9-104 174-258 (406)
202 PRK08017 oxidoreductase; Provi 99.6 1E-13 2.2E-18 94.1 11.5 87 13-105 2-88 (256)
203 PRK07023 short chain dehydroge 99.6 5.1E-14 1.1E-18 95.2 9.8 85 15-104 3-90 (243)
204 PRK06101 short chain dehydroge 99.5 6.1E-14 1.3E-18 94.8 9.9 81 14-102 2-82 (240)
205 KOG1478 3-keto sterol reductas 99.5 1.3E-13 2.8E-18 93.0 10.8 93 12-105 2-103 (341)
206 PRK07577 short chain dehydroge 99.5 1.1E-13 2.3E-18 93.0 10.5 82 12-106 2-83 (234)
207 PRK06924 short chain dehydroge 99.5 1E-13 2.2E-18 94.0 10.3 86 14-103 2-92 (251)
208 PRK08177 short chain dehydroge 99.5 1.1E-13 2.4E-18 92.7 10.1 82 14-103 2-83 (225)
209 TIGR02813 omega_3_PfaA polyket 99.5 1.6E-13 3.4E-18 115.3 12.8 98 12-111 1996-2141(2582)
210 PRK05884 short chain dehydroge 99.5 1.7E-13 3.6E-18 92.0 10.5 79 15-102 2-80 (223)
211 PRK08219 short chain dehydroge 99.5 2E-13 4.4E-18 91.0 10.6 83 13-105 3-85 (227)
212 TIGR02622 CDP_4_6_dhtase CDP-g 99.5 9.9E-14 2.2E-18 98.5 9.5 86 11-103 2-87 (349)
213 PRK06550 fabG 3-ketoacyl-(acyl 99.5 1.3E-13 2.9E-18 92.6 8.8 78 10-103 2-79 (235)
214 PLN03209 translocon at the inn 99.5 4.7E-13 1E-17 99.7 12.2 86 10-103 77-171 (576)
215 TIGR03589 PseB UDP-N-acetylglu 99.5 1.7E-13 3.6E-18 96.6 9.2 83 11-103 2-86 (324)
216 PLN02989 cinnamyl-alcohol dehy 99.5 1.6E-13 3.5E-18 96.4 9.0 84 12-103 4-89 (325)
217 KOG1502 Flavonol reductase/cin 99.5 2.8E-13 6E-18 94.7 9.8 88 12-107 5-94 (327)
218 COG1086 Predicted nucleoside-d 99.5 2.1E-13 4.5E-18 100.4 9.5 105 9-119 246-353 (588)
219 KOG1210 Predicted 3-ketosphing 99.5 4E-13 8.6E-18 92.8 9.8 97 14-111 34-132 (331)
220 PLN02653 GDP-mannose 4,6-dehyd 99.5 2.5E-13 5.3E-18 96.1 8.3 89 10-104 3-96 (340)
221 PRK07578 short chain dehydroge 99.5 4.9E-13 1.1E-17 88.0 8.5 70 15-107 2-71 (199)
222 PLN02896 cinnamyl-alcohol dehy 99.5 1.3E-12 2.9E-17 92.9 10.9 85 11-104 8-92 (353)
223 PLN02240 UDP-glucose 4-epimera 99.4 8.6E-13 1.9E-17 93.5 9.8 89 9-103 1-93 (352)
224 PRK06953 short chain dehydroge 99.4 2E-12 4.4E-17 86.4 10.3 81 14-103 2-82 (222)
225 TIGR01472 gmd GDP-mannose 4,6- 99.4 9.3E-13 2E-17 93.3 8.9 85 14-104 1-91 (343)
226 PRK09009 C factor cell-cell si 99.4 2.1E-12 4.5E-17 86.8 9.3 78 14-104 1-80 (235)
227 PLN02214 cinnamoyl-CoA reducta 99.4 4.9E-12 1.1E-16 89.8 11.6 87 9-103 6-93 (342)
228 PLN02986 cinnamyl-alcohol dehy 99.4 3E-12 6.5E-17 89.9 10.4 85 11-103 3-89 (322)
229 COG1087 GalE UDP-glucose 4-epi 99.4 1.7E-12 3.7E-17 89.4 8.1 95 14-119 1-95 (329)
230 PF02719 Polysacc_synt_2: Poly 99.4 1.9E-13 4.1E-18 94.5 3.5 96 16-117 1-103 (293)
231 PRK08309 short chain dehydroge 99.4 1.5E-11 3.2E-16 80.1 12.0 87 15-104 2-88 (177)
232 PRK15181 Vi polysaccharide bio 99.4 6.2E-12 1.3E-16 89.4 9.1 88 9-104 11-103 (348)
233 PLN02662 cinnamyl-alcohol dehy 99.4 9.9E-12 2.1E-16 87.1 9.9 83 12-103 3-88 (322)
234 PLN02572 UDP-sulfoquinovose sy 99.3 2.3E-11 5E-16 89.2 11.6 89 9-103 43-148 (442)
235 PLN00198 anthocyanidin reducta 99.3 2.2E-11 4.7E-16 86.2 10.5 82 12-102 8-91 (338)
236 PLN02650 dihydroflavonol-4-red 99.3 2.7E-11 5.9E-16 86.1 10.9 84 12-103 4-89 (351)
237 KOG1371 UDP-glucose 4-epimeras 99.3 2.7E-11 5.9E-16 84.2 10.0 100 13-118 2-104 (343)
238 PLN02657 3,8-divinyl protochlo 99.3 2.9E-11 6.4E-16 87.3 10.4 88 11-102 58-147 (390)
239 PRK10675 UDP-galactose-4-epime 99.3 1.6E-11 3.5E-16 86.6 8.7 84 15-104 2-86 (338)
240 PRK10217 dTDP-glucose 4,6-dehy 99.3 1.4E-11 3.1E-16 87.5 8.1 83 14-104 2-87 (355)
241 TIGR01179 galE UDP-glucose-4-e 99.3 3E-11 6.4E-16 84.4 9.5 83 15-104 1-83 (328)
242 PLN02583 cinnamoyl-CoA reducta 99.3 7.1E-11 1.5E-15 82.4 11.3 84 11-102 4-89 (297)
243 PLN02427 UDP-apiose/xylose syn 99.3 1.6E-11 3.4E-16 88.4 7.8 86 11-104 12-99 (386)
244 PLN02686 cinnamoyl-CoA reducta 99.3 1.3E-10 2.9E-15 83.3 11.2 85 10-103 50-140 (367)
245 PRK10084 dTDP-glucose 4,6 dehy 99.2 9.8E-11 2.1E-15 83.1 10.0 82 15-104 2-86 (352)
246 TIGR01181 dTDP_gluc_dehyt dTDP 99.2 1.1E-10 2.4E-15 81.2 8.2 83 15-104 1-86 (317)
247 TIGR02114 coaB_strep phosphopa 99.2 4.9E-11 1.1E-15 80.4 6.0 79 17-108 18-97 (227)
248 PF13460 NAD_binding_10: NADH( 99.2 5.9E-10 1.3E-14 72.3 10.2 73 16-104 1-73 (183)
249 PLN00141 Tic62-NAD(P)-related 99.2 5.1E-10 1.1E-14 76.2 10.3 82 10-102 14-96 (251)
250 PF01370 Epimerase: NAD depend 99.1 7.6E-10 1.7E-14 74.1 9.2 77 16-103 1-77 (236)
251 CHL00194 ycf39 Ycf39; Provisio 99.1 9.7E-10 2.1E-14 77.3 10.0 74 15-102 2-75 (317)
252 PRK08125 bifunctional UDP-gluc 99.1 5E-10 1.1E-14 85.8 8.5 82 10-104 312-395 (660)
253 PRK12548 shikimate 5-dehydroge 99.1 2.3E-09 4.9E-14 74.8 10.9 86 9-103 122-211 (289)
254 PRK11908 NAD-dependent epimera 99.1 7.8E-10 1.7E-14 78.5 8.4 78 14-104 2-81 (347)
255 PLN02260 probable rhamnose bio 99.1 8.3E-10 1.8E-14 84.6 8.7 86 11-104 4-93 (668)
256 PRK05579 bifunctional phosphop 99.1 1.8E-09 3.8E-14 78.3 9.8 82 10-106 185-282 (399)
257 TIGR03466 HpnA hopanoid-associ 99.1 7.9E-10 1.7E-14 77.4 7.9 74 15-102 2-75 (328)
258 PRK09987 dTDP-4-dehydrorhamnos 99.0 6.7E-10 1.4E-14 77.6 5.9 67 15-105 2-68 (299)
259 COG1088 RfbB dTDP-D-glucose 4, 99.0 1.8E-09 4E-14 74.6 7.3 95 14-119 1-102 (340)
260 PF01073 3Beta_HSD: 3-beta hyd 99.0 1.6E-09 3.4E-14 75.3 7.1 78 17-105 1-80 (280)
261 PLN02695 GDP-D-mannose-3',5'-e 99.0 4.6E-09 9.9E-14 75.5 9.2 81 9-103 17-97 (370)
262 TIGR01746 Thioester-redct thio 98.9 9.9E-09 2.1E-13 72.6 9.7 81 15-103 1-100 (367)
263 TIGR01214 rmlD dTDP-4-dehydror 98.9 3.1E-09 6.8E-14 73.4 6.1 61 16-103 2-62 (287)
264 PF04321 RmlD_sub_bind: RmlD s 98.9 1.1E-09 2.5E-14 76.1 3.8 70 15-111 2-71 (286)
265 COG1089 Gmd GDP-D-mannose dehy 98.9 4E-09 8.7E-14 72.5 6.1 100 12-117 1-104 (345)
266 PRK11150 rfaD ADP-L-glycero-D- 98.9 5.6E-09 1.2E-13 72.9 7.0 77 16-103 2-80 (308)
267 cd01078 NAD_bind_H4MPT_DH NADP 98.9 6.6E-08 1.4E-12 63.7 11.2 85 10-103 25-109 (194)
268 COG0451 WcaG Nucleoside-diphos 98.9 1.1E-08 2.3E-13 71.3 7.2 78 16-107 3-80 (314)
269 TIGR00521 coaBC_dfp phosphopan 98.9 1.5E-08 3.3E-13 73.2 8.2 84 10-108 182-282 (390)
270 PRK05865 hypothetical protein; 98.9 2.6E-08 5.7E-13 77.9 9.9 72 15-103 2-73 (854)
271 PLN02206 UDP-glucuronate decar 98.8 1.2E-08 2.7E-13 74.9 6.9 78 12-104 118-196 (442)
272 COG1091 RfbD dTDP-4-dehydrorha 98.8 1.5E-08 3.3E-13 70.0 6.1 75 16-118 3-77 (281)
273 PLN02166 dTDP-glucose 4,6-dehy 98.8 1.9E-08 4.2E-13 73.8 6.8 78 13-104 120-197 (436)
274 KOG1204 Predicted dehydrogenas 98.8 2.1E-09 4.6E-14 71.6 1.0 92 11-105 4-96 (253)
275 PLN02778 3,5-epimerase/4-reduc 98.7 3.7E-08 8E-13 68.9 6.6 62 13-104 9-70 (298)
276 TIGR02197 heptose_epim ADP-L-g 98.7 7.6E-08 1.6E-12 67.2 7.8 77 16-103 1-78 (314)
277 PRK07201 short chain dehydroge 98.7 1.6E-07 3.5E-12 71.8 10.1 83 15-103 2-89 (657)
278 PLN02725 GDP-4-keto-6-deoxyman 98.7 3.1E-08 6.8E-13 68.8 5.6 61 17-103 1-61 (306)
279 PRK12320 hypothetical protein; 98.7 1.5E-07 3.2E-12 72.4 9.4 71 15-103 2-72 (699)
280 TIGR03649 ergot_EASG ergot alk 98.7 4.8E-08 1.1E-12 67.6 6.1 77 16-102 2-78 (285)
281 KOG1429 dTDP-glucose 4-6-dehyd 98.7 3.8E-08 8.3E-13 67.8 5.3 97 9-119 23-119 (350)
282 KOG1430 C-3 sterol dehydrogena 98.7 1.1E-07 2.5E-12 67.8 7.6 87 12-107 3-91 (361)
283 PRK14106 murD UDP-N-acetylmura 98.7 3.5E-07 7.6E-12 67.2 10.1 81 10-106 2-83 (450)
284 PF03435 Saccharop_dh: Sacchar 98.6 4E-07 8.6E-12 65.8 9.9 76 16-102 1-78 (386)
285 PLN02996 fatty acyl-CoA reduct 98.6 5.3E-07 1.1E-11 67.2 10.5 87 10-104 8-125 (491)
286 PLN02503 fatty acyl-CoA reduct 98.6 4.5E-07 9.8E-12 68.9 9.9 86 11-104 117-232 (605)
287 PRK09620 hypothetical protein; 98.6 1E-07 2.2E-12 64.5 5.8 86 11-106 1-102 (229)
288 PF05368 NmrA: NmrA-like famil 98.6 8.5E-07 1.8E-11 59.7 10.2 76 16-103 1-76 (233)
289 PLN00016 RNA-binding protein; 98.6 2.3E-07 5.1E-12 66.8 7.2 39 11-49 50-92 (378)
290 PF07993 NAD_binding_4: Male s 98.6 2.8E-07 6E-12 62.9 7.1 81 18-106 1-102 (249)
291 COG1748 LYS9 Saccharopine dehy 98.6 7.6E-07 1.7E-11 64.2 9.4 80 14-105 2-82 (389)
292 COG3320 Putative dehydrogenase 98.5 1.3E-06 2.7E-11 62.5 9.4 82 14-103 1-99 (382)
293 KOG2733 Uncharacterized membra 98.5 7.5E-07 1.6E-11 63.2 7.8 81 15-103 7-95 (423)
294 COG0702 Predicted nucleoside-d 98.5 1.8E-06 4E-11 58.9 9.0 74 15-103 2-75 (275)
295 COG1090 Predicted nucleoside-d 98.5 4.1E-07 8.8E-12 62.5 5.5 70 16-105 1-70 (297)
296 PRK12428 3-alpha-hydroxysteroi 98.5 3.6E-07 7.7E-12 61.9 5.1 60 29-103 1-60 (241)
297 TIGR01777 yfcH conserved hypot 98.4 3.5E-07 7.5E-12 63.1 4.9 69 16-103 1-69 (292)
298 PRK06732 phosphopantothenate-- 98.4 1.8E-06 3.9E-11 58.5 8.1 78 16-106 18-96 (229)
299 PF01488 Shikimate_DH: Shikima 98.4 1.8E-06 4E-11 53.8 7.6 80 9-104 8-88 (135)
300 PLN02260 probable rhamnose bio 98.4 1.2E-06 2.6E-11 67.4 7.0 60 14-103 381-440 (668)
301 PRK14982 acyl-ACP reductase; P 98.4 7.1E-06 1.5E-10 58.5 9.8 75 10-104 152-228 (340)
302 PRK02472 murD UDP-N-acetylmura 98.3 5.9E-06 1.3E-10 60.8 7.9 84 10-108 2-85 (447)
303 TIGR03443 alpha_am_amid L-amin 98.3 1.6E-05 3.5E-10 65.5 11.1 87 13-103 971-1073(1389)
304 KOG2865 NADH:ubiquinone oxidor 98.2 7.3E-06 1.6E-10 57.0 7.1 83 10-101 58-140 (391)
305 cd01065 NAD_bind_Shikimate_DH 98.0 8.1E-05 1.8E-09 47.0 9.0 78 10-104 16-94 (155)
306 PRK00258 aroE shikimate 5-dehy 98.0 8.8E-05 1.9E-09 51.6 9.4 77 10-103 120-197 (278)
307 COG2910 Putative NADH-flavin r 98.0 5.5E-05 1.2E-09 49.4 7.5 72 15-102 2-73 (211)
308 PRK06849 hypothetical protein; 98.0 0.00021 4.6E-09 51.8 11.4 83 12-100 3-85 (389)
309 TIGR00507 aroE shikimate 5-deh 98.0 0.00014 2.9E-09 50.4 10.0 76 11-103 115-190 (270)
310 PF04127 DFP: DNA / pantothena 98.0 9.6E-05 2.1E-09 48.5 8.2 82 11-107 1-98 (185)
311 COG4982 3-oxoacyl-[acyl-carrie 97.9 0.00025 5.5E-09 54.0 10.9 97 9-105 392-507 (866)
312 KOG1202 Animal-type fatty acid 97.9 3.1E-05 6.7E-10 62.6 5.9 101 12-114 1767-1871(2376)
313 KOG0747 Putative NAD+-dependen 97.8 2.3E-05 4.9E-10 54.4 3.4 99 12-118 5-107 (331)
314 PRK12549 shikimate 5-dehydroge 97.7 0.001 2.2E-08 46.5 10.4 50 10-60 124-174 (284)
315 TIGR01809 Shik-DH-AROM shikima 97.7 0.00072 1.6E-08 47.2 9.6 79 11-103 123-202 (282)
316 PRK13940 glutamyl-tRNA reducta 97.7 0.00059 1.3E-08 50.1 9.4 77 9-103 177-254 (414)
317 cd01075 NAD_bind_Leu_Phe_Val_D 97.7 0.00013 2.7E-09 48.5 5.5 47 9-56 24-70 (200)
318 KOG1221 Acyl-CoA reductase [Li 97.6 0.00019 4.2E-09 53.1 6.4 93 10-106 9-121 (467)
319 cd08266 Zn_ADH_like1 Alcohol d 97.6 0.0013 2.9E-08 45.9 10.5 80 12-101 166-245 (342)
320 COG0569 TrkA K+ transport syst 97.6 0.00085 1.8E-08 45.4 9.0 74 15-101 2-76 (225)
321 KOG1372 GDP-mannose 4,6 dehydr 97.6 0.00021 4.5E-09 49.1 5.9 91 13-109 28-124 (376)
322 PRK06719 precorrin-2 dehydroge 97.6 0.00056 1.2E-08 43.8 7.4 44 1-45 1-44 (157)
323 PLN02520 bifunctional 3-dehydr 97.6 0.00028 6E-09 53.3 6.8 47 10-57 376-422 (529)
324 COG3268 Uncharacterized conser 97.6 0.00037 8E-09 49.5 6.6 77 14-103 7-83 (382)
325 cd08259 Zn_ADH5 Alcohol dehydr 97.6 0.0017 3.6E-08 45.5 10.0 76 12-102 162-237 (332)
326 COG0604 Qor NADPH:quinone redu 97.5 0.0011 2.4E-08 47.2 9.0 79 13-102 143-222 (326)
327 PRK14027 quinate/shikimate deh 97.5 0.0026 5.7E-08 44.5 10.7 81 11-103 125-206 (283)
328 cd05276 p53_inducible_oxidored 97.5 0.0019 4E-08 44.7 9.6 80 12-101 139-218 (323)
329 PRK12475 thiamine/molybdopteri 97.5 0.0028 6.1E-08 45.4 10.5 36 10-46 21-57 (338)
330 cd08253 zeta_crystallin Zeta-c 97.5 0.0015 3.3E-08 45.2 8.8 80 12-101 144-223 (325)
331 TIGR00715 precor6x_red precorr 97.4 0.0007 1.5E-08 46.7 6.8 75 15-102 2-76 (256)
332 TIGR00518 alaDH alanine dehydr 97.4 0.0028 6E-08 46.0 10.0 76 11-101 165-240 (370)
333 COG0169 AroE Shikimate 5-dehyd 97.4 0.0024 5.3E-08 44.6 9.2 81 10-105 123-204 (283)
334 cd08295 double_bond_reductase_ 97.4 0.0018 4E-08 45.8 8.8 43 12-54 151-193 (338)
335 cd01336 MDH_cytoplasmic_cytoso 97.4 0.00029 6.4E-09 50.1 4.7 79 15-104 4-91 (325)
336 TIGR02356 adenyl_thiF thiazole 97.4 0.0049 1.1E-07 41.0 10.1 37 9-46 17-54 (202)
337 TIGR02853 spore_dpaA dipicolin 97.4 0.0024 5.2E-08 44.7 8.8 42 9-51 147-188 (287)
338 cd08293 PTGR2 Prostaglandin re 97.4 0.0033 7.1E-08 44.5 9.7 42 14-55 156-198 (345)
339 PRK09496 trkA potassium transp 97.4 0.0025 5.5E-08 47.0 9.2 57 15-77 2-58 (453)
340 TIGR02825 B4_12hDH leukotriene 97.3 0.0037 8E-08 44.0 9.6 79 12-100 138-216 (325)
341 COG0373 HemA Glutamyl-tRNA red 97.3 0.0032 6.9E-08 46.2 9.0 76 9-103 174-250 (414)
342 PRK12749 quinate/shikimate deh 97.3 0.0077 1.7E-07 42.3 10.7 48 10-58 121-172 (288)
343 PLN03154 putative allyl alcoho 97.3 0.0027 5.9E-08 45.4 8.6 42 12-53 158-199 (348)
344 PLN02819 lysine-ketoglutarate 97.3 0.0026 5.7E-08 51.5 9.1 79 12-103 568-660 (1042)
345 PRK00045 hemA glutamyl-tRNA re 97.2 0.0043 9.2E-08 45.8 9.2 47 10-57 179-226 (423)
346 KOG1198 Zinc-binding oxidoredu 97.2 0.0051 1.1E-07 44.3 9.1 81 11-102 156-236 (347)
347 cd08294 leukotriene_B4_DH_like 97.2 0.0078 1.7E-07 42.2 9.8 42 12-53 143-184 (329)
348 PTZ00325 malate dehydrogenase; 97.2 0.0018 3.9E-08 46.1 6.5 81 12-104 7-89 (321)
349 cd05188 MDR Medium chain reduc 97.2 0.0053 1.2E-07 41.5 8.7 78 12-101 134-211 (271)
350 PF02254 TrkA_N: TrkA-N domain 97.2 0.0036 7.8E-08 37.5 7.0 58 16-80 1-58 (116)
351 PRK13982 bifunctional SbtC-lik 97.2 0.0057 1.2E-07 45.7 9.2 82 10-107 253-350 (475)
352 cd01080 NAD_bind_m-THF_DH_Cycl 97.1 0.0023 4.9E-08 41.5 6.3 44 9-52 40-83 (168)
353 PRK07688 thiamine/molybdopteri 97.1 0.013 2.8E-07 42.1 10.6 36 10-46 21-57 (339)
354 TIGR01035 hemA glutamyl-tRNA r 97.1 0.0061 1.3E-07 44.9 9.1 47 10-57 177-224 (417)
355 TIGR02824 quinone_pig3 putativ 97.1 0.0054 1.2E-07 42.5 8.4 80 12-101 139-218 (325)
356 cd00757 ThiF_MoeB_HesA_family 97.1 0.012 2.7E-07 39.7 9.9 34 10-44 18-52 (228)
357 PRK08762 molybdopterin biosynt 97.1 0.0086 1.9E-07 43.5 9.6 36 10-46 132-168 (376)
358 cd08268 MDR2 Medium chain dehy 97.1 0.0076 1.7E-07 41.8 9.0 80 12-101 144-223 (328)
359 PRK04308 murD UDP-N-acetylmura 97.1 0.01 2.2E-07 43.9 9.8 82 11-108 3-84 (445)
360 cd05288 PGDH Prostaglandin deh 97.1 0.01 2.2E-07 41.6 9.4 42 12-53 145-186 (329)
361 KOG1203 Predicted dehydrogenas 97.0 0.0051 1.1E-07 45.1 7.9 46 10-55 76-121 (411)
362 PLN00203 glutamyl-tRNA reducta 97.0 0.0088 1.9E-07 45.3 9.3 77 11-103 264-341 (519)
363 PRK01438 murD UDP-N-acetylmura 97.0 0.015 3.2E-07 43.4 10.5 81 10-107 13-94 (480)
364 PRK05690 molybdopterin biosynt 97.0 0.02 4.3E-07 39.3 10.2 35 10-45 29-64 (245)
365 cd05213 NAD_bind_Glutamyl_tRNA 97.0 0.0082 1.8E-07 42.5 8.5 75 11-104 176-251 (311)
366 COG1648 CysG Siroheme synthase 97.0 0.011 2.3E-07 39.7 8.6 51 4-55 3-54 (210)
367 PRK09310 aroDE bifunctional 3- 97.0 0.0039 8.5E-08 46.7 6.9 46 10-56 329-374 (477)
368 TIGR01470 cysG_Nterm siroheme 97.0 0.017 3.6E-07 38.6 9.2 40 7-47 3-42 (205)
369 PRK09424 pntA NAD(P) transhydr 96.9 0.025 5.4E-07 42.8 10.8 85 11-103 163-260 (509)
370 TIGR02355 moeB molybdopterin s 96.9 0.024 5.2E-07 38.8 9.9 35 10-45 21-56 (240)
371 PF00899 ThiF: ThiF family; I 96.9 0.026 5.6E-07 34.9 9.3 79 13-101 2-102 (135)
372 PRK08306 dipicolinate synthase 96.9 0.015 3.3E-07 40.9 9.1 40 10-50 149-188 (296)
373 PF03446 NAD_binding_2: NAD bi 96.9 0.0071 1.5E-07 38.7 6.9 87 15-103 3-98 (163)
374 PRK08644 thiamine biosynthesis 96.9 0.028 6.1E-07 37.7 9.9 36 10-46 25-61 (212)
375 PRK14192 bifunctional 5,10-met 96.9 0.0084 1.8E-07 42.0 7.6 40 9-48 155-194 (283)
376 cd08241 QOR1 Quinone oxidoredu 96.8 0.016 3.4E-07 40.1 8.8 41 12-52 139-179 (323)
377 PRK05597 molybdopterin biosynt 96.8 0.026 5.7E-07 40.7 10.0 35 10-45 25-60 (355)
378 PRK06718 precorrin-2 dehydroge 96.8 0.0034 7.3E-08 41.8 5.0 42 5-47 2-43 (202)
379 KOG1431 GDP-L-fucose synthetas 96.8 0.0068 1.5E-07 41.3 6.4 62 14-102 2-66 (315)
380 cd08292 ETR_like_2 2-enoyl thi 96.8 0.017 3.7E-07 40.3 8.8 80 12-101 139-218 (324)
381 PRK04148 hypothetical protein; 96.8 0.04 8.6E-07 34.4 9.2 54 12-73 16-69 (134)
382 TIGR01915 npdG NADPH-dependent 96.8 0.0088 1.9E-07 40.1 6.8 42 15-56 2-43 (219)
383 PRK09496 trkA potassium transp 96.8 0.013 2.8E-07 43.3 8.2 60 12-76 230-289 (453)
384 KOG4022 Dihydropteridine reduc 96.7 0.021 4.6E-07 37.0 7.9 82 13-104 3-85 (236)
385 cd08244 MDR_enoyl_red Possible 96.7 0.025 5.4E-07 39.4 9.2 80 12-101 142-221 (324)
386 PLN00106 malate dehydrogenase 96.7 0.0043 9.3E-08 44.2 5.3 79 14-104 19-99 (323)
387 COG2130 Putative NADP-dependen 96.7 0.0087 1.9E-07 42.2 6.6 81 12-102 150-230 (340)
388 PRK08223 hypothetical protein; 96.7 0.023 4.9E-07 39.9 8.6 36 9-45 23-59 (287)
389 COG1064 AdhP Zn-dependent alco 96.7 0.02 4.4E-07 41.0 8.5 40 13-53 167-206 (339)
390 PRK05600 thiamine biosynthesis 96.7 0.047 1E-06 39.7 10.3 36 10-46 38-74 (370)
391 cd05212 NAD_bind_m-THF_DH_Cycl 96.6 0.01 2.3E-07 37.3 6.1 44 9-52 24-67 (140)
392 cd08290 ETR 2-enoyl thioester 96.6 0.029 6.4E-07 39.6 9.1 36 12-47 146-181 (341)
393 cd08289 MDR_yhfp_like Yhfp put 96.6 0.028 6.1E-07 39.3 8.9 41 13-53 147-187 (326)
394 PRK12480 D-lactate dehydrogena 96.6 0.031 6.7E-07 40.0 9.1 87 10-100 143-234 (330)
395 PRK09880 L-idonate 5-dehydroge 96.6 0.039 8.5E-07 39.3 9.7 76 12-101 169-245 (343)
396 PF13241 NAD_binding_7: Putati 96.6 0.0029 6.3E-08 37.5 3.3 39 8-47 2-40 (103)
397 PF10727 Rossmann-like: Rossma 96.6 0.013 2.8E-07 36.2 6.1 92 14-108 11-113 (127)
398 PRK08655 prephenate dehydrogen 96.6 0.064 1.4E-06 39.8 10.8 39 15-53 2-40 (437)
399 PRK00066 ldh L-lactate dehydro 96.6 0.026 5.6E-07 40.1 8.4 77 11-103 4-85 (315)
400 cd01492 Aos1_SUMO Ubiquitin ac 96.6 0.042 9E-07 36.4 8.9 35 10-45 18-53 (197)
401 PF01113 DapB_N: Dihydrodipico 96.6 0.046 9.9E-07 33.5 8.5 79 15-104 2-104 (124)
402 KOG0025 Zn2+-binding dehydroge 96.6 0.016 3.5E-07 40.7 7.0 85 12-102 160-244 (354)
403 cd08250 Mgc45594_like Mgc45594 96.6 0.051 1.1E-06 38.1 9.8 78 12-100 139-216 (329)
404 cd05286 QOR2 Quinone oxidoredu 96.5 0.033 7.1E-07 38.4 8.7 41 12-52 136-176 (320)
405 PRK05479 ketol-acid reductoiso 96.5 0.034 7.5E-07 39.8 8.8 90 9-103 13-112 (330)
406 cd08291 ETR_like_1 2-enoyl thi 96.5 0.043 9.3E-07 38.6 9.3 78 14-101 145-222 (324)
407 cd05291 HicDH_like L-2-hydroxy 96.5 0.019 4.1E-07 40.5 7.5 73 15-103 2-80 (306)
408 PF00056 Ldh_1_N: lactate/mala 96.5 0.051 1.1E-06 34.1 8.7 74 15-103 2-81 (141)
409 cd08243 quinone_oxidoreductase 96.5 0.049 1.1E-06 37.8 9.5 40 12-51 142-181 (320)
410 cd08239 THR_DH_like L-threonin 96.5 0.033 7.2E-07 39.4 8.7 78 12-101 163-241 (339)
411 cd00704 MDH Malate dehydrogena 96.5 0.014 2.9E-07 41.7 6.6 75 15-104 2-89 (323)
412 cd01487 E1_ThiF_like E1_ThiF_l 96.5 0.086 1.9E-06 34.2 9.8 30 16-46 2-32 (174)
413 PRK10669 putative cation:proto 96.5 0.016 3.5E-07 44.2 7.2 57 14-77 418-474 (558)
414 TIGR02354 thiF_fam2 thiamine b 96.4 0.08 1.7E-06 35.2 9.6 37 9-46 17-54 (200)
415 cd05282 ETR_like 2-enoyl thioe 96.4 0.038 8.2E-07 38.5 8.6 41 12-52 138-178 (323)
416 TIGR00561 pntA NAD(P) transhyd 96.4 0.11 2.3E-06 39.5 11.2 82 12-101 163-257 (511)
417 TIGR00872 gnd_rel 6-phosphoglu 96.4 0.15 3.1E-06 35.9 11.4 84 16-102 3-96 (298)
418 cd08238 sorbose_phosphate_red 96.4 0.055 1.2E-06 39.6 9.6 42 13-54 176-220 (410)
419 PF02670 DXP_reductoisom: 1-de 96.4 0.042 9.1E-07 34.1 7.6 42 16-57 1-46 (129)
420 PF02737 3HCDH_N: 3-hydroxyacy 96.4 0.022 4.7E-07 37.2 6.7 39 16-55 2-40 (180)
421 cd01485 E1-1_like Ubiquitin ac 96.4 0.081 1.8E-06 35.1 9.5 35 10-45 16-51 (198)
422 PF12242 Eno-Rase_NADH_b: NAD( 96.4 0.0062 1.3E-07 34.1 3.4 33 12-45 37-72 (78)
423 PTZ00354 alcohol dehydrogenase 96.4 0.067 1.5E-06 37.4 9.6 42 12-53 140-181 (334)
424 PF02826 2-Hacid_dh_C: D-isome 96.3 0.019 4.1E-07 37.4 6.1 42 8-50 31-72 (178)
425 PRK14175 bifunctional 5,10-met 96.3 0.02 4.3E-07 40.2 6.5 42 9-50 154-195 (286)
426 PRK13403 ketol-acid reductoiso 96.3 0.074 1.6E-06 38.1 9.2 89 9-103 12-110 (335)
427 PRK05086 malate dehydrogenase; 96.3 0.017 3.6E-07 41.0 6.0 35 14-48 1-38 (312)
428 PLN02586 probable cinnamyl alc 96.2 0.056 1.2E-06 38.9 8.7 39 12-51 183-221 (360)
429 PRK14194 bifunctional 5,10-met 96.2 0.016 3.6E-07 40.9 5.7 43 9-51 155-197 (301)
430 PRK09288 purT phosphoribosylgl 96.2 0.081 1.8E-06 38.4 9.5 74 12-100 11-84 (395)
431 PRK15116 sulfur acceptor prote 96.2 0.15 3.2E-06 35.6 10.2 36 9-45 26-62 (268)
432 COG3007 Uncharacterized paraqu 96.2 0.072 1.6E-06 37.7 8.5 88 12-101 40-141 (398)
433 PF02882 THF_DHG_CYH_C: Tetrah 96.2 0.014 3.1E-07 37.4 4.9 44 9-52 32-75 (160)
434 TIGR03451 mycoS_dep_FDH mycoth 96.2 0.067 1.5E-06 38.3 8.8 41 12-53 176-217 (358)
435 cd08233 butanediol_DH_like (2R 96.2 0.067 1.5E-06 38.0 8.8 78 12-101 172-251 (351)
436 cd01489 Uba2_SUMO Ubiquitin ac 96.2 0.087 1.9E-06 37.5 9.2 29 16-45 2-31 (312)
437 COG2227 UbiG 2-polyprenyl-3-me 96.2 0.054 1.2E-06 37.0 7.7 45 11-58 58-102 (243)
438 cd08248 RTN4I1 Human Reticulon 96.2 0.12 2.6E-06 36.6 10.0 35 12-46 162-196 (350)
439 cd08297 CAD3 Cinnamyl alcohol 96.2 0.08 1.7E-06 37.4 9.1 40 12-51 165-204 (341)
440 PRK14968 putative methyltransf 96.2 0.12 2.5E-06 33.3 9.2 77 12-103 23-102 (188)
441 PRK07411 hypothetical protein; 96.2 0.091 2E-06 38.5 9.4 35 10-45 35-70 (390)
442 PRK10637 cysG siroheme synthas 96.2 0.092 2E-06 39.3 9.6 43 3-46 2-44 (457)
443 PLN02740 Alcohol dehydrogenase 96.2 0.12 2.6E-06 37.4 10.1 41 12-53 198-239 (381)
444 TIGR02818 adh_III_F_hyde S-(hy 96.2 0.12 2.7E-06 37.2 10.1 79 12-101 185-265 (368)
445 TIGR03201 dearomat_had 6-hydro 96.1 0.14 3E-06 36.6 10.2 40 12-52 166-205 (349)
446 cd00755 YgdL_like Family of ac 96.1 0.11 2.4E-06 35.4 9.2 36 9-45 7-43 (231)
447 PRK06129 3-hydroxyacyl-CoA deh 96.1 0.047 1E-06 38.5 7.6 37 15-52 4-40 (308)
448 KOG0023 Alcohol dehydrogenase, 96.1 0.074 1.6E-06 38.0 8.3 76 12-98 181-257 (360)
449 cd00650 LDH_MDH_like NAD-depen 96.1 0.019 4.2E-07 39.6 5.5 44 16-59 1-48 (263)
450 KOG0024 Sorbitol dehydrogenase 96.1 0.19 4E-06 36.0 10.3 84 12-102 169-253 (354)
451 cd08300 alcohol_DH_class_III c 96.1 0.19 4.2E-06 36.1 10.8 79 12-101 186-266 (368)
452 PRK10754 quinone oxidoreductas 96.1 0.083 1.8E-06 37.0 8.8 40 12-51 140-179 (327)
453 PRK14851 hypothetical protein; 96.1 0.12 2.6E-06 40.5 10.2 81 10-100 40-142 (679)
454 PLN02178 cinnamyl-alcohol dehy 96.1 0.095 2.1E-06 38.0 9.2 37 12-49 178-214 (375)
455 PRK07878 molybdopterin biosynt 96.1 0.12 2.5E-06 38.0 9.6 35 10-45 39-74 (392)
456 PRK15469 ghrA bifunctional gly 96.1 0.038 8.2E-07 39.3 6.9 38 9-47 132-169 (312)
457 PRK13243 glyoxylate reductase; 96.1 0.06 1.3E-06 38.6 8.0 39 9-48 146-184 (333)
458 PF08643 DUF1776: Fungal famil 96.0 0.026 5.7E-07 39.8 5.9 73 13-88 3-76 (299)
459 cd08281 liver_ADH_like1 Zinc-d 96.0 0.12 2.6E-06 37.2 9.6 39 12-51 191-230 (371)
460 PRK12550 shikimate 5-dehydroge 96.0 0.031 6.7E-07 39.0 6.3 44 13-57 122-166 (272)
461 cd01484 E1-2_like Ubiquitin ac 96.0 0.18 3.9E-06 34.4 9.8 29 16-45 2-31 (234)
462 cd08231 MDR_TM0436_like Hypoth 96.0 0.15 3.2E-06 36.4 9.8 39 12-51 177-216 (361)
463 cd08269 Zn_ADH9 Alcohol dehydr 96.0 0.092 2E-06 36.4 8.6 39 12-51 129-168 (312)
464 KOG2013 SMT3/SUMO-activating c 96.0 0.043 9.3E-07 41.1 6.9 84 11-104 10-94 (603)
465 cd05285 sorbitol_DH Sorbitol d 96.0 0.11 2.4E-06 36.8 9.0 40 12-52 162-202 (343)
466 TIGR01758 MDH_euk_cyt malate d 95.9 0.032 6.9E-07 39.9 6.0 77 15-104 1-88 (324)
467 PRK14188 bifunctional 5,10-met 95.9 0.07 1.5E-06 37.7 7.5 38 10-47 155-193 (296)
468 PF03807 F420_oxidored: NADP o 95.9 0.048 1E-06 31.4 5.8 40 18-58 4-47 (96)
469 cd08301 alcohol_DH_plants Plan 95.9 0.18 3.8E-06 36.3 9.7 79 12-101 187-267 (369)
470 cd01483 E1_enzyme_family Super 95.9 0.22 4.8E-06 31.0 9.8 77 16-102 2-100 (143)
471 PRK14191 bifunctional 5,10-met 95.8 0.053 1.1E-06 38.1 6.7 42 9-50 153-194 (285)
472 PRK06932 glycerate dehydrogena 95.8 0.089 1.9E-06 37.4 8.0 64 10-75 144-211 (314)
473 cd08230 glucose_DH Glucose deh 95.8 0.11 2.3E-06 37.2 8.5 34 12-46 172-205 (355)
474 KOG0069 Glyoxylate/hydroxypyru 95.8 0.16 3.4E-06 36.5 9.1 87 9-99 158-253 (336)
475 PRK06487 glycerate dehydrogena 95.8 0.037 7.9E-07 39.4 6.0 64 10-75 145-211 (317)
476 PRK00141 murD UDP-N-acetylmura 95.8 0.15 3.3E-06 38.2 9.5 78 11-107 13-90 (473)
477 KOG4039 Serine/threonine kinas 95.8 0.025 5.4E-07 37.2 4.7 81 9-104 14-96 (238)
478 cd08235 iditol_2_DH_like L-idi 95.8 0.13 2.8E-06 36.4 8.8 79 12-101 165-244 (343)
479 PRK14189 bifunctional 5,10-met 95.8 0.036 7.8E-07 38.9 5.8 43 9-51 154-196 (285)
480 PRK07530 3-hydroxybutyryl-CoA 95.8 0.41 8.8E-06 33.5 11.1 40 14-54 5-44 (292)
481 PF12076 Wax2_C: WAX2 C-termin 95.7 0.042 9.1E-07 35.1 5.4 41 16-58 1-41 (164)
482 PRK10309 galactitol-1-phosphat 95.7 0.19 4E-06 35.8 9.3 39 12-51 160-199 (347)
483 PRK14852 hypothetical protein; 95.7 0.17 3.7E-06 41.2 9.7 81 10-100 329-431 (989)
484 PRK10792 bifunctional 5,10-met 95.7 0.049 1.1E-06 38.2 6.0 43 9-51 155-197 (285)
485 PRK08410 2-hydroxyacid dehydro 95.7 0.12 2.6E-06 36.7 8.1 65 9-75 141-210 (311)
486 PLN02928 oxidoreductase family 95.7 0.15 3.3E-06 36.7 8.7 36 10-46 156-191 (347)
487 smart00829 PKS_ER Enoylreducta 95.6 0.18 3.9E-06 34.1 8.8 42 12-53 104-145 (288)
488 PRK13256 thiopurine S-methyltr 95.6 0.079 1.7E-06 36.0 6.8 60 12-74 43-115 (226)
489 PRK11064 wecC UDP-N-acetyl-D-m 95.6 0.26 5.7E-06 36.4 10.0 88 14-103 4-123 (415)
490 TIGR03366 HpnZ_proposed putati 95.6 0.17 3.7E-06 35.0 8.7 38 12-50 120-158 (280)
491 cd08296 CAD_like Cinnamyl alco 95.6 0.21 4.6E-06 35.3 9.3 40 12-52 163-202 (333)
492 cd08274 MDR9 Medium chain dehy 95.6 0.24 5.3E-06 35.0 9.6 36 12-47 177-212 (350)
493 PRK09599 6-phosphogluconate de 95.6 0.34 7.4E-06 34.1 10.2 84 16-103 3-98 (301)
494 cd08277 liver_alcohol_DH_like 95.6 0.3 6.6E-06 35.1 10.2 41 12-53 184-225 (365)
495 PRK14190 bifunctional 5,10-met 95.6 0.067 1.5E-06 37.5 6.5 43 9-51 154-196 (284)
496 PRK08328 hypothetical protein; 95.6 0.084 1.8E-06 35.9 6.9 35 10-45 24-59 (231)
497 cd05284 arabinose_DH_like D-ar 95.6 0.17 3.7E-06 35.7 8.7 39 12-51 167-206 (340)
498 PRK06153 hypothetical protein; 95.5 0.31 6.8E-06 35.7 9.8 35 10-45 173-208 (393)
499 cd00401 AdoHcyase S-adenosyl-L 95.5 0.065 1.4E-06 39.6 6.5 41 10-51 199-239 (413)
500 PRK07066 3-hydroxybutyryl-CoA 95.5 0.33 7E-06 34.8 9.8 38 14-52 8-45 (321)
No 1
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.91 E-value=2.4e-23 Score=138.88 Aligned_cols=100 Identities=31% Similarity=0.377 Sum_probs=90.4
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
..+++|.++|||+++|||.++++.|.+.|++|+++.|+.++++++..++.. .++..+.+||+|+++++.+++.+.++|
T Consensus 2 ~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~~ 79 (246)
T COG4221 2 TTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEEF 79 (246)
T ss_pred CCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHhh
Confidence 456789999999999999999999999999999999999999999888864 468999999999999999999999999
Q ss_pred CCCCcEEEEcCCCCCcchhhccc
Q 033299 89 DGKLNILVSSSAKVPFELLISEK 111 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~~~~~~~ 111 (122)
+++|+||||||+....+..+..
T Consensus 80 -g~iDiLvNNAGl~~g~~~~~~~ 101 (246)
T COG4221 80 -GRIDILVNNAGLALGDPLDEAD 101 (246)
T ss_pred -CcccEEEecCCCCcCChhhhCC
Confidence 8999999999999776554443
No 2
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.90 E-value=1.6e-22 Score=137.58 Aligned_cols=102 Identities=26% Similarity=0.401 Sum_probs=92.2
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhc-CCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSK-GLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
.+++++++|||||+|||.++++.|+++|++|+++.|+.+++.++.+++... +.++.++.+|+++++.+.++.+++.+..
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 356789999999999999999999999999999999999999999999865 4678999999999999999999998886
Q ss_pred CCCCcEEEEcCCCCCcchhhcccc
Q 033299 89 DGKLNILVSSSAKVPFELLISEKL 112 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~~~~~~~~ 112 (122)
++||+||||||+....++.+.+.
T Consensus 83 -~~IdvLVNNAG~g~~g~f~~~~~ 105 (265)
T COG0300 83 -GPIDVLVNNAGFGTFGPFLELSL 105 (265)
T ss_pred -CcccEEEECCCcCCccchhhCCh
Confidence 79999999999998876655544
No 3
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.89 E-value=4.4e-23 Score=141.34 Aligned_cols=98 Identities=28% Similarity=0.367 Sum_probs=88.2
Q ss_pred cccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcC-C-eEEEEeecCCCHHHHHHHHHHH
Q 033299 7 QRWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKG-L-KVSGSACDLKIRAERQKLMETV 84 (122)
Q Consensus 7 ~~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~-~~~~~~~Dv~~~~~~~~~~~~~ 84 (122)
.+..+.+|+++|||||+|||.++++.|++.|++++++.|..++++...+++++.. . +++.++||++|.+++.++++++
T Consensus 6 ~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~ 85 (282)
T KOG1205|consen 6 FMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWA 85 (282)
T ss_pred cHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999998888888877776652 3 4999999999999999999999
Q ss_pred HHHcCCCCcEEEEcCCCCCcc
Q 033299 85 CSEFDGKLNILVSSSAKVPFE 105 (122)
Q Consensus 85 ~~~~~g~id~lv~~ag~~~~~ 105 (122)
.+++ |++|+||||||+....
T Consensus 86 ~~~f-g~vDvLVNNAG~~~~~ 105 (282)
T KOG1205|consen 86 IRHF-GRVDVLVNNAGISLVG 105 (282)
T ss_pred HHhc-CCCCEEEecCcccccc
Confidence 9999 9999999999999843
No 4
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.86 E-value=1.1e-20 Score=129.26 Aligned_cols=101 Identities=29% Similarity=0.412 Sum_probs=92.4
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
.+..|+.+||||+++|+|++++.+++++|+.+++.+.+.+...+..+++++.| +++.+.||+++++.+.+..+++.+++
T Consensus 34 k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk~e~ 112 (300)
T KOG1201|consen 34 KSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKVKKEV 112 (300)
T ss_pred hhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 46789999999999999999999999999999999999998889998888775 89999999999999999999999999
Q ss_pred CCCCcEEEEcCCCCCcchhhccc
Q 033299 89 DGKLNILVSSSAKVPFELLISEK 111 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~~~~~~~ 111 (122)
|.+|+||||||+...+...+.+
T Consensus 113 -G~V~ILVNNAGI~~~~~ll~~~ 134 (300)
T KOG1201|consen 113 -GDVDILVNNAGIVTGKKLLDCS 134 (300)
T ss_pred -CCceEEEeccccccCCCccCCC
Confidence 8999999999999877655443
No 5
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.85 E-value=2.9e-20 Score=128.21 Aligned_cols=99 Identities=25% Similarity=0.420 Sum_probs=87.8
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
..+++|+++|||+++|||.+++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|++++.++++++.+++
T Consensus 2 ~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 81 (275)
T PRK05876 2 DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLL 81 (275)
T ss_pred CCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 44778999999999999999999999999999999999888888777776666678899999999999999999999998
Q ss_pred CCCCcEEEEcCCCCCcchhh
Q 033299 89 DGKLNILVSSSAKVPFELLI 108 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~~~~ 108 (122)
|++|+||||||+.......
T Consensus 82 -g~id~li~nAg~~~~~~~~ 100 (275)
T PRK05876 82 -GHVDVVFSNAGIVVGGPIV 100 (275)
T ss_pred -CCCCEEEECCCcCCCCCcc
Confidence 8999999999987655443
No 6
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.85 E-value=3.5e-20 Score=125.99 Aligned_cols=98 Identities=26% Similarity=0.445 Sum_probs=88.2
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
+.+++|+++|||+++|||.+++++|+++|++|++++|+.+..++..+++...+.++.++.+|+++++++.++++++.+++
T Consensus 5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL 84 (253)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 45789999999999999999999999999999999999888888888777666678899999999999999999999999
Q ss_pred CCCCcEEEEcCCCCCcchh
Q 033299 89 DGKLNILVSSSAKVPFELL 107 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~~~ 107 (122)
+++|+||||||.....+.
T Consensus 85 -g~id~lv~~ag~~~~~~~ 102 (253)
T PRK05867 85 -GGIDIAVCNAGIITVTPM 102 (253)
T ss_pred -CCCCEEEECCCCCCCCCh
Confidence 899999999998765443
No 7
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.85 E-value=4e-20 Score=130.55 Aligned_cols=99 Identities=22% Similarity=0.293 Sum_probs=89.4
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
+.+++|+++|||+++|||.++++.|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus 3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 82 (330)
T PRK06139 3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFG 82 (330)
T ss_pred cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 45778999999999999999999999999999999999999888888887777788899999999999999999999988
Q ss_pred CCCCcEEEEcCCCCCcchhh
Q 033299 89 DGKLNILVSSSAKVPFELLI 108 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~~~~ 108 (122)
+++|++|||||+.....+.
T Consensus 83 -g~iD~lVnnAG~~~~~~~~ 101 (330)
T PRK06139 83 -GRIDVWVNNVGVGAVGRFE 101 (330)
T ss_pred -CCCCEEEECCCcCCCCCcc
Confidence 8999999999987655443
No 8
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.85 E-value=5.6e-20 Score=125.00 Aligned_cols=95 Identities=26% Similarity=0.400 Sum_probs=86.4
Q ss_pred ccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 8 RWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 8 ~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
|+++++|+++|||+++|||.++++.|+++|++|++++|+.++.++..+++...+.++.++.+|++++++++++++++.++
T Consensus 1 ~~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (254)
T PRK07478 1 MMRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVER 80 (254)
T ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 34577899999999999999999999999999999999988888888777766667889999999999999999999999
Q ss_pred cCCCCcEEEEcCCCCC
Q 033299 88 FDGKLNILVSSSAKVP 103 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~ 103 (122)
+ +++|+||||||+..
T Consensus 81 ~-~~id~li~~ag~~~ 95 (254)
T PRK07478 81 F-GGLDIAFNNAGTLG 95 (254)
T ss_pred c-CCCCEEEECCCCCC
Confidence 9 89999999999864
No 9
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.85 E-value=1e-20 Score=123.32 Aligned_cols=95 Identities=33% Similarity=0.510 Sum_probs=85.6
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
|++.|.++|||||++|||+++++++.+.|..|++++|+++.+++..++++ .+....|||.|.++..++++++.+.+
T Consensus 1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p----~~~t~v~Dv~d~~~~~~lvewLkk~~ 76 (245)
T COG3967 1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENP----EIHTEVCDVADRDSRRELVEWLKKEY 76 (245)
T ss_pred CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCc----chheeeecccchhhHHHHHHHHHhhC
Confidence 46788999999999999999999999999999999999998887766553 68889999999999999999999999
Q ss_pred CCCCcEEEEcCCCCCcchhh
Q 033299 89 DGKLNILVSSSAKVPFELLI 108 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~~~~ 108 (122)
+.+++||||||+.....+.
T Consensus 77 -P~lNvliNNAGIqr~~dlt 95 (245)
T COG3967 77 -PNLNVLINNAGIQRNEDLT 95 (245)
T ss_pred -Cchheeeecccccchhhcc
Confidence 8999999999998655443
No 10
>PRK08862 short chain dehydrogenase; Provisional
Probab=99.84 E-value=7.6e-20 Score=123.08 Aligned_cols=94 Identities=16% Similarity=0.277 Sum_probs=85.1
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
|++++|+++|||+++|||++++++|+++|++|++++|+.+++++..+++...+.++..+.+|++++++++++++++.+++
T Consensus 1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (227)
T PRK08862 1 MDIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQF 80 (227)
T ss_pred CCCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHh
Confidence 35789999999999999999999999999999999999998888888777666678889999999999999999999999
Q ss_pred CC-CCcEEEEcCCCCC
Q 033299 89 DG-KLNILVSSSAKVP 103 (122)
Q Consensus 89 ~g-~id~lv~~ag~~~ 103 (122)
+ ++|++|||||...
T Consensus 81 -g~~iD~li~nag~~~ 95 (227)
T PRK08862 81 -NRAPDVLVNNWTSSP 95 (227)
T ss_pred -CCCCCEEEECCccCC
Confidence 7 8999999998653
No 11
>PRK06720 hypothetical protein; Provisional
Probab=99.84 E-value=1.5e-19 Score=116.78 Aligned_cols=98 Identities=20% Similarity=0.315 Sum_probs=86.1
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
+.+++|.++|||+++|||.++++.|.+.|++|++++|+.+..++..+++...+.+..++.+|+++.+++.++++++.+.+
T Consensus 12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~ 91 (169)
T PRK06720 12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAF 91 (169)
T ss_pred cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999999999999999887777667776555667788999999999999999999999
Q ss_pred CCCCcEEEEcCCCCCcchh
Q 033299 89 DGKLNILVSSSAKVPFELL 107 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~~~ 107 (122)
|++|++|||||+......
T Consensus 92 -G~iDilVnnAG~~~~~~~ 109 (169)
T PRK06720 92 -SRIDMLFQNAGLYKIDSI 109 (169)
T ss_pred -CCCCEEEECCCcCCCCCc
Confidence 899999999998764433
No 12
>PRK07791 short chain dehydrogenase; Provisional
Probab=99.83 E-value=1.2e-19 Score=125.66 Aligned_cols=96 Identities=23% Similarity=0.297 Sum_probs=84.4
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecCh---------hHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHH
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNE---------TELNERIQEWKSKGLKVSGSACDLKIRAERQKL 80 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~ 80 (122)
.+++|+++|||+++|||.++++.|++.|++|++++++. +...+..+++...+.++.++.+|++|++++.++
T Consensus 3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 82 (286)
T PRK07791 3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL 82 (286)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence 46789999999999999999999999999999988765 666677777766666788999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEcCCCCCcch
Q 033299 81 METVCSEFDGKLNILVSSSAKVPFEL 106 (122)
Q Consensus 81 ~~~~~~~~~g~id~lv~~ag~~~~~~ 106 (122)
++++.+++ |++|+||||||+.....
T Consensus 83 ~~~~~~~~-g~id~lv~nAG~~~~~~ 107 (286)
T PRK07791 83 VDAAVETF-GGLDVLVNNAGILRDRM 107 (286)
T ss_pred HHHHHHhc-CCCCEEEECCCCCCCCC
Confidence 99999999 89999999999876543
No 13
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.83 E-value=1.6e-19 Score=122.90 Aligned_cols=101 Identities=25% Similarity=0.315 Sum_probs=86.8
Q ss_pred ccccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChh-HHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHH
Q 033299 6 EQRWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNET-ELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETV 84 (122)
Q Consensus 6 ~~~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~ 84 (122)
++++++++|+++|||+++|||.+++++|+++|++|++++|+.+ ...+..+++...+.++.++.+|++|++++.++++++
T Consensus 1 ~~~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~ 80 (254)
T PRK06114 1 PQLFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVART 80 (254)
T ss_pred CCccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 3567789999999999999999999999999999999998754 456666666655667888999999999999999999
Q ss_pred HHHcCCCCcEEEEcCCCCCcchh
Q 033299 85 CSEFDGKLNILVSSSAKVPFELL 107 (122)
Q Consensus 85 ~~~~~g~id~lv~~ag~~~~~~~ 107 (122)
.+++ +++|++|||||+....+.
T Consensus 81 ~~~~-g~id~li~~ag~~~~~~~ 102 (254)
T PRK06114 81 EAEL-GALTLAVNAAGIANANPA 102 (254)
T ss_pred HHHc-CCCCEEEECCCCCCCCCh
Confidence 9999 899999999998765443
No 14
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=99.83 E-value=6.2e-20 Score=126.32 Aligned_cols=99 Identities=37% Similarity=0.485 Sum_probs=89.2
Q ss_pred ccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcC---CeEEEEeecCCCHHHHHHHHHHH
Q 033299 8 RWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKG---LKVSGSACDLKIRAERQKLMETV 84 (122)
Q Consensus 8 ~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~~~~~~~~~ 84 (122)
++++.+|+++|||+++|||++++++|++.|++|++++|+.+..++..+++...+ .++..+.||+++++.+.+++++.
T Consensus 3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~ 82 (270)
T KOG0725|consen 3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA 82 (270)
T ss_pred CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999888888877643 46999999999999999999999
Q ss_pred HHHcCCCCcEEEEcCCCCCcch
Q 033299 85 CSEFDGKLNILVSSSAKVPFEL 106 (122)
Q Consensus 85 ~~~~~g~id~lv~~ag~~~~~~ 106 (122)
.+++.|+||++|||||......
T Consensus 83 ~~~~~GkidiLvnnag~~~~~~ 104 (270)
T KOG0725|consen 83 VEKFFGKIDILVNNAGALGLTG 104 (270)
T ss_pred HHHhCCCCCEEEEcCCcCCCCC
Confidence 9993389999999999987653
No 15
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.83 E-value=1.2e-19 Score=123.53 Aligned_cols=96 Identities=21% Similarity=0.329 Sum_probs=81.5
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
+.+.+|+++|||+++|||.+++++|+++|++|++++|+.. ++..+.+...+.++.++.+|++++++++++++++.+.+
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12481 4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVM 81 (251)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 4678999999999999999999999999999999888643 23344444455678899999999999999999999999
Q ss_pred CCCCcEEEEcCCCCCcchh
Q 033299 89 DGKLNILVSSSAKVPFELL 107 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~~~ 107 (122)
|++|++|||||+....+.
T Consensus 82 -g~iD~lv~~ag~~~~~~~ 99 (251)
T PRK12481 82 -GHIDILINNAGIIRRQDL 99 (251)
T ss_pred -CCCCEEEECCCcCCCCCc
Confidence 899999999998765443
No 16
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.83 E-value=2.1e-19 Score=122.55 Aligned_cols=95 Identities=26% Similarity=0.351 Sum_probs=85.6
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHh--cCCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKS--KGLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
.+++|+++|||+++|||.++++.|+++|++|++++|+.+..++..+++.. .+.++.++.+|+++++++.++++++.++
T Consensus 4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (260)
T PRK07063 4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA 83 (260)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 47789999999999999999999999999999999998888888877765 3457889999999999999999999999
Q ss_pred cCCCCcEEEEcCCCCCcc
Q 033299 88 FDGKLNILVSSSAKVPFE 105 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~~~ 105 (122)
+ +++|++|||||.....
T Consensus 84 ~-g~id~li~~ag~~~~~ 100 (260)
T PRK07063 84 F-GPLDVLVNNAGINVFA 100 (260)
T ss_pred h-CCCcEEEECCCcCCCC
Confidence 9 8999999999986543
No 17
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.83 E-value=2.4e-19 Score=121.97 Aligned_cols=99 Identities=29% Similarity=0.397 Sum_probs=88.1
Q ss_pred ccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 8 RWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 8 ~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
++++++|+++|||++++||.+++++|+++|++|++.+|+.++.++..+.+...+.++.++.+|++|+++++++++++.++
T Consensus 5 ~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (255)
T PRK07523 5 LFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAE 84 (255)
T ss_pred ccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence 45678999999999999999999999999999999999988877777777665667889999999999999999999999
Q ss_pred cCCCCcEEEEcCCCCCcchh
Q 033299 88 FDGKLNILVSSSAKVPFELL 107 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~~~~~ 107 (122)
+ +++|++|||+|.....+.
T Consensus 85 ~-~~~d~li~~ag~~~~~~~ 103 (255)
T PRK07523 85 I-GPIDILVNNAGMQFRTPL 103 (255)
T ss_pred c-CCCCEEEECCCCCCCCCh
Confidence 8 899999999998765544
No 18
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.83 E-value=2e-19 Score=126.14 Aligned_cols=96 Identities=26% Similarity=0.279 Sum_probs=86.1
Q ss_pred ccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhc--CCeEEEEeecCCCHHHHHHHHHHHH
Q 033299 8 RWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSK--GLKVSGSACDLKIRAERQKLMETVC 85 (122)
Q Consensus 8 ~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~ 85 (122)
+.++++|+++|||+++|||.++++.|+++|++|++++|+.++.++..+++... +.++.++.||+++.++++++++++.
T Consensus 9 ~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~ 88 (313)
T PRK05854 9 VPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLR 88 (313)
T ss_pred CcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHH
Confidence 55688999999999999999999999999999999999998888887777653 2468899999999999999999999
Q ss_pred HHcCCCCcEEEEcCCCCCc
Q 033299 86 SEFDGKLNILVSSSAKVPF 104 (122)
Q Consensus 86 ~~~~g~id~lv~~ag~~~~ 104 (122)
+.+ +++|+||||||+...
T Consensus 89 ~~~-~~iD~li~nAG~~~~ 106 (313)
T PRK05854 89 AEG-RPIHLLINNAGVMTP 106 (313)
T ss_pred HhC-CCccEEEECCccccC
Confidence 988 899999999998754
No 19
>PRK06194 hypothetical protein; Provisional
Probab=99.83 E-value=2e-19 Score=124.17 Aligned_cols=97 Identities=22% Similarity=0.362 Sum_probs=86.0
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
.+++|++||||++||||.+++++|+++|++|++++|+.+..++..+++...+.++.++.+|++|++++.++++.+.+++
T Consensus 3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~- 81 (287)
T PRK06194 3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERF- 81 (287)
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 4567899999999999999999999999999999999887777777776555678889999999999999999999998
Q ss_pred CCCcEEEEcCCCCCcchh
Q 033299 90 GKLNILVSSSAKVPFELL 107 (122)
Q Consensus 90 g~id~lv~~ag~~~~~~~ 107 (122)
+++|+||||||.......
T Consensus 82 g~id~vi~~Ag~~~~~~~ 99 (287)
T PRK06194 82 GAVHLLFNNAGVGAGGLV 99 (287)
T ss_pred CCCCEEEECCCCCCCCCc
Confidence 899999999999765443
No 20
>PRK08589 short chain dehydrogenase; Validated
Probab=99.83 E-value=1.5e-19 Score=124.23 Aligned_cols=92 Identities=23% Similarity=0.367 Sum_probs=83.4
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
.+++|++||||+++|||.++++.|+++|++|++++|+ +...+..+++...+.++.++.+|+++++++.++++++.+++
T Consensus 3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 80 (272)
T PRK08589 3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQF- 80 (272)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc-
Confidence 4678999999999999999999999999999999999 77777777776666678899999999999999999999999
Q ss_pred CCCcEEEEcCCCCC
Q 033299 90 GKLNILVSSSAKVP 103 (122)
Q Consensus 90 g~id~lv~~ag~~~ 103 (122)
+++|+||||||+..
T Consensus 81 g~id~li~~Ag~~~ 94 (272)
T PRK08589 81 GRVDVLFNNAGVDN 94 (272)
T ss_pred CCcCEEEECCCCCC
Confidence 89999999999874
No 21
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.83 E-value=2.2e-19 Score=125.65 Aligned_cols=97 Identities=29% Similarity=0.340 Sum_probs=89.2
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhc--CCeEEEEeecCCCHHHHHHHHHHHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSK--GLKVSGSACDLKIRAERQKLMETVCS 86 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~ 86 (122)
..+.+++++|||+++|||.++++.|+.+|++|++..|+.+..++..++++.. ..++.+.+||+++.+++.++.+++.+
T Consensus 31 ~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~ 110 (314)
T KOG1208|consen 31 IDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK 110 (314)
T ss_pred ccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence 5678899999999999999999999999999999999999999999998863 35688999999999999999999999
Q ss_pred HcCCCCcEEEEcCCCCCcch
Q 033299 87 EFDGKLNILVSSSAKVPFEL 106 (122)
Q Consensus 87 ~~~g~id~lv~~ag~~~~~~ 106 (122)
.+ +++|++|||||++..+.
T Consensus 111 ~~-~~ldvLInNAGV~~~~~ 129 (314)
T KOG1208|consen 111 KE-GPLDVLINNAGVMAPPF 129 (314)
T ss_pred cC-CCccEEEeCcccccCCc
Confidence 88 89999999999997665
No 22
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=99.83 E-value=2.2e-19 Score=114.98 Aligned_cols=96 Identities=33% Similarity=0.450 Sum_probs=85.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC-CeEEEeecC--hhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCC
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFG-AIVHTCSRN--ETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDG 90 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g-~~v~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g 90 (122)
|+++|||+++|||.+++++|+++| +.|++++|+ .+..++..+++...+.++.++++|++++++++++++++.+.+ +
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRF-G 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHH-S
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccc-c
Confidence 689999999999999999999996 578899998 777888888888777889999999999999999999999888 8
Q ss_pred CCcEEEEcCCCCCcchhhcc
Q 033299 91 KLNILVSSSAKVPFELLISE 110 (122)
Q Consensus 91 ~id~lv~~ag~~~~~~~~~~ 110 (122)
++|++|||+|+.......+.
T Consensus 80 ~ld~li~~ag~~~~~~~~~~ 99 (167)
T PF00106_consen 80 PLDILINNAGIFSDGSLDDL 99 (167)
T ss_dssp SESEEEEECSCTTSBSGGGS
T ss_pred cccccccccccccccccccc
Confidence 99999999999986665544
No 23
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.83 E-value=2.9e-19 Score=126.31 Aligned_cols=98 Identities=19% Similarity=0.261 Sum_probs=88.2
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
..+++++++|||+++|||.++++.|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+++
T Consensus 4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~ 83 (334)
T PRK07109 4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEEL 83 (334)
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence 34678999999999999999999999999999999999988888888887777789999999999999999999999999
Q ss_pred CCCCcEEEEcCCCCCcchh
Q 033299 89 DGKLNILVSSSAKVPFELL 107 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~~~ 107 (122)
+++|++|||||.....+.
T Consensus 84 -g~iD~lInnAg~~~~~~~ 101 (334)
T PRK07109 84 -GPIDTWVNNAMVTVFGPF 101 (334)
T ss_pred -CCCCEEEECCCcCCCCch
Confidence 899999999998755443
No 24
>PRK08303 short chain dehydrogenase; Provisional
Probab=99.83 E-value=2.2e-19 Score=125.62 Aligned_cols=93 Identities=31% Similarity=0.398 Sum_probs=80.5
Q ss_pred ccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecCh----------hHHHHHHHHHHhcCCeEEEEeecCCCHHHH
Q 033299 8 RWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNE----------TELNERIQEWKSKGLKVSGSACDLKIRAER 77 (122)
Q Consensus 8 ~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~----------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~ 77 (122)
|.++++|+++|||+++|||.++++.|++.|++|++++|+. +..++..+++...+.++.++.||+++++++
T Consensus 3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v 82 (305)
T PRK08303 3 MKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQV 82 (305)
T ss_pred CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence 3567899999999999999999999999999999999873 345555556655555788899999999999
Q ss_pred HHHHHHHHHHcCCCCcEEEEcC-CC
Q 033299 78 QKLMETVCSEFDGKLNILVSSS-AK 101 (122)
Q Consensus 78 ~~~~~~~~~~~~g~id~lv~~a-g~ 101 (122)
+++++++.+++ |+||++|||| |+
T Consensus 83 ~~~~~~~~~~~-g~iDilVnnA~g~ 106 (305)
T PRK08303 83 RALVERIDREQ-GRLDILVNDIWGG 106 (305)
T ss_pred HHHHHHHHHHc-CCccEEEECCccc
Confidence 99999999999 8999999999 75
No 25
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.83 E-value=3.2e-19 Score=121.26 Aligned_cols=98 Identities=18% Similarity=0.376 Sum_probs=87.6
Q ss_pred ccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 8 RWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 8 ~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
++++.+|++||||+++|||.+++++|+++|++|++++|+.++.++..+++...+.++.++.+|+++++++.++++++.++
T Consensus 4 ~~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (254)
T PRK08085 4 LFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKD 83 (254)
T ss_pred cccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHh
Confidence 45688999999999999999999999999999999999988888887777665667888999999999999999999999
Q ss_pred cCCCCcEEEEcCCCCCcch
Q 033299 88 FDGKLNILVSSSAKVPFEL 106 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~~~~ 106 (122)
+ +++|++|||+|.....+
T Consensus 84 ~-~~id~vi~~ag~~~~~~ 101 (254)
T PRK08085 84 I-GPIDVLINNAGIQRRHP 101 (254)
T ss_pred c-CCCCEEEECCCcCCCCC
Confidence 8 89999999999875443
No 26
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.83 E-value=3.3e-19 Score=121.89 Aligned_cols=98 Identities=32% Similarity=0.506 Sum_probs=85.9
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhc--CCeEEEEeecCCCHHHHHHHHHHHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSK--GLKVSGSACDLKIRAERQKLMETVCS 86 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~ 86 (122)
..+++|+++|||+++|||.++++.|+++|++|++++|+.+++++..+++... +.++.++.+|++|++++.++++++.+
T Consensus 4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (265)
T PRK07062 4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEA 83 (265)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999988887777776554 24688899999999999999999999
Q ss_pred HcCCCCcEEEEcCCCCCcchh
Q 033299 87 EFDGKLNILVSSSAKVPFELL 107 (122)
Q Consensus 87 ~~~g~id~lv~~ag~~~~~~~ 107 (122)
.+ +++|+||||||+....+.
T Consensus 84 ~~-g~id~li~~Ag~~~~~~~ 103 (265)
T PRK07062 84 RF-GGVDMLVNNAGQGRVSTF 103 (265)
T ss_pred hc-CCCCEEEECCCCCCCCCh
Confidence 99 899999999998754433
No 27
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.82 E-value=3.6e-19 Score=121.37 Aligned_cols=98 Identities=29% Similarity=0.424 Sum_probs=84.3
Q ss_pred cccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHH
Q 033299 7 QRWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCS 86 (122)
Q Consensus 7 ~~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 86 (122)
.++.+++|++||||++++||.++++.|+++|++|+++.|+ +..++..+.+...+.++.++.+|+++.++++++++++.+
T Consensus 9 ~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 87 (258)
T PRK06935 9 DFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALE 87 (258)
T ss_pred ccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 3456889999999999999999999999999999999988 455555555555556788999999999999999999999
Q ss_pred HcCCCCcEEEEcCCCCCcch
Q 033299 87 EFDGKLNILVSSSAKVPFEL 106 (122)
Q Consensus 87 ~~~g~id~lv~~ag~~~~~~ 106 (122)
.+ +++|++|||+|.....+
T Consensus 88 ~~-g~id~li~~ag~~~~~~ 106 (258)
T PRK06935 88 EF-GKIDILVNNAGTIRRAP 106 (258)
T ss_pred Hc-CCCCEEEECCCCCCCCC
Confidence 99 89999999999875443
No 28
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.82 E-value=3.1e-19 Score=122.32 Aligned_cols=95 Identities=27% Similarity=0.345 Sum_probs=82.9
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhc-CCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSK-GLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
+.+++|+++|||+++|||.++++.|+++|++|++++|+.+.+++..+++... +.++.++.+|++|+++++++++++. +
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~ 82 (263)
T PRK08339 4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-N 82 (263)
T ss_pred cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-h
Confidence 3478999999999999999999999999999999999988887777776543 4578899999999999999999985 5
Q ss_pred cCCCCcEEEEcCCCCCcc
Q 033299 88 FDGKLNILVSSSAKVPFE 105 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~~~ 105 (122)
+ |++|++|||||.....
T Consensus 83 ~-g~iD~lv~nag~~~~~ 99 (263)
T PRK08339 83 I-GEPDIFFFSTGGPKPG 99 (263)
T ss_pred h-CCCcEEEECCCCCCCC
Confidence 7 8999999999986544
No 29
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.82 E-value=5.1e-19 Score=121.75 Aligned_cols=99 Identities=25% Similarity=0.356 Sum_probs=87.8
Q ss_pred cccccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHH
Q 033299 5 REQRWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETV 84 (122)
Q Consensus 5 ~~~~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~ 84 (122)
++..+.+++|+++|||++++||.++++.|+++|++|++++|+.+..++..+++...+.++.++.+|+++++++.++++++
T Consensus 2 ~~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 81 (278)
T PRK08277 2 MPNLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQI 81 (278)
T ss_pred CCceeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence 34445688999999999999999999999999999999999988887777777666667889999999999999999999
Q ss_pred HHHcCCCCcEEEEcCCCCCc
Q 033299 85 CSEFDGKLNILVSSSAKVPF 104 (122)
Q Consensus 85 ~~~~~g~id~lv~~ag~~~~ 104 (122)
.+++ +++|++|||||....
T Consensus 82 ~~~~-g~id~li~~ag~~~~ 100 (278)
T PRK08277 82 LEDF-GPCDILINGAGGNHP 100 (278)
T ss_pred HHHc-CCCCEEEECCCCCCc
Confidence 9998 899999999997643
No 30
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.82 E-value=5.2e-19 Score=121.04 Aligned_cols=99 Identities=26% Similarity=0.446 Sum_probs=88.7
Q ss_pred ccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 8 RWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 8 ~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
.+++.+|+++|||++++||.+++++|+++|++|++++|+.++.++..+.+...+.++.++.+|+++++++.++++++.++
T Consensus 5 ~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (265)
T PRK07097 5 LFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKE 84 (265)
T ss_pred ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 45778999999999999999999999999999999999988888777777766667899999999999999999999999
Q ss_pred cCCCCcEEEEcCCCCCcchh
Q 033299 88 FDGKLNILVSSSAKVPFELL 107 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~~~~~ 107 (122)
+ +++|+||||||+....+.
T Consensus 85 ~-~~id~li~~ag~~~~~~~ 103 (265)
T PRK07097 85 V-GVIDILVNNAGIIKRIPM 103 (265)
T ss_pred C-CCCCEEEECCCCCCCCCc
Confidence 9 899999999999765443
No 31
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.82 E-value=4.4e-19 Score=123.41 Aligned_cols=98 Identities=27% Similarity=0.312 Sum_probs=85.1
Q ss_pred ccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 8 RWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 8 ~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
+..+++|+++|||+++|||.++++.|+++|++|++++|+.+.+++..+++.. +.++..+.||++|++++.++++++.++
T Consensus 4 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 82 (296)
T PRK05872 4 MTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAVER 82 (296)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999999998888777766642 345777889999999999999999999
Q ss_pred cCCCCcEEEEcCCCCCcchh
Q 033299 88 FDGKLNILVSSSAKVPFELL 107 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~~~~~ 107 (122)
+ +++|++|||||+....+.
T Consensus 83 ~-g~id~vI~nAG~~~~~~~ 101 (296)
T PRK05872 83 F-GGIDVVVANAGIASGGSV 101 (296)
T ss_pred c-CCCCEEEECCCcCCCcCc
Confidence 8 899999999999765443
No 32
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.82 E-value=7.5e-19 Score=119.52 Aligned_cols=100 Identities=30% Similarity=0.416 Sum_probs=88.8
Q ss_pred ccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 8 RWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 8 ~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
++.+++|+++|||++++||.+++++|+++|++|++++|+.+..++...+++..+.++.++.||+++++++.++++++.+.
T Consensus 6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (256)
T PRK06124 6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE 85 (256)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 45688999999999999999999999999999999999988887777777666667889999999999999999999999
Q ss_pred cCCCCcEEEEcCCCCCcchhh
Q 033299 88 FDGKLNILVSSSAKVPFELLI 108 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~~~~~~ 108 (122)
+ +++|++|||+|.....+..
T Consensus 86 ~-~~id~vi~~ag~~~~~~~~ 105 (256)
T PRK06124 86 H-GRLDILVNNVGARDRRPLA 105 (256)
T ss_pred c-CCCCEEEECCCCCCCCChh
Confidence 8 8999999999987654443
No 33
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.82 E-value=8.9e-19 Score=121.84 Aligned_cols=98 Identities=27% Similarity=0.373 Sum_probs=87.4
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
+.+++++++|||++||||.++++.|+++|++|++++|+.+.+++..+++...+.++.++.+|++|.+++.++++++.+.+
T Consensus 36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 115 (293)
T PRK05866 36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRI 115 (293)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 56778999999999999999999999999999999999888888777776656678899999999999999999999998
Q ss_pred CCCCcEEEEcCCCCCcchh
Q 033299 89 DGKLNILVSSSAKVPFELL 107 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~~~ 107 (122)
+++|++|||||.......
T Consensus 116 -g~id~li~~AG~~~~~~~ 133 (293)
T PRK05866 116 -GGVDILINNAGRSIRRPL 133 (293)
T ss_pred -CCCCEEEECCCCCCCcch
Confidence 899999999998765443
No 34
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.81 E-value=9.8e-19 Score=119.80 Aligned_cols=97 Identities=25% Similarity=0.408 Sum_probs=85.2
Q ss_pred ccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 8 RWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 8 ~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
|+.+++|+++|||++++||.+++++|+..|++|++++|+.+......+++...+.++.++.+|+++++++.++++++.+.
T Consensus 4 ~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~ 83 (264)
T PRK07576 4 MFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADE 83 (264)
T ss_pred cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 45688999999999999999999999999999999999988777766666655556788999999999999999999988
Q ss_pred cCCCCcEEEEcCCCCCcc
Q 033299 88 FDGKLNILVSSSAKVPFE 105 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~~~ 105 (122)
+ +++|++|||||.....
T Consensus 84 ~-~~iD~vi~~ag~~~~~ 100 (264)
T PRK07576 84 F-GPIDVLVSGAAGNFPA 100 (264)
T ss_pred c-CCCCEEEECCCCCCCC
Confidence 8 8999999999976443
No 35
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.81 E-value=9.1e-19 Score=120.51 Aligned_cols=98 Identities=21% Similarity=0.316 Sum_probs=83.0
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhH-------HHHHHHHHHhcCCeEEEEeecCCCHHHHHHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETE-------LNERIQEWKSKGLKVSGSACDLKIRAERQKLM 81 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~ 81 (122)
+.+++|+++|||+++|||.++++.|+++|++|++++|+.+. +++..+++...+.++.++.+|+++++++.+++
T Consensus 2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~ 81 (273)
T PRK08278 2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAV 81 (273)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence 45678999999999999999999999999999999987542 34444555555667889999999999999999
Q ss_pred HHHHHHcCCCCcEEEEcCCCCCcchh
Q 033299 82 ETVCSEFDGKLNILVSSSAKVPFELL 107 (122)
Q Consensus 82 ~~~~~~~~g~id~lv~~ag~~~~~~~ 107 (122)
+++.+.+ +++|+||||||.....+.
T Consensus 82 ~~~~~~~-g~id~li~~ag~~~~~~~ 106 (273)
T PRK08278 82 AKAVERF-GGIDICVNNASAINLTGT 106 (273)
T ss_pred HHHHHHh-CCCCEEEECCCCcCCCCc
Confidence 9999998 899999999998765444
No 36
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.81 E-value=7.9e-19 Score=119.58 Aligned_cols=91 Identities=20% Similarity=0.257 Sum_probs=77.3
Q ss_pred ccCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 10 SLKGMTALVTGGT--RGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 10 ~~~~~~~litG~~--~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
.+++|+++|||++ +|||.+++++|+++|++|++++|+. +..+..+++. +.++.++.||++++++++++++++.++
T Consensus 4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 80 (252)
T PRK06079 4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV--DEEDLLVECDVASDESIERAFATIKER 80 (252)
T ss_pred ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc--cCceeEEeCCCCCHHHHHHHHHHHHHH
Confidence 4678999999999 7999999999999999999999883 4444444443 235788999999999999999999999
Q ss_pred cCCCCcEEEEcCCCCCc
Q 033299 88 FDGKLNILVSSSAKVPF 104 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~~ 104 (122)
+ |++|+||||||+...
T Consensus 81 ~-g~iD~lv~nAg~~~~ 96 (252)
T PRK06079 81 V-GKIDGIVHAIAYAKK 96 (252)
T ss_pred h-CCCCEEEEccccccc
Confidence 9 899999999998753
No 37
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.81 E-value=1.4e-18 Score=118.80 Aligned_cols=97 Identities=29% Similarity=0.398 Sum_probs=86.0
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
.+++++++|||+++|||.+++++|+++|++|++++|+.+..++..+++...+.++.++.+|+++++++.++++++.+.+
T Consensus 7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 85 (263)
T PRK07814 7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF- 85 (263)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence 4678999999999999999999999999999999999888777777776555678899999999999999999999998
Q ss_pred CCCcEEEEcCCCCCcchh
Q 033299 90 GKLNILVSSSAKVPFELL 107 (122)
Q Consensus 90 g~id~lv~~ag~~~~~~~ 107 (122)
+++|+|||+||.......
T Consensus 86 ~~id~vi~~Ag~~~~~~~ 103 (263)
T PRK07814 86 GRLDIVVNNVGGTMPNPL 103 (263)
T ss_pred CCCCEEEECCCCCCCCCh
Confidence 899999999998654433
No 38
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.81 E-value=1.4e-18 Score=121.48 Aligned_cols=98 Identities=27% Similarity=0.383 Sum_probs=84.8
Q ss_pred cccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecC-hhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHH
Q 033299 7 QRWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRN-ETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVC 85 (122)
Q Consensus 7 ~~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~ 85 (122)
...++++|+++|||+++|||.++++.|+++|++|++.+++ .+..++..+++...+.++.++.+|+++++++.++++++.
T Consensus 6 ~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~ 85 (306)
T PRK07792 6 NTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAV 85 (306)
T ss_pred CCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 3467889999999999999999999999999999998875 345566667776666788999999999999999999998
Q ss_pred HHcCCCCcEEEEcCCCCCcch
Q 033299 86 SEFDGKLNILVSSSAKVPFEL 106 (122)
Q Consensus 86 ~~~~g~id~lv~~ag~~~~~~ 106 (122)
+ + |++|+||||||+.....
T Consensus 86 ~-~-g~iD~li~nAG~~~~~~ 104 (306)
T PRK07792 86 G-L-GGLDIVVNNAGITRDRM 104 (306)
T ss_pred H-h-CCCCEEEECCCCCCCCC
Confidence 8 8 89999999999976543
No 39
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.81 E-value=1.1e-18 Score=119.75 Aligned_cols=92 Identities=23% Similarity=0.256 Sum_probs=77.9
Q ss_pred cCCCEEEEecCCC--chHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 11 LKGMTALVTGGTR--GIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 11 ~~~~~~litG~~~--~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
+++|+++|||+++ |||.++++.|+++|++|++++|+ ++.++..+++........++.||++|+++++++++++.+++
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 82 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW 82 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence 6789999999986 99999999999999999998887 34445555555443456788999999999999999999999
Q ss_pred CCCCcEEEEcCCCCCc
Q 033299 89 DGKLNILVSSSAKVPF 104 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~ 104 (122)
|++|++|||||+...
T Consensus 83 -g~iD~linnAg~~~~ 97 (262)
T PRK07984 83 -PKFDGFVHSIGFAPG 97 (262)
T ss_pred -CCCCEEEECCccCCc
Confidence 899999999998643
No 40
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.81 E-value=1.3e-18 Score=120.09 Aligned_cols=92 Identities=24% Similarity=0.310 Sum_probs=75.4
Q ss_pred cccCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHh-cCCeEEEEeecCCCHHHHHHHHHHHH
Q 033299 9 WSLKGMTALVTGGT--RGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKS-KGLKVSGSACDLKIRAERQKLMETVC 85 (122)
Q Consensus 9 ~~~~~~~~litG~~--~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~ 85 (122)
|.+.+|+++|||++ +|||+++++.|+++|++|++++|+.+ ..+..+++.. .+.. .++.+|++|+++++++++++.
T Consensus 1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~ 78 (274)
T PRK08415 1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLK 78 (274)
T ss_pred CccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHH
Confidence 34678999999997 79999999999999999999999853 2223333322 2333 678999999999999999999
Q ss_pred HHcCCCCcEEEEcCCCCC
Q 033299 86 SEFDGKLNILVSSSAKVP 103 (122)
Q Consensus 86 ~~~~g~id~lv~~ag~~~ 103 (122)
+++ |++|+||||||+..
T Consensus 79 ~~~-g~iDilVnnAG~~~ 95 (274)
T PRK08415 79 KDL-GKIDFIVHSVAFAP 95 (274)
T ss_pred HHc-CCCCEEEECCccCc
Confidence 999 89999999999864
No 41
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.80 E-value=1.3e-18 Score=118.13 Aligned_cols=95 Identities=27% Similarity=0.366 Sum_probs=85.8
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
+.+++|+++|||++++||.+++++|+++|++|++++|+.+..++..+++...+.++.++.+|+++++++.++++++.+.+
T Consensus 3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 82 (253)
T PRK06172 3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY 82 (253)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 45778999999999999999999999999999999999888877777776666678999999999999999999999998
Q ss_pred CCCCcEEEEcCCCCCc
Q 033299 89 DGKLNILVSSSAKVPF 104 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~ 104 (122)
+++|++|||+|....
T Consensus 83 -g~id~li~~ag~~~~ 97 (253)
T PRK06172 83 -GRLDYAFNNAGIEIE 97 (253)
T ss_pred -CCCCEEEECCCCCCC
Confidence 899999999998643
No 42
>PRK08643 acetoin reductase; Validated
Probab=99.80 E-value=1.7e-18 Score=117.77 Aligned_cols=93 Identities=28% Similarity=0.362 Sum_probs=83.7
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCC
Q 033299 13 GMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKL 92 (122)
Q Consensus 13 ~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~i 92 (122)
+|+++|||++++||.++++.|+++|++|++++|+.+..++...++...+.++.++.+|+++++++.++++++.+++ +++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i 80 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTF-GDL 80 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-CCC
Confidence 6899999999999999999999999999999999888777777776656678899999999999999999999998 899
Q ss_pred cEEEEcCCCCCcch
Q 033299 93 NILVSSSAKVPFEL 106 (122)
Q Consensus 93 d~lv~~ag~~~~~~ 106 (122)
|++|||||+....+
T Consensus 81 d~vi~~ag~~~~~~ 94 (256)
T PRK08643 81 NVVVNNAGVAPTTP 94 (256)
T ss_pred CEEEECCCCCCCCC
Confidence 99999999875443
No 43
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.80 E-value=1.4e-18 Score=119.02 Aligned_cols=93 Identities=23% Similarity=0.245 Sum_probs=76.8
Q ss_pred ccCCCEEEEecC--CCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 10 SLKGMTALVTGG--TRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 10 ~~~~~~~litG~--~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
++++|+++|||+ ++|||.++++.|+++|++|++++|+. +..+..+++.........+.||++|+++++++++++.++
T Consensus 3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (261)
T PRK08690 3 FLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKH 81 (261)
T ss_pred ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHH
Confidence 367899999997 67999999999999999999988763 333444455433234567899999999999999999999
Q ss_pred cCCCCcEEEEcCCCCCc
Q 033299 88 FDGKLNILVSSSAKVPF 104 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~~ 104 (122)
+ +++|++|||||+...
T Consensus 82 ~-g~iD~lVnnAG~~~~ 97 (261)
T PRK08690 82 W-DGLDGLVHSIGFAPK 97 (261)
T ss_pred h-CCCcEEEECCccCCc
Confidence 9 899999999999753
No 44
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.80 E-value=1.8e-18 Score=120.68 Aligned_cols=97 Identities=21% Similarity=0.250 Sum_probs=84.8
Q ss_pred cccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhc--CCeEEEEeecCCCHHHHHHHHHHH
Q 033299 7 QRWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSK--GLKVSGSACDLKIRAERQKLMETV 84 (122)
Q Consensus 7 ~~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~ 84 (122)
.+.++++|+++|||+++|||.++++.|+++|++|++++|+.+..++..+++... +.++.++.+|++|.++++++++++
T Consensus 10 ~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~ 89 (306)
T PRK06197 10 DIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADAL 89 (306)
T ss_pred ccccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHH
Confidence 356788999999999999999999999999999999999988777666666543 346888999999999999999999
Q ss_pred HHHcCCCCcEEEEcCCCCCc
Q 033299 85 CSEFDGKLNILVSSSAKVPF 104 (122)
Q Consensus 85 ~~~~~g~id~lv~~ag~~~~ 104 (122)
.+.+ +++|+||||||+...
T Consensus 90 ~~~~-~~iD~li~nAg~~~~ 108 (306)
T PRK06197 90 RAAY-PRIDLLINNAGVMYT 108 (306)
T ss_pred HhhC-CCCCEEEECCccccC
Confidence 9988 899999999998643
No 45
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.80 E-value=2e-18 Score=117.50 Aligned_cols=96 Identities=32% Similarity=0.407 Sum_probs=86.0
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
.+++|+++|||++|+||.++++.|+++|++|++++|+++...+..+++...+.++.++.+|+++.+++.++++.+.+.+
T Consensus 4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 82 (262)
T PRK13394 4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERF- 82 (262)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 4668999999999999999999999999999999999988888887776666678899999999999999999998888
Q ss_pred CCCcEEEEcCCCCCcch
Q 033299 90 GKLNILVSSSAKVPFEL 106 (122)
Q Consensus 90 g~id~lv~~ag~~~~~~ 106 (122)
+++|+||||||......
T Consensus 83 ~~~d~vi~~ag~~~~~~ 99 (262)
T PRK13394 83 GSVDILVSNAGIQIVNP 99 (262)
T ss_pred CCCCEEEECCccCCCCc
Confidence 89999999999875443
No 46
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.80 E-value=2e-18 Score=118.08 Aligned_cols=92 Identities=28% Similarity=0.329 Sum_probs=80.9
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
.++++|+++|||+++|||.+++++|+++|++|++++|+.+..++..+++ +.++.++.+|+++++++.++++++.+.+
T Consensus 2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (261)
T PRK08265 2 IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL---GERARFIATDITDDAAIERAVATVVARF 78 (261)
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCeeEEEEecCCCHHHHHHHHHHHHHHh
Confidence 3467899999999999999999999999999999999987766655544 3468899999999999999999999999
Q ss_pred CCCCcEEEEcCCCCCc
Q 033299 89 DGKLNILVSSSAKVPF 104 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~ 104 (122)
+++|++|||||....
T Consensus 79 -g~id~lv~~ag~~~~ 93 (261)
T PRK08265 79 -GRVDILVNLACTYLD 93 (261)
T ss_pred -CCCCEEEECCCCCCC
Confidence 899999999998643
No 47
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.80 E-value=1.7e-18 Score=121.61 Aligned_cols=94 Identities=19% Similarity=0.103 Sum_probs=82.1
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
+.+.+|+++|||+++|||.++++.|+++|++|++++|+.++.++..+++...+.++.++.+|+++.+++.++++++.+.+
T Consensus 2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (322)
T PRK07453 2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALG 81 (322)
T ss_pred CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence 45678999999999999999999999999999999999888877777765444568899999999999999999977666
Q ss_pred CCCCcEEEEcCCCCC
Q 033299 89 DGKLNILVSSSAKVP 103 (122)
Q Consensus 89 ~g~id~lv~~ag~~~ 103 (122)
+++|+||||||+..
T Consensus 82 -~~iD~li~nAg~~~ 95 (322)
T PRK07453 82 -KPLDALVCNAAVYM 95 (322)
T ss_pred -CCccEEEECCcccC
Confidence 78999999999864
No 48
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=99.80 E-value=9.3e-19 Score=119.65 Aligned_cols=94 Identities=29% Similarity=0.352 Sum_probs=77.9
Q ss_pred cccCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEeecChh--HHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHH
Q 033299 9 WSLKGMTALVTGGT--RGIGHAIVEELTAFGAIVHTCSRNET--ELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETV 84 (122)
Q Consensus 9 ~~~~~~~~litG~~--~~ig~~~~~~l~~~g~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~ 84 (122)
+++++|+++|||++ +|||.+++++|+++|++|+++.|+.+ +.++..+++.....+..++.+|++|+++++++++++
T Consensus 2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~ 81 (258)
T PRK07370 2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETI 81 (258)
T ss_pred cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHH
Confidence 45789999999986 89999999999999999988876532 334445555444445778899999999999999999
Q ss_pred HHHcCCCCcEEEEcCCCCC
Q 033299 85 CSEFDGKLNILVSSSAKVP 103 (122)
Q Consensus 85 ~~~~~g~id~lv~~ag~~~ 103 (122)
.+++ |++|++|||||+..
T Consensus 82 ~~~~-g~iD~lv~nag~~~ 99 (258)
T PRK07370 82 KQKW-GKLDILVHCLAFAG 99 (258)
T ss_pred HHHc-CCCCEEEEcccccC
Confidence 9999 89999999999864
No 49
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.80 E-value=2.4e-18 Score=117.03 Aligned_cols=94 Identities=24% Similarity=0.369 Sum_probs=84.5
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
.+.+|+++|||++++||.+++++|+++|++|++++|+.+..++...++...+.++.++.+|++++++++++++++.+.+
T Consensus 2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 80 (258)
T PRK07890 2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERF- 80 (258)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHc-
Confidence 4568999999999999999999999999999999999888777777776556678899999999999999999999999
Q ss_pred CCCcEEEEcCCCCCc
Q 033299 90 GKLNILVSSSAKVPF 104 (122)
Q Consensus 90 g~id~lv~~ag~~~~ 104 (122)
+++|++|||||....
T Consensus 81 g~~d~vi~~ag~~~~ 95 (258)
T PRK07890 81 GRVDALVNNAFRVPS 95 (258)
T ss_pred CCccEEEECCccCCC
Confidence 899999999998643
No 50
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.80 E-value=2.9e-18 Score=116.38 Aligned_cols=95 Identities=33% Similarity=0.445 Sum_probs=85.9
Q ss_pred ccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 8 RWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 8 ~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
++++++|+++|||++++||.+++++|+++|++|++++|+.+..++..+++...+.+..++.+|+++.++++++++++.+.
T Consensus 3 ~~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (252)
T PRK07035 3 LFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRER 82 (252)
T ss_pred ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35688999999999999999999999999999999999988888888877766667888999999999999999999999
Q ss_pred cCCCCcEEEEcCCCCC
Q 033299 88 FDGKLNILVSSSAKVP 103 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~ 103 (122)
+ +++|++|||||...
T Consensus 83 ~-~~id~li~~ag~~~ 97 (252)
T PRK07035 83 H-GRLDILVNNAAANP 97 (252)
T ss_pred c-CCCCEEEECCCcCC
Confidence 9 89999999999753
No 51
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.80 E-value=2.9e-18 Score=116.16 Aligned_cols=96 Identities=23% Similarity=0.282 Sum_probs=83.9
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
|.+++|+++|||++|+||.+++++|+++|++|++++|+.+...+...++. .+.++.++.+|++|+++++++++++.+++
T Consensus 1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~ 79 (252)
T PRK06138 1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARW 79 (252)
T ss_pred CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 34678999999999999999999999999999999999877766666554 34568899999999999999999999998
Q ss_pred CCCCcEEEEcCCCCCcch
Q 033299 89 DGKLNILVSSSAKVPFEL 106 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~~ 106 (122)
+++|+|||++|......
T Consensus 80 -~~id~vi~~ag~~~~~~ 96 (252)
T PRK06138 80 -GRLDVLVNNAGFGCGGT 96 (252)
T ss_pred -CCCCEEEECCCCCCCCC
Confidence 89999999999875543
No 52
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.80 E-value=2.1e-18 Score=117.84 Aligned_cols=94 Identities=19% Similarity=0.239 Sum_probs=76.6
Q ss_pred ccccCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHH
Q 033299 8 RWSLKGMTALVTGGT--RGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVC 85 (122)
Q Consensus 8 ~~~~~~~~~litG~~--~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~ 85 (122)
.+++++|+++|||++ +|||.+++++|+++|++|++++|+.+..+ ..+++........++.||++|+++++++++++.
T Consensus 5 ~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 83 (258)
T PRK07533 5 LLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YVEPLAEELDAPIFLPLDVREPGQLEAVFARIA 83 (258)
T ss_pred ccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HHHHHHHhhccceEEecCcCCHHHHHHHHHHHH
Confidence 456789999999998 59999999999999999999998854322 222332221235678999999999999999999
Q ss_pred HHcCCCCcEEEEcCCCCC
Q 033299 86 SEFDGKLNILVSSSAKVP 103 (122)
Q Consensus 86 ~~~~g~id~lv~~ag~~~ 103 (122)
+++ |++|++|||||+..
T Consensus 84 ~~~-g~ld~lv~nAg~~~ 100 (258)
T PRK07533 84 EEW-GRLDFLLHSIAFAP 100 (258)
T ss_pred HHc-CCCCEEEEcCccCC
Confidence 999 89999999999864
No 53
>PRK09242 tropinone reductase; Provisional
Probab=99.80 E-value=3.3e-18 Score=116.49 Aligned_cols=97 Identities=32% Similarity=0.501 Sum_probs=86.4
Q ss_pred ccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhc--CCeEEEEeecCCCHHHHHHHHHHHH
Q 033299 8 RWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSK--GLKVSGSACDLKIRAERQKLMETVC 85 (122)
Q Consensus 8 ~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~ 85 (122)
++.+++|+++|||++++||.+++++|+++|++|++++|+.+..++..+++... +.++.++.+|+++++++.++++++.
T Consensus 4 ~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 83 (257)
T PRK09242 4 RWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVE 83 (257)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 45688999999999999999999999999999999999988888777777654 4578899999999999999999999
Q ss_pred HHcCCCCcEEEEcCCCCCcc
Q 033299 86 SEFDGKLNILVSSSAKVPFE 105 (122)
Q Consensus 86 ~~~~g~id~lv~~ag~~~~~ 105 (122)
+.+ +++|+|||++|.....
T Consensus 84 ~~~-g~id~li~~ag~~~~~ 102 (257)
T PRK09242 84 DHW-DGLHILVNNAGGNIRK 102 (257)
T ss_pred HHc-CCCCEEEECCCCCCCC
Confidence 999 8999999999986443
No 54
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=99.80 E-value=8.6e-19 Score=115.87 Aligned_cols=97 Identities=26% Similarity=0.385 Sum_probs=83.4
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhc--CCeEEEEeecCCCHHHHHHHHHHHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSK--GLKVSGSACDLKIRAERQKLMETVCS 86 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~ 86 (122)
|+++||.+++||+.||||+++++.|+.+|..+.++..+.+..+ ...+++.. ...+.|++|||++..++.+.++++..
T Consensus 1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~-a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~ 79 (261)
T KOG4169|consen 1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPE-AIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA 79 (261)
T ss_pred CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHH-HHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence 4678999999999999999999999999988777776666644 34455544 34699999999999999999999999
Q ss_pred HcCCCCcEEEEcCCCCCcchh
Q 033299 87 EFDGKLNILVSSSAKVPFELL 107 (122)
Q Consensus 87 ~~~g~id~lv~~ag~~~~~~~ 107 (122)
++ |.||++||+||++.++.+
T Consensus 80 ~f-g~iDIlINgAGi~~dkd~ 99 (261)
T KOG4169|consen 80 TF-GTIDILINGAGILDDKDW 99 (261)
T ss_pred Hh-CceEEEEcccccccchhH
Confidence 99 999999999999987765
No 55
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.80 E-value=3.5e-18 Score=115.69 Aligned_cols=95 Identities=23% Similarity=0.283 Sum_probs=83.4
Q ss_pred ccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 8 RWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 8 ~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
|+.+++|+++|||++|+||.+++++|+++|++|++++|+.+......+++...+.++.++.+|+++.+++.+++.++.++
T Consensus 1 ~~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (250)
T PRK07774 1 MGRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSA 80 (250)
T ss_pred CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 34567899999999999999999999999999999999987766666666554556788999999999999999999999
Q ss_pred cCCCCcEEEEcCCCCC
Q 033299 88 FDGKLNILVSSSAKVP 103 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~ 103 (122)
+ +++|+||||||+..
T Consensus 81 ~-~~id~vi~~ag~~~ 95 (250)
T PRK07774 81 F-GGIDYLVNNAAIYG 95 (250)
T ss_pred h-CCCCEEEECCCCcC
Confidence 8 78999999999864
No 56
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.80 E-value=2.1e-18 Score=118.48 Aligned_cols=94 Identities=29% Similarity=0.461 Sum_probs=82.0
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
++++++++|||++||||.++++.|+++|++|++++|+.+...+...++. ++.++.+|+++++++.++++++.+.+
T Consensus 2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~- 76 (273)
T PRK07825 2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----LVVGGPLDVTDPASFAAFLDAVEADL- 76 (273)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----cceEEEccCCCHHHHHHHHHHHHHHc-
Confidence 5678999999999999999999999999999999999887766655543 47788999999999999999999998
Q ss_pred CCCcEEEEcCCCCCcchhh
Q 033299 90 GKLNILVSSSAKVPFELLI 108 (122)
Q Consensus 90 g~id~lv~~ag~~~~~~~~ 108 (122)
+++|++|||||+.......
T Consensus 77 ~~id~li~~ag~~~~~~~~ 95 (273)
T PRK07825 77 GPIDVLVNNAGVMPVGPFL 95 (273)
T ss_pred CCCCEEEECCCcCCCCccc
Confidence 8999999999998655443
No 57
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.80 E-value=2.6e-18 Score=117.39 Aligned_cols=94 Identities=26% Similarity=0.422 Sum_probs=80.7
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeec-ChhHHHHHHHHHHhc-CCeEEEEeecCCCHHHHHHHHHHHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSR-NETELNERIQEWKSK-GLKVSGSACDLKIRAERQKLMETVCS 86 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~ 86 (122)
..+++|+++|||+++|||.++++.|+++|++|++++| +.+..+...+++... +.++.++.+|++|+++++++++++.+
T Consensus 4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (260)
T PRK08416 4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDE 83 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999988764 556666666666543 45788999999999999999999999
Q ss_pred HcCCCCcEEEEcCCCCC
Q 033299 87 EFDGKLNILVSSSAKVP 103 (122)
Q Consensus 87 ~~~g~id~lv~~ag~~~ 103 (122)
.+ +++|++|||||+..
T Consensus 84 ~~-g~id~lv~nAg~~~ 99 (260)
T PRK08416 84 DF-DRVDFFISNAIISG 99 (260)
T ss_pred hc-CCccEEEECccccc
Confidence 99 89999999999753
No 58
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.79 E-value=3.1e-18 Score=116.61 Aligned_cols=94 Identities=28% Similarity=0.332 Sum_probs=83.5
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
+++++|+++|||++++||.+++++|+++|++|++++|+.+.. +..+++...+.++.++.+|+++++++.++++++.+.+
T Consensus 3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK08628 3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF 81 (258)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 468899999999999999999999999999999999987766 5666666666678999999999999999999999998
Q ss_pred CCCCcEEEEcCCCCCc
Q 033299 89 DGKLNILVSSSAKVPF 104 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~ 104 (122)
+++|++|||||....
T Consensus 82 -~~id~vi~~ag~~~~ 96 (258)
T PRK08628 82 -GRIDGLVNNAGVNDG 96 (258)
T ss_pred -CCCCEEEECCcccCC
Confidence 899999999997644
No 59
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.79 E-value=5e-18 Score=114.56 Aligned_cols=94 Identities=21% Similarity=0.272 Sum_probs=83.5
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
++|+++|||++++||.+++++|+++|++|++++|+.+...+..+.+...+.++.++.+|+++++++.++++.+.+++ ++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 83 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQF-GC 83 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence 45799999999999999999999999999999999887777777776555678899999999999999999999998 89
Q ss_pred CcEEEEcCCCCCcch
Q 033299 92 LNILVSSSAKVPFEL 106 (122)
Q Consensus 92 id~lv~~ag~~~~~~ 106 (122)
+|++|||+|.....+
T Consensus 84 id~lv~~ag~~~~~~ 98 (241)
T PRK07454 84 PDVLINNAGMAYTGP 98 (241)
T ss_pred CCEEEECCCccCCCc
Confidence 999999999876543
No 60
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.79 E-value=2.5e-18 Score=118.36 Aligned_cols=91 Identities=20% Similarity=0.241 Sum_probs=74.7
Q ss_pred cCCCEEEEecCCC--chHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 11 LKGMTALVTGGTR--GIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 11 ~~~~~~litG~~~--~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
+++|++||||+++ |||.++++.|+++|++|++++|+....+. .+++........++.+|++|+++++++++++.+++
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~ 83 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKW 83 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 6789999999996 99999999999999999999987543322 33332221223578999999999999999999999
Q ss_pred CCCCcEEEEcCCCCC
Q 033299 89 DGKLNILVSSSAKVP 103 (122)
Q Consensus 89 ~g~id~lv~~ag~~~ 103 (122)
|++|+||||||+..
T Consensus 84 -g~iD~lVnnAG~~~ 97 (271)
T PRK06505 84 -GKLDFVVHAIGFSD 97 (271)
T ss_pred -CCCCEEEECCccCC
Confidence 89999999999864
No 61
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.79 E-value=4.4e-18 Score=116.14 Aligned_cols=96 Identities=22% Similarity=0.326 Sum_probs=81.7
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
.++.+|+++|||++++||.+++++|+++|++|++++|+.. ..+..+++...+.++.++.+|+++++++++++.++.+++
T Consensus 2 ~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 80 (263)
T PRK08226 2 GKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE 80 (263)
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3567899999999999999999999999999999999864 334445554445578889999999999999999999998
Q ss_pred CCCCcEEEEcCCCCCcch
Q 033299 89 DGKLNILVSSSAKVPFEL 106 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~~ 106 (122)
+++|++|||||......
T Consensus 81 -~~id~vi~~ag~~~~~~ 97 (263)
T PRK08226 81 -GRIDILVNNAGVCRLGS 97 (263)
T ss_pred -CCCCEEEECCCcCCCCC
Confidence 89999999999875543
No 62
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.79 E-value=3.9e-18 Score=116.53 Aligned_cols=91 Identities=33% Similarity=0.431 Sum_probs=80.3
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
+.+++|+++|||+++|||.+++++|+++|++|++++|+.+..++..+++ +.++.++.+|++++++++++++++.+.+
T Consensus 2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06200 2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDAF 78 (263)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHhc
Confidence 4467899999999999999999999999999999999987776655544 3457889999999999999999999998
Q ss_pred CCCCcEEEEcCCCCC
Q 033299 89 DGKLNILVSSSAKVP 103 (122)
Q Consensus 89 ~g~id~lv~~ag~~~ 103 (122)
+++|++|||||+..
T Consensus 79 -g~id~li~~ag~~~ 92 (263)
T PRK06200 79 -GKLDCFVGNAGIWD 92 (263)
T ss_pred -CCCCEEEECCCCcc
Confidence 89999999999864
No 63
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.79 E-value=5.8e-18 Score=115.40 Aligned_cols=97 Identities=34% Similarity=0.463 Sum_probs=85.9
Q ss_pred ccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 8 RWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 8 ~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
..++++|+++|||++|+||.+++++|+++|++|++++|+.++.+...+++...+.++.++.||++|+++++++++++.+.
T Consensus 7 ~~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~ 86 (259)
T PRK08213 7 LFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLER 86 (259)
T ss_pred hhCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999999988877777777666667889999999999999999999998
Q ss_pred cCCCCcEEEEcCCCCCcc
Q 033299 88 FDGKLNILVSSSAKVPFE 105 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~~~ 105 (122)
+ +++|++|||||.....
T Consensus 87 ~-~~id~vi~~ag~~~~~ 103 (259)
T PRK08213 87 F-GHVDILVNNAGATWGA 103 (259)
T ss_pred h-CCCCEEEECCCCCCCC
Confidence 8 7999999999986443
No 64
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.79 E-value=6.4e-18 Score=114.27 Aligned_cols=96 Identities=29% Similarity=0.366 Sum_probs=85.6
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
.+++|+++|||++|+||.++++.|+++|++|++++|+.++.++..++++..+.++.++.+|+++++++.++++++.+.+
T Consensus 4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 82 (250)
T PRK12939 4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAAL- 82 (250)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence 4668999999999999999999999999999999999888887777776656678999999999999999999999998
Q ss_pred CCCcEEEEcCCCCCcch
Q 033299 90 GKLNILVSSSAKVPFEL 106 (122)
Q Consensus 90 g~id~lv~~ag~~~~~~ 106 (122)
+++|++|||+|......
T Consensus 83 ~~id~vi~~ag~~~~~~ 99 (250)
T PRK12939 83 GGLDGLVNNAGITNSKS 99 (250)
T ss_pred CCCCEEEECCCCCCCCC
Confidence 89999999999876543
No 65
>PRK05599 hypothetical protein; Provisional
Probab=99.79 E-value=3.7e-18 Score=115.92 Aligned_cols=90 Identities=19% Similarity=0.228 Sum_probs=80.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCC-eEEEEeecCCCHHHHHHHHHHHHHHcCCCC
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGL-KVSGSACDLKIRAERQKLMETVCSEFDGKL 92 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~i 92 (122)
++++|||+++|||.+++++|+ +|++|++++|+.+++++..++++..+. ++.++.||++|+++++++++++.+.+ |++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~i 78 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELA-GEI 78 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhc-CCC
Confidence 478999999999999999998 599999999999988888888876554 47889999999999999999999988 899
Q ss_pred cEEEEcCCCCCcc
Q 033299 93 NILVSSSAKVPFE 105 (122)
Q Consensus 93 d~lv~~ag~~~~~ 105 (122)
|++|||||+....
T Consensus 79 d~lv~nag~~~~~ 91 (246)
T PRK05599 79 SLAVVAFGILGDQ 91 (246)
T ss_pred CEEEEecCcCCCc
Confidence 9999999987543
No 66
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.79 E-value=3.9e-18 Score=115.88 Aligned_cols=91 Identities=24% Similarity=0.377 Sum_probs=81.5
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCC
Q 033299 13 GMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKL 92 (122)
Q Consensus 13 ~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~i 92 (122)
+|+++|||+++|||.++++.|+++|++|++++|+.+..++..+++...+.++.++.+|++++++++++++++.+.+ +++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 79 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKF-GRI 79 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CCc
Confidence 5799999999999999999999999999999999887777777776555678899999999999999999999999 899
Q ss_pred cEEEEcCCCCCc
Q 033299 93 NILVSSSAKVPF 104 (122)
Q Consensus 93 d~lv~~ag~~~~ 104 (122)
|++|||+|....
T Consensus 80 d~lI~~ag~~~~ 91 (252)
T PRK07677 80 DALINNAAGNFI 91 (252)
T ss_pred cEEEECCCCCCC
Confidence 999999997543
No 67
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.79 E-value=3.6e-18 Score=116.72 Aligned_cols=92 Identities=26% Similarity=0.276 Sum_probs=77.2
Q ss_pred cccCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEeecCh---hHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHH
Q 033299 9 WSLKGMTALVTGGT--RGIGHAIVEELTAFGAIVHTCSRNE---TELNERIQEWKSKGLKVSGSACDLKIRAERQKLMET 83 (122)
Q Consensus 9 ~~~~~~~~litG~~--~~ig~~~~~~l~~~g~~v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~ 83 (122)
+++.+|+++|||++ +|||.++++.|+++|++|++++|+. +.++++.+++. +.++.++.+|++|++++++++++
T Consensus 3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~ 80 (257)
T PRK08594 3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQESLLLPCDVTSDEEITACFET 80 (257)
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CCceEEEecCCCCHHHHHHHHHH
Confidence 46789999999997 8999999999999999999987753 33444433332 35688899999999999999999
Q ss_pred HHHHcCCCCcEEEEcCCCCC
Q 033299 84 VCSEFDGKLNILVSSSAKVP 103 (122)
Q Consensus 84 ~~~~~~g~id~lv~~ag~~~ 103 (122)
+.+++ |++|++|||||+..
T Consensus 81 ~~~~~-g~ld~lv~nag~~~ 99 (257)
T PRK08594 81 IKEEV-GVIHGVAHCIAFAN 99 (257)
T ss_pred HHHhC-CCccEEEECcccCC
Confidence 99999 89999999999864
No 68
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.79 E-value=4.8e-18 Score=116.10 Aligned_cols=90 Identities=30% Similarity=0.469 Sum_probs=78.6
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
++++|+++|||+++|||.+++++|+++|++|++++|+.+..+++.+. .+.++.++.+|+++.+++.++++++.+++
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 77 (262)
T TIGR03325 2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA---HGDAVVGVEGDVRSLDDHKEAVARCVAAF- 77 (262)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh---cCCceEEEEeccCCHHHHHHHHHHHHHHh-
Confidence 46789999999999999999999999999999999988766554332 23468889999999999999999999999
Q ss_pred CCCcEEEEcCCCCC
Q 033299 90 GKLNILVSSSAKVP 103 (122)
Q Consensus 90 g~id~lv~~ag~~~ 103 (122)
+++|+||||||+..
T Consensus 78 g~id~li~~Ag~~~ 91 (262)
T TIGR03325 78 GKIDCLIPNAGIWD 91 (262)
T ss_pred CCCCEEEECCCCCc
Confidence 89999999999853
No 69
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.79 E-value=7.4e-18 Score=114.59 Aligned_cols=98 Identities=27% Similarity=0.315 Sum_probs=86.8
Q ss_pred cccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHH
Q 033299 7 QRWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCS 86 (122)
Q Consensus 7 ~~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 86 (122)
+...+++|+++|||++|+||.++++.|+++|++|+++.|+.+++++...++...+.++.++.+|+++++++.++++++.+
T Consensus 3 ~~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (258)
T PRK06949 3 RSINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAET 82 (258)
T ss_pred cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 34557899999999999999999999999999999999998888877777765556788999999999999999999988
Q ss_pred HcCCCCcEEEEcCCCCCcc
Q 033299 87 EFDGKLNILVSSSAKVPFE 105 (122)
Q Consensus 87 ~~~g~id~lv~~ag~~~~~ 105 (122)
.+ +++|++|||+|.....
T Consensus 83 ~~-~~~d~li~~ag~~~~~ 100 (258)
T PRK06949 83 EA-GTIDILVNNSGVSTTQ 100 (258)
T ss_pred hc-CCCCEEEECCCCCCCC
Confidence 88 8999999999986543
No 70
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.79 E-value=5.2e-18 Score=115.49 Aligned_cols=94 Identities=24% Similarity=0.341 Sum_probs=82.0
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
|.+.+|+++|||++++||.++++.|+++|++|++++|+.+..++..+++ +.++.++.+|++|++++..+++++.+.+
T Consensus 2 ~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07067 2 MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI---GPAAIAVSLDVTRQDSIDRIVAAAVERF 78 (257)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4577899999999999999999999999999999999988776665544 2358889999999999999999999998
Q ss_pred CCCCcEEEEcCCCCCcch
Q 033299 89 DGKLNILVSSSAKVPFEL 106 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~~ 106 (122)
+++|++|||||.....+
T Consensus 79 -~~id~li~~ag~~~~~~ 95 (257)
T PRK07067 79 -GGIDILFNNAALFDMAP 95 (257)
T ss_pred -CCCCEEEECCCcCCCCC
Confidence 89999999999875443
No 71
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.78 E-value=6.4e-18 Score=115.02 Aligned_cols=95 Identities=27% Similarity=0.396 Sum_probs=80.1
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
+++++|+++|||+++|||.+++++|+++|++|++++++.. .+..+++...+.++..+.+|++|+++++++++++.+++
T Consensus 6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (253)
T PRK08993 6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEF 83 (253)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 4678999999999999999999999999999988876532 33444554445578899999999999999999999998
Q ss_pred CCCCcEEEEcCCCCCcch
Q 033299 89 DGKLNILVSSSAKVPFEL 106 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~~ 106 (122)
+++|++|||||+.....
T Consensus 84 -~~~D~li~~Ag~~~~~~ 100 (253)
T PRK08993 84 -GHIDILVNNAGLIRRED 100 (253)
T ss_pred -CCCCEEEECCCCCCCCC
Confidence 89999999999875443
No 72
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.78 E-value=6.8e-18 Score=114.29 Aligned_cols=96 Identities=26% Similarity=0.394 Sum_probs=83.4
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHCCCeEEE-eecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHT-CSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
+.+++++|||++++||.+++++|+++|++|++ ..|+.++.++..++++..+.++.++.+|++|++++.++++++.+.+
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 80 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEF- 80 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence 35689999999999999999999999999776 5788777777777777666778999999999999999999999998
Q ss_pred CCCcEEEEcCCCCCcchh
Q 033299 90 GKLNILVSSSAKVPFELL 107 (122)
Q Consensus 90 g~id~lv~~ag~~~~~~~ 107 (122)
+++|+||||||.....+.
T Consensus 81 ~~id~vi~~ag~~~~~~~ 98 (250)
T PRK08063 81 GRLDVFVNNAASGVLRPA 98 (250)
T ss_pred CCCCEEEECCCCCCCCCc
Confidence 899999999998765443
No 73
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.78 E-value=6.6e-18 Score=114.33 Aligned_cols=94 Identities=30% Similarity=0.426 Sum_probs=80.1
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
.+++|+++|||++++||.+++++|+++|++|++++|+.. .+..+.+...+.++.++.+|+++++++..+++++.+.+
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 78 (248)
T TIGR01832 2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEF- 78 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 478999999999999999999999999999999998752 33444444445578899999999999999999999888
Q ss_pred CCCcEEEEcCCCCCcch
Q 033299 90 GKLNILVSSSAKVPFEL 106 (122)
Q Consensus 90 g~id~lv~~ag~~~~~~ 106 (122)
+++|++|||||......
T Consensus 79 ~~~d~li~~ag~~~~~~ 95 (248)
T TIGR01832 79 GHIDILVNNAGIIRRAD 95 (248)
T ss_pred CCCCEEEECCCCCCCCC
Confidence 89999999999976543
No 74
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.78 E-value=8.2e-18 Score=113.37 Aligned_cols=95 Identities=32% Similarity=0.453 Sum_probs=84.4
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
.+++++++|||++++||.+++++|+++|++|++++|+.+..++...++...+.++.++.+|+++++++.++++++.+++
T Consensus 4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 82 (239)
T PRK07666 4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNEL- 82 (239)
T ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 3567899999999999999999999999999999999887777777776556678899999999999999999999998
Q ss_pred CCCcEEEEcCCCCCcc
Q 033299 90 GKLNILVSSSAKVPFE 105 (122)
Q Consensus 90 g~id~lv~~ag~~~~~ 105 (122)
+++|++||++|.....
T Consensus 83 ~~id~vi~~ag~~~~~ 98 (239)
T PRK07666 83 GSIDILINNAGISKFG 98 (239)
T ss_pred CCccEEEEcCccccCC
Confidence 8999999999987543
No 75
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.78 E-value=7.6e-18 Score=114.03 Aligned_cols=93 Identities=23% Similarity=0.343 Sum_probs=82.5
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhc--CCeEEEEeecCCCHHHHHHHHHHHHHHcCC
Q 033299 13 GMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSK--GLKVSGSACDLKIRAERQKLMETVCSEFDG 90 (122)
Q Consensus 13 ~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g 90 (122)
+|+++|||+++|||.+++++|+++|++|++++|+.+..++..+.+... +.++.++.+|+++++++.++++++.+.+ +
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 80 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDEL-G 80 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence 689999999999999999999999999999999988877776666543 4478899999999999999999999998 8
Q ss_pred CCcEEEEcCCCCCcch
Q 033299 91 KLNILVSSSAKVPFEL 106 (122)
Q Consensus 91 ~id~lv~~ag~~~~~~ 106 (122)
++|++|||||+.....
T Consensus 81 ~id~vi~~ag~~~~~~ 96 (248)
T PRK08251 81 GLDRVIVNAGIGKGAR 96 (248)
T ss_pred CCCEEEECCCcCCCCC
Confidence 9999999999876543
No 76
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.78 E-value=8.4e-18 Score=114.16 Aligned_cols=96 Identities=28% Similarity=0.347 Sum_probs=85.8
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCC
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDG 90 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g 90 (122)
+++|+++|||++++||.+++++|+++|++|++++|+.+..+...+++...+.++.++.||++++++++++++.+.+++ +
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~ 80 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETF-G 80 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence 457899999999999999999999999999999999888887777776666788999999999999999999999998 8
Q ss_pred CCcEEEEcCCCCCcchh
Q 033299 91 KLNILVSSSAKVPFELL 107 (122)
Q Consensus 91 ~id~lv~~ag~~~~~~~ 107 (122)
++|+||||||.......
T Consensus 81 ~~d~vi~~a~~~~~~~~ 97 (258)
T PRK12429 81 GVDILVNNAGIQHVAPI 97 (258)
T ss_pred CCCEEEECCCCCCCCCh
Confidence 99999999998765443
No 77
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.78 E-value=3e-18 Score=116.99 Aligned_cols=91 Identities=19% Similarity=0.105 Sum_probs=76.1
Q ss_pred ccCCCEEEEecC--CCchHHHHHHHHHHCCCeEEEeecCh--hHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHH
Q 033299 10 SLKGMTALVTGG--TRGIGHAIVEELTAFGAIVHTCSRNE--TELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVC 85 (122)
Q Consensus 10 ~~~~~~~litG~--~~~ig~~~~~~l~~~g~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~ 85 (122)
.+.+|+++|||+ ++|||.++++.|+++|++|++++|+. +..++..+++ +.++.++.+|++|+++++++++++.
T Consensus 4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~~~~~ 80 (256)
T PRK07889 4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL---PEPAPVLELDVTNEEHLASLADRVR 80 (256)
T ss_pred cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc---CCCCcEEeCCCCCHHHHHHHHHHHH
Confidence 467899999999 89999999999999999999998764 3333333333 2357789999999999999999999
Q ss_pred HHcCCCCcEEEEcCCCCCc
Q 033299 86 SEFDGKLNILVSSSAKVPF 104 (122)
Q Consensus 86 ~~~~g~id~lv~~ag~~~~ 104 (122)
+++ +++|++|||||+...
T Consensus 81 ~~~-g~iD~li~nAG~~~~ 98 (256)
T PRK07889 81 EHV-DGLDGVVHSIGFAPQ 98 (256)
T ss_pred HHc-CCCcEEEEccccccc
Confidence 998 899999999998743
No 78
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.78 E-value=6.2e-18 Score=115.72 Aligned_cols=92 Identities=21% Similarity=0.227 Sum_probs=75.4
Q ss_pred ccCCCEEEEecCCC--chHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 10 SLKGMTALVTGGTR--GIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 10 ~~~~~~~litG~~~--~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
.+++|+++|||+++ |||.++++.|+++|++|++++|+. ..++..+++........++.+|++|+++++++++++.++
T Consensus 5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (260)
T PRK06603 5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEK 83 (260)
T ss_pred ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHH
Confidence 45789999999997 999999999999999999988874 333444555433122346789999999999999999999
Q ss_pred cCCCCcEEEEcCCCCC
Q 033299 88 FDGKLNILVSSSAKVP 103 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~ 103 (122)
+ |++|+||||||+..
T Consensus 84 ~-g~iDilVnnag~~~ 98 (260)
T PRK06603 84 W-GSFDFLLHGMAFAD 98 (260)
T ss_pred c-CCccEEEEccccCC
Confidence 9 89999999999864
No 79
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.78 E-value=1.3e-17 Score=113.57 Aligned_cols=96 Identities=27% Similarity=0.380 Sum_probs=85.5
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
+++.+|+++|||++++||.++++.|+++|++|++++|+.+..+....++...+.++.++.+|+++.+++.+++.++.+.+
T Consensus 7 ~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 86 (255)
T PRK06113 7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKL 86 (255)
T ss_pred cCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46789999999999999999999999999999999999887777777776556678889999999999999999999988
Q ss_pred CCCCcEEEEcCCCCCcc
Q 033299 89 DGKLNILVSSSAKVPFE 105 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~ 105 (122)
+++|++|||||.....
T Consensus 87 -~~~d~li~~ag~~~~~ 102 (255)
T PRK06113 87 -GKVDILVNNAGGGGPK 102 (255)
T ss_pred -CCCCEEEECCCCCCCC
Confidence 8999999999986543
No 80
>PLN02253 xanthoxin dehydrogenase
Probab=99.78 E-value=7.7e-18 Score=116.01 Aligned_cols=93 Identities=26% Similarity=0.375 Sum_probs=81.6
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
..+++|+++|||+++|||.+++++|+++|++|++++|+.+..++..+++. .+.++.++.+|++|+++++++++.+.+++
T Consensus 14 ~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 92 (280)
T PLN02253 14 QRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG-GEPNVCFFHCDVTVEDDVSRAVDFTVDKF 92 (280)
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc-CCCceEEEEeecCCHHHHHHHHHHHHHHh
Confidence 45778999999999999999999999999999999998776666655553 23468899999999999999999999999
Q ss_pred CCCCcEEEEcCCCCC
Q 033299 89 DGKLNILVSSSAKVP 103 (122)
Q Consensus 89 ~g~id~lv~~ag~~~ 103 (122)
+++|+||||||...
T Consensus 93 -g~id~li~~Ag~~~ 106 (280)
T PLN02253 93 -GTLDIMVNNAGLTG 106 (280)
T ss_pred -CCCCEEEECCCcCC
Confidence 89999999999864
No 81
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.78 E-value=6.9e-18 Score=115.00 Aligned_cols=91 Identities=26% Similarity=0.415 Sum_probs=79.3
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
++++|+++|||+++|||.+++++|+++|++|++++|+.. ..+..+++...+.++.++.+|+++++++.++++++.+.+
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 82 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAF- 82 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHc-
Confidence 367899999999999999999999999999999999853 445555565556678899999999999999999999998
Q ss_pred CCCcEEEEcCCCC
Q 033299 90 GKLNILVSSSAKV 102 (122)
Q Consensus 90 g~id~lv~~ag~~ 102 (122)
+++|++|||||..
T Consensus 83 ~~id~lv~nAg~~ 95 (260)
T PRK12823 83 GRIDVLINNVGGT 95 (260)
T ss_pred CCCeEEEECCccc
Confidence 8999999999965
No 82
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.78 E-value=8.4e-18 Score=117.97 Aligned_cols=91 Identities=18% Similarity=0.136 Sum_probs=80.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCC-CeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFG-AIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDG 90 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g 90 (122)
++|+++|||+++|||.++++.|+++| ++|++++|+.++.++..+++...+.++.++.+|+++.++++++++++.+++ +
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~ 80 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESG-R 80 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhC-C
Confidence 47899999999999999999999999 999999999888777776665444567889999999999999999998888 8
Q ss_pred CCcEEEEcCCCCC
Q 033299 91 KLNILVSSSAKVP 103 (122)
Q Consensus 91 ~id~lv~~ag~~~ 103 (122)
++|++|||||+..
T Consensus 81 ~iD~lI~nAG~~~ 93 (314)
T TIGR01289 81 PLDALVCNAAVYF 93 (314)
T ss_pred CCCEEEECCCccc
Confidence 9999999999864
No 83
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.78 E-value=1e-17 Score=114.43 Aligned_cols=95 Identities=27% Similarity=0.384 Sum_probs=82.5
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
|.+++++++|||++++||.+++++|+++|++|++++|+.+...+...++ ..+.++.++.+|++|++++.++++.+.+ +
T Consensus 1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~ 78 (263)
T PRK09072 1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PYPGRHRWVVADLTSEAGREAVLARARE-M 78 (263)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHh-c
Confidence 3567899999999999999999999999999999999988877776666 3455788999999999999999998876 6
Q ss_pred CCCCcEEEEcCCCCCcch
Q 033299 89 DGKLNILVSSSAKVPFEL 106 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~~ 106 (122)
+++|++|||||.....+
T Consensus 79 -~~id~lv~~ag~~~~~~ 95 (263)
T PRK09072 79 -GGINVLINNAGVNHFAL 95 (263)
T ss_pred -CCCCEEEECCCCCCccc
Confidence 79999999999875543
No 84
>PRK06128 oxidoreductase; Provisional
Probab=99.78 E-value=7.5e-18 Score=117.42 Aligned_cols=94 Identities=32% Similarity=0.365 Sum_probs=80.1
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChh--HHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNET--ELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCS 86 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 86 (122)
..+++|++||||+++|||.++++.|+++|++|+++.++.+ ..++..+.+...+.++.++.||+++.++++++++++.+
T Consensus 51 ~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 130 (300)
T PRK06128 51 GRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVK 130 (300)
T ss_pred cccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 3577899999999999999999999999999988877543 34455555555566788999999999999999999999
Q ss_pred HcCCCCcEEEEcCCCCC
Q 033299 87 EFDGKLNILVSSSAKVP 103 (122)
Q Consensus 87 ~~~g~id~lv~~ag~~~ 103 (122)
.+ +++|+||||||...
T Consensus 131 ~~-g~iD~lV~nAg~~~ 146 (300)
T PRK06128 131 EL-GGLDILVNIAGKQT 146 (300)
T ss_pred Hh-CCCCEEEECCcccC
Confidence 99 89999999999863
No 85
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.78 E-value=1.4e-17 Score=113.70 Aligned_cols=97 Identities=25% Similarity=0.382 Sum_probs=82.9
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecC-hhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRN-ETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
.+++|+++|||++++||.++++.|+++|++|+++.|+ .+......+++...+.++.++.+|+++++++.++++++.+.+
T Consensus 4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~ 83 (261)
T PRK08936 4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF 83 (261)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4678999999999999999999999999999888875 445555666666556678899999999999999999999998
Q ss_pred CCCCcEEEEcCCCCCcchh
Q 033299 89 DGKLNILVSSSAKVPFELL 107 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~~~ 107 (122)
+++|++|||||.......
T Consensus 84 -g~id~lv~~ag~~~~~~~ 101 (261)
T PRK08936 84 -GTLDVMINNAGIENAVPS 101 (261)
T ss_pred -CCCCEEEECCCCCCCCCh
Confidence 899999999998765433
No 86
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.77 E-value=9e-18 Score=114.46 Aligned_cols=90 Identities=18% Similarity=0.252 Sum_probs=79.5
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCC
Q 033299 13 GMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKL 92 (122)
Q Consensus 13 ~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~i 92 (122)
+++++|||+++|||.+++++|+++|++|++++|+.+..++..+++...+ ++.++.+|+++++++.++++++.+++ +++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~-g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAH-GLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhC-CCC
Confidence 4789999999999999999999999999999999887776666554333 78899999999999999999999998 889
Q ss_pred cEEEEcCCCCCc
Q 033299 93 NILVSSSAKVPF 104 (122)
Q Consensus 93 d~lv~~ag~~~~ 104 (122)
|++|||||....
T Consensus 80 d~lv~~ag~~~~ 91 (257)
T PRK07024 80 DVVIANAGISVG 91 (257)
T ss_pred CEEEECCCcCCC
Confidence 999999998653
No 87
>PRK12743 oxidoreductase; Provisional
Probab=99.77 E-value=1.2e-17 Score=113.72 Aligned_cols=93 Identities=22% Similarity=0.306 Sum_probs=81.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeec-ChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSR-NETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDG 90 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g 90 (122)
++|+++|||++++||.+++++|+++|++|+++.+ +.+..+...+++...+.++.++.+|++++++++++++++.+++ +
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~ 79 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL-G 79 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence 3679999999999999999999999999988754 5566666667776667789999999999999999999999999 8
Q ss_pred CCcEEEEcCCCCCcc
Q 033299 91 KLNILVSSSAKVPFE 105 (122)
Q Consensus 91 ~id~lv~~ag~~~~~ 105 (122)
++|++|||+|.....
T Consensus 80 ~id~li~~ag~~~~~ 94 (256)
T PRK12743 80 RIDVLVNNAGAMTKA 94 (256)
T ss_pred CCCEEEECCCCCCCC
Confidence 999999999987644
No 88
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.77 E-value=1.1e-17 Score=114.09 Aligned_cols=87 Identities=32% Similarity=0.465 Sum_probs=78.8
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcE
Q 033299 15 TALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNI 94 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~ 94 (122)
.++|||+++|||.+++++|+++|++|++++|+.+..++..+++...+ ++.++.+|++|+++++++++++.+++ +++|+
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~-g~id~ 79 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-EVYAVKADLSDKDDLKNLVKEAWELL-GGIDA 79 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEcCCCCHHHHHHHHHHHHHhc-CCCCE
Confidence 68999999999999999999999999999999888887777776443 67889999999999999999999998 89999
Q ss_pred EEEcCCCCC
Q 033299 95 LVSSSAKVP 103 (122)
Q Consensus 95 lv~~ag~~~ 103 (122)
||||||...
T Consensus 80 li~naG~~~ 88 (259)
T PRK08340 80 LVWNAGNVR 88 (259)
T ss_pred EEECCCCCC
Confidence 999999854
No 89
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.77 E-value=7.7e-18 Score=114.46 Aligned_cols=89 Identities=34% Similarity=0.573 Sum_probs=77.4
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
+++++|+++|||+++|||.++++.|+++|++|++++|+.+. ...+.++.++.+|++++++++++++++.+.+
T Consensus 2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 73 (252)
T PRK07856 2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TVDGRPAEFHAADVRDPDQVAALVDAIVERH 73 (252)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------hhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999999999999998654 1123468889999999999999999999998
Q ss_pred CCCCcEEEEcCCCCCcch
Q 033299 89 DGKLNILVSSSAKVPFEL 106 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~~ 106 (122)
+++|++|||||+.....
T Consensus 74 -~~id~vi~~ag~~~~~~ 90 (252)
T PRK07856 74 -GRLDVLVNNAGGSPYAL 90 (252)
T ss_pred -CCCCEEEECCCCCCCCC
Confidence 89999999999875443
No 90
>PRK05717 oxidoreductase; Validated
Probab=99.77 E-value=1.3e-17 Score=113.55 Aligned_cols=92 Identities=28% Similarity=0.249 Sum_probs=79.7
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
..+++|+++|||++++||.++++.|+++|++|++++|+.++..+..+++ +.++.++.+|+++++++.++++++.+.+
T Consensus 6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (255)
T PRK05717 6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL---GENAWFIAMDVADEAQVAAGVAEVLGQF 82 (255)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4577999999999999999999999999999999998876655544333 3468889999999999999999999998
Q ss_pred CCCCcEEEEcCCCCCc
Q 033299 89 DGKLNILVSSSAKVPF 104 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~ 104 (122)
+++|++|||||+...
T Consensus 83 -g~id~li~~ag~~~~ 97 (255)
T PRK05717 83 -GRLDALVCNAAIADP 97 (255)
T ss_pred -CCCCEEEECCCcccC
Confidence 899999999998743
No 91
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.77 E-value=1.5e-17 Score=112.55 Aligned_cols=93 Identities=29% Similarity=0.396 Sum_probs=80.3
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
++++|+++|||++++||.++++.|+++|++|++++|+.+...+..+++ +.++.++.+|+++.+.+..+++.+.+.+
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 78 (249)
T PRK06500 3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GESALVIRADAGDVAAQKALAQALAEAF- 78 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh-
Confidence 467899999999999999999999999999999999876665554443 4468889999999999999999999988
Q ss_pred CCCcEEEEcCCCCCcch
Q 033299 90 GKLNILVSSSAKVPFEL 106 (122)
Q Consensus 90 g~id~lv~~ag~~~~~~ 106 (122)
+++|++|||||.....+
T Consensus 79 ~~id~vi~~ag~~~~~~ 95 (249)
T PRK06500 79 GRLDAVFINAGVAKFAP 95 (249)
T ss_pred CCCCEEEECCCCCCCCC
Confidence 89999999999875443
No 92
>PRK06398 aldose dehydrogenase; Validated
Probab=99.77 E-value=3.6e-18 Score=116.65 Aligned_cols=87 Identities=29% Similarity=0.432 Sum_probs=76.1
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
.++++|+++|||+++|||.+++++|+++|++|++++|+.... .++.++.||++++++++++++++.+++
T Consensus 2 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-----------~~~~~~~~D~~~~~~i~~~~~~~~~~~ 70 (258)
T PRK06398 2 LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-----------NDVDYFKVDVSNKEQVIKGIDYVISKY 70 (258)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-----------CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 357789999999999999999999999999999999875431 157789999999999999999999999
Q ss_pred CCCCcEEEEcCCCCCcchh
Q 033299 89 DGKLNILVSSSAKVPFELL 107 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~~~ 107 (122)
+++|+||||||+....+.
T Consensus 71 -~~id~li~~Ag~~~~~~~ 88 (258)
T PRK06398 71 -GRIDILVNNAGIESYGAI 88 (258)
T ss_pred -CCCCEEEECCCCCCCCCc
Confidence 899999999998755443
No 93
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.77 E-value=1.9e-17 Score=112.81 Aligned_cols=95 Identities=26% Similarity=0.352 Sum_probs=80.4
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeec-ChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSR-NETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
...+|+++|||++++||.+++++|+++|++|+++.+ +.+..+....++...+.++.++.+|++|++++.++++++.+.+
T Consensus 6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 85 (258)
T PRK09134 6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAAL 85 (258)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 456889999999999999999999999999887665 4455556666665556678899999999999999999999888
Q ss_pred CCCCcEEEEcCCCCCcc
Q 033299 89 DGKLNILVSSSAKVPFE 105 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~ 105 (122)
+++|+||||||.....
T Consensus 86 -~~iD~vi~~ag~~~~~ 101 (258)
T PRK09134 86 -GPITLLVNNASLFEYD 101 (258)
T ss_pred -CCCCEEEECCcCCCCC
Confidence 8999999999987554
No 94
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.77 E-value=2.1e-17 Score=111.75 Aligned_cols=92 Identities=29% Similarity=0.424 Sum_probs=82.1
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
++++++++|||++|+||.+++++|+++|++|++++|+.+..++....+.. +.++.++.+|++++++++++++++.+.+
T Consensus 2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 79 (251)
T PRK07231 2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERF- 79 (251)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHh-
Confidence 46789999999999999999999999999999999998877776666644 4568899999999999999999998888
Q ss_pred CCCcEEEEcCCCCC
Q 033299 90 GKLNILVSSSAKVP 103 (122)
Q Consensus 90 g~id~lv~~ag~~~ 103 (122)
+++|+|||++|...
T Consensus 80 ~~~d~vi~~ag~~~ 93 (251)
T PRK07231 80 GSVDILVNNAGTTH 93 (251)
T ss_pred CCCCEEEECCCCCC
Confidence 89999999999854
No 95
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.77 E-value=1.3e-17 Score=114.85 Aligned_cols=92 Identities=22% Similarity=0.320 Sum_probs=74.7
Q ss_pred ccCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 10 SLKGMTALVTGGT--RGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 10 ~~~~~~~litG~~--~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
.+++|+++|||++ +|||.++++.|+++|++|++++|+.. ..+..+++...-....++.+|++|+++++++++++.++
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 85 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK 85 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence 4578999999997 89999999999999999999888632 22233333322123557899999999999999999999
Q ss_pred cCCCCcEEEEcCCCCC
Q 033299 88 FDGKLNILVSSSAKVP 103 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~ 103 (122)
+ |++|++|||||+..
T Consensus 86 ~-g~iD~lv~nAG~~~ 100 (272)
T PRK08159 86 W-GKLDFVVHAIGFSD 100 (272)
T ss_pred c-CCCcEEEECCcccC
Confidence 9 89999999999875
No 96
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.77 E-value=1.7e-17 Score=113.85 Aligned_cols=95 Identities=17% Similarity=0.252 Sum_probs=84.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCc
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLN 93 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id 93 (122)
++++|||++|+||.+++++|+++|++|++++|+.+..++...++...+.++.++.+|+++++++.++++.+.+++ +++|
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~-~~id 79 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKW-GGID 79 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 478999999999999999999999999999999888888888877666778899999999999999999999988 8999
Q ss_pred EEEEcCCCCCcchhhc
Q 033299 94 ILVSSSAKVPFELLIS 109 (122)
Q Consensus 94 ~lv~~ag~~~~~~~~~ 109 (122)
+||||||........+
T Consensus 80 ~lI~~ag~~~~~~~~~ 95 (270)
T PRK05650 80 VIVNNAGVASGGFFEE 95 (270)
T ss_pred EEEECCCCCCCCCccc
Confidence 9999999876554433
No 97
>PRK05855 short chain dehydrogenase; Validated
Probab=99.77 E-value=1.4e-17 Score=124.19 Aligned_cols=99 Identities=19% Similarity=0.198 Sum_probs=88.2
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
..+.+++++||||+||||.+++++|+++|++|++++|+.+..++..+++...+.++.++.||++|++++.++++++.+.+
T Consensus 311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH 390 (582)
T ss_pred ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 34567899999999999999999999999999999999988888888777666788999999999999999999999998
Q ss_pred CCCCcEEEEcCCCCCcchhh
Q 033299 89 DGKLNILVSSSAKVPFELLI 108 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~~~~ 108 (122)
|++|+||||||+.......
T Consensus 391 -g~id~lv~~Ag~~~~~~~~ 409 (582)
T PRK05855 391 -GVPDIVVNNAGIGMAGGFL 409 (582)
T ss_pred -CCCcEEEECCccCCCCCcc
Confidence 8999999999997655443
No 98
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=99.77 E-value=4.5e-18 Score=110.38 Aligned_cols=103 Identities=25% Similarity=0.304 Sum_probs=90.1
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
.+++.|.+++||+++|||++++..|+++|++|++++++....++....+... .+...+.|||++..+++..+++..+++
T Consensus 10 ~r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~-~~h~aF~~DVS~a~~v~~~l~e~~k~~ 88 (256)
T KOG1200|consen 10 QRLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY-GDHSAFSCDVSKAHDVQNTLEEMEKSL 88 (256)
T ss_pred HHHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC-CccceeeeccCcHHHHHHHHHHHHHhc
Confidence 3567889999999999999999999999999999999988888877777654 356788999999999999999999999
Q ss_pred CCCCcEEEEcCCCCCcchhhccccc
Q 033299 89 DGKLNILVSSSAKVPFELLISEKLK 113 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~~~~~~~~~ 113 (122)
|++++||||||+..+........+
T Consensus 89 -g~psvlVncAGItrD~~Llrmkq~ 112 (256)
T KOG1200|consen 89 -GTPSVLVNCAGITRDGLLLRMKQE 112 (256)
T ss_pred -CCCcEEEEcCccccccceeeccHH
Confidence 899999999999988766555443
No 99
>PRK06196 oxidoreductase; Provisional
Probab=99.76 E-value=1.1e-17 Score=117.28 Aligned_cols=90 Identities=24% Similarity=0.293 Sum_probs=79.8
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
..+++|+++|||+++|||.++++.|+++|++|++++|+.+..++...++. ++.++.+|++|.++++++++++.+++
T Consensus 22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~~~ 97 (315)
T PRK06196 22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID----GVEVVMLDLADLESVRAFAERFLDSG 97 (315)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHhcC
Confidence 35678999999999999999999999999999999999887776665553 37788999999999999999999888
Q ss_pred CCCCcEEEEcCCCCC
Q 033299 89 DGKLNILVSSSAKVP 103 (122)
Q Consensus 89 ~g~id~lv~~ag~~~ 103 (122)
+++|+||||||+..
T Consensus 98 -~~iD~li~nAg~~~ 111 (315)
T PRK06196 98 -RRIDILINNAGVMA 111 (315)
T ss_pred -CCCCEEEECCCCCC
Confidence 89999999999864
No 100
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.76 E-value=3e-17 Score=113.02 Aligned_cols=97 Identities=23% Similarity=0.273 Sum_probs=84.1
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
+...+|+++|||++|+||.+++++|+++|++|+++.|+.+...+....+...+.++.++.+|+++++++.++++++.+.+
T Consensus 6 ~~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (274)
T PRK07775 6 PHPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEAL 85 (274)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 35667899999999999999999999999999999998877766666666556678899999999999999999998888
Q ss_pred CCCCcEEEEcCCCCCcch
Q 033299 89 DGKLNILVSSSAKVPFEL 106 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~~ 106 (122)
+++|++|||||......
T Consensus 86 -~~id~vi~~Ag~~~~~~ 102 (274)
T PRK07775 86 -GEIEVLVSGAGDTYFGK 102 (274)
T ss_pred -CCCCEEEECCCcCCCcc
Confidence 89999999999875443
No 101
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.76 E-value=2.3e-17 Score=111.58 Aligned_cols=94 Identities=22% Similarity=0.295 Sum_probs=79.5
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHCCCeEEEe-ecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTC-SRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
+++|+++|||++++||.+++++|+++|++|++. .++.....+..+++...+.++..+.+|++|.+++.++++++.+.+
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 79 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEV- 79 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh-
Confidence 457999999999999999999999999998774 455555555666665556678889999999999999999999998
Q ss_pred CCCcEEEEcCCCCCcc
Q 033299 90 GKLNILVSSSAKVPFE 105 (122)
Q Consensus 90 g~id~lv~~ag~~~~~ 105 (122)
+++|+||||||.....
T Consensus 80 ~~id~li~~ag~~~~~ 95 (246)
T PRK12938 80 GEIDVLVNNAGITRDV 95 (246)
T ss_pred CCCCEEEECCCCCCCC
Confidence 8999999999987543
No 102
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.76 E-value=2.9e-17 Score=111.00 Aligned_cols=95 Identities=32% Similarity=0.428 Sum_probs=84.8
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCC
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDG 90 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g 90 (122)
+++|+++|||++|+||.++++.|+++|++|++++|+.++.....+.+...+.++.++.+|++|.+++.++++++.+.+ +
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~ 82 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDF-G 82 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh-C
Confidence 567899999999999999999999999999999999887777777776666678899999999999999999999998 8
Q ss_pred CCcEEEEcCCCCCcch
Q 033299 91 KLNILVSSSAKVPFEL 106 (122)
Q Consensus 91 ~id~lv~~ag~~~~~~ 106 (122)
++|++||++|.....+
T Consensus 83 ~~d~vi~~ag~~~~~~ 98 (251)
T PRK12826 83 RLDILVANAGIFPLTP 98 (251)
T ss_pred CCCEEEECCCCCCCCC
Confidence 9999999999876543
No 103
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.76 E-value=2.9e-17 Score=111.10 Aligned_cols=96 Identities=29% Similarity=0.431 Sum_probs=82.0
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEee-cChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCS-RNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
.+++|+++|||++++||.+++++|+++|++|++.. |+.+..++..+++...+.++.++.+|+++++++.++++++.+.+
T Consensus 3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (247)
T PRK12935 3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHF 82 (247)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 35689999999999999999999999999988754 45566666666666556679999999999999999999999999
Q ss_pred CCCCcEEEEcCCCCCcch
Q 033299 89 DGKLNILVSSSAKVPFEL 106 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~~ 106 (122)
+++|+||||||......
T Consensus 83 -~~id~vi~~ag~~~~~~ 99 (247)
T PRK12935 83 -GKVDILVNNAGITRDRT 99 (247)
T ss_pred -CCCCEEEECCCCCCCCC
Confidence 89999999999976543
No 104
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.76 E-value=3.4e-17 Score=110.50 Aligned_cols=95 Identities=27% Similarity=0.444 Sum_probs=81.2
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecC-hhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRN-ETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
.+++|+++|||++++||.++++.|+++|++|+++.++ .+...+..+++...+.++.++.+|+++.+++.++++++.+.+
T Consensus 2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (245)
T PRK12937 2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF 81 (245)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4678999999999999999999999999998877765 344555666666556678999999999999999999999998
Q ss_pred CCCCcEEEEcCCCCCcc
Q 033299 89 DGKLNILVSSSAKVPFE 105 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~ 105 (122)
+++|++|||||.....
T Consensus 82 -~~id~vi~~ag~~~~~ 97 (245)
T PRK12937 82 -GRIDVLVNNAGVMPLG 97 (245)
T ss_pred -CCCCEEEECCCCCCCC
Confidence 8999999999987543
No 105
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.76 E-value=2.7e-17 Score=111.97 Aligned_cols=97 Identities=27% Similarity=0.321 Sum_probs=79.8
Q ss_pred ccCCCEEEEecCCC--chHHHHHHHHHHCCCeEEEeecC-----------hhHHHHHHHHHHhcCCeEEEEeecCCCHHH
Q 033299 10 SLKGMTALVTGGTR--GIGHAIVEELTAFGAIVHTCSRN-----------ETELNERIQEWKSKGLKVSGSACDLKIRAE 76 (122)
Q Consensus 10 ~~~~~~~litG~~~--~ig~~~~~~l~~~g~~v~~~~r~-----------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 76 (122)
.+++|+++|||+++ |||.+++++|+++|++|++++|+ .........++...+.++.++.+|++++++
T Consensus 2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 81 (256)
T PRK12748 2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA 81 (256)
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 56789999999994 89999999999999999999887 222222444444445678999999999999
Q ss_pred HHHHHHHHHHHcCCCCcEEEEcCCCCCcchh
Q 033299 77 RQKLMETVCSEFDGKLNILVSSSAKVPFELL 107 (122)
Q Consensus 77 ~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~ 107 (122)
+.++++++.+.+ +++|+||||||+....+.
T Consensus 82 ~~~~~~~~~~~~-g~id~vi~~ag~~~~~~~ 111 (256)
T PRK12748 82 PNRVFYAVSERL-GDPSILINNAAYSTHTRL 111 (256)
T ss_pred HHHHHHHHHHhC-CCCCEEEECCCcCCCCCh
Confidence 999999999998 899999999998755443
No 106
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.76 E-value=3.3e-17 Score=113.81 Aligned_cols=95 Identities=32% Similarity=0.369 Sum_probs=81.5
Q ss_pred ccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChh-HHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHH
Q 033299 8 RWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNET-ELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCS 86 (122)
Q Consensus 8 ~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 86 (122)
+..+++|++||||++++||.+++++|+++|++|++++|+.. ........+...+.++.++.+|+++.+++.++++++.+
T Consensus 41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~ 120 (290)
T PRK06701 41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVR 120 (290)
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 45778899999999999999999999999999999998753 34445555554456788999999999999999999999
Q ss_pred HcCCCCcEEEEcCCCCC
Q 033299 87 EFDGKLNILVSSSAKVP 103 (122)
Q Consensus 87 ~~~g~id~lv~~ag~~~ 103 (122)
.+ +++|+||||||...
T Consensus 121 ~~-~~iD~lI~~Ag~~~ 136 (290)
T PRK06701 121 EL-GRLDILVNNAAFQY 136 (290)
T ss_pred Hc-CCCCEEEECCcccC
Confidence 98 89999999999864
No 107
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.76 E-value=2.9e-17 Score=111.89 Aligned_cols=96 Identities=21% Similarity=0.256 Sum_probs=82.8
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhc-C-CeEEEEeecCCCHHHHHHHHHHHHHHcCC
Q 033299 13 GMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSK-G-LKVSGSACDLKIRAERQKLMETVCSEFDG 90 (122)
Q Consensus 13 ~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g 90 (122)
+|++||||++++||.++++.|+++|++|++++|+.+..++...++... + .++.++.+|+++++.+.++++++.+.+ +
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~ 80 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIF-G 80 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence 689999999999999999999999999999999987777766666543 2 468899999999999999999999998 8
Q ss_pred CCcEEEEcCCCCCcchhhc
Q 033299 91 KLNILVSSSAKVPFELLIS 109 (122)
Q Consensus 91 ~id~lv~~ag~~~~~~~~~ 109 (122)
++|++|||||........+
T Consensus 81 ~id~vv~~ag~~~~~~~~~ 99 (259)
T PRK12384 81 RVDLLVYNAGIAKAAFITD 99 (259)
T ss_pred CCCEEEECCCcCCCCCccc
Confidence 9999999999876554433
No 108
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.76 E-value=3.2e-17 Score=110.91 Aligned_cols=95 Identities=27% Similarity=0.380 Sum_probs=84.2
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCC
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDG 90 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g 90 (122)
++++.++|||++++||.+++++|+++|++|++++|+.+...+..+++...+.++.++.+|+++.++++++++.+.+.+ +
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~ 79 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQAL-G 79 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence 468899999999999999999999999999999999888777777776656678999999999999999999999988 8
Q ss_pred CCcEEEEcCCCCCcch
Q 033299 91 KLNILVSSSAKVPFEL 106 (122)
Q Consensus 91 ~id~lv~~ag~~~~~~ 106 (122)
++|++||++|......
T Consensus 80 ~~d~vi~~ag~~~~~~ 95 (250)
T TIGR03206 80 PVDVLVNNAGWDKFGP 95 (250)
T ss_pred CCCEEEECCCCCCCCC
Confidence 9999999999865433
No 109
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.76 E-value=3e-17 Score=111.37 Aligned_cols=92 Identities=27% Similarity=0.415 Sum_probs=82.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCc
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLN 93 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id 93 (122)
|+++|||++|+||.+++++|+++|++|++++|+.+..++..+++...+.++.++.+|++|++++.+++.++.+.+ +++|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-~~id 79 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKF-GGFD 79 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 579999999999999999999999999999999887777777777666678999999999999999999999998 8999
Q ss_pred EEEEcCCCCCcch
Q 033299 94 ILVSSSAKVPFEL 106 (122)
Q Consensus 94 ~lv~~ag~~~~~~ 106 (122)
+||||+|.....+
T Consensus 80 ~vi~~ag~~~~~~ 92 (254)
T TIGR02415 80 VMVNNAGVAPITP 92 (254)
T ss_pred EEEECCCcCCCCC
Confidence 9999999875543
No 110
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.76 E-value=3.6e-17 Score=111.57 Aligned_cols=98 Identities=31% Similarity=0.350 Sum_probs=79.7
Q ss_pred cccCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEeecC-----------hhHHHHHHHHHHhcCCeEEEEeecCCCHH
Q 033299 9 WSLKGMTALVTGGT--RGIGHAIVEELTAFGAIVHTCSRN-----------ETELNERIQEWKSKGLKVSGSACDLKIRA 75 (122)
Q Consensus 9 ~~~~~~~~litG~~--~~ig~~~~~~l~~~g~~v~~~~r~-----------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 75 (122)
..+++|+++|||++ +|||.+++++|+++|++|++++|. .+...+..+++...+.++.++.+|+++.+
T Consensus 2 ~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~ 81 (256)
T PRK12859 2 NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQND 81 (256)
T ss_pred CCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence 35789999999998 499999999999999999887532 22233444555555667889999999999
Q ss_pred HHHHHHHHHHHHcCCCCcEEEEcCCCCCcchh
Q 033299 76 ERQKLMETVCSEFDGKLNILVSSSAKVPFELL 107 (122)
Q Consensus 76 ~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~ 107 (122)
++.++++++.+.+ |++|++|||||.....+.
T Consensus 82 ~i~~~~~~~~~~~-g~id~li~~ag~~~~~~~ 112 (256)
T PRK12859 82 APKELLNKVTEQL-GYPHILVNNAAYSTNNDF 112 (256)
T ss_pred HHHHHHHHHHHHc-CCCcEEEECCCCCCCCCh
Confidence 9999999999998 899999999998755433
No 111
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.76 E-value=4.7e-17 Score=110.11 Aligned_cols=94 Identities=27% Similarity=0.439 Sum_probs=84.4
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
++++++++|||++++||.++++.|+++|++|++++|+.++..+..+++...+.++.++.+|+++++++.++++.+.+.+
T Consensus 2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 80 (253)
T PRK08217 2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDF- 80 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence 4678999999999999999999999999999999999888777777776666678899999999999999999998888
Q ss_pred CCCcEEEEcCCCCCc
Q 033299 90 GKLNILVSSSAKVPF 104 (122)
Q Consensus 90 g~id~lv~~ag~~~~ 104 (122)
+++|++|||+|....
T Consensus 81 ~~id~vi~~ag~~~~ 95 (253)
T PRK08217 81 GQLNGLINNAGILRD 95 (253)
T ss_pred CCCCEEEECCCccCc
Confidence 799999999997653
No 112
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.76 E-value=2.3e-17 Score=112.91 Aligned_cols=93 Identities=23% Similarity=0.223 Sum_probs=72.9
Q ss_pred ccCCCEEEEecC--CCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 10 SLKGMTALVTGG--TRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 10 ~~~~~~~litG~--~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
++++|+++|||+ ++|||.+++++|+++|++|++++|.... .+..+++........++.+|++|+++++++++++.++
T Consensus 3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 81 (260)
T PRK06997 3 FLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQH 81 (260)
T ss_pred ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHH-HHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHH
Confidence 367899999996 6899999999999999999988654221 1222333222123357899999999999999999999
Q ss_pred cCCCCcEEEEcCCCCCc
Q 033299 88 FDGKLNILVSSSAKVPF 104 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~~ 104 (122)
+ |++|++|||||+...
T Consensus 82 ~-g~iD~lvnnAG~~~~ 97 (260)
T PRK06997 82 W-DGLDGLVHSIGFAPR 97 (260)
T ss_pred h-CCCcEEEEccccCCc
Confidence 9 899999999998643
No 113
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.76 E-value=3.4e-17 Score=111.55 Aligned_cols=97 Identities=29% Similarity=0.428 Sum_probs=78.8
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecC----hhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRN----ETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETV 84 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~ 84 (122)
+.+++|+++|||++++||.++++.|+++|++|+++.++ .+..++..+++...+.++.++.+|+++++++.++++++
T Consensus 4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~ 83 (257)
T PRK12744 4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDA 83 (257)
T ss_pred CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHH
Confidence 34678999999999999999999999999996666543 33444555555544557889999999999999999999
Q ss_pred HHHcCCCCcEEEEcCCCCCcch
Q 033299 85 CSEFDGKLNILVSSSAKVPFEL 106 (122)
Q Consensus 85 ~~~~~g~id~lv~~ag~~~~~~ 106 (122)
.+.+ +++|++|||||.....+
T Consensus 84 ~~~~-~~id~li~~ag~~~~~~ 104 (257)
T PRK12744 84 KAAF-GRPDIAINTVGKVLKKP 104 (257)
T ss_pred HHhh-CCCCEEEECCcccCCCC
Confidence 9998 89999999999865433
No 114
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.76 E-value=4.1e-17 Score=110.02 Aligned_cols=93 Identities=30% Similarity=0.359 Sum_probs=80.5
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
+++++++++|||++|+||.++++.|+++|+.|++..|+.++.++....+ +.++.++.+|+++.++++++++++.+++
T Consensus 2 ~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (245)
T PRK12936 2 FDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL---GERVKIFPANLSDRDEVKALGQKAEADL 78 (245)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4567899999999999999999999999999999888877766655443 3467889999999999999999999998
Q ss_pred CCCCcEEEEcCCCCCcc
Q 033299 89 DGKLNILVSSSAKVPFE 105 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~ 105 (122)
+++|++|||||.....
T Consensus 79 -~~id~vi~~ag~~~~~ 94 (245)
T PRK12936 79 -EGVDILVNNAGITKDG 94 (245)
T ss_pred -CCCCEEEECCCCCCCC
Confidence 8999999999987543
No 115
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.75 E-value=4.8e-17 Score=111.13 Aligned_cols=97 Identities=27% Similarity=0.378 Sum_probs=83.3
Q ss_pred ccCCCEEEEecCCC-chHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHh-cC-CeEEEEeecCCCHHHHHHHHHHHHH
Q 033299 10 SLKGMTALVTGGTR-GIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKS-KG-LKVSGSACDLKIRAERQKLMETVCS 86 (122)
Q Consensus 10 ~~~~~~~litG~~~-~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~-~~~~~~~~Dv~~~~~~~~~~~~~~~ 86 (122)
.+++|+++|||++| |||.++++.|+++|++|++++|+.++.++..+++.. .+ .++.++.+|++++++++++++++.+
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 45689999999985 899999999999999999999998877777776655 23 3688899999999999999999999
Q ss_pred HcCCCCcEEEEcCCCCCcchh
Q 033299 87 EFDGKLNILVSSSAKVPFELL 107 (122)
Q Consensus 87 ~~~g~id~lv~~ag~~~~~~~ 107 (122)
.+ +++|+||||||.......
T Consensus 94 ~~-g~id~li~~ag~~~~~~~ 113 (262)
T PRK07831 94 RL-GRLDVLVNNAGLGGQTPV 113 (262)
T ss_pred Hc-CCCCEEEECCCCCCCCCc
Confidence 98 899999999998654433
No 116
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.75 E-value=5.4e-17 Score=109.10 Aligned_cols=96 Identities=38% Similarity=0.562 Sum_probs=83.6
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
+.+++++++|||++|+||.+++++|+++|++|++++|+.+...+..+++... .++.++.+|+++++++.++++++.+.+
T Consensus 2 ~~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (237)
T PRK07326 2 MSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAAF 80 (237)
T ss_pred CCCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3466899999999999999999999999999999999988777776666543 468889999999999999999998888
Q ss_pred CCCCcEEEEcCCCCCcch
Q 033299 89 DGKLNILVSSSAKVPFEL 106 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~~ 106 (122)
+++|++||++|......
T Consensus 81 -~~~d~vi~~ag~~~~~~ 97 (237)
T PRK07326 81 -GGLDVLIANAGVGHFAP 97 (237)
T ss_pred -CCCCEEEECCCCCCCCc
Confidence 79999999999875543
No 117
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.75 E-value=4.6e-17 Score=110.90 Aligned_cols=96 Identities=29% Similarity=0.434 Sum_probs=83.9
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAI-VHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
.+++|+++|||++++||..++++|.++|++ |++++|+.+.......++...+.++.++.+|+++++++.++++.+.+.+
T Consensus 3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (260)
T PRK06198 3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF 82 (260)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 467899999999999999999999999998 9999998777766666665556678889999999999999999999988
Q ss_pred CCCCcEEEEcCCCCCcch
Q 033299 89 DGKLNILVSSSAKVPFEL 106 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~~ 106 (122)
+++|++||++|......
T Consensus 83 -g~id~li~~ag~~~~~~ 99 (260)
T PRK06198 83 -GRLDALVNAAGLTDRGT 99 (260)
T ss_pred -CCCCEEEECCCcCCCCC
Confidence 78999999999875443
No 118
>PRK09186 flagellin modification protein A; Provisional
Probab=99.75 E-value=3.9e-17 Score=110.95 Aligned_cols=91 Identities=25% Similarity=0.353 Sum_probs=79.7
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhc-C-CeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSK-G-LKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
+++|+++|||++++||.++++.|+++|++|++++|+.+..++...++... + ..+.++.||++|++++.++++++.+.+
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999999999999988887777777432 2 346677999999999999999999998
Q ss_pred CCCCcEEEEcCCCC
Q 033299 89 DGKLNILVSSSAKV 102 (122)
Q Consensus 89 ~g~id~lv~~ag~~ 102 (122)
+++|++|||||..
T Consensus 82 -~~id~vi~~A~~~ 94 (256)
T PRK09186 82 -GKIDGAVNCAYPR 94 (256)
T ss_pred -CCccEEEECCccc
Confidence 8999999999864
No 119
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.75 E-value=5.4e-17 Score=109.24 Aligned_cols=95 Identities=36% Similarity=0.431 Sum_probs=84.4
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
.+++++++|||++|+||.++++.|.++|+.|++++|+.+........+...+.++.++.+|+++++++.++++++.+.+
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 80 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAF- 80 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHh-
Confidence 4557899999999999999999999999999999999887777777776666788899999999999999999998888
Q ss_pred CCCcEEEEcCCCCCcc
Q 033299 90 GKLNILVSSSAKVPFE 105 (122)
Q Consensus 90 g~id~lv~~ag~~~~~ 105 (122)
+++|++||++|.....
T Consensus 81 ~~id~vi~~ag~~~~~ 96 (246)
T PRK05653 81 GALDILVNNAGITRDA 96 (246)
T ss_pred CCCCEEEECCCcCCCC
Confidence 8899999999987654
No 120
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.75 E-value=5.5e-17 Score=110.16 Aligned_cols=98 Identities=35% Similarity=0.446 Sum_probs=81.4
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEe-ecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTC-SRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
++++++++|||++|+||.+++++|+++|+.|+++ .|+.+..++....+...+.++.++.+|++|++++.++++++.+++
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~ 82 (254)
T PRK12746 3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNEL 82 (254)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHh
Confidence 4668999999999999999999999999998774 687777777666665555578899999999999999999988775
Q ss_pred C-----CCCcEEEEcCCCCCcchh
Q 033299 89 D-----GKLNILVSSSAKVPFELL 107 (122)
Q Consensus 89 ~-----g~id~lv~~ag~~~~~~~ 107 (122)
+ +++|++||+||.......
T Consensus 83 ~~~~~~~~id~vi~~ag~~~~~~~ 106 (254)
T PRK12746 83 QIRVGTSEIDILVNNAGIGTQGTI 106 (254)
T ss_pred ccccCCCCccEEEECCCCCCCCCh
Confidence 1 369999999998765443
No 121
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.75 E-value=6.6e-17 Score=109.03 Aligned_cols=95 Identities=34% Similarity=0.488 Sum_probs=83.8
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEe-ecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTC-SRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
.+++|+++|||++++||.++++.|+++|++|+++ .|+.+......+.+...+.++.++.+|+++++++.++++.+.+.+
T Consensus 2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T PRK05565 2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF 81 (247)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 4678899999999999999999999999999988 898877777777766555678899999999999999999999888
Q ss_pred CCCCcEEEEcCCCCCcc
Q 033299 89 DGKLNILVSSSAKVPFE 105 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~ 105 (122)
+++|++||++|.....
T Consensus 82 -~~id~vi~~ag~~~~~ 97 (247)
T PRK05565 82 -GKIDILVNNAGISNFG 97 (247)
T ss_pred -CCCCEEEECCCcCCCC
Confidence 8899999999987543
No 122
>PRK07985 oxidoreductase; Provisional
Probab=99.75 E-value=4.6e-17 Score=113.29 Aligned_cols=92 Identities=26% Similarity=0.243 Sum_probs=78.2
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecCh--hHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNE--TELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
.+++|+++|||+++|||.++++.|+++|++|++.+|+. +..+++.+.+...+.++.++.+|+++++++.++++++.+.
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 125 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA 125 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 47789999999999999999999999999999887653 3444454444445567888999999999999999999999
Q ss_pred cCCCCcEEEEcCCCC
Q 033299 88 FDGKLNILVSSSAKV 102 (122)
Q Consensus 88 ~~g~id~lv~~ag~~ 102 (122)
+ +++|++|||||..
T Consensus 126 ~-g~id~lv~~Ag~~ 139 (294)
T PRK07985 126 L-GGLDIMALVAGKQ 139 (294)
T ss_pred h-CCCCEEEECCCCC
Confidence 8 8999999999975
No 123
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.74 E-value=9.8e-17 Score=108.67 Aligned_cols=99 Identities=29% Similarity=0.426 Sum_probs=81.4
Q ss_pred ccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeec-ChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHH
Q 033299 8 RWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSR-NETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCS 86 (122)
Q Consensus 8 ~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 86 (122)
|+++++++++|||++++||.+++++|+++|++|++..| +.+........+...+.++.++.+|+++++++.++++++.+
T Consensus 1 ~~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (252)
T PRK06077 1 MYSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATID 80 (252)
T ss_pred CCCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHH
Confidence 35567899999999999999999999999999877665 34444455555555556788899999999999999999999
Q ss_pred HcCCCCcEEEEcCCCCCcchh
Q 033299 87 EFDGKLNILVSSSAKVPFELL 107 (122)
Q Consensus 87 ~~~g~id~lv~~ag~~~~~~~ 107 (122)
.+ +++|++|||||.....+.
T Consensus 81 ~~-~~~d~vi~~ag~~~~~~~ 100 (252)
T PRK06077 81 RY-GVADILVNNAGLGLFSPF 100 (252)
T ss_pred Hc-CCCCEEEECCCCCCCCCh
Confidence 98 899999999998655443
No 124
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.74 E-value=5.7e-17 Score=111.62 Aligned_cols=93 Identities=19% Similarity=0.263 Sum_probs=80.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhc--CCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSK--GLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
++|+++|||++|+||.++++.|+++|++|++++|+.+..++..+++... +.++.++.+|++|+++++. ++++.+.+
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~- 79 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI- 79 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc-
Confidence 5789999999999999999999999999999999988777766655543 2468899999999999999 99988888
Q ss_pred CCCcEEEEcCCCCCcch
Q 033299 90 GKLNILVSSSAKVPFEL 106 (122)
Q Consensus 90 g~id~lv~~ag~~~~~~ 106 (122)
+++|++|||||......
T Consensus 80 ~~id~vv~~ag~~~~~~ 96 (280)
T PRK06914 80 GRIDLLVNNAGYANGGF 96 (280)
T ss_pred CCeeEEEECCcccccCc
Confidence 89999999999876543
No 125
>PRK06940 short chain dehydrogenase; Provisional
Probab=99.74 E-value=6.6e-17 Score=111.49 Aligned_cols=88 Identities=26% Similarity=0.374 Sum_probs=76.8
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
++|+++|||+ +|||.+++++|. +|++|++++|+.+..++..+++...+.++.++.+|++|++++.++++++ +++ ++
T Consensus 1 ~~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~-g~ 76 (275)
T PRK06940 1 MKEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTL-GP 76 (275)
T ss_pred CCCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-Hhc-CC
Confidence 3689999998 699999999996 7999999999988777777777655667889999999999999999987 567 89
Q ss_pred CcEEEEcCCCCC
Q 033299 92 LNILVSSSAKVP 103 (122)
Q Consensus 92 id~lv~~ag~~~ 103 (122)
+|+||||||+..
T Consensus 77 id~li~nAG~~~ 88 (275)
T PRK06940 77 VTGLVHTAGVSP 88 (275)
T ss_pred CCEEEECCCcCC
Confidence 999999999864
No 126
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.74 E-value=8.9e-17 Score=108.79 Aligned_cols=93 Identities=34% Similarity=0.431 Sum_probs=79.1
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChh-HHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNET-ELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
++.+|+++|||++||||.++++.|+++|++|+++.|+.+ ..+....++...+.++.++.+|+++++++.++++++.+++
T Consensus 3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (248)
T PRK07806 3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEF 82 (248)
T ss_pred CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 366899999999999999999999999999999888753 4455555565555568889999999999999999998888
Q ss_pred CCCCcEEEEcCCCCC
Q 033299 89 DGKLNILVSSSAKVP 103 (122)
Q Consensus 89 ~g~id~lv~~ag~~~ 103 (122)
+++|++|||||...
T Consensus 83 -~~~d~vi~~ag~~~ 96 (248)
T PRK07806 83 -GGLDALVLNASGGM 96 (248)
T ss_pred -CCCcEEEECCCCCC
Confidence 78999999998753
No 127
>PRK06182 short chain dehydrogenase; Validated
Probab=99.74 E-value=4.3e-17 Score=111.99 Aligned_cols=89 Identities=27% Similarity=0.391 Sum_probs=76.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
++|+++|||++||||.++++.|+++|++|++++|+.+++.+.. . .++.++.+|++|++++.++++++.+.+ ++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~----~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~-~~ 74 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA----S--LGVHPLSLDVTDEASIKAAVDTIIAEE-GR 74 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----h--CCCeEEEeeCCCHHHHHHHHHHHHHhc-CC
Confidence 4789999999999999999999999999999999987654432 2 247788999999999999999999998 89
Q ss_pred CcEEEEcCCCCCcchh
Q 033299 92 LNILVSSSAKVPFELL 107 (122)
Q Consensus 92 id~lv~~ag~~~~~~~ 107 (122)
+|+||||||+....+.
T Consensus 75 id~li~~ag~~~~~~~ 90 (273)
T PRK06182 75 IDVLVNNAGYGSYGAI 90 (273)
T ss_pred CCEEEECCCcCCCCch
Confidence 9999999999765543
No 128
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.74 E-value=1.1e-16 Score=108.70 Aligned_cols=95 Identities=35% Similarity=0.497 Sum_probs=79.6
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
+++++|+++|||++++||.++++.|+++|++|++++|+.+. .+...++. +.++.++.+|++++++++++++++.+.+
T Consensus 11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (255)
T PRK06841 11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVISAF 87 (255)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 56789999999999999999999999999999999998653 22333332 2356789999999999999999999998
Q ss_pred CCCCcEEEEcCCCCCcchh
Q 033299 89 DGKLNILVSSSAKVPFELL 107 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~~~ 107 (122)
+++|++|||+|.....+.
T Consensus 88 -~~~d~vi~~ag~~~~~~~ 105 (255)
T PRK06841 88 -GRIDILVNSAGVALLAPA 105 (255)
T ss_pred -CCCCEEEECCCCCCCCCh
Confidence 899999999998765443
No 129
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.74 E-value=9.5e-17 Score=109.02 Aligned_cols=96 Identities=31% Similarity=0.407 Sum_probs=78.1
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHCCCeEEEee-cChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHH--
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCS-RNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSE-- 87 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-- 87 (122)
+++|+++|||+++|||.++++.|++.|++|+++. ++.+...+...++...+.+...+.+|+++.+++..+++++.+.
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 3579999999999999999999999999998864 5666666666677665667888999999999999988887653
Q ss_pred --cC-CCCcEEEEcCCCCCcch
Q 033299 88 --FD-GKLNILVSSSAKVPFEL 106 (122)
Q Consensus 88 --~~-g~id~lv~~ag~~~~~~ 106 (122)
++ +++|+||||||+.....
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~ 103 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAF 103 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCC
Confidence 31 37999999999865443
No 130
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.74 E-value=6.3e-17 Score=110.13 Aligned_cols=91 Identities=35% Similarity=0.489 Sum_probs=75.0
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
.+++|+++|||+++|||.++++.|+++|++|+++.++.+.. .+++... ++.++.+|++|++++.++++++.+++
T Consensus 4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~- 77 (255)
T PRK06463 4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELREK--GVFTIKCDVGNRDQVKKSKEVVEKEF- 77 (255)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHhC--CCeEEEecCCCHHHHHHHHHHHHHHc-
Confidence 46789999999999999999999999999998876654322 2223222 47789999999999999999999999
Q ss_pred CCCcEEEEcCCCCCcch
Q 033299 90 GKLNILVSSSAKVPFEL 106 (122)
Q Consensus 90 g~id~lv~~ag~~~~~~ 106 (122)
+++|+||||||+....+
T Consensus 78 ~~id~li~~ag~~~~~~ 94 (255)
T PRK06463 78 GRVDVLVNNAGIMYLMP 94 (255)
T ss_pred CCCCEEEECCCcCCCCC
Confidence 89999999999875443
No 131
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.74 E-value=1.2e-16 Score=107.89 Aligned_cols=96 Identities=30% Similarity=0.377 Sum_probs=80.3
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeec----ChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHH
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSR----NETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVC 85 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~ 85 (122)
.+++++++|||++|+||.++++.|+++|++|+++.| +.+...+...++...+.++.++.+|++++++++++++++.
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 82 (249)
T PRK12827 3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGV 82 (249)
T ss_pred CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 466789999999999999999999999999988654 4444555555555556678899999999999999999999
Q ss_pred HHcCCCCcEEEEcCCCCCcch
Q 033299 86 SEFDGKLNILVSSSAKVPFEL 106 (122)
Q Consensus 86 ~~~~g~id~lv~~ag~~~~~~ 106 (122)
+.+ +++|++|||+|......
T Consensus 83 ~~~-~~~d~vi~~ag~~~~~~ 102 (249)
T PRK12827 83 EEF-GRLDILVNNAGIATDAA 102 (249)
T ss_pred HHh-CCCCEEEECCCCCCCCC
Confidence 888 78999999999876443
No 132
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.74 E-value=1.2e-16 Score=109.86 Aligned_cols=93 Identities=26% Similarity=0.329 Sum_probs=81.8
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhc--CCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSK--GLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
.+++|+++|||++|+||.++++.|+++|++|++++|+.+......+++... +.++.++.+|+++++++.++++++.++
T Consensus 4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (276)
T PRK05875 4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW 83 (276)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 367899999999999999999999999999999999987777766666543 246888999999999999999999999
Q ss_pred cCCCCcEEEEcCCCCC
Q 033299 88 FDGKLNILVSSSAKVP 103 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~ 103 (122)
+ +++|++|||||...
T Consensus 84 ~-~~~d~li~~ag~~~ 98 (276)
T PRK05875 84 H-GRLHGVVHCAGGSE 98 (276)
T ss_pred c-CCCCEEEECCCccc
Confidence 8 89999999999753
No 133
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.74 E-value=1.4e-16 Score=107.83 Aligned_cols=91 Identities=26% Similarity=0.336 Sum_probs=77.7
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEee-cChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 13 GMTALVTGGTRGIGHAIVEELTAFGAIVHTCS-RNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 13 ~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
+++++|||++++||.+++++|+++|+.|+++. ++.+..++....+...+.++.++.+|++|.+++.++++++.+.+ ++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~ 80 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDREL-GR 80 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHh-CC
Confidence 57899999999999999999999999988776 44555555656665555568889999999999999999999998 89
Q ss_pred CcEEEEcCCCCCc
Q 033299 92 LNILVSSSAKVPF 104 (122)
Q Consensus 92 id~lv~~ag~~~~ 104 (122)
+|+||||||....
T Consensus 81 id~li~~ag~~~~ 93 (248)
T PRK06123 81 LDALVNNAGILEA 93 (248)
T ss_pred CCEEEECCCCCCC
Confidence 9999999998754
No 134
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.73 E-value=9.8e-17 Score=121.71 Aligned_cols=94 Identities=29% Similarity=0.452 Sum_probs=85.6
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
.+++|+++|||+++|||.+++++|+++|++|++++|+.+..++..+++...+.++.++.+|++|.+++.++++++.+++
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~- 446 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH- 446 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc-
Confidence 5678999999999999999999999999999999999988888877776666678999999999999999999999999
Q ss_pred CCCcEEEEcCCCCCc
Q 033299 90 GKLNILVSSSAKVPF 104 (122)
Q Consensus 90 g~id~lv~~ag~~~~ 104 (122)
+++|++|||||....
T Consensus 447 g~id~li~~Ag~~~~ 461 (657)
T PRK07201 447 GHVDYLVNNAGRSIR 461 (657)
T ss_pred CCCCEEEECCCCCCC
Confidence 899999999998643
No 135
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.73 E-value=1.4e-16 Score=108.74 Aligned_cols=94 Identities=28% Similarity=0.428 Sum_probs=83.4
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCC
Q 033299 13 GMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKL 92 (122)
Q Consensus 13 ~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~i 92 (122)
+++++|||++|+||.++++.|+++|++|++++|+....++..+++...+.++.++.+|++|++++.++++++.+++ +++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i 79 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARF-GGI 79 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCC
Confidence 4689999999999999999999999999999999887777777776666678899999999999999999999988 889
Q ss_pred cEEEEcCCCCCcchh
Q 033299 93 NILVSSSAKVPFELL 107 (122)
Q Consensus 93 d~lv~~ag~~~~~~~ 107 (122)
|++|||+|.......
T Consensus 80 d~vi~~ag~~~~~~~ 94 (263)
T PRK06181 80 DILVNNAGITMWSRF 94 (263)
T ss_pred CEEEECCCcccccch
Confidence 999999998765544
No 136
>PRK06125 short chain dehydrogenase; Provisional
Probab=99.73 E-value=1.1e-16 Score=109.09 Aligned_cols=94 Identities=30% Similarity=0.478 Sum_probs=80.2
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhc-CCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSK-GLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
+.+++|+++|||+++|||.++++.|+++|++|++++|+.+..++...++... +.++.++.+|+++++++.+++++
T Consensus 3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~---- 78 (259)
T PRK06125 3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE---- 78 (259)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----
Confidence 3467899999999999999999999999999999999988887777777654 45688899999999999888764
Q ss_pred cCCCCcEEEEcCCCCCcchh
Q 033299 88 FDGKLNILVSSSAKVPFELL 107 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~~~~~ 107 (122)
+ +++|++|||+|.....+.
T Consensus 79 ~-g~id~lv~~ag~~~~~~~ 97 (259)
T PRK06125 79 A-GDIDILVNNAGAIPGGGL 97 (259)
T ss_pred h-CCCCEEEECCCCCCCCCc
Confidence 4 789999999998765443
No 137
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.73 E-value=9.7e-17 Score=109.42 Aligned_cols=91 Identities=22% Similarity=0.219 Sum_probs=78.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHH-cCCCC
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSE-FDGKL 92 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-~~g~i 92 (122)
|+++|||++++||.+++++|+++|++|++++|+.+..++....+. +.++.++.+|+++++++.+++..+.++ + +++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~-~~i 78 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATG-GRL 78 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcC-CCC
Confidence 689999999999999999999999999999999887776655543 356889999999999999999988777 5 789
Q ss_pred cEEEEcCCCCCcchh
Q 033299 93 NILVSSSAKVPFELL 107 (122)
Q Consensus 93 d~lv~~ag~~~~~~~ 107 (122)
|+||||||.......
T Consensus 79 d~vi~~ag~~~~~~~ 93 (260)
T PRK08267 79 DVLFNNAGILRGGPF 93 (260)
T ss_pred CEEEECCCCCCCCcc
Confidence 999999998765443
No 138
>PRK09135 pteridine reductase; Provisional
Probab=99.73 E-value=1.9e-16 Score=106.87 Aligned_cols=95 Identities=25% Similarity=0.286 Sum_probs=78.8
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecC-hhHHHHHHHHHHhc-CCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRN-ETELNERIQEWKSK-GLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
..++++++|||++|+||.+++++|+++|++|++++|+ .+..+.....+... +..+.++.+|+++++++..+++++.+.
T Consensus 3 ~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 82 (249)
T PRK09135 3 TDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAA 82 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999886 44444444445433 235888999999999999999999999
Q ss_pred cCCCCcEEEEcCCCCCcc
Q 033299 88 FDGKLNILVSSSAKVPFE 105 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~~~ 105 (122)
+ +++|+|||+||.....
T Consensus 83 ~-~~~d~vi~~ag~~~~~ 99 (249)
T PRK09135 83 F-GRLDALVNNASSFYPT 99 (249)
T ss_pred c-CCCCEEEECCCCCCCC
Confidence 8 8999999999986543
No 139
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.73 E-value=1.4e-16 Score=106.89 Aligned_cols=94 Identities=26% Similarity=0.369 Sum_probs=80.9
Q ss_pred ccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 8 RWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 8 ~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
++.+++|+++|||++|+||.+++++|+++|++|++++|+.++..+..+++... ...++.+|++|.+++.++++++.+.
T Consensus 2 ~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (239)
T PRK12828 2 EHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD--ALRIGGIDLVDPQAARRAVDEVNRQ 79 (239)
T ss_pred CCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc--CceEEEeecCCHHHHHHHHHHHHHH
Confidence 34577899999999999999999999999999999999887766666555433 3567789999999999999999999
Q ss_pred cCCCCcEEEEcCCCCCc
Q 033299 88 FDGKLNILVSSSAKVPF 104 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~~ 104 (122)
+ +++|++||++|....
T Consensus 80 ~-~~~d~vi~~ag~~~~ 95 (239)
T PRK12828 80 F-GRLDALVNIAGAFVW 95 (239)
T ss_pred h-CCcCEEEECCcccCc
Confidence 8 899999999998654
No 140
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.73 E-value=1.9e-16 Score=107.16 Aligned_cols=91 Identities=27% Similarity=0.348 Sum_probs=78.3
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEe-ecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 13 GMTALVTGGTRGIGHAIVEELTAFGAIVHTC-SRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 13 ~~~~litG~~~~ig~~~~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
.|+++|||+++|||.++++.|+++|++|+++ .|+.+..+....++...+.++.++.||+++.++++++++++.+.+ ++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~ 80 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAF-GR 80 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhc-CC
Confidence 4689999999999999999999999998776 466666666666666555678999999999999999999998888 89
Q ss_pred CcEEEEcCCCCCc
Q 033299 92 LNILVSSSAKVPF 104 (122)
Q Consensus 92 id~lv~~ag~~~~ 104 (122)
+|++|||||....
T Consensus 81 id~li~~ag~~~~ 93 (248)
T PRK06947 81 LDALVNNAGIVAP 93 (248)
T ss_pred CCEEEECCccCCC
Confidence 9999999998743
No 141
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.73 E-value=8.7e-17 Score=110.85 Aligned_cols=90 Identities=20% Similarity=0.193 Sum_probs=76.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
++|+++|||++||||.++++.|+++|++|++++|+.+.++++. .. .+.++.+|++|.+++.++++++.+.++++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~----~~--~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~ 76 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE----AE--GLEAFQLDYAEPESIAALVAQVLELSGGR 76 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----HC--CceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 3689999999999999999999999999999999987655432 22 36788999999999999999988776468
Q ss_pred CcEEEEcCCCCCcchh
Q 033299 92 LNILVSSSAKVPFELL 107 (122)
Q Consensus 92 id~lv~~ag~~~~~~~ 107 (122)
+|++|||||+......
T Consensus 77 id~li~~Ag~~~~~~~ 92 (277)
T PRK05993 77 LDALFNNGAYGQPGAV 92 (277)
T ss_pred ccEEEECCCcCCCCCc
Confidence 9999999998765543
No 142
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.73 E-value=1.3e-16 Score=109.90 Aligned_cols=92 Identities=18% Similarity=0.167 Sum_probs=78.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
++++++|||++||||.+++++|+++|++|++++|+.+....+... .+.++..+.+|++|++++.++++.+.+.+ ++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~~~-~~ 78 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL---HPDRALARLLDVTDFDAIDAVVADAEATF-GP 78 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh---cCCCeeEEEccCCCHHHHHHHHHHHHHHh-CC
Confidence 468899999999999999999999999999999998765544322 23468889999999999999999999998 89
Q ss_pred CcEEEEcCCCCCcchh
Q 033299 92 LNILVSSSAKVPFELL 107 (122)
Q Consensus 92 id~lv~~ag~~~~~~~ 107 (122)
+|+||||||.....+.
T Consensus 79 ~d~vv~~ag~~~~~~~ 94 (277)
T PRK06180 79 IDVLVNNAGYGHEGAI 94 (277)
T ss_pred CCEEEECCCccCCccc
Confidence 9999999998765443
No 143
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.73 E-value=1.4e-16 Score=109.68 Aligned_cols=92 Identities=26% Similarity=0.381 Sum_probs=79.0
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
++|+++|||++|+||.+++++|+++|++|++++|+.+..++....+ +.++.++.+|++|++++.++++++.+.+ ++
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 77 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY---GDRLLPLALDVTDRAAVFAAVETAVEHF-GR 77 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---cCCeeEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence 4689999999999999999999999999999999987765544332 3457788999999999999999999988 89
Q ss_pred CcEEEEcCCCCCcchh
Q 033299 92 LNILVSSSAKVPFELL 107 (122)
Q Consensus 92 id~lv~~ag~~~~~~~ 107 (122)
+|++|||||.....+.
T Consensus 78 ~d~vi~~ag~~~~~~~ 93 (275)
T PRK08263 78 LDIVVNNAGYGLFGMI 93 (275)
T ss_pred CCEEEECCCCcccccc
Confidence 9999999999865543
No 144
>PRK06484 short chain dehydrogenase; Validated
Probab=99.73 E-value=8.9e-17 Score=119.16 Aligned_cols=90 Identities=20% Similarity=0.348 Sum_probs=79.5
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
...+|++||||+++|||.+++++|+++|++|++++|+.+.+++..+++ +.+...+.+|++|++++.++++++.+++
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 341 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL---GDEHLSVQADITDEAAVESAFAQIQARW- 341 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEccCCCHHHHHHHHHHHHHHc-
Confidence 346899999999999999999999999999999999987776665544 3467789999999999999999999999
Q ss_pred CCCcEEEEcCCCCC
Q 033299 90 GKLNILVSSSAKVP 103 (122)
Q Consensus 90 g~id~lv~~ag~~~ 103 (122)
|++|+||||||+..
T Consensus 342 g~id~li~nAg~~~ 355 (520)
T PRK06484 342 GRLDVLVNNAGIAE 355 (520)
T ss_pred CCCCEEEECCCCcC
Confidence 89999999999863
No 145
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.72 E-value=1.4e-16 Score=108.69 Aligned_cols=91 Identities=20% Similarity=0.206 Sum_probs=78.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCC-CeEEEeecChhH-HHHHHHHHHhcCC-eEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFG-AIVHTCSRNETE-LNERIQEWKSKGL-KVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g-~~v~~~~r~~~~-~~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
.+++++||||++|||.+++++|+++| ++|++++|+.+. .++..+++...+. ++.++.+|++|++++.++++++.+ +
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~ 85 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G 85 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c
Confidence 56899999999999999999999985 899999999875 7777777766543 688999999999999999998876 5
Q ss_pred CCCCcEEEEcCCCCCc
Q 033299 89 DGKLNILVSSSAKVPF 104 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~ 104 (122)
+++|++|||+|....
T Consensus 86 -g~id~li~~ag~~~~ 100 (253)
T PRK07904 86 -GDVDVAIVAFGLLGD 100 (253)
T ss_pred -CCCCEEEEeeecCCc
Confidence 789999999998643
No 146
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.72 E-value=2e-16 Score=107.24 Aligned_cols=92 Identities=32% Similarity=0.357 Sum_probs=81.6
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCC
Q 033299 13 GMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKL 92 (122)
Q Consensus 13 ~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~i 92 (122)
+|++||||++|+||.+++++|+++|++|++++|+.+..+.+..++...+.++.++.+|+++++++.++++++.+.+ +++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~ 79 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEF-GGL 79 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc-CCC
Confidence 4689999999999999999999999999999999887777776666555678899999999999999999998888 789
Q ss_pred cEEEEcCCCCCcc
Q 033299 93 NILVSSSAKVPFE 105 (122)
Q Consensus 93 d~lv~~ag~~~~~ 105 (122)
|++||++|.....
T Consensus 80 d~vi~~a~~~~~~ 92 (255)
T TIGR01963 80 DILVNNAGIQHVA 92 (255)
T ss_pred CEEEECCCCCCCC
Confidence 9999999987543
No 147
>PRK06484 short chain dehydrogenase; Validated
Probab=99.72 E-value=1.2e-16 Score=118.56 Aligned_cols=89 Identities=27% Similarity=0.398 Sum_probs=79.4
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
+.++|+++|||+++|||.++++.|+++|++|++++|+.+.+++...++ +.++.++.+|++++++++++++++.+++
T Consensus 2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 77 (520)
T PRK06484 2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---GPDHHALAMDVSDEAQIREGFEQLHREF- 77 (520)
T ss_pred CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEeccCCHHHHHHHHHHHHHHh-
Confidence 356899999999999999999999999999999999988776665554 3467889999999999999999999999
Q ss_pred CCCcEEEEcCCCC
Q 033299 90 GKLNILVSSSAKV 102 (122)
Q Consensus 90 g~id~lv~~ag~~ 102 (122)
+++|+||||||+.
T Consensus 78 g~iD~li~nag~~ 90 (520)
T PRK06484 78 GRIDVLVNNAGVT 90 (520)
T ss_pred CCCCEEEECCCcC
Confidence 8999999999984
No 148
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.72 E-value=1.1e-16 Score=107.68 Aligned_cols=87 Identities=16% Similarity=0.153 Sum_probs=73.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
++|+++|||+++|||.+++++|+++|++|++++|+.+...+ .+... .+.++.+|+++++++.++++++.+++ ++
T Consensus 1 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 74 (236)
T PRK06483 1 MPAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAID---GLRQA--GAQCIQADFSTNAGIMAFIDELKQHT-DG 74 (236)
T ss_pred CCceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHH---HHHHc--CCEEEEcCCCCHHHHHHHHHHHHhhC-CC
Confidence 36799999999999999999999999999999998754332 33222 25678999999999999999999998 89
Q ss_pred CcEEEEcCCCCCc
Q 033299 92 LNILVSSSAKVPF 104 (122)
Q Consensus 92 id~lv~~ag~~~~ 104 (122)
+|++|||||....
T Consensus 75 id~lv~~ag~~~~ 87 (236)
T PRK06483 75 LRAIIHNASDWLA 87 (236)
T ss_pred ccEEEECCccccC
Confidence 9999999998643
No 149
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.72 E-value=1.8e-16 Score=108.96 Aligned_cols=92 Identities=18% Similarity=0.286 Sum_probs=79.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCe-EEEEeecCCCHHHHHHHHHHHHHHcCCCC
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLK-VSGSACDLKIRAERQKLMETVCSEFDGKL 92 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~Dv~~~~~~~~~~~~~~~~~~g~i 92 (122)
|+++|||+++|||.++++.|+++|++|++++|+.+..++..+++...+.+ ..++.+|+++++++.++++++.+.+ +++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 79 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAH-GSM 79 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhc-CCC
Confidence 47999999999999999999999999999999988777777777654443 4568899999999999999999988 899
Q ss_pred cEEEEcCCCCCcch
Q 033299 93 NILVSSSAKVPFEL 106 (122)
Q Consensus 93 d~lv~~ag~~~~~~ 106 (122)
|++|||+|......
T Consensus 80 d~lv~~ag~~~~~~ 93 (272)
T PRK07832 80 DVVMNIAGISAWGT 93 (272)
T ss_pred CEEEECCCCCCCCc
Confidence 99999999875443
No 150
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.72 E-value=3e-16 Score=105.72 Aligned_cols=95 Identities=32% Similarity=0.384 Sum_probs=80.2
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChh-HHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNET-ELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
.+.+|+++|||++|+||.+++++|+++|++|+++.|+.. .......++...+.++.++.+|+++.+++.++++++.+.+
T Consensus 2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF 81 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 456789999999999999999999999999977777644 3455555565556678899999999999999999999888
Q ss_pred CCCCcEEEEcCCCCCcc
Q 033299 89 DGKLNILVSSSAKVPFE 105 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~ 105 (122)
+++|++||++|.....
T Consensus 82 -~~id~vi~~ag~~~~~ 97 (248)
T PRK05557 82 -GGVDILVNNAGITRDN 97 (248)
T ss_pred -CCCCEEEECCCcCCCC
Confidence 7899999999987654
No 151
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.72 E-value=3.1e-16 Score=106.54 Aligned_cols=90 Identities=28% Similarity=0.393 Sum_probs=77.4
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeecCh-hHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 13 GMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNE-TELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 13 ~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
.|+++|||++++||.+++++|+++|++|++++|+. +...+..+.+...+.++.++.+|+++++++.++++.+.+.+ ++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 80 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAW-GR 80 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhc-CC
Confidence 57899999999999999999999999999998764 44445555555445578899999999999999999999998 89
Q ss_pred CcEEEEcCCCCC
Q 033299 92 LNILVSSSAKVP 103 (122)
Q Consensus 92 id~lv~~ag~~~ 103 (122)
+|++|||||...
T Consensus 81 id~vi~~ag~~~ 92 (256)
T PRK12745 81 IDCLVNNAGVGV 92 (256)
T ss_pred CCEEEECCccCC
Confidence 999999999864
No 152
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.72 E-value=1.6e-16 Score=121.22 Aligned_cols=98 Identities=22% Similarity=0.270 Sum_probs=84.6
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhc-C-CeEEEEeecCCCHHHHHHHHHHHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSK-G-LKVSGSACDLKIRAERQKLMETVCS 86 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~Dv~~~~~~~~~~~~~~~ 86 (122)
..+.+|+++|||+++|||.+++++|+++|++|++++|+.+......+++... + .++..+.+|++|++++.++++++.+
T Consensus 410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~ 489 (676)
T TIGR02632 410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL 489 (676)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999988777766666532 2 3577899999999999999999999
Q ss_pred HcCCCCcEEEEcCCCCCcchh
Q 033299 87 EFDGKLNILVSSSAKVPFELL 107 (122)
Q Consensus 87 ~~~g~id~lv~~ag~~~~~~~ 107 (122)
.+ |++|+||||||+....+.
T Consensus 490 ~~-g~iDilV~nAG~~~~~~~ 509 (676)
T TIGR02632 490 AY-GGVDIVVNNAGIATSSPF 509 (676)
T ss_pred hc-CCCcEEEECCCCCCCCCc
Confidence 99 899999999998765443
No 153
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.72 E-value=1.1e-16 Score=109.55 Aligned_cols=87 Identities=28% Similarity=0.327 Sum_probs=76.4
Q ss_pred ccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 8 RWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 8 ~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
.+++++|+++|||+++|||.+++++|+++|++|++++++..... ..++.++.+|++++++++++++++.+.
T Consensus 4 ~~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~~~~ 74 (266)
T PRK06171 4 WLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ---------HENYQFVPTDVSSAEEVNHTVAEIIEK 74 (266)
T ss_pred cccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc---------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 45688999999999999999999999999999999998765421 135778999999999999999999999
Q ss_pred cCCCCcEEEEcCCCCCc
Q 033299 88 FDGKLNILVSSSAKVPF 104 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~~ 104 (122)
+ +++|++|||||....
T Consensus 75 ~-g~id~li~~Ag~~~~ 90 (266)
T PRK06171 75 F-GRIDGLVNNAGINIP 90 (266)
T ss_pred c-CCCCEEEECCcccCC
Confidence 9 899999999998644
No 154
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.72 E-value=3.2e-16 Score=105.52 Aligned_cols=91 Identities=27% Similarity=0.323 Sum_probs=77.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeec-ChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCC
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFGAIVHTCSR-NETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKL 92 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~i 92 (122)
|+++|||++++||.+++++|+++|++|+++.| +.+..++...++...+.++.++.+|+++++++.++++++.+.+ +++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 79 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAEL-GPI 79 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence 68999999999999999999999999988887 5555555555555445578899999999999999999999988 899
Q ss_pred cEEEEcCCCCCcc
Q 033299 93 NILVSSSAKVPFE 105 (122)
Q Consensus 93 d~lv~~ag~~~~~ 105 (122)
|+||||+|.....
T Consensus 80 d~vi~~ag~~~~~ 92 (242)
T TIGR01829 80 DVLVNNAGITRDA 92 (242)
T ss_pred cEEEECCCCCCCC
Confidence 9999999987543
No 155
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.71 E-value=2.1e-16 Score=107.76 Aligned_cols=84 Identities=35% Similarity=0.384 Sum_probs=74.4
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
..+++|+++|||+++|||.++++.|+++|++|++++|+.+.. ...++.++.+|++|+++++++++++.+++
T Consensus 5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (260)
T PRK06523 5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---------LPEGVEFVAADLTTAEGCAAVARAVLERL 75 (260)
T ss_pred cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---------cCCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence 457899999999999999999999999999999999986431 12357889999999999999999999998
Q ss_pred CCCCcEEEEcCCCC
Q 033299 89 DGKLNILVSSSAKV 102 (122)
Q Consensus 89 ~g~id~lv~~ag~~ 102 (122)
+++|++|||||..
T Consensus 76 -~~id~vi~~ag~~ 88 (260)
T PRK06523 76 -GGVDILVHVLGGS 88 (260)
T ss_pred -CCCCEEEECCccc
Confidence 8999999999975
No 156
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.71 E-value=3e-16 Score=107.90 Aligned_cols=90 Identities=21% Similarity=0.336 Sum_probs=77.5
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCC
Q 033299 13 GMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKL 92 (122)
Q Consensus 13 ~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~i 92 (122)
.|++||||++|+||.+++++|+++|++|+++.|+.+..++..+.. +.++.++.+|++|.+++.++++++.+.+ +++
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 77 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY---GDRLWVLQLDVTDSAAVRAVVDRAFAAL-GRI 77 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCceEEEEccCCCHHHHHHHHHHHHHHc-CCC
Confidence 478999999999999999999999999999999987665544332 3468889999999999999999998888 899
Q ss_pred cEEEEcCCCCCcch
Q 033299 93 NILVSSSAKVPFEL 106 (122)
Q Consensus 93 d~lv~~ag~~~~~~ 106 (122)
|+||||||.....+
T Consensus 78 d~vi~~ag~~~~~~ 91 (276)
T PRK06482 78 DVVVSNAGYGLFGA 91 (276)
T ss_pred CEEEECCCCCCCcc
Confidence 99999999876544
No 157
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=99.71 E-value=1e-16 Score=112.03 Aligned_cols=92 Identities=28% Similarity=0.315 Sum_probs=74.2
Q ss_pred cccCCCEEEEecC--CCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhc----------C---CeEEEEeecC--
Q 033299 9 WSLKGMTALVTGG--TRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSK----------G---LKVSGSACDL-- 71 (122)
Q Consensus 9 ~~~~~~~~litG~--~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~----------~---~~~~~~~~Dv-- 71 (122)
+.++||++||||+ ++|||.++++.|++.|++|++ .|+.+.++.....+... + .....+.+|+
T Consensus 5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 83 (303)
T PLN02730 5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF 83 (303)
T ss_pred cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence 4588999999999 799999999999999999988 67777766666555421 1 1145788898
Q ss_pred CC------------------HHHHHHHHHHHHHHcCCCCcEEEEcCCCC
Q 033299 72 KI------------------RAERQKLMETVCSEFDGKLNILVSSSAKV 102 (122)
Q Consensus 72 ~~------------------~~~~~~~~~~~~~~~~g~id~lv~~ag~~ 102 (122)
++ +++++++++++.+++ |++|+||||||+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~-G~iDiLVnNAG~~ 131 (303)
T PLN02730 84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADF-GSIDILVHSLANG 131 (303)
T ss_pred CccccCchhhhcccccccCCHHHHHHHHHHHHHHc-CCCCEEEECCCcc
Confidence 33 448999999999999 8999999999864
No 158
>PLN00015 protochlorophyllide reductase
Probab=99.71 E-value=1.7e-16 Score=111.03 Aligned_cols=86 Identities=17% Similarity=0.168 Sum_probs=76.0
Q ss_pred EEecCCCchHHHHHHHHHHCC-CeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcEE
Q 033299 17 LVTGGTRGIGHAIVEELTAFG-AIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNIL 95 (122)
Q Consensus 17 litG~~~~ig~~~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~l 95 (122)
+|||+++|||.++++.|+++| ++|++++|+.+..++...++...+.++.++.+|+++.++++++++++.+.+ +++|+|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-~~iD~l 79 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSG-RPLDVL 79 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcC-CCCCEE
Confidence 589999999999999999999 999999999887777776665444568889999999999999999998887 799999
Q ss_pred EEcCCCCC
Q 033299 96 VSSSAKVP 103 (122)
Q Consensus 96 v~~ag~~~ 103 (122)
|||||+..
T Consensus 80 InnAG~~~ 87 (308)
T PLN00015 80 VCNAAVYL 87 (308)
T ss_pred EECCCcCC
Confidence 99999864
No 159
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.71 E-value=4.3e-16 Score=106.01 Aligned_cols=91 Identities=25% Similarity=0.321 Sum_probs=79.6
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCC
Q 033299 13 GMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKL 92 (122)
Q Consensus 13 ~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~i 92 (122)
+|+++|||++++||.+++++|+++|++|++++|+.+..+...+.+. +.++.++.+|+++++++.++++++.+++ +++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~ 78 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG--DARFVPVACDLTDAASLAAALANAAAER-GPV 78 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence 5789999999999999999999999999999999887776666553 3468889999999999999999999998 789
Q ss_pred cEEEEcCCCCCcch
Q 033299 93 NILVSSSAKVPFEL 106 (122)
Q Consensus 93 d~lv~~ag~~~~~~ 106 (122)
|++||++|.....+
T Consensus 79 d~vi~~ag~~~~~~ 92 (257)
T PRK07074 79 DVLVANAGAARAAS 92 (257)
T ss_pred CEEEECCCCCCCCC
Confidence 99999999875443
No 160
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.71 E-value=4.8e-16 Score=104.93 Aligned_cols=89 Identities=25% Similarity=0.234 Sum_probs=78.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEE-eecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCC
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFGAIVHT-CSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKL 92 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~i 92 (122)
++++|||++|+||.++++.|+++|++|++ ..|+.+...+...++...+.++.++.+|++|+++++++++++.+.+ +++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~-~~i 80 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHD-EPL 80 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhC-CCC
Confidence 58999999999999999999999999876 4677777777777776666678899999999999999999998888 899
Q ss_pred cEEEEcCCCCC
Q 033299 93 NILVSSSAKVP 103 (122)
Q Consensus 93 d~lv~~ag~~~ 103 (122)
|++|||+|...
T Consensus 81 d~vi~~ag~~~ 91 (247)
T PRK09730 81 AALVNNAGILF 91 (247)
T ss_pred CEEEECCCCCC
Confidence 99999999863
No 161
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=99.71 E-value=3.3e-16 Score=107.35 Aligned_cols=93 Identities=20% Similarity=0.254 Sum_probs=74.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeec-ChhHHHHHHHHHHhc-CCeEEEEeecCCCHHHH----HHHHHHHHHH
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFGAIVHTCSR-NETELNERIQEWKSK-GLKVSGSACDLKIRAER----QKLMETVCSE 87 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~----~~~~~~~~~~ 87 (122)
++++|||+++|||.++++.|+++|++|+++.| +.+.+....+++... +.+..++.+|++|++++ +++++++.+.
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 57999999999999999999999999988764 456666666666432 34677899999999855 5667777777
Q ss_pred cCCCCcEEEEcCCCCCcchh
Q 033299 88 FDGKLNILVSSSAKVPFELL 107 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~~~~~ 107 (122)
+ +++|+||||||.....+.
T Consensus 82 ~-g~iD~lv~nAG~~~~~~~ 100 (267)
T TIGR02685 82 F-GRCDVLVNNASAFYPTPL 100 (267)
T ss_pred c-CCceEEEECCccCCCCcc
Confidence 8 899999999998755443
No 162
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.70 E-value=3.4e-16 Score=106.11 Aligned_cols=88 Identities=22% Similarity=0.287 Sum_probs=76.8
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
+.+++|+++|||++++||.+++++|+++|++|++++|+. +...+.++.++.+|++++++++++++++.+.+
T Consensus 4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 74 (252)
T PRK08220 4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQEDYPFATFVLDVSDAAAVAQVCQRLLAET 74 (252)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 457889999999999999999999999999999999875 12234568899999999999999999999998
Q ss_pred CCCCcEEEEcCCCCCcch
Q 033299 89 DGKLNILVSSSAKVPFEL 106 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~~ 106 (122)
+++|++|||+|.....+
T Consensus 75 -~~id~vi~~ag~~~~~~ 91 (252)
T PRK08220 75 -GPLDVLVNAAGILRMGA 91 (252)
T ss_pred -CCCCEEEECCCcCCCCC
Confidence 89999999999875443
No 163
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.70 E-value=4.8e-16 Score=105.92 Aligned_cols=91 Identities=33% Similarity=0.563 Sum_probs=79.5
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
..+++++++|||++|+||.+++++|+++|++|+++.|+.+..++..+..... ++.++.+|+++++++..+++++.+.+
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA--KVTATVADVADPAQVERVFDTAVERF 84 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC--ceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4567899999999999999999999999999999999887666655544322 57889999999999999999998888
Q ss_pred CCCCcEEEEcCCCC
Q 033299 89 DGKLNILVSSSAKV 102 (122)
Q Consensus 89 ~g~id~lv~~ag~~ 102 (122)
+++|+|||++|..
T Consensus 85 -~~~d~vi~~ag~~ 97 (264)
T PRK12829 85 -GGLDVLVNNAGIA 97 (264)
T ss_pred -CCCCEEEECCCCC
Confidence 8999999999987
No 164
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.70 E-value=1.6e-16 Score=108.86 Aligned_cols=87 Identities=28% Similarity=0.280 Sum_probs=75.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
++++++|||++|+||.+++++|+++|++|++++|+.+.... ..++.++.+|++|+++++++++.+.+++ ++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~~~~~-g~ 73 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP--------IPGVELLELDVTDDASVQAAVDEVIARA-GR 73 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--------cCCCeeEEeecCCHHHHHHHHHHHHHhC-CC
Confidence 35789999999999999999999999999999998654321 1257789999999999999999999999 89
Q ss_pred CcEEEEcCCCCCcchh
Q 033299 92 LNILVSSSAKVPFELL 107 (122)
Q Consensus 92 id~lv~~ag~~~~~~~ 107 (122)
+|+||||||+......
T Consensus 74 ~d~li~~ag~~~~~~~ 89 (270)
T PRK06179 74 IDVLVNNAGVGLAGAA 89 (270)
T ss_pred CCEEEECCCCCCCcCc
Confidence 9999999999765443
No 165
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.70 E-value=4.7e-16 Score=105.86 Aligned_cols=88 Identities=25% Similarity=0.312 Sum_probs=76.3
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
.+++|+++|||++++||.++++.|+++|++|++++|+....++..+++. ..++.+|++++++++++++++.+.+
T Consensus 4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----~~~~~~D~~~~~~~~~~~~~~~~~~- 77 (255)
T PRK06057 4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG-----GLFVPTDVTDEDAVNALFDTAAETY- 77 (255)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-----CcEEEeeCCCHHHHHHHHHHHHHHc-
Confidence 4678999999999999999999999999999999998776555544432 2578899999999999999998888
Q ss_pred CCCcEEEEcCCCCC
Q 033299 90 GKLNILVSSSAKVP 103 (122)
Q Consensus 90 g~id~lv~~ag~~~ 103 (122)
+++|++|||||...
T Consensus 78 ~~id~vi~~ag~~~ 91 (255)
T PRK06057 78 GSVDIAFNNAGISP 91 (255)
T ss_pred CCCCEEEECCCcCC
Confidence 89999999999864
No 166
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.70 E-value=8e-16 Score=103.60 Aligned_cols=95 Identities=28% Similarity=0.403 Sum_probs=78.4
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecC-hhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRN-ETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
++.|+++|||++|+||.+++++|+++|++|++..|+ ....+...+.+...+.++.++.+|+++++++.++++++.+.+
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~- 82 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERF- 82 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHc-
Confidence 456899999999999999999999999998776555 444444555555555678899999999999999999998888
Q ss_pred CCCcEEEEcCCCCCcch
Q 033299 90 GKLNILVSSSAKVPFEL 106 (122)
Q Consensus 90 g~id~lv~~ag~~~~~~ 106 (122)
+++|++||++|......
T Consensus 83 ~~id~vi~~ag~~~~~~ 99 (249)
T PRK12825 83 GRIDILVNNAGIFEDKP 99 (249)
T ss_pred CCCCEEEECCccCCCCC
Confidence 78999999999775544
No 167
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.70 E-value=9.9e-16 Score=103.75 Aligned_cols=100 Identities=25% Similarity=0.284 Sum_probs=84.2
Q ss_pred ccccccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcC-CeEEEEeecCC--CHHHHHHH
Q 033299 4 SREQRWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKG-LKVSGSACDLK--IRAERQKL 80 (122)
Q Consensus 4 ~~~~~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~--~~~~~~~~ 80 (122)
+.+....+++|+++|||++++||.+++++|++.|++|++++|+.+...+..+++...+ .+..++.+|++ +++++.++
T Consensus 3 ~~~~~~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~ 82 (247)
T PRK08945 3 YQPKPDLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQL 82 (247)
T ss_pred cCCcccccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHH
Confidence 3344556789999999999999999999999999999999999888777777776543 35677788886 78899999
Q ss_pred HHHHHHHcCCCCcEEEEcCCCCCc
Q 033299 81 METVCSEFDGKLNILVSSSAKVPF 104 (122)
Q Consensus 81 ~~~~~~~~~g~id~lv~~ag~~~~ 104 (122)
++.+.+.+ +++|+||||||....
T Consensus 83 ~~~~~~~~-~~id~vi~~Ag~~~~ 105 (247)
T PRK08945 83 ADTIEEQF-GRLDGVLHNAGLLGE 105 (247)
T ss_pred HHHHHHHh-CCCCEEEECCcccCC
Confidence 99999888 899999999998643
No 168
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.70 E-value=6.3e-16 Score=104.76 Aligned_cols=90 Identities=28% Similarity=0.388 Sum_probs=74.1
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeec-ChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSR-NETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
|.+++|+++|||++++||.++++.|+++|++|+++.+ +.+..+....++ +.++.++.+|+++++++.++++++.+.
T Consensus 1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (253)
T PRK08642 1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---GDRAIALQADVTDREQVQAMFATATEH 77 (253)
T ss_pred CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999887654 444444443333 246888999999999999999999888
Q ss_pred cCCC-CcEEEEcCCCC
Q 033299 88 FDGK-LNILVSSSAKV 102 (122)
Q Consensus 88 ~~g~-id~lv~~ag~~ 102 (122)
+ ++ +|++|||||+.
T Consensus 78 ~-g~~id~li~~ag~~ 92 (253)
T PRK08642 78 F-GKPITTVVNNALAD 92 (253)
T ss_pred h-CCCCeEEEECCCcc
Confidence 8 65 99999999874
No 169
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.69 E-value=4.1e-16 Score=107.21 Aligned_cols=86 Identities=22% Similarity=0.341 Sum_probs=73.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCc
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLN 93 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id 93 (122)
|+++||||+||||.++++.|+++|++|++++|+.+...... .. .+.++.+|+++++++.++++++.+.+ +++|
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id 74 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA----AA--GFTAVQLDVNDGAALARLAEELEAEH-GGLD 74 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HC--CCeEEEeeCCCHHHHHHHHHHHHHhc-CCCC
Confidence 68999999999999999999999999999999876654332 22 36688999999999999999999988 8999
Q ss_pred EEEEcCCCCCcch
Q 033299 94 ILVSSSAKVPFEL 106 (122)
Q Consensus 94 ~lv~~ag~~~~~~ 106 (122)
++|||||......
T Consensus 75 ~vi~~ag~~~~~~ 87 (274)
T PRK05693 75 VLINNAGYGAMGP 87 (274)
T ss_pred EEEECCCCCCCCC
Confidence 9999999875543
No 170
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.69 E-value=1.1e-15 Score=103.08 Aligned_cols=93 Identities=26% Similarity=0.251 Sum_probs=76.4
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChh-HHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 13 GMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNET-ELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 13 ~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
.|+++|||++++||.+++++|.++|++|++++|+.. ...+....+...+.++.++.+|+++++++.++++++.+++ ++
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-~~ 80 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEE-GP 80 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CC
Confidence 368999999999999999999999999999998853 2333333333334568899999999999999999999998 89
Q ss_pred CcEEEEcCCCCCcch
Q 033299 92 LNILVSSSAKVPFEL 106 (122)
Q Consensus 92 id~lv~~ag~~~~~~ 106 (122)
+|++|||+|......
T Consensus 81 id~vi~~ag~~~~~~ 95 (245)
T PRK12824 81 VDILVNNAGITRDSV 95 (245)
T ss_pred CCEEEECCCCCCCCc
Confidence 999999999875443
No 171
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=99.69 E-value=6.5e-16 Score=104.06 Aligned_cols=90 Identities=23% Similarity=0.268 Sum_probs=77.3
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeecC-hhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcE
Q 033299 16 ALVTGGTRGIGHAIVEELTAFGAIVHTCSRN-ETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNI 94 (122)
Q Consensus 16 ~litG~~~~ig~~~~~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~ 94 (122)
++|||+++|||.++++.|+++|++|++++|+ .+..+...++++..+.++.++.+|+++++++.++++++.+.+ +++|+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i~~ 79 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEH-GAYYG 79 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHc-CCCCE
Confidence 5899999999999999999999999888765 455666666666666679999999999999999999998888 89999
Q ss_pred EEEcCCCCCcch
Q 033299 95 LVSSSAKVPFEL 106 (122)
Q Consensus 95 lv~~ag~~~~~~ 106 (122)
+|||+|.....+
T Consensus 80 li~~ag~~~~~~ 91 (239)
T TIGR01831 80 VVLNAGITRDAA 91 (239)
T ss_pred EEECCCCCCCCc
Confidence 999999876543
No 172
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=99.69 E-value=5.2e-16 Score=106.80 Aligned_cols=92 Identities=28% Similarity=0.227 Sum_probs=76.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhc-CCeEEEEeecCCCHHHHHHHHHHHHHHcCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSK-GLKVSGSACDLKIRAERQKLMETVCSEFDG 90 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g 90 (122)
.|++++|||+++|||.+++++|+++|.+|++++|++++++...+++.+. +.++.++.+|.++.+.+-+-+.+.... .
T Consensus 48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~--~ 125 (312)
T KOG1014|consen 48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG--L 125 (312)
T ss_pred cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC--C
Confidence 4689999999999999999999999999999999999999999999765 457889999999877633333333333 3
Q ss_pred CCcEEEEcCCCCCcc
Q 033299 91 KLNILVSSSAKVPFE 105 (122)
Q Consensus 91 ~id~lv~~ag~~~~~ 105 (122)
.+-+||||+|...+.
T Consensus 126 ~VgILVNNvG~~~~~ 140 (312)
T KOG1014|consen 126 DVGILVNNVGMSYDY 140 (312)
T ss_pred ceEEEEecccccCCC
Confidence 688999999999743
No 173
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.69 E-value=1.8e-15 Score=101.82 Aligned_cols=93 Identities=20% Similarity=0.201 Sum_probs=80.5
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
++++++++|||++++||.++++.|.++|++|++++|+.+..+...+.+... .++.++.+|+++++++.++++++...+
T Consensus 2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 79 (238)
T PRK05786 2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY-GNIHYVVGDVSSTESARNVIEKAAKVL- 79 (238)
T ss_pred CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEECCCCCHHHHHHHHHHHHHHh-
Confidence 467899999999999999999999999999999999988776665555433 357889999999999999999988888
Q ss_pred CCCcEEEEcCCCCCc
Q 033299 90 GKLNILVSSSAKVPF 104 (122)
Q Consensus 90 g~id~lv~~ag~~~~ 104 (122)
+++|.+|+++|....
T Consensus 80 ~~id~ii~~ag~~~~ 94 (238)
T PRK05786 80 NAIDGLVVTVGGYVE 94 (238)
T ss_pred CCCCEEEEcCCCcCC
Confidence 789999999997643
No 174
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.68 E-value=1.3e-15 Score=102.76 Aligned_cols=95 Identities=24% Similarity=0.318 Sum_probs=80.0
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcC-CeEEEEeecCCC--HHHHHHHHHHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKG-LKVSGSACDLKI--RAERQKLMETVC 85 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~--~~~~~~~~~~~~ 85 (122)
..+++|+++|||++++||.++++.|+++|++|++++|+.+..++..+++...+ ....++.+|+++ .+++.++++++.
T Consensus 2 ~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~ 81 (239)
T PRK08703 2 ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIA 81 (239)
T ss_pred CCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999988877777775543 357788999976 567889998888
Q ss_pred HHcCCCCcEEEEcCCCCC
Q 033299 86 SEFDGKLNILVSSSAKVP 103 (122)
Q Consensus 86 ~~~~g~id~lv~~ag~~~ 103 (122)
+.+++++|++|||||...
T Consensus 82 ~~~~~~id~vi~~ag~~~ 99 (239)
T PRK08703 82 EATQGKLDGIVHCAGYFY 99 (239)
T ss_pred HHhCCCCCEEEEeccccc
Confidence 876457999999999753
No 175
>PRK07069 short chain dehydrogenase; Validated
Probab=99.68 E-value=1.1e-15 Score=103.43 Aligned_cols=91 Identities=24% Similarity=0.334 Sum_probs=77.0
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeecC-hhHHHHHHHHHHhcC--CeEEEEeecCCCHHHHHHHHHHHHHHcCCCC
Q 033299 16 ALVTGGTRGIGHAIVEELTAFGAIVHTCSRN-ETELNERIQEWKSKG--LKVSGSACDLKIRAERQKLMETVCSEFDGKL 92 (122)
Q Consensus 16 ~litG~~~~ig~~~~~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~i 92 (122)
++|||++++||.++++.|+++|++|++++|+ .+..++..+++.... ..+..+.+|++++++++++++++.+++ +++
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 80 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAM-GGL 80 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHc-CCc
Confidence 7999999999999999999999999999998 666666666665432 235568899999999999999999999 899
Q ss_pred cEEEEcCCCCCcchh
Q 033299 93 NILVSSSAKVPFELL 107 (122)
Q Consensus 93 d~lv~~ag~~~~~~~ 107 (122)
|++|||||.......
T Consensus 81 d~vi~~ag~~~~~~~ 95 (251)
T PRK07069 81 SVLVNNAGVGSFGAI 95 (251)
T ss_pred cEEEECCCcCCCCCh
Confidence 999999998765544
No 176
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=99.68 E-value=4.3e-16 Score=101.64 Aligned_cols=96 Identities=21% Similarity=0.337 Sum_probs=72.5
Q ss_pred EEEEecCCCchHHHHHHHHHHCC-CeEEEeecCh---hHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCC
Q 033299 15 TALVTGGTRGIGHAIVEELTAFG-AIVHTCSRNE---TELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDG 90 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~~g-~~v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g 90 (122)
++||||+.|+||..++++|+.++ .+|++++|+. ....+..+++...+.++.++.||++|++.+.++++++.+++ +
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~-~ 80 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRF-G 80 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTS-S
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhcc-C
Confidence 78999999999999999999997 4799999982 34556788888888899999999999999999999999998 8
Q ss_pred CCcEEEEcCCCCCcchhhccc
Q 033299 91 KLNILVSSSAKVPFELLISEK 111 (122)
Q Consensus 91 ~id~lv~~ag~~~~~~~~~~~ 111 (122)
+|++|||.||...+..+.+.+
T Consensus 81 ~i~gVih~ag~~~~~~~~~~t 101 (181)
T PF08659_consen 81 PIDGVIHAAGVLADAPIQDQT 101 (181)
T ss_dssp -EEEEEE-------B-GCC--
T ss_pred CcceeeeeeeeecccccccCC
Confidence 999999999998776655444
No 177
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.68 E-value=1.6e-15 Score=102.85 Aligned_cols=85 Identities=26% Similarity=0.411 Sum_probs=74.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCc
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLN 93 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id 93 (122)
++++|||++|+||.++++.|+++|++|++++|+.+.++...+.+ +.++.++.+|+++.+++.++++++.+.+ +++|
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-~~id 76 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEW-RNID 76 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---ccceEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence 36899999999999999999999999999999987766554443 3468889999999999999999999988 8899
Q ss_pred EEEEcCCCC
Q 033299 94 ILVSSSAKV 102 (122)
Q Consensus 94 ~lv~~ag~~ 102 (122)
++|||||..
T Consensus 77 ~vi~~ag~~ 85 (248)
T PRK10538 77 VLVNNAGLA 85 (248)
T ss_pred EEEECCCcc
Confidence 999999975
No 178
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=99.67 E-value=2.2e-15 Score=102.68 Aligned_cols=88 Identities=26% Similarity=0.406 Sum_probs=76.2
Q ss_pred EEEEecCCCchHHHHHHHHHH----CCCeEEEeecChhHHHHHHHHHHhc--CCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 15 TALVTGGTRGIGHAIVEELTA----FGAIVHTCSRNETELNERIQEWKSK--GLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~----~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
+++|||+++|||.+++++|++ +|++|++++|+.+.+++..+++... +.++.++.+|++++++++++++++.+.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 689999999999999999997 7999999999998888887777652 3468889999999999999999998876
Q ss_pred CCCC----cEEEEcCCCCC
Q 033299 89 DGKL----NILVSSSAKVP 103 (122)
Q Consensus 89 ~g~i----d~lv~~ag~~~ 103 (122)
+++ |+||||||+..
T Consensus 82 -g~~~~~~~~lv~nAG~~~ 99 (256)
T TIGR01500 82 -RPKGLQRLLLINNAGTLG 99 (256)
T ss_pred -ccCCCceEEEEeCCcccC
Confidence 543 69999999864
No 179
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=99.67 E-value=3.6e-15 Score=101.09 Aligned_cols=94 Identities=31% Similarity=0.421 Sum_probs=76.8
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhH--HHHHHHHHHhcC-CeEEEEeecCCC-HHHHHHHHHHHH
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETE--LNERIQEWKSKG-LKVSGSACDLKI-RAERQKLMETVC 85 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~--~~~~~~~~~~~~-~~~~~~~~Dv~~-~~~~~~~~~~~~ 85 (122)
.+.++.++|||+++|||.++++.|+.+|++|+++.++.+. .+.........+ ..+.+..+|+++ .++++.+++.+.
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~ 81 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE 81 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence 4678999999999999999999999999998888776543 333333332112 257888899998 999999999999
Q ss_pred HHcCCCCcEEEEcCCCCCc
Q 033299 86 SEFDGKLNILVSSSAKVPF 104 (122)
Q Consensus 86 ~~~~g~id~lv~~ag~~~~ 104 (122)
+.+ |++|++|||||+...
T Consensus 82 ~~~-g~id~lvnnAg~~~~ 99 (251)
T COG1028 82 EEF-GRIDILVNNAGIAGP 99 (251)
T ss_pred HHc-CCCCEEEECCCCCCC
Confidence 999 899999999999875
No 180
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.66 E-value=1.4e-15 Score=107.09 Aligned_cols=91 Identities=21% Similarity=0.249 Sum_probs=71.0
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhc--CCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSK--GLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
..|++++||||++|||.+++++|+++|++|++++|+.+++++..+++... +.++..+.+|+++ ++.+.++++.+.+
T Consensus 51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~ 128 (320)
T PLN02780 51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETI 128 (320)
T ss_pred ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHh
Confidence 35899999999999999999999999999999999999988888887654 2467888999985 1223333333333
Q ss_pred C-CCCcEEEEcCCCCC
Q 033299 89 D-GKLNILVSSSAKVP 103 (122)
Q Consensus 89 ~-g~id~lv~~ag~~~ 103 (122)
+ .++|++|||||+..
T Consensus 129 ~~~didilVnnAG~~~ 144 (320)
T PLN02780 129 EGLDVGVLINNVGVSY 144 (320)
T ss_pred cCCCccEEEEecCcCC
Confidence 1 24779999999874
No 181
>PRK08324 short chain dehydrogenase; Validated
Probab=99.66 E-value=2.2e-15 Score=115.15 Aligned_cols=96 Identities=31% Similarity=0.390 Sum_probs=83.9
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
.+.+|+++|||++|+||.++++.|.++|++|++++|+.+.......++... .++.++.+|+++++++.++++++.+.+
T Consensus 419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~~- 496 (681)
T PRK08324 419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAALAF- 496 (681)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHHHc-
Confidence 357899999999999999999999999999999999988777766666543 468899999999999999999999998
Q ss_pred CCCcEEEEcCCCCCcchh
Q 033299 90 GKLNILVSSSAKVPFELL 107 (122)
Q Consensus 90 g~id~lv~~ag~~~~~~~ 107 (122)
|++|++|||||+....+.
T Consensus 497 g~iDvvI~~AG~~~~~~~ 514 (681)
T PRK08324 497 GGVDIVVSNAGIAISGPI 514 (681)
T ss_pred CCCCEEEECCCCCCCCCh
Confidence 899999999998765543
No 182
>PRK08264 short chain dehydrogenase; Validated
Probab=99.65 E-value=2.5e-15 Score=101.17 Aligned_cols=83 Identities=33% Similarity=0.422 Sum_probs=70.7
Q ss_pred ccccCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHH
Q 033299 8 RWSLKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCS 86 (122)
Q Consensus 8 ~~~~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 86 (122)
|+++++++++|||++|+||.++++.|+++|+ +|++++|+.++..+ .+.++.++.+|+++.+++.++++.
T Consensus 1 ~~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~--- 70 (238)
T PRK08264 1 MMDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------LGPRVVPLQLDVTDPASVAAAAEA--- 70 (238)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------cCCceEEEEecCCCHHHHHHHHHh---
Confidence 3567889999999999999999999999998 99999998765443 234688999999999998887765
Q ss_pred HcCCCCcEEEEcCCCC
Q 033299 87 EFDGKLNILVSSSAKV 102 (122)
Q Consensus 87 ~~~g~id~lv~~ag~~ 102 (122)
+ +++|++||++|..
T Consensus 71 -~-~~id~vi~~ag~~ 84 (238)
T PRK08264 71 -A-SDVTILVNNAGIF 84 (238)
T ss_pred -c-CCCCEEEECCCcC
Confidence 3 6899999999983
No 183
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.65 E-value=4.4e-15 Score=100.37 Aligned_cols=89 Identities=17% Similarity=0.237 Sum_probs=75.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhc-CCeEEEEeecCCCHHHHHHHHHHHHHHcCCCC
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSK-GLKVSGSACDLKIRAERQKLMETVCSEFDGKL 92 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~i 92 (122)
|+++|||+++|||.++++.|+++|++|++++|+.+..+...+++... +.++.++.+|+++++.++++++++. .++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~----~~~ 77 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLP----ALP 77 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh----hcC
Confidence 68999999999999999999999999999999988777766666543 3578899999999999999988764 357
Q ss_pred cEEEEcCCCCCcch
Q 033299 93 NILVSSSAKVPFEL 106 (122)
Q Consensus 93 d~lv~~ag~~~~~~ 106 (122)
|++|||+|......
T Consensus 78 d~vv~~ag~~~~~~ 91 (243)
T PRK07102 78 DIVLIAVGTLGDQA 91 (243)
T ss_pred CEEEECCcCCCCcc
Confidence 99999999875543
No 184
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.65 E-value=4e-15 Score=99.88 Aligned_cols=89 Identities=35% Similarity=0.517 Sum_probs=76.4
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeecCh-hHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcE
Q 033299 16 ALVTGGTRGIGHAIVEELTAFGAIVHTCSRNE-TELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNI 94 (122)
Q Consensus 16 ~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~ 94 (122)
++|||++++||.+++++|+++|++|++++|+. +..+.....+...+.++.++.+|++|++++++++..+.+.+ +++|+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~ 79 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEEL-GPIDI 79 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh-CCCCE
Confidence 58999999999999999999999999998874 45555556666556678899999999999999999998888 89999
Q ss_pred EEEcCCCCCcc
Q 033299 95 LVSSSAKVPFE 105 (122)
Q Consensus 95 lv~~ag~~~~~ 105 (122)
+||++|.....
T Consensus 80 vi~~ag~~~~~ 90 (239)
T TIGR01830 80 LVNNAGITRDN 90 (239)
T ss_pred EEECCCCCCCC
Confidence 99999987543
No 185
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.64 E-value=4.4e-15 Score=100.89 Aligned_cols=87 Identities=20% Similarity=0.223 Sum_probs=72.8
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCC
Q 033299 13 GMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKL 92 (122)
Q Consensus 13 ~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~i 92 (122)
+|+++|||++|+||.++++.|+++|++|+++.|+.+...+........+.++.++.+|++|++++.+++. +++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~i 74 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE-------WDV 74 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc-------CCC
Confidence 5789999999999999999999999999999998877666655555555568899999999998877652 479
Q ss_pred cEEEEcCCCCCcch
Q 033299 93 NILVSSSAKVPFEL 106 (122)
Q Consensus 93 d~lv~~ag~~~~~~ 106 (122)
|+||||||.....+
T Consensus 75 d~vi~~ag~~~~~~ 88 (257)
T PRK09291 75 DVLLNNAGIGEAGA 88 (257)
T ss_pred CEEEECCCcCCCcC
Confidence 99999999876543
No 186
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.64 E-value=6.7e-15 Score=99.30 Aligned_cols=89 Identities=26% Similarity=0.322 Sum_probs=73.2
Q ss_pred cccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHH
Q 033299 7 QRWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCS 86 (122)
Q Consensus 7 ~~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 86 (122)
.++.+++++++|||++++||.++++.|+++|++|++++|+.++.++..+.. ...++.+|+++++++.++++.
T Consensus 3 ~~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~--- 74 (245)
T PRK07060 3 MAFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-----GCEPLRLDVGDDAAIRAALAA--- 74 (245)
T ss_pred cccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeEEEecCCCHHHHHHHHHH---
Confidence 345678899999999999999999999999999999999987665544332 245788999999988887765
Q ss_pred HcCCCCcEEEEcCCCCCcc
Q 033299 87 EFDGKLNILVSSSAKVPFE 105 (122)
Q Consensus 87 ~~~g~id~lv~~ag~~~~~ 105 (122)
+ +++|++|||+|.....
T Consensus 75 -~-~~~d~vi~~ag~~~~~ 91 (245)
T PRK07060 75 -A-GAFDGLVNCAGIASLE 91 (245)
T ss_pred -h-CCCCEEEECCCCCCCC
Confidence 3 7899999999987544
No 187
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.64 E-value=2.7e-15 Score=96.11 Aligned_cols=89 Identities=30% Similarity=0.430 Sum_probs=81.6
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
+.+|-..+|||+++|+|.+.+++|+++|+.|++.+...++-.+..+++ +.++.|...|+++++.+...+.+...+|
T Consensus 6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel---g~~~vf~padvtsekdv~aala~ak~kf- 81 (260)
T KOG1199|consen 6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL---GGKVVFTPADVTSEKDVRAALAKAKAKF- 81 (260)
T ss_pred hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh---CCceEEeccccCcHHHHHHHHHHHHhhc-
Confidence 467889999999999999999999999999999999888777776665 5689999999999999999999999999
Q ss_pred CCCcEEEEcCCCC
Q 033299 90 GKLNILVSSSAKV 102 (122)
Q Consensus 90 g~id~lv~~ag~~ 102 (122)
|++|.+|||||+.
T Consensus 82 grld~~vncagia 94 (260)
T KOG1199|consen 82 GRLDALVNCAGIA 94 (260)
T ss_pred cceeeeeecccee
Confidence 9999999999986
No 188
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.63 E-value=2.1e-15 Score=99.29 Aligned_cols=93 Identities=19% Similarity=0.231 Sum_probs=78.4
Q ss_pred CCEEEEecCC-CchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHH-HcCC
Q 033299 13 GMTALVTGGT-RGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCS-EFDG 90 (122)
Q Consensus 13 ~~~~litG~~-~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~-~~~g 90 (122)
.|.++||||+ ||||.++++.+.+.|+.|+++.|+.+...++..+. .+..+.+|+++++++..+..++.+ .+ |
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~-----gl~~~kLDV~~~~~V~~v~~evr~~~~-G 80 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF-----GLKPYKLDVSKPEEVVTVSGEVRANPD-G 80 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh-----CCeeEEeccCChHHHHHHHHHHhhCCC-C
Confidence 5789999975 78999999999999999999999998877765543 378899999999999999999888 55 8
Q ss_pred CCcEEEEcCCCCCcchhhccc
Q 033299 91 KLNILVSSSAKVPFELLISEK 111 (122)
Q Consensus 91 ~id~lv~~ag~~~~~~~~~~~ 111 (122)
++|+|+||||..=..+..+.+
T Consensus 81 kld~L~NNAG~~C~~Pa~d~~ 101 (289)
T KOG1209|consen 81 KLDLLYNNAGQSCTFPALDAT 101 (289)
T ss_pred ceEEEEcCCCCCcccccccCC
Confidence 999999999987544444443
No 189
>PRK12742 oxidoreductase; Provisional
Probab=99.63 E-value=9.9e-15 Score=98.11 Aligned_cols=86 Identities=29% Similarity=0.365 Sum_probs=67.1
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeec-ChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSR-NETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
.+++|+++|||++++||.++++.|+++|++|+++.+ +.+..+++..++ ...++.+|++|.+++.+++.+ +
T Consensus 3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-----~~~~~~~D~~~~~~~~~~~~~----~ 73 (237)
T PRK12742 3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-----GATAVQTDSADRDAVIDVVRK----S 73 (237)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-----CCeEEecCCCCHHHHHHHHHH----h
Confidence 467899999999999999999999999999887765 444444433322 245778999999988777653 4
Q ss_pred CCCCcEEEEcCCCCCcc
Q 033299 89 DGKLNILVSSSAKVPFE 105 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~ 105 (122)
+++|++|||||.....
T Consensus 74 -~~id~li~~ag~~~~~ 89 (237)
T PRK12742 74 -GALDILVVNAGIAVFG 89 (237)
T ss_pred -CCCcEEEECCCCCCCC
Confidence 7899999999986543
No 190
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=99.62 E-value=1.2e-14 Score=103.61 Aligned_cols=92 Identities=22% Similarity=0.177 Sum_probs=74.2
Q ss_pred cCCCEEEEecCCCchHHH--HHHHHHHCCCeEEEeecChhHH------------HHHHHHHHhcCCeEEEEeecCCCHHH
Q 033299 11 LKGMTALVTGGTRGIGHA--IVEELTAFGAIVHTCSRNETEL------------NERIQEWKSKGLKVSGSACDLKIRAE 76 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~--~~~~l~~~g~~v~~~~r~~~~~------------~~~~~~~~~~~~~~~~~~~Dv~~~~~ 76 (122)
..+|++||||+++|||.+ +++.| ..|++|+++++..+.. +...+.+...+..+..+.||+++.++
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 346899999999999999 89999 9999988887532221 12333344445567889999999999
Q ss_pred HHHHHHHHHHHcCCCCcEEEEcCCCCCc
Q 033299 77 RQKLMETVCSEFDGKLNILVSSSAKVPF 104 (122)
Q Consensus 77 ~~~~~~~~~~~~~g~id~lv~~ag~~~~ 104 (122)
++++++++.+++ |+||+||||+|....
T Consensus 118 v~~lie~I~e~~-G~IDiLVnSaA~~~r 144 (398)
T PRK13656 118 KQKVIELIKQDL-GQVDLVVYSLASPRR 144 (398)
T ss_pred HHHHHHHHHHhc-CCCCEEEECCccCCC
Confidence 999999999999 899999999998844
No 191
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=99.61 E-value=6.9e-15 Score=97.37 Aligned_cols=99 Identities=18% Similarity=0.214 Sum_probs=76.8
Q ss_pred CCEEEEecCCCchHHHHHHHHHHC-CCeE-EEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC-
Q 033299 13 GMTALVTGGTRGIGHAIVEELTAF-GAIV-HTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD- 89 (122)
Q Consensus 13 ~~~~litG~~~~ig~~~~~~l~~~-g~~v-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~- 89 (122)
.+.++||||++|||..++++|.+. |-.+ +...|+.++..+..+.+.....+++++++||++.++++.+++++.+-.+
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~ 82 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS 82 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence 356999999999999999999975 5554 4556777776555555544567899999999999999999999988731
Q ss_pred CCCcEEEEcCCCCCcchhhccc
Q 033299 90 GKLNILVSSSAKVPFELLISEK 111 (122)
Q Consensus 90 g~id~lv~~ag~~~~~~~~~~~ 111 (122)
..+++|+||||+...-....++
T Consensus 83 ~GlnlLinNaGi~~~y~~~~~~ 104 (249)
T KOG1611|consen 83 DGLNLLINNAGIALSYNTVLKP 104 (249)
T ss_pred CCceEEEeccceeeecccccCC
Confidence 3599999999998654443433
No 192
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=99.61 E-value=1.8e-14 Score=95.58 Aligned_cols=102 Identities=28% Similarity=0.317 Sum_probs=86.1
Q ss_pred cccCCCEEEEecC--CCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHH
Q 033299 9 WSLKGMTALVTGG--TRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCS 86 (122)
Q Consensus 9 ~~~~~~~~litG~--~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 86 (122)
..++||++||+|- ..+|+..+++.|.++|+++++++.++ ++++.+.++.+.......++|||++.++++++|.++.+
T Consensus 2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~ 80 (259)
T COG0623 2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKK 80 (259)
T ss_pred CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHH
Confidence 4688999999995 47999999999999999999988776 67777777765544577899999999999999999999
Q ss_pred HcCCCCcEEEEcCCCCCcchhhcccc
Q 033299 87 EFDGKLNILVSSSAKVPFELLISEKL 112 (122)
Q Consensus 87 ~~~g~id~lv~~ag~~~~~~~~~~~~ 112 (122)
++ |.+|+|||+-|+.+.........
T Consensus 81 ~~-g~lD~lVHsIaFa~k~el~G~~~ 105 (259)
T COG0623 81 KW-GKLDGLVHSIAFAPKEELKGDYL 105 (259)
T ss_pred hh-CcccEEEEEeccCChHHhCCccc
Confidence 99 89999999999987554443333
No 193
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.61 E-value=1.2e-14 Score=97.41 Aligned_cols=84 Identities=29% Similarity=0.376 Sum_probs=71.2
Q ss_pred EEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcEEE
Q 033299 17 LVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILV 96 (122)
Q Consensus 17 litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~lv 96 (122)
+|||++++||.+++++|+++|++|++++|+.+......+++. .+.++.++.+|+++++++.+++++ + +++|++|
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~----~-~~id~li 74 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALG-GGAPVRTAALDITDEAAVDAFFAE----A-GPFDHVV 74 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHh----c-CCCCEEE
Confidence 589999999999999999999999999999877766655554 245688899999999999888876 3 7899999
Q ss_pred EcCCCCCcch
Q 033299 97 SSSAKVPFEL 106 (122)
Q Consensus 97 ~~ag~~~~~~ 106 (122)
||+|.....+
T Consensus 75 ~~ag~~~~~~ 84 (230)
T PRK07041 75 ITAADTPGGP 84 (230)
T ss_pred ECCCCCCCCC
Confidence 9999876543
No 194
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=99.61 E-value=4.9e-15 Score=102.20 Aligned_cols=95 Identities=20% Similarity=0.149 Sum_probs=80.1
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
..+.+|.++||||.+|+|..+|++|.++|+.|++....++..+.+..+.. ..+...+++||+++++++++.+.+.++.
T Consensus 25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~--s~rl~t~~LDVT~~esi~~a~~~V~~~l 102 (322)
T KOG1610|consen 25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK--SPRLRTLQLDVTKPESVKEAAQWVKKHL 102 (322)
T ss_pred cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc--CCcceeEeeccCCHHHHHHHHHHHHHhc
Confidence 35678899999999999999999999999999988877777666665553 4678888999999999999999998886
Q ss_pred CC-CCcEEEEcCCCCCcc
Q 033299 89 DG-KLNILVSSSAKVPFE 105 (122)
Q Consensus 89 ~g-~id~lv~~ag~~~~~ 105 (122)
+. .+..||||||+....
T Consensus 103 ~~~gLwglVNNAGi~~~~ 120 (322)
T KOG1610|consen 103 GEDGLWGLVNNAGISGFL 120 (322)
T ss_pred ccccceeEEecccccccc
Confidence 22 499999999977443
No 195
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.61 E-value=1.4e-14 Score=105.94 Aligned_cols=92 Identities=29% Similarity=0.337 Sum_probs=74.7
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecCh--hHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNE--TELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
.+++++++|||+++|||.+++++|.++|++|+++++.. +...+..+++ ...++.+|+++++++.++++.+.++
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~-----~~~~~~~Dv~~~~~~~~~~~~~~~~ 281 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV-----GGTALALDITAPDAPARIAEHLAER 281 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHh
Confidence 35789999999999999999999999999999988743 2233332222 2357889999999999999999998
Q ss_pred cCCCCcEEEEcCCCCCcchh
Q 033299 88 FDGKLNILVSSSAKVPFELL 107 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~~~~~ 107 (122)
+ +++|++|||||+......
T Consensus 282 ~-g~id~vi~~AG~~~~~~~ 300 (450)
T PRK08261 282 H-GGLDIVVHNAGITRDKTL 300 (450)
T ss_pred C-CCCCEEEECCCcCCCCCh
Confidence 8 799999999998865443
No 196
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.59 E-value=2.5e-14 Score=91.42 Aligned_cols=91 Identities=24% Similarity=0.325 Sum_probs=74.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-eEEEeecChhHHHHH---HHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRNETELNER---IQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
++++|||++++||.++++.|.++|+ .|+++.|+.+..+.. ..+++..+.++.++.+|+++++.+.++++++.+.+
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 79 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARL- 79 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 5789999999999999999999986 688888875433222 24444456678889999999999999999998888
Q ss_pred CCCcEEEEcCCCCCcc
Q 033299 90 GKLNILVSSSAKVPFE 105 (122)
Q Consensus 90 g~id~lv~~ag~~~~~ 105 (122)
+++|++||++|.....
T Consensus 80 ~~id~li~~ag~~~~~ 95 (180)
T smart00822 80 GPLRGVIHAAGVLDDG 95 (180)
T ss_pred CCeeEEEEccccCCcc
Confidence 8999999999987544
No 197
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.58 E-value=5.7e-15 Score=103.16 Aligned_cols=94 Identities=26% Similarity=0.338 Sum_probs=63.8
Q ss_pred ccccCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHH----------hcCC-----eEEEEeec
Q 033299 8 RWSLKGMTALVTGGT--RGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWK----------SKGL-----KVSGSACD 70 (122)
Q Consensus 8 ~~~~~~~~~litG~~--~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~----------~~~~-----~~~~~~~D 70 (122)
+..++||+++|||++ +|||+++++.|+++|++|++.++.+ .+....+... ..+. ++..+.+|
T Consensus 3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 81 (299)
T PRK06300 3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDAS 81 (299)
T ss_pred CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhh
Confidence 456789999999996 9999999999999999999976541 1111100000 0000 11112233
Q ss_pred CCCH------------------HHHHHHHHHHHHHcCCCCcEEEEcCCCCC
Q 033299 71 LKIR------------------AERQKLMETVCSEFDGKLNILVSSSAKVP 103 (122)
Q Consensus 71 v~~~------------------~~~~~~~~~~~~~~~g~id~lv~~ag~~~ 103 (122)
+++. ++++++++++.+++ |++|+||||||+..
T Consensus 82 ~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~-G~lDvLVnNAG~~~ 131 (299)
T PRK06300 82 FDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDF-GHIDILVHSLANSP 131 (299)
T ss_pred cCCCEEeecccCccccccCCCHHHHHHHHHHHHHHc-CCCcEEEECCCcCc
Confidence 3332 45899999999999 89999999999753
No 198
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.58 E-value=5.1e-15 Score=94.87 Aligned_cols=95 Identities=31% Similarity=0.289 Sum_probs=79.8
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
++.|+.+++||+..|||.+++..|++.|++|+.+.|++..+..+..+... -+..+..|+++++.+.+.+-..
T Consensus 4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~---~I~Pi~~Dls~wea~~~~l~~v----- 75 (245)
T KOG1207|consen 4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPS---LIIPIVGDLSAWEALFKLLVPV----- 75 (245)
T ss_pred cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCc---ceeeeEecccHHHHHHHhhccc-----
Confidence 57899999999999999999999999999999999999988887776543 3888999999987766665443
Q ss_pred CCCcEEEEcCCCCCcchhhcccc
Q 033299 90 GKLNILVSSSAKVPFELLISEKL 112 (122)
Q Consensus 90 g~id~lv~~ag~~~~~~~~~~~~ 112 (122)
+++|.+|||||+...+++.+-+.
T Consensus 76 ~pidgLVNNAgvA~~~pf~eiT~ 98 (245)
T KOG1207|consen 76 FPIDGLVNNAGVATNHPFGEITQ 98 (245)
T ss_pred CchhhhhccchhhhcchHHHHhH
Confidence 68999999999987776655443
No 199
>PRK12367 short chain dehydrogenase; Provisional
Probab=99.57 E-value=1.1e-14 Score=99.15 Aligned_cols=83 Identities=17% Similarity=0.184 Sum_probs=63.8
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
.++++|+++|||+++|||.++++.|+++|++|++++|+.....+ ... .. ...++.+|+++.+.+.+. +
T Consensus 10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~~-~~-~~~~~~~D~~~~~~~~~~-------~ 77 (245)
T PRK12367 10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SND-ES-PNEWIKWECGKEESLDKQ-------L 77 (245)
T ss_pred HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hhc-cC-CCeEEEeeCCCHHHHHHh-------c
Confidence 35678999999999999999999999999999999987632111 111 11 125678999999876543 4
Q ss_pred CCCCcEEEEcCCCCCc
Q 033299 89 DGKLNILVSSSAKVPF 104 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~ 104 (122)
+++|++|||||+...
T Consensus 78 -~~iDilVnnAG~~~~ 92 (245)
T PRK12367 78 -ASLDVLILNHGINPG 92 (245)
T ss_pred -CCCCEEEECCccCCc
Confidence 789999999998643
No 200
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=99.57 E-value=3.3e-14 Score=96.12 Aligned_cols=83 Identities=31% Similarity=0.515 Sum_probs=72.5
Q ss_pred cCC--CchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhc-CCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcEEE
Q 033299 20 GGT--RGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSK-GLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILV 96 (122)
Q Consensus 20 G~~--~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~lv 96 (122)
|++ +|||.++++.|+++|++|++++|+.++.++..+++... +.+ ++.+|++++++++++++++.++++|++|+||
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV 78 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVERFGGRIDILV 78 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHHHCSSESEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhhcCCCeEEEE
Confidence 555 99999999999999999999999999876767676654 333 5999999999999999999999756899999
Q ss_pred EcCCCCCc
Q 033299 97 SSSAKVPF 104 (122)
Q Consensus 97 ~~ag~~~~ 104 (122)
||+|....
T Consensus 79 ~~a~~~~~ 86 (241)
T PF13561_consen 79 NNAGISPP 86 (241)
T ss_dssp EEEESCTG
T ss_pred eccccccc
Confidence 99998876
No 201
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.56 E-value=7.3e-14 Score=101.01 Aligned_cols=85 Identities=28% Similarity=0.366 Sum_probs=68.0
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
+++++|+++|||++||||.++++.|+++|++|++++|+.++..+.. ......+..+.+|++|++++.+.+
T Consensus 174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~---~~~~~~v~~v~~Dvsd~~~v~~~l------- 243 (406)
T PRK07424 174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI---NGEDLPVKTLHWQVGQEAALAELL------- 243 (406)
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---hhcCCCeEEEEeeCCCHHHHHHHh-------
Confidence 4578899999999999999999999999999999999876543322 222234678899999998876544
Q ss_pred CCCCcEEEEcCCCCCc
Q 033299 89 DGKLNILVSSSAKVPF 104 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~ 104 (122)
+++|++|||||+...
T Consensus 244 -~~IDiLInnAGi~~~ 258 (406)
T PRK07424 244 -EKVDILIINHGINVH 258 (406)
T ss_pred -CCCCEEEECCCcCCC
Confidence 689999999998643
No 202
>PRK08017 oxidoreductase; Provisional
Probab=99.55 E-value=1e-13 Score=94.12 Aligned_cols=87 Identities=22% Similarity=0.226 Sum_probs=71.8
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCC
Q 033299 13 GMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKL 92 (122)
Q Consensus 13 ~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~i 92 (122)
.|+++|||++|+||.++++.|+++|++|++++|+.++.+... .. .+..+.+|+++++++..+++++.+..++++
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~----~~--~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~ 75 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN----SL--GFTGILLDLDDPESVERAADEVIALTDNRL 75 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH----hC--CCeEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence 368999999999999999999999999999999887654332 22 366789999999999999998876543679
Q ss_pred cEEEEcCCCCCcc
Q 033299 93 NILVSSSAKVPFE 105 (122)
Q Consensus 93 d~lv~~ag~~~~~ 105 (122)
|++|||+|.....
T Consensus 76 ~~ii~~ag~~~~~ 88 (256)
T PRK08017 76 YGLFNNAGFGVYG 88 (256)
T ss_pred eEEEECCCCCCcc
Confidence 9999999976543
No 203
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.55 E-value=5.1e-14 Score=95.16 Aligned_cols=85 Identities=24% Similarity=0.307 Sum_probs=68.2
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHH-HHHHcC--CC
Q 033299 15 TALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMET-VCSEFD--GK 91 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~-~~~~~~--g~ 91 (122)
.++|||++|+||.+++++|+++|++|++++|+.+.. . ....+.++.++.+|+++.+++++++.+ +.+.++ ++
T Consensus 3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~ 77 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L---AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGAS 77 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h---hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCC
Confidence 689999999999999999999999999999876531 1 122345788999999999999998776 444441 37
Q ss_pred CcEEEEcCCCCCc
Q 033299 92 LNILVSSSAKVPF 104 (122)
Q Consensus 92 id~lv~~ag~~~~ 104 (122)
+|++|||+|....
T Consensus 78 ~~~~v~~ag~~~~ 90 (243)
T PRK07023 78 RVLLINNAGTVEP 90 (243)
T ss_pred ceEEEEcCcccCC
Confidence 9999999998654
No 204
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.55 E-value=6.1e-14 Score=94.79 Aligned_cols=81 Identities=20% Similarity=0.283 Sum_probs=67.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCc
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLN 93 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id 93 (122)
++++|||++||||.+++++|+++|++|++++|+.+..++..+ ...++.++.||++++++++++++++. ..+|
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~----~~~d 73 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT----QSANIFTLAFDVTDHPGTKAALSQLP----FIPE 73 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----hcCCCeEEEeeCCCHHHHHHHHHhcc----cCCC
Confidence 679999999999999999999999999999999766554432 23457889999999999999988752 3479
Q ss_pred EEEEcCCCC
Q 033299 94 ILVSSSAKV 102 (122)
Q Consensus 94 ~lv~~ag~~ 102 (122)
.+|||||..
T Consensus 74 ~~i~~ag~~ 82 (240)
T PRK06101 74 LWIFNAGDC 82 (240)
T ss_pred EEEEcCccc
Confidence 999999975
No 205
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=99.54 E-value=1.3e-13 Score=92.99 Aligned_cols=93 Identities=19% Similarity=0.227 Sum_probs=81.8
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCC-----CeEEEeecChhHHHHHHHHHHhcC----CeEEEEeecCCCHHHHHHHHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFG-----AIVHTCSRNETELNERIQEWKSKG----LKVSGSACDLKIRAERQKLME 82 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g-----~~v~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~~~~~~~ 82 (122)
+.|.++|||+++|||.++|.+|++.. ..+.+++|+.++.++....+.... .++.++..|+++-.++.++..
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~ 81 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK 81 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence 46899999999999999999998753 247788999999999988887642 367889999999999999999
Q ss_pred HHHHHcCCCCcEEEEcCCCCCcc
Q 033299 83 TVCSEFDGKLNILVSSSAKVPFE 105 (122)
Q Consensus 83 ~~~~~~~g~id~lv~~ag~~~~~ 105 (122)
++.+++ .++|.++-|||++...
T Consensus 82 di~~rf-~~ld~iylNAg~~~~~ 103 (341)
T KOG1478|consen 82 DIKQRF-QRLDYIYLNAGIMPNP 103 (341)
T ss_pred HHHHHh-hhccEEEEccccCCCC
Confidence 999999 8999999999998755
No 206
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.54 E-value=1.1e-13 Score=92.95 Aligned_cols=82 Identities=23% Similarity=0.297 Sum_probs=69.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
.+|.++|||++++||.+++++|+++|++|++++|+.+. .. ...++.+|++++++++++++++.+.+ +
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~------~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~--~ 68 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID------DF-----PGELFACDLADIEQTAATLAQINEIH--P 68 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc------cc-----CceEEEeeCCCHHHHHHHHHHHHHhC--C
Confidence 46899999999999999999999999999999998653 11 12467899999999999999988875 5
Q ss_pred CcEEEEcCCCCCcch
Q 033299 92 LNILVSSSAKVPFEL 106 (122)
Q Consensus 92 id~lv~~ag~~~~~~ 106 (122)
+|++|||+|.....+
T Consensus 69 ~d~vi~~ag~~~~~~ 83 (234)
T PRK07577 69 VDAIVNNVGIALPQP 83 (234)
T ss_pred CcEEEECCCCCCCCC
Confidence 899999999876544
No 207
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.54 E-value=1e-13 Score=93.98 Aligned_cols=86 Identities=23% Similarity=0.325 Sum_probs=69.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeecCh-hHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC-
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNE-TELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK- 91 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~- 91 (122)
|+++|||++||||.++++.|+++|++|++++|+. +.+.+..+ ..+.++.++.+|+++++++.++++++.+.+ +.
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~ 77 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE---QYNSNLTFHSLDLQDVHELETNFNEILSSI-QED 77 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh---ccCCceEEEEecCCCHHHHHHHHHHHHHhc-Ccc
Confidence 6899999999999999999999999999999986 33332221 224568889999999999999999987766 32
Q ss_pred -Cc--EEEEcCCCCC
Q 033299 92 -LN--ILVSSSAKVP 103 (122)
Q Consensus 92 -id--~lv~~ag~~~ 103 (122)
++ ++|+|+|...
T Consensus 78 ~~~~~~~v~~ag~~~ 92 (251)
T PRK06924 78 NVSSIHLINNAGMVA 92 (251)
T ss_pred cCCceEEEEcceecc
Confidence 22 8999999864
No 208
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.54 E-value=1.1e-13 Score=92.66 Aligned_cols=82 Identities=22% Similarity=0.286 Sum_probs=68.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCc
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLN 93 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id 93 (122)
|+++|||++++||.+++++|+++|++|++++|+.+..++. .++ .++.++.+|++|++++.++++.+.+ +++|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~----~~~~~~~~D~~d~~~~~~~~~~~~~---~~id 73 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL-QAL----PGVHIEKLDMNDPASLDQLLQRLQG---QRFD 73 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH-Hhc----cccceEEcCCCCHHHHHHHHHHhhc---CCCC
Confidence 6899999999999999999999999999999987665433 221 2467788999999999999988742 4799
Q ss_pred EEEEcCCCCC
Q 033299 94 ILVSSSAKVP 103 (122)
Q Consensus 94 ~lv~~ag~~~ 103 (122)
++|||||+..
T Consensus 74 ~vi~~ag~~~ 83 (225)
T PRK08177 74 LLFVNAGISG 83 (225)
T ss_pred EEEEcCcccC
Confidence 9999999864
No 209
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=99.53 E-value=1.6e-13 Score=115.30 Aligned_cols=98 Identities=14% Similarity=0.203 Sum_probs=78.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHC-CCeEEEeecCh-------------------------------------------
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAF-GAIVHTCSRNE------------------------------------------- 47 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~-g~~v~~~~r~~------------------------------------------- 47 (122)
.++++|||||++|||.+++++|+++ |++|++++|+.
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 5789999999999999999999987 68999999882
Q ss_pred ----hHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcEEEEcCCCCCcchhhccc
Q 033299 48 ----TELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVSSSAKVPFELLISEK 111 (122)
Q Consensus 48 ----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~ 111 (122)
.+..+..+.+...+.++.++.||++|.+.+++++.++.++ ++||+||||||+...+.+.+.+
T Consensus 2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~--g~IDgVVhnAGv~~~~~i~~~t 2141 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT--LQITGIIHGAGVLADKHIQDKT 2141 (2582)
T ss_pred cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh--CCCcEEEECCccCCCCCcccCC
Confidence 1112223344445678899999999999999999998776 4799999999998766554433
No 210
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.53 E-value=1.7e-13 Score=91.96 Aligned_cols=79 Identities=24% Similarity=0.303 Sum_probs=66.6
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcE
Q 033299 15 TALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNI 94 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~ 94 (122)
.++|||+++|||.++++.|+++|++|++++|+.+++.+..+++ ++.++.+|++++++++++++++. +++|+
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~----~~id~ 72 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFP----HHLDT 72 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHh----hcCcE
Confidence 4899999999999999999999999999999987766554443 25578899999999999987763 36899
Q ss_pred EEEcCCCC
Q 033299 95 LVSSSAKV 102 (122)
Q Consensus 95 lv~~ag~~ 102 (122)
+|||||..
T Consensus 73 lv~~ag~~ 80 (223)
T PRK05884 73 IVNVPAPS 80 (223)
T ss_pred EEECCCcc
Confidence 99999863
No 211
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.52 E-value=2e-13 Score=91.03 Aligned_cols=83 Identities=29% Similarity=0.368 Sum_probs=68.3
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCC
Q 033299 13 GMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKL 92 (122)
Q Consensus 13 ~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~i 92 (122)
.|+++|||++|+||.++++.|+++ ++|++++|+.+..++..+.. ..+.++.+|++|++++.+++... +++
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~-----~~i 72 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL----PGATPFPVDLTDPEAIAAAVEQL-----GRL 72 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh----ccceEEecCCCCHHHHHHHHHhc-----CCC
Confidence 478999999999999999999999 99999999977655443322 24778899999999988887653 589
Q ss_pred cEEEEcCCCCCcc
Q 033299 93 NILVSSSAKVPFE 105 (122)
Q Consensus 93 d~lv~~ag~~~~~ 105 (122)
|+|||++|.....
T Consensus 73 d~vi~~ag~~~~~ 85 (227)
T PRK08219 73 DVLVHNAGVADLG 85 (227)
T ss_pred CEEEECCCcCCCC
Confidence 9999999986543
No 212
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.52 E-value=9.9e-14 Score=98.51 Aligned_cols=86 Identities=22% Similarity=0.132 Sum_probs=68.3
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCC
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDG 90 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g 90 (122)
+++|.+||||++|+||.++++.|+++|++|++++|+..........+. ...++.++.+|+++.+.+.+++++ .
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~------~ 74 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN-LAKKIEDHFGDIRDAAKLRKAIAE------F 74 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh-hcCCceEEEccCCCHHHHHHHHhh------c
Confidence 457899999999999999999999999999999987654433322232 123577889999999999888875 2
Q ss_pred CCcEEEEcCCCCC
Q 033299 91 KLNILVSSSAKVP 103 (122)
Q Consensus 91 ~id~lv~~ag~~~ 103 (122)
++|+|||+||...
T Consensus 75 ~~d~vih~A~~~~ 87 (349)
T TIGR02622 75 KPEIVFHLAAQPL 87 (349)
T ss_pred CCCEEEECCcccc
Confidence 6899999999653
No 213
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.51 E-value=1.3e-13 Score=92.56 Aligned_cols=78 Identities=22% Similarity=0.223 Sum_probs=63.5
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
.+++|+++|||++++||.+++++|+++|++|++++|+.... ...++.++.+|++++ ++++.+.+
T Consensus 2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~------~~~~~~~~- 65 (235)
T PRK06550 2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---------LSGNFHFLQLDLSDD------LEPLFDWV- 65 (235)
T ss_pred CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---------cCCcEEEEECChHHH------HHHHHHhh-
Confidence 47789999999999999999999999999999999875321 123578899999987 44444556
Q ss_pred CCCcEEEEcCCCCC
Q 033299 90 GKLNILVSSSAKVP 103 (122)
Q Consensus 90 g~id~lv~~ag~~~ 103 (122)
+++|++|||||...
T Consensus 66 ~~id~lv~~ag~~~ 79 (235)
T PRK06550 66 PSVDILCNTAGILD 79 (235)
T ss_pred CCCCEEEECCCCCC
Confidence 79999999999763
No 214
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.50 E-value=4.7e-13 Score=99.74 Aligned_cols=86 Identities=22% Similarity=0.307 Sum_probs=70.8
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHh-----cC----CeEEEEeecCCCHHHHHHH
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKS-----KG----LKVSGSACDLKIRAERQKL 80 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-----~~----~~~~~~~~Dv~~~~~~~~~ 80 (122)
..++|+++||||+|+||.+++++|++.|++|+++.|+.++.+.+..++.. .+ .++.++.+|+++.+.+.+.
T Consensus 77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a 156 (576)
T PLN03209 77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA 156 (576)
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence 34688999999999999999999999999999999998887766555432 11 3578999999999887654
Q ss_pred HHHHHHHcCCCCcEEEEcCCCCC
Q 033299 81 METVCSEFDGKLNILVSSSAKVP 103 (122)
Q Consensus 81 ~~~~~~~~~g~id~lv~~ag~~~ 103 (122)
+ +.+|+|||++|...
T Consensus 157 L--------ggiDiVVn~AG~~~ 171 (576)
T PLN03209 157 L--------GNASVVICCIGASE 171 (576)
T ss_pred h--------cCCCEEEEcccccc
Confidence 4 67999999999764
No 215
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.50 E-value=1.7e-13 Score=96.65 Aligned_cols=83 Identities=19% Similarity=0.216 Sum_probs=65.8
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHCC--CeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAFG--AIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
+++|+++|||++|+||.++++.|+++| +.|++++|+........+.+. ..++.++.+|++|++.+.+++
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~------- 72 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP--APCLRFFIGDVRDKERLTRAL------- 72 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHH-------
Confidence 357899999999999999999999986 689888887655433333332 236888999999999888776
Q ss_pred CCCCcEEEEcCCCCC
Q 033299 89 DGKLNILVSSSAKVP 103 (122)
Q Consensus 89 ~g~id~lv~~ag~~~ 103 (122)
..+|+|||+||...
T Consensus 73 -~~iD~Vih~Ag~~~ 86 (324)
T TIGR03589 73 -RGVDYVVHAAALKQ 86 (324)
T ss_pred -hcCCEEEECcccCC
Confidence 35899999999764
No 216
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.50 E-value=1.6e-13 Score=96.37 Aligned_cols=84 Identities=15% Similarity=0.099 Sum_probs=66.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHh--cCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKS--KGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
.+|++||||++|+||.+++++|+++|++|+++.|+............. ...++.++.+|+++++.+.+++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-------- 75 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAI-------- 75 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHH--------
Confidence 478999999999999999999999999999888876554433222211 1236888999999999888777
Q ss_pred CCCcEEEEcCCCCC
Q 033299 90 GKLNILVSSSAKVP 103 (122)
Q Consensus 90 g~id~lv~~ag~~~ 103 (122)
..+|+|||+||...
T Consensus 76 ~~~d~vih~A~~~~ 89 (325)
T PLN02989 76 DGCETVFHTASPVA 89 (325)
T ss_pred cCCCEEEEeCCCCC
Confidence 35899999999753
No 217
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.50 E-value=2.8e-13 Score=94.66 Aligned_cols=88 Identities=20% Similarity=0.229 Sum_probs=75.5
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHH--HHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNE--RIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
.++.++||||+|+||.++++.|+.+||.|..+.|+++.... .+.+++....+...+..|+.|+++++.++
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai-------- 76 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAI-------- 76 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHH--------
Confidence 67899999999999999999999999999999999876443 45566656667999999999999999998
Q ss_pred CCCcEEEEcCCCCCcchh
Q 033299 90 GKLNILVSSSAKVPFELL 107 (122)
Q Consensus 90 g~id~lv~~ag~~~~~~~ 107 (122)
..+|+|+|.|........
T Consensus 77 ~gcdgVfH~Asp~~~~~~ 94 (327)
T KOG1502|consen 77 DGCDGVFHTASPVDFDLE 94 (327)
T ss_pred hCCCEEEEeCccCCCCCC
Confidence 459999999998876543
No 218
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.49 E-value=2.1e-13 Score=100.44 Aligned_cols=105 Identities=27% Similarity=0.283 Sum_probs=89.8
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecChhHHHHHHHHHHhc--CCeEEEEeecCCCHHHHHHHHHHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRNETELNERIQEWKSK--GLKVSGSACDLKIRAERQKLMETVC 85 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~ 85 (122)
..+.||+++||||+|+||.++|+++++.+. ++++.++++-+......++... ..++.++.+||.|.+.+.++++.
T Consensus 246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~-- 323 (588)
T COG1086 246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEG-- 323 (588)
T ss_pred hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhc--
Confidence 347899999999999999999999999874 6899999998888888888764 35789999999999999999965
Q ss_pred HHcCCCCcEEEEcCCCCCcchhhccccccCCCCC
Q 033299 86 SEFDGKLNILVSSSAKVPFELLISEKLKIQPENS 119 (122)
Q Consensus 86 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~n~ 119 (122)
-++|+|+|.|++-+.+..+..+.+....|.
T Consensus 324 ----~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV 353 (588)
T COG1086 324 ----HKVDIVFHAAALKHVPLVEYNPEEAIKTNV 353 (588)
T ss_pred ----CCCceEEEhhhhccCcchhcCHHHHHHHhh
Confidence 379999999999988877777766665554
No 219
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.49 E-value=4e-13 Score=92.84 Aligned_cols=97 Identities=24% Similarity=0.206 Sum_probs=85.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcC--CeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKG--LKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
+.++|||+++|||.+++..+..+|++|.++.|+..++.+....+.... ..+.+..+|+.|++++..+++++.+.. ++
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~-~~ 112 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE-GP 112 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc-CC
Confidence 589999999999999999999999999999999999999888886542 237789999999999999999998877 89
Q ss_pred CcEEEEcCCCCCcchhhccc
Q 033299 92 LNILVSSSAKVPFELLISEK 111 (122)
Q Consensus 92 id~lv~~ag~~~~~~~~~~~ 111 (122)
+|.+|+|||...++...+..
T Consensus 113 ~d~l~~cAG~~v~g~f~~~s 132 (331)
T KOG1210|consen 113 IDNLFCCAGVAVPGLFEDLS 132 (331)
T ss_pred cceEEEecCcccccccccCC
Confidence 99999999998777665443
No 220
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.47 E-value=2.5e-13 Score=96.10 Aligned_cols=89 Identities=20% Similarity=0.202 Sum_probs=68.2
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHH-HHHHHHH----hcCCeEEEEeecCCCHHHHHHHHHHH
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELN-ERIQEWK----SKGLKVSGSACDLKIRAERQKLMETV 84 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~-~~~~~~~----~~~~~~~~~~~Dv~~~~~~~~~~~~~ 84 (122)
.++++.+||||++|+||.++++.|+.+|++|++++|..+... ...+.+. ..+.++.++.+|++|.+.+.++++..
T Consensus 3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 82 (340)
T PLN02653 3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI 82 (340)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence 456889999999999999999999999999999888643211 1112221 11235789999999999998888763
Q ss_pred HHHcCCCCcEEEEcCCCCCc
Q 033299 85 CSEFDGKLNILVSSSAKVPF 104 (122)
Q Consensus 85 ~~~~~g~id~lv~~ag~~~~ 104 (122)
.+|+|||+||....
T Consensus 83 ------~~d~Vih~A~~~~~ 96 (340)
T PLN02653 83 ------KPDEVYNLAAQSHV 96 (340)
T ss_pred ------CCCEEEECCcccch
Confidence 58999999998654
No 221
>PRK07578 short chain dehydrogenase; Provisional
Probab=99.46 E-value=4.9e-13 Score=87.98 Aligned_cols=70 Identities=34% Similarity=0.448 Sum_probs=60.2
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcE
Q 033299 15 TALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNI 94 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~ 94 (122)
+++|||+++|||.++++.|.++ ++|++++|+.. .+.||+++++++++++++ + +++|+
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------------~~~~D~~~~~~~~~~~~~----~-~~id~ 58 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------------DVQVDITDPASIRALFEK----V-GKVDA 58 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------------ceEecCCChHHHHHHHHh----c-CCCCE
Confidence 6899999999999999999998 89999988753 368999999999998865 4 78999
Q ss_pred EEEcCCCCCcchh
Q 033299 95 LVSSSAKVPFELL 107 (122)
Q Consensus 95 lv~~ag~~~~~~~ 107 (122)
+|||||.....+.
T Consensus 59 lv~~ag~~~~~~~ 71 (199)
T PRK07578 59 VVSAAGKVHFAPL 71 (199)
T ss_pred EEECCCCCCCCch
Confidence 9999998755443
No 222
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.45 E-value=1.3e-12 Score=92.88 Aligned_cols=85 Identities=24% Similarity=0.241 Sum_probs=68.8
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCC
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDG 90 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g 90 (122)
..++++||||++|+||.++++.|+++|++|+++.|+.+........+.. +.++.++.+|+++.+.+.+++ .
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~--------~ 78 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-GDRLRLFRADLQEEGSFDEAV--------K 78 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-CCeEEEEECCCCCHHHHHHHH--------c
Confidence 4567899999999999999999999999999999887655554444432 346888999999998877776 3
Q ss_pred CCcEEEEcCCCCCc
Q 033299 91 KLNILVSSSAKVPF 104 (122)
Q Consensus 91 ~id~lv~~ag~~~~ 104 (122)
.+|+|||+|+....
T Consensus 79 ~~d~Vih~A~~~~~ 92 (353)
T PLN02896 79 GCDGVFHVAASMEF 92 (353)
T ss_pred CCCEEEECCccccC
Confidence 58999999998654
No 223
>PLN02240 UDP-glucose 4-epimerase
Probab=99.45 E-value=8.6e-13 Score=93.51 Aligned_cols=89 Identities=24% Similarity=0.271 Sum_probs=67.5
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHH---HHHHH-hcCCeEEEEeecCCCHHHHHHHHHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNER---IQEWK-SKGLKVSGSACDLKIRAERQKLMETV 84 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~---~~~~~-~~~~~~~~~~~Dv~~~~~~~~~~~~~ 84 (122)
|++++|.++|||++|+||.+++++|+++|++|++++|........ ..... ..+.++.++.+|+++++.+.++++.
T Consensus 1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~- 79 (352)
T PLN02240 1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAS- 79 (352)
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHh-
Confidence 356788999999999999999999999999999987653222111 11111 1234578899999999998888764
Q ss_pred HHHcCCCCcEEEEcCCCCC
Q 033299 85 CSEFDGKLNILVSSSAKVP 103 (122)
Q Consensus 85 ~~~~~g~id~lv~~ag~~~ 103 (122)
..+|+|||+||...
T Consensus 80 -----~~~d~vih~a~~~~ 93 (352)
T PLN02240 80 -----TRFDAVIHFAGLKA 93 (352)
T ss_pred -----CCCCEEEEccccCC
Confidence 36899999999764
No 224
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.44 E-value=2e-12 Score=86.37 Aligned_cols=81 Identities=23% Similarity=0.224 Sum_probs=66.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCc
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLN 93 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id 93 (122)
+.++|||++++||.+++++|+++|++|++++|+.+..++. ... .+.++.+|+++.+.++++++++.. +++|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~----~~~--~~~~~~~D~~~~~~v~~~~~~~~~---~~~d 72 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAAL----QAL--GAEALALDVADPASVAGLAWKLDG---EALD 72 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHH----Hhc--cceEEEecCCCHHHHHHHHHHhcC---CCCC
Confidence 5799999999999999999999999999999987655433 222 245789999999999988776521 4799
Q ss_pred EEEEcCCCCC
Q 033299 94 ILVSSSAKVP 103 (122)
Q Consensus 94 ~lv~~ag~~~ 103 (122)
++|||+|...
T Consensus 73 ~vi~~ag~~~ 82 (222)
T PRK06953 73 AAVYVAGVYG 82 (222)
T ss_pred EEEECCCccc
Confidence 9999999873
No 225
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.43 E-value=9.3e-13 Score=93.31 Aligned_cols=85 Identities=21% Similarity=0.224 Sum_probs=65.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHH-HHHHHHHH----h-cCCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETEL-NERIQEWK----S-KGLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~-~~~~~~~~----~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
|++|||||+|+||.+++++|++.|++|++++|+.+.. ......+. . .+.++.++.+|++|.+.+.++++..
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~--- 77 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI--- 77 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence 5899999999999999999999999999998875321 11111111 1 1235789999999999988888652
Q ss_pred cCCCCcEEEEcCCCCCc
Q 033299 88 FDGKLNILVSSSAKVPF 104 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~~ 104 (122)
++|+|||+|+....
T Consensus 78 ---~~d~ViH~Aa~~~~ 91 (343)
T TIGR01472 78 ---KPTEIYNLAAQSHV 91 (343)
T ss_pred ---CCCEEEECCccccc
Confidence 58999999998654
No 226
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=99.41 E-value=2.1e-12 Score=86.84 Aligned_cols=78 Identities=29% Similarity=0.395 Sum_probs=60.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC--CeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFG--AIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
+.++|||+++|||.+++++|++++ ..|+...|+.... . .+.++.+++||+++.++++++. +++ ++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~------~--~~~~~~~~~~Dls~~~~~~~~~----~~~-~~ 67 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD------F--QHDNVQWHALDVTDEAEIKQLS----EQF-TQ 67 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc------c--ccCceEEEEecCCCHHHHHHHH----Hhc-CC
Confidence 478999999999999999999985 5666666654321 1 1246888999999999888754 445 78
Q ss_pred CcEEEEcCCCCCc
Q 033299 92 LNILVSSSAKVPF 104 (122)
Q Consensus 92 id~lv~~ag~~~~ 104 (122)
+|+||||||....
T Consensus 68 id~li~~aG~~~~ 80 (235)
T PRK09009 68 LDWLINCVGMLHT 80 (235)
T ss_pred CCEEEECCccccc
Confidence 9999999999854
No 227
>PLN02214 cinnamoyl-CoA reductase
Probab=99.41 E-value=4.9e-12 Score=89.83 Aligned_cols=87 Identities=21% Similarity=0.162 Sum_probs=67.5
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHH-HHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNE-RIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
..+++++++|||++|+||.++++.|+++|++|+++.|+.+.... ....+.....++.++.+|+++.+.+.+++
T Consensus 6 ~~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~------ 79 (342)
T PLN02214 6 ASPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAI------ 79 (342)
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHH------
Confidence 34677899999999999999999999999999999987654322 12233222235788899999999888777
Q ss_pred cCCCCcEEEEcCCCCC
Q 033299 88 FDGKLNILVSSSAKVP 103 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~ 103 (122)
..+|+|||+|+...
T Consensus 80 --~~~d~Vih~A~~~~ 93 (342)
T PLN02214 80 --DGCDGVFHTASPVT 93 (342)
T ss_pred --hcCCEEEEecCCCC
Confidence 35899999999753
No 228
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.41 E-value=3e-12 Score=89.92 Aligned_cols=85 Identities=18% Similarity=0.089 Sum_probs=66.6
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHh--cCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKS--KGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
..+++++|||++|+||.+++++|+++|++|+++.|+....+........ ...++.++.+|+++++.+.+++
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~------- 75 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAI------- 75 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHH-------
Confidence 4578999999999999999999999999999888876544333222211 1236788999999999888777
Q ss_pred CCCCcEEEEcCCCCC
Q 033299 89 DGKLNILVSSSAKVP 103 (122)
Q Consensus 89 ~g~id~lv~~ag~~~ 103 (122)
..+|+|||+||...
T Consensus 76 -~~~d~vih~A~~~~ 89 (322)
T PLN02986 76 -EGCDAVFHTASPVF 89 (322)
T ss_pred -hCCCEEEEeCCCcC
Confidence 35899999999753
No 229
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.40 E-value=1.7e-12 Score=89.42 Aligned_cols=95 Identities=24% Similarity=0.222 Sum_probs=78.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCc
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLN 93 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id 93 (122)
+.+||||++|.||++++..|++.|+.|++++.-.....+.+... ...+++.|+.|.+.+.++|++ .+||
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-----~~~f~~gDi~D~~~L~~vf~~------~~id 69 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-----QFKFYEGDLLDRALLTAVFEE------NKID 69 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-----cCceEEeccccHHHHHHHHHh------cCCC
Confidence 36899999999999999999999999999987544333333221 157999999999998888876 4899
Q ss_pred EEEEcCCCCCcchhhccccccCCCCC
Q 033299 94 ILVSSSAKVPFELLISEKLKIQPENS 119 (122)
Q Consensus 94 ~lv~~ag~~~~~~~~~~~~~~~~~n~ 119 (122)
.|||.||..........|.+....|+
T Consensus 70 aViHFAa~~~VgESv~~Pl~Yy~NNv 95 (329)
T COG1087 70 AVVHFAASISVGESVQNPLKYYDNNV 95 (329)
T ss_pred EEEECccccccchhhhCHHHHHhhch
Confidence 99999999998888888888877765
No 230
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.40 E-value=1.9e-13 Score=94.53 Aligned_cols=96 Identities=24% Similarity=0.327 Sum_probs=67.9
Q ss_pred EEEecCCCchHHHHHHHHHHCC-CeEEEeecChhHHHHHHHHHHhc--CCeE----EEEeecCCCHHHHHHHHHHHHHHc
Q 033299 16 ALVTGGTRGIGHAIVEELTAFG-AIVHTCSRNETELNERIQEWKSK--GLKV----SGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 16 ~litG~~~~ig~~~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~--~~~~----~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
+|||||+|+||++++++|++.+ ..++++++++..+-....++... +.++ ..+.+|+.|.+.+.+++++
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~----- 75 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEE----- 75 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhh-----
Confidence 6899999999999999999988 57999999999988888888533 1223 3568899999999999865
Q ss_pred CCCCcEEEEcCCCCCcchhhccccccCCC
Q 033299 89 DGKLNILVSSSAKVPFELLISEKLKIQPE 117 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~ 117 (122)
.++|+|+|.|++-+.+..+..+.+....
T Consensus 76 -~~pdiVfHaAA~KhVpl~E~~p~eav~t 103 (293)
T PF02719_consen 76 -YKPDIVFHAAALKHVPLMEDNPFEAVKT 103 (293)
T ss_dssp --T-SEEEE------HHHHCCCHHHHHHH
T ss_pred -cCCCEEEEChhcCCCChHHhCHHHHHHH
Confidence 3789999999998877766655544433
No 231
>PRK08309 short chain dehydrogenase; Provisional
Probab=99.40 E-value=1.5e-11 Score=80.10 Aligned_cols=87 Identities=20% Similarity=0.178 Sum_probs=71.8
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcE
Q 033299 15 TALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNI 94 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~ 94 (122)
.++|||++ |+|.++++.|+++|++|++++|+.+....+...+.. ..++.++.+|++|++++.++++...+.+ +++|+
T Consensus 2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~-g~id~ 78 (177)
T PRK08309 2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKN-GPFDL 78 (177)
T ss_pred EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCeE
Confidence 58999998 666779999999999999999998776665554532 3468889999999999999999999988 89999
Q ss_pred EEEcCCCCCc
Q 033299 95 LVSSSAKVPF 104 (122)
Q Consensus 95 lv~~ag~~~~ 104 (122)
+|+..=....
T Consensus 79 lv~~vh~~~~ 88 (177)
T PRK08309 79 AVAWIHSSAK 88 (177)
T ss_pred EEEeccccch
Confidence 9987655543
No 232
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.35 E-value=6.2e-12 Score=89.43 Aligned_cols=88 Identities=17% Similarity=0.136 Sum_probs=66.3
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHH----hc-CCeEEEEeecCCCHHHHHHHHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWK----SK-GLKVSGSACDLKIRAERQKLMET 83 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~~-~~~~~~~~~Dv~~~~~~~~~~~~ 83 (122)
..++++.++||||+|.||.+++++|+++|++|++++|............. .. ..++.++.+|++|.+.+..++
T Consensus 11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~-- 88 (348)
T PRK15181 11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKAC-- 88 (348)
T ss_pred ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh--
Confidence 45677899999999999999999999999999999885433222222221 11 135788999999988877776
Q ss_pred HHHHcCCCCcEEEEcCCCCCc
Q 033299 84 VCSEFDGKLNILVSSSAKVPF 104 (122)
Q Consensus 84 ~~~~~~g~id~lv~~ag~~~~ 104 (122)
..+|+|||.|+....
T Consensus 89 ------~~~d~ViHlAa~~~~ 103 (348)
T PRK15181 89 ------KNVDYVLHQAALGSV 103 (348)
T ss_pred ------hCCCEEEECccccCc
Confidence 347999999997643
No 233
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.35 E-value=9.9e-12 Score=87.09 Aligned_cols=83 Identities=13% Similarity=0.096 Sum_probs=64.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHh---cCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKS---KGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
+++.++|||++|+||.+++++|+++|++|+++.|+........ .+.. ...++.++.+|+++++.+..++
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~------- 74 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTE-HLLALDGAKERLHLFKANLLEEGSFDSVV------- 74 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHH-HHHhccCCCCceEEEeccccCcchHHHHH-------
Confidence 4689999999999999999999999999998888765432221 1211 1236788999999998877776
Q ss_pred CCCCcEEEEcCCCCC
Q 033299 89 DGKLNILVSSSAKVP 103 (122)
Q Consensus 89 ~g~id~lv~~ag~~~ 103 (122)
..+|+|||+|+...
T Consensus 75 -~~~d~Vih~A~~~~ 88 (322)
T PLN02662 75 -DGCEGVFHTASPFY 88 (322)
T ss_pred -cCCCEEEEeCCccc
Confidence 35899999999753
No 234
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.34 E-value=2.3e-11 Score=89.16 Aligned_cols=89 Identities=20% Similarity=0.187 Sum_probs=65.4
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChh---H----H---------HHHHHHHHh-cCCeEEEEeecC
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNET---E----L---------NERIQEWKS-KGLKVSGSACDL 71 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~---~----~---------~~~~~~~~~-~~~~~~~~~~Dv 71 (122)
-.++++.+|||||+|+||.+++++|+++|++|+++++... . . .+....+.. .+.++.++.+|+
T Consensus 43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 122 (442)
T PLN02572 43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDI 122 (442)
T ss_pred ccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCC
Confidence 4567889999999999999999999999999998764211 0 0 011111111 123588999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcEEEEcCCCCC
Q 033299 72 KIRAERQKLMETVCSEFDGKLNILVSSSAKVP 103 (122)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~ 103 (122)
+|.+.+.++++. .++|+|||+|+...
T Consensus 123 ~d~~~v~~~l~~------~~~D~ViHlAa~~~ 148 (442)
T PLN02572 123 CDFEFLSEAFKS------FEPDAVVHFGEQRS 148 (442)
T ss_pred CCHHHHHHHHHh------CCCCEEEECCCccc
Confidence 999998888865 26899999997644
No 235
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.33 E-value=2.2e-11 Score=86.17 Aligned_cols=82 Identities=17% Similarity=0.145 Sum_probs=63.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHH--HHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERI--QEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
++++++|||++|+||.++++.|+++|++|+++.|+.+...... ..+... .++.++.+|++|++.+.+++
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~-------- 78 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQEL-GDLKIFGADLTDEESFEAPI-------- 78 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCC-CceEEEEcCCCChHHHHHHH--------
Confidence 4688999999999999999999999999988887754332221 112111 25788999999998877766
Q ss_pred CCCcEEEEcCCCC
Q 033299 90 GKLNILVSSSAKV 102 (122)
Q Consensus 90 g~id~lv~~ag~~ 102 (122)
.++|+|||+|+..
T Consensus 79 ~~~d~vih~A~~~ 91 (338)
T PLN00198 79 AGCDLVFHVATPV 91 (338)
T ss_pred hcCCEEEEeCCCC
Confidence 3589999999964
No 236
>PLN02650 dihydroflavonol-4-reductase
Probab=99.32 E-value=2.7e-11 Score=86.08 Aligned_cols=84 Identities=15% Similarity=0.129 Sum_probs=65.3
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHh--cCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKS--KGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
.+|.+|||||+|+||.+++++|+++|++|+++.|+.+........... ...++.++.+|+++.+.+.+++
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-------- 75 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAI-------- 75 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHH--------
Confidence 457899999999999999999999999999988876554443222211 1135788999999998887776
Q ss_pred CCCcEEEEcCCCCC
Q 033299 90 GKLNILVSSSAKVP 103 (122)
Q Consensus 90 g~id~lv~~ag~~~ 103 (122)
..+|+|||+|+...
T Consensus 76 ~~~d~ViH~A~~~~ 89 (351)
T PLN02650 76 RGCTGVFHVATPMD 89 (351)
T ss_pred hCCCEEEEeCCCCC
Confidence 34799999998754
No 237
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=99.31 E-value=2.7e-11 Score=84.21 Aligned_cols=100 Identities=24% Similarity=0.221 Sum_probs=79.8
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHH---HHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 13 GMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELN---ERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 13 ~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
++.+|||||+|.||.+.+.+|.+.|+.|++++.-..... ...+++...+..+.++..|++|.+.++++|+..
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~----- 76 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV----- 76 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence 578999999999999999999999999999875332222 223333333467999999999999999988773
Q ss_pred CCCcEEEEcCCCCCcchhhccccccCCCC
Q 033299 90 GKLNILVSSSAKVPFELLISEKLKIQPEN 118 (122)
Q Consensus 90 g~id~lv~~ag~~~~~~~~~~~~~~~~~n 118 (122)
.+|.|+|.|+....+.....+...+..|
T Consensus 77 -~fd~V~Hfa~~~~vgeS~~~p~~Y~~nN 104 (343)
T KOG1371|consen 77 -KFDAVMHFAALAAVGESMENPLSYYHNN 104 (343)
T ss_pred -CCceEEeehhhhccchhhhCchhheehh
Confidence 6999999999998888888887666555
No 238
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.31 E-value=2.9e-11 Score=87.35 Aligned_cols=88 Identities=23% Similarity=0.210 Sum_probs=67.2
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHH--HHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNE--RIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
.+++.++|||++|+||.++++.|+++|++|+++.|+...... ...+......++.++.+|++|++++.++++..
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~---- 133 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE---- 133 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh----
Confidence 346789999999999999999999999999999998654321 11111112235788999999999999888653
Q ss_pred CCCCcEEEEcCCCC
Q 033299 89 DGKLNILVSSSAKV 102 (122)
Q Consensus 89 ~g~id~lv~~ag~~ 102 (122)
+.++|+|||++|..
T Consensus 134 ~~~~D~Vi~~aa~~ 147 (390)
T PLN02657 134 GDPVDVVVSCLASR 147 (390)
T ss_pred CCCCcEEEECCccC
Confidence 12799999998853
No 239
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.30 E-value=1.6e-11 Score=86.59 Aligned_cols=84 Identities=15% Similarity=0.123 Sum_probs=63.1
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhc-CCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCc
Q 033299 15 TALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSK-GLKVSGSACDLKIRAERQKLMETVCSEFDGKLN 93 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id 93 (122)
.++|||++|+||.++++.|+++|++|++++|...........+... +.++.++.+|++|.+.+..++.. .++|
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------~~~d 75 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD------HAID 75 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc------CCCC
Confidence 5899999999999999999999999998876433222222222221 23567789999999988888753 3699
Q ss_pred EEEEcCCCCCc
Q 033299 94 ILVSSSAKVPF 104 (122)
Q Consensus 94 ~lv~~ag~~~~ 104 (122)
+|||+||....
T Consensus 76 ~vvh~a~~~~~ 86 (338)
T PRK10675 76 TVIHFAGLKAV 86 (338)
T ss_pred EEEECCccccc
Confidence 99999997643
No 240
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.30 E-value=1.4e-11 Score=87.49 Aligned_cols=83 Identities=16% Similarity=0.143 Sum_probs=60.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEE-EeecChhHHHHHHHHHHh--cCCeEEEEeecCCCHHHHHHHHHHHHHHcCC
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFGAIVH-TCSRNETELNERIQEWKS--KGLKVSGSACDLKIRAERQKLMETVCSEFDG 90 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g~~v~-~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g 90 (122)
+.+||||++|+||.++++.|+++|+.++ ++++.... ... ..+.. .+.++.++.+|++|.++++++++. .
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------~ 73 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNL-MSLAPVAQSERFAFEKVDICDRAELARVFTE------H 73 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cch-hhhhhcccCCceEEEECCCcChHHHHHHHhh------c
Confidence 5799999999999999999999998744 45543221 111 11111 123577889999999998888765 3
Q ss_pred CCcEEEEcCCCCCc
Q 033299 91 KLNILVSSSAKVPF 104 (122)
Q Consensus 91 ~id~lv~~ag~~~~ 104 (122)
++|+|||+||....
T Consensus 74 ~~D~Vih~A~~~~~ 87 (355)
T PRK10217 74 QPDCVMHLAAESHV 87 (355)
T ss_pred CCCEEEECCcccCc
Confidence 68999999998653
No 241
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.29 E-value=3e-11 Score=84.39 Aligned_cols=83 Identities=23% Similarity=0.249 Sum_probs=62.5
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcE
Q 033299 15 TALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNI 94 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~ 94 (122)
.++|||++|+||.+++++|.++|++|+++++............... .++..+.+|+++.+++.+++.. +++|+
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~------~~~d~ 73 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERI-TRVTFVEGDLRDRELLDRLFEE------HKIDA 73 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccc-cceEEEECCCCCHHHHHHHHHh------CCCcE
Confidence 3789999999999999999999999988766433222222222211 1477889999999998888764 47999
Q ss_pred EEEcCCCCCc
Q 033299 95 LVSSSAKVPF 104 (122)
Q Consensus 95 lv~~ag~~~~ 104 (122)
+||+||....
T Consensus 74 vv~~ag~~~~ 83 (328)
T TIGR01179 74 VIHFAGLIAV 83 (328)
T ss_pred EEECccccCc
Confidence 9999998643
No 242
>PLN02583 cinnamoyl-CoA reductase
Probab=99.29 E-value=7.1e-11 Score=82.37 Aligned_cols=84 Identities=13% Similarity=0.077 Sum_probs=62.7
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChh--HHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNET--ELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
-.+++++|||++|+||.+++++|+++|++|+++.|+.+ ........+...+.++.++.+|++|.+.+.+++
T Consensus 4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l------- 76 (297)
T PLN02583 4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDAL------- 76 (297)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHH-------
Confidence 35689999999999999999999999999999988632 222223333222346788899999999887665
Q ss_pred CCCCcEEEEcCCCC
Q 033299 89 DGKLNILVSSSAKV 102 (122)
Q Consensus 89 ~g~id~lv~~ag~~ 102 (122)
...|.++|.++..
T Consensus 77 -~~~d~v~~~~~~~ 89 (297)
T PLN02583 77 -KGCSGLFCCFDPP 89 (297)
T ss_pred -cCCCEEEEeCccC
Confidence 3578888866543
No 243
>PLN02427 UDP-apiose/xylose synthase
Probab=99.28 E-value=1.6e-11 Score=88.39 Aligned_cols=86 Identities=13% Similarity=0.099 Sum_probs=64.3
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHC-CCeEEEeecChhHHHHHHHHHH-hcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAF-GAIVHTCSRNETELNERIQEWK-SKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
++.++++||||+|+||.++++.|+++ |++|++++|+.+.......... ....++.++.+|++|.+.+.+++
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~------- 84 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLI------- 84 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHh-------
Confidence 34568999999999999999999998 5899999887654332221100 01235889999999998887776
Q ss_pred CCCCcEEEEcCCCCCc
Q 033299 89 DGKLNILVSSSAKVPF 104 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~ 104 (122)
..+|+|||.|+....
T Consensus 85 -~~~d~ViHlAa~~~~ 99 (386)
T PLN02427 85 -KMADLTINLAAICTP 99 (386)
T ss_pred -hcCCEEEEcccccCh
Confidence 247999999997643
No 244
>PLN02686 cinnamoyl-CoA reductase
Probab=99.25 E-value=1.3e-10 Score=83.28 Aligned_cols=85 Identities=19% Similarity=0.159 Sum_probs=65.4
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhc------CCeEEEEeecCCCHHHHHHHHHH
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSK------GLKVSGSACDLKIRAERQKLMET 83 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~~~~~~~~ 83 (122)
..++|.+||||++|+||.++++.|+++|++|+++.|+.+....+ ..+... ...+.++.+|++|.+.+.++++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~- 127 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD- 127 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHH-
Confidence 45688999999999999999999999999999888876554433 232211 1247788999999998888774
Q ss_pred HHHHcCCCCcEEEEcCCCCC
Q 033299 84 VCSEFDGKLNILVSSSAKVP 103 (122)
Q Consensus 84 ~~~~~~g~id~lv~~ag~~~ 103 (122)
.+|.+||.|+...
T Consensus 128 -------~~d~V~hlA~~~~ 140 (367)
T PLN02686 128 -------GCAGVFHTSAFVD 140 (367)
T ss_pred -------hccEEEecCeeec
Confidence 3688888887653
No 245
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.24 E-value=9.8e-11 Score=83.14 Aligned_cols=82 Identities=20% Similarity=0.202 Sum_probs=59.6
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCe-EEEeecCh--hHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 15 TALVTGGTRGIGHAIVEELTAFGAI-VHTCSRNE--TELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~~g~~-v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
.++|||++|+||.+++++|+++|+. |+.+++.. ...... ..+. .+.++.++.+|++|.+++.+++++ ..
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~------~~ 73 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESL-ADVS-DSERYVFEHADICDRAELDRIFAQ------HQ 73 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHH-Hhcc-cCCceEEEEecCCCHHHHHHHHHh------cC
Confidence 5899999999999999999999975 55555432 111111 1111 123577889999999999888865 36
Q ss_pred CcEEEEcCCCCCc
Q 033299 92 LNILVSSSAKVPF 104 (122)
Q Consensus 92 id~lv~~ag~~~~ 104 (122)
+|+|||+||....
T Consensus 74 ~d~vih~A~~~~~ 86 (352)
T PRK10084 74 PDAVMHLAAESHV 86 (352)
T ss_pred CCEEEECCcccCC
Confidence 9999999998643
No 246
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.19 E-value=1.1e-10 Score=81.20 Aligned_cols=83 Identities=19% Similarity=0.128 Sum_probs=60.6
Q ss_pred EEEEecCCCchHHHHHHHHHHCC--CeEEEeecChh-HHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 15 TALVTGGTRGIGHAIVEELTAFG--AIVHTCSRNET-ELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~~g--~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
.++|||++|+||.+++++|++.| ++|++++|... ...+..+.+.. ..++.++.+|++|++++.++++. -+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~------~~ 73 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED-NPRYRFVKGDIGDRELVSRLFTE------HQ 73 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc-CCCcEEEEcCCcCHHHHHHHHhh------cC
Confidence 37999999999999999999987 67888776321 11111222221 23577889999999998888754 25
Q ss_pred CcEEEEcCCCCCc
Q 033299 92 LNILVSSSAKVPF 104 (122)
Q Consensus 92 id~lv~~ag~~~~ 104 (122)
+|+|||+|+....
T Consensus 74 ~d~vi~~a~~~~~ 86 (317)
T TIGR01181 74 PDAVVHFAAESHV 86 (317)
T ss_pred CCEEEEcccccCc
Confidence 8999999998653
No 247
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=99.19 E-value=4.9e-11 Score=80.44 Aligned_cols=79 Identities=18% Similarity=0.209 Sum_probs=61.2
Q ss_pred EEecC-CCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcEE
Q 033299 17 LVTGG-TRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNIL 95 (122)
Q Consensus 17 litG~-~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~l 95 (122)
.||.. +||||.++++.|+++|++|+++++... +... ....+|+++.+++.++++.+.+.+ +++|++
T Consensus 18 ~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~~----~~~~~Dv~d~~s~~~l~~~v~~~~-g~iDiL 84 (227)
T TIGR02114 18 SITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKPE----PHPNLSIREIETTKDLLITLKELV-QEHDIL 84 (227)
T ss_pred eecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------cccc----cCCcceeecHHHHHHHHHHHHHHc-CCCCEE
Confidence 34544 678999999999999999998876311 1100 023589999999999999999999 899999
Q ss_pred EEcCCCCCcchhh
Q 033299 96 VSSSAKVPFELLI 108 (122)
Q Consensus 96 v~~ag~~~~~~~~ 108 (122)
|||||+....+..
T Consensus 85 VnnAgv~d~~~~~ 97 (227)
T TIGR02114 85 IHSMAVSDYTPVY 97 (227)
T ss_pred EECCEeccccchh
Confidence 9999987655543
No 248
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.17 E-value=5.9e-10 Score=72.29 Aligned_cols=73 Identities=19% Similarity=0.186 Sum_probs=63.5
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcEE
Q 033299 16 ALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNIL 95 (122)
Q Consensus 16 ~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~l 95 (122)
++|+||+|.+|..+++.|++.|++|.++.|++++.++ ..++.++.+|+.|++++.+.+ ...|.+
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--------~~~~~~~~~d~~d~~~~~~al--------~~~d~v 64 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--------SPGVEIIQGDLFDPDSVKAAL--------KGADAV 64 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--------CTTEEEEESCTTCHHHHHHHH--------TTSSEE
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--------ccccccceeeehhhhhhhhhh--------hhcchh
Confidence 6899999999999999999999999999999887665 347999999999998888877 468999
Q ss_pred EEcCCCCCc
Q 033299 96 VSSSAKVPF 104 (122)
Q Consensus 96 v~~ag~~~~ 104 (122)
|+++|....
T Consensus 65 i~~~~~~~~ 73 (183)
T PF13460_consen 65 IHAAGPPPK 73 (183)
T ss_dssp EECCHSTTT
T ss_pred hhhhhhhcc
Confidence 999975443
No 249
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.17 E-value=5.1e-10 Score=76.23 Aligned_cols=82 Identities=20% Similarity=0.247 Sum_probs=61.2
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCH-HHHHHHHHHHHHHc
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIR-AERQKLMETVCSEF 88 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~~~~~~~~~~~~~ 88 (122)
...++.++|||++|+||..+++.|+..|++|+++.|+.+....... .+.++.++.+|+++. +.+ .+. +
T Consensus 14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~l---~~~----~ 82 (251)
T PLN00141 14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----QDPSLQIVRADVTEGSDKL---VEA----I 82 (251)
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----cCCceEEEEeeCCCCHHHH---HHH----h
Confidence 3457899999999999999999999999999999998765433221 123588899999984 322 222 2
Q ss_pred CCCCcEEEEcCCCC
Q 033299 89 DGKLNILVSSSAKV 102 (122)
Q Consensus 89 ~g~id~lv~~ag~~ 102 (122)
+..+|+||+++|..
T Consensus 83 ~~~~d~vi~~~g~~ 96 (251)
T PLN00141 83 GDDSDAVICATGFR 96 (251)
T ss_pred hcCCCEEEECCCCC
Confidence 12589999999875
No 250
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.12 E-value=7.6e-10 Score=74.09 Aligned_cols=77 Identities=26% Similarity=0.291 Sum_probs=63.2
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcEE
Q 033299 16 ALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNIL 95 (122)
Q Consensus 16 ~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~l 95 (122)
++||||+|.||.+++++|+++|+.|+...|+........... ++.++.+|+.+.+.++.+++.. .+|.|
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~dl~~~~~~~~~~~~~------~~d~v 69 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-----NVEFVIGDLTDKEQLEKLLEKA------NIDVV 69 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-----TEEEEESETTSHHHHHHHHHHH------TESEE
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-----eEEEEEeecccccccccccccc------CceEE
Confidence 689999999999999999999999887777655432222211 6889999999999999999874 68999
Q ss_pred EEcCCCCC
Q 033299 96 VSSSAKVP 103 (122)
Q Consensus 96 v~~ag~~~ 103 (122)
||.|+...
T Consensus 70 i~~a~~~~ 77 (236)
T PF01370_consen 70 IHLAAFSS 77 (236)
T ss_dssp EEEBSSSS
T ss_pred EEeecccc
Confidence 99999874
No 251
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.11 E-value=9.7e-10 Score=77.30 Aligned_cols=74 Identities=20% Similarity=0.174 Sum_probs=59.8
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcE
Q 033299 15 TALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNI 94 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~ 94 (122)
+++||||+|.||.++++.|+++|++|.++.|+.+..... .. ..+.++.+|++|++++..++ ..+|+
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l----~~--~~v~~v~~Dl~d~~~l~~al--------~g~d~ 67 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL----KE--WGAELVYGDLSLPETLPPSF--------KGVTA 67 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhH----hh--cCCEEEECCCCCHHHHHHHH--------CCCCE
Confidence 689999999999999999999999999999986543221 11 24778899999999887776 35799
Q ss_pred EEEcCCCC
Q 033299 95 LVSSSAKV 102 (122)
Q Consensus 95 lv~~ag~~ 102 (122)
|||.++..
T Consensus 68 Vi~~~~~~ 75 (317)
T CHL00194 68 IIDASTSR 75 (317)
T ss_pred EEECCCCC
Confidence 99987643
No 252
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.10 E-value=5e-10 Score=85.75 Aligned_cols=82 Identities=15% Similarity=0.110 Sum_probs=61.3
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHC-CCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHH-HHHHHHHHHHH
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAF-GAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAE-RQKLMETVCSE 87 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~~~~~~ 87 (122)
..+++.++||||+|+||.++++.|+++ |++|++++|....... +.. ..++.++.+|++|... +.+++
T Consensus 312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~----~~~-~~~~~~~~gDl~d~~~~l~~~l------ 380 (660)
T PRK08125 312 AKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR----FLG-HPRFHFVEGDISIHSEWIEYHI------ 380 (660)
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh----hcC-CCceEEEeccccCcHHHHHHHh------
Confidence 345678999999999999999999986 7999999987643222 111 1357788999998654 33333
Q ss_pred cCCCCcEEEEcCCCCCc
Q 033299 88 FDGKLNILVSSSAKVPF 104 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~~ 104 (122)
..+|+|||.|+....
T Consensus 381 --~~~D~ViHlAa~~~~ 395 (660)
T PRK08125 381 --KKCDVVLPLVAIATP 395 (660)
T ss_pred --cCCCEEEECccccCc
Confidence 358999999998654
No 253
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=99.09 E-value=2.3e-09 Score=74.81 Aligned_cols=86 Identities=17% Similarity=0.152 Sum_probs=66.4
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEeecCh---hHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAI-VHTCSRNE---TELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETV 84 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~-v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~ 84 (122)
..+++|.++|+|+ ||+|++++..|...|++ |.++.|+. ++.+++.+++......+.+..+|+++.+.+.+.+
T Consensus 122 ~~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~--- 197 (289)
T PRK12548 122 VDVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEI--- 197 (289)
T ss_pred CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhh---
Confidence 3467899999999 79999999999999985 99999986 6677777766554444556678888777665544
Q ss_pred HHHcCCCCcEEEEcCCCCC
Q 033299 85 CSEFDGKLNILVSSSAKVP 103 (122)
Q Consensus 85 ~~~~~g~id~lv~~ag~~~ 103 (122)
...|+|||+..+.-
T Consensus 198 -----~~~DilINaTp~Gm 211 (289)
T PRK12548 198 -----ASSDILVNATLVGM 211 (289)
T ss_pred -----ccCCEEEEeCCCCC
Confidence 35699999887653
No 254
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.08 E-value=7.8e-10 Score=78.55 Aligned_cols=78 Identities=13% Similarity=0.063 Sum_probs=58.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHC-CCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCC-CHHHHHHHHHHHHHHcCCC
Q 033299 14 MTALVTGGTRGIGHAIVEELTAF-GAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLK-IRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~~~~~~~~~~~~~~g~ 91 (122)
+.++|||++|.||.++++.|++. |++|++++|+...... +.. ...+.++.+|+. +.+.+..++ ..
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~----~~~-~~~~~~~~~Dl~~~~~~~~~~~--------~~ 68 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGD----LVN-HPRMHFFEGDITINKEWIEYHV--------KK 68 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----hcc-CCCeEEEeCCCCCCHHHHHHHH--------cC
Confidence 46999999999999999999986 6999999886543221 111 135888899998 666554444 35
Q ss_pred CcEEEEcCCCCCc
Q 033299 92 LNILVSSSAKVPF 104 (122)
Q Consensus 92 id~lv~~ag~~~~ 104 (122)
+|+|||.|+...+
T Consensus 69 ~d~ViH~aa~~~~ 81 (347)
T PRK11908 69 CDVILPLVAIATP 81 (347)
T ss_pred CCEEEECcccCCh
Confidence 8999999997654
No 255
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.07 E-value=8.3e-10 Score=84.58 Aligned_cols=86 Identities=12% Similarity=0.072 Sum_probs=63.1
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHC--CCeEEEeecCh--hHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHH
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAF--GAIVHTCSRNE--TELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCS 86 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~--g~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 86 (122)
.+.+++|||||+|+||.++++.|++. +++|+++++.. +....... . ....++.++.+|++|.+.+.+++..
T Consensus 4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~-~-~~~~~v~~~~~Dl~d~~~~~~~~~~--- 78 (668)
T PLN02260 4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNP-S-KSSPNFKFVKGDIASADLVNYLLIT--- 78 (668)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhh-c-ccCCCeEEEECCCCChHHHHHHHhh---
Confidence 45689999999999999999999987 57888888742 12211111 0 1123688899999998877766533
Q ss_pred HcCCCCcEEEEcCCCCCc
Q 033299 87 EFDGKLNILVSSSAKVPF 104 (122)
Q Consensus 87 ~~~g~id~lv~~ag~~~~ 104 (122)
..+|+|||+|+....
T Consensus 79 ---~~~D~ViHlAa~~~~ 93 (668)
T PLN02260 79 ---EGIDTIMHFAAQTHV 93 (668)
T ss_pred ---cCCCEEEECCCccCc
Confidence 368999999998754
No 256
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=99.07 E-value=1.8e-09 Score=78.26 Aligned_cols=82 Identities=20% Similarity=0.226 Sum_probs=63.5
Q ss_pred ccCCCEEEEecC----------------CCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCC
Q 033299 10 SLKGMTALVTGG----------------TRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKI 73 (122)
Q Consensus 10 ~~~~~~~litG~----------------~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 73 (122)
.++||.++|||| +|.+|.++++.|..+|++|++++++.+ .. . .. ....+|+++
T Consensus 185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-----~-~~----~~~~~dv~~ 253 (399)
T PRK05579 185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-----T-PA----GVKRIDVES 253 (399)
T ss_pred ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-----C-CC----CcEEEccCC
Confidence 468999999999 555999999999999999999988652 11 0 01 134679999
Q ss_pred HHHHHHHHHHHHHHcCCCCcEEEEcCCCCCcch
Q 033299 74 RAERQKLMETVCSEFDGKLNILVSSSAKVPFEL 106 (122)
Q Consensus 74 ~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~ 106 (122)
.+++.+.+. +.+ +++|++|||||+....+
T Consensus 254 ~~~~~~~v~---~~~-~~~DilI~~Aav~d~~~ 282 (399)
T PRK05579 254 AQEMLDAVL---AAL-PQADIFIMAAAVADYRP 282 (399)
T ss_pred HHHHHHHHH---Hhc-CCCCEEEEccccccccc
Confidence 888766665 456 78999999999986654
No 257
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.07 E-value=7.9e-10 Score=77.41 Aligned_cols=74 Identities=28% Similarity=0.294 Sum_probs=60.1
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcE
Q 033299 15 TALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNI 94 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~ 94 (122)
.++|||++|+||.++++.|.+.|++|++++|+.+.... +. ...+.++.+|+++.+.+.+++ ..+|+
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~--~~~~~~~~~D~~~~~~l~~~~--------~~~d~ 67 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN----LE--GLDVEIVEGDLRDPASLRKAV--------AGCRA 67 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc----cc--cCCceEEEeeCCCHHHHHHHH--------hCCCE
Confidence 68999999999999999999999999999997654321 11 124778999999998877776 35799
Q ss_pred EEEcCCCC
Q 033299 95 LVSSSAKV 102 (122)
Q Consensus 95 lv~~ag~~ 102 (122)
|||+|+..
T Consensus 68 vi~~a~~~ 75 (328)
T TIGR03466 68 LFHVAADY 75 (328)
T ss_pred EEEeceec
Confidence 99999864
No 258
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=99.02 E-value=6.7e-10 Score=77.59 Aligned_cols=67 Identities=15% Similarity=0.236 Sum_probs=54.7
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcE
Q 033299 15 TALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNI 94 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~ 94 (122)
.+||||++|.||.++++.|.+.| .|+.++|... .+..|++|.+.+.++++. -++|+
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------------~~~~Dl~d~~~~~~~~~~------~~~D~ 57 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------------DYCGDFSNPEGVAETVRK------IRPDV 57 (299)
T ss_pred eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------------cccCCCCCHHHHHHHHHh------cCCCE
Confidence 69999999999999999999999 7887776521 235799999988887764 25899
Q ss_pred EEEcCCCCCcc
Q 033299 95 LVSSSAKVPFE 105 (122)
Q Consensus 95 lv~~ag~~~~~ 105 (122)
|||+|+.....
T Consensus 58 Vih~Aa~~~~~ 68 (299)
T PRK09987 58 IVNAAAHTAVD 68 (299)
T ss_pred EEECCccCCcc
Confidence 99999987644
No 259
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.00 E-value=1.8e-09 Score=74.55 Aligned_cols=95 Identities=20% Similarity=0.156 Sum_probs=69.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--eEEEeec-----ChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHH
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFGA--IVHTCSR-----NETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCS 86 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g~--~v~~~~r-----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 86 (122)
+.+|||||+|+||..+++.++.+.. +|+.++. +.+.+ ..+. ...+..|++.|++|.+.+.+++.+
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l----~~~~-~~~~~~fv~~DI~D~~~v~~~~~~--- 72 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENL----ADVE-DSPRYRFVQGDICDRELVDRLFKE--- 72 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHH----Hhhh-cCCCceEEeccccCHHHHHHHHHh---
Confidence 4689999999999999999998763 4666653 22222 2221 235799999999999999888876
Q ss_pred HcCCCCcEEEEcCCCCCcchhhccccccCCCCC
Q 033299 87 EFDGKLNILVSSSAKVPFELLISEKLKIQPENS 119 (122)
Q Consensus 87 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~n~ 119 (122)
-++|+++|.|+=.+.......+..-...|.
T Consensus 73 ---~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv 102 (340)
T COG1088 73 ---YQPDAVVHFAAESHVDRSIDGPAPFIQTNV 102 (340)
T ss_pred ---cCCCeEEEechhccccccccChhhhhhcch
Confidence 379999999998876666666555444443
No 260
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.00 E-value=1.6e-09 Score=75.29 Aligned_cols=78 Identities=21% Similarity=0.224 Sum_probs=59.5
Q ss_pred EEecCCCchHHHHHHHHHHCC--CeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcE
Q 033299 17 LVTGGTRGIGHAIVEELTAFG--AIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNI 94 (122)
Q Consensus 17 litG~~~~ig~~~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~ 94 (122)
|||||+|.+|.+++++|+++| +.|.++++...... ...+... ....++.+|++|++++.+++ ...|+
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~~~-~~~~~~~~Di~d~~~l~~a~--------~g~d~ 69 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF--LKDLQKS-GVKEYIQGDITDPESLEEAL--------EGVDV 69 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc--chhhhcc-cceeEEEeccccHHHHHHHh--------cCCce
Confidence 689999999999999999999 68888887654321 1111111 12338999999999999988 35799
Q ss_pred EEEcCCCCCcc
Q 033299 95 LVSSSAKVPFE 105 (122)
Q Consensus 95 lv~~ag~~~~~ 105 (122)
|||.|+.....
T Consensus 70 V~H~Aa~~~~~ 80 (280)
T PF01073_consen 70 VFHTAAPVPPW 80 (280)
T ss_pred EEEeCcccccc
Confidence 99999987554
No 261
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=98.98 E-value=4.6e-09 Score=75.49 Aligned_cols=81 Identities=16% Similarity=0.201 Sum_probs=60.7
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
|-.+++.++|||++|.||.++++.|.++|++|++++|..... . ........++.+|+++.+.+..++
T Consensus 17 ~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~---~---~~~~~~~~~~~~Dl~d~~~~~~~~------- 83 (370)
T PLN02695 17 WPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH---M---SEDMFCHEFHLVDLRVMENCLKVT------- 83 (370)
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc---c---ccccccceEEECCCCCHHHHHHHH-------
Confidence 344678999999999999999999999999999998864311 1 111112456789999988766655
Q ss_pred CCCCcEEEEcCCCCC
Q 033299 89 DGKLNILVSSSAKVP 103 (122)
Q Consensus 89 ~g~id~lv~~ag~~~ 103 (122)
..+|+|||.|+...
T Consensus 84 -~~~D~Vih~Aa~~~ 97 (370)
T PLN02695 84 -KGVDHVFNLAADMG 97 (370)
T ss_pred -hCCCEEEEcccccC
Confidence 35799999998653
No 262
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=98.95 E-value=9.9e-09 Score=72.65 Aligned_cols=81 Identities=27% Similarity=0.270 Sum_probs=57.1
Q ss_pred EEEEecCCCchHHHHHHHHHHCC--CeEEEeecChhHH---HHHHHHHHhc-------C-CeEEEEeecCCCHH------
Q 033299 15 TALVTGGTRGIGHAIVEELTAFG--AIVHTCSRNETEL---NERIQEWKSK-------G-LKVSGSACDLKIRA------ 75 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~~g--~~v~~~~r~~~~~---~~~~~~~~~~-------~-~~~~~~~~Dv~~~~------ 75 (122)
+++|||++|+||.++++.|+++| ++|+++.|+.+.. +.+.+.+... . .++.++.+|++++.
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 47999999999999999999998 6799999875421 1222222211 0 36888999998653
Q ss_pred HHHHHHHHHHHHcCCCCcEEEEcCCCCC
Q 033299 76 ERQKLMETVCSEFDGKLNILVSSSAKVP 103 (122)
Q Consensus 76 ~~~~~~~~~~~~~~g~id~lv~~ag~~~ 103 (122)
....+. ..+|++||+|+...
T Consensus 81 ~~~~~~--------~~~d~vih~a~~~~ 100 (367)
T TIGR01746 81 EWERLA--------ENVDTIVHNGALVN 100 (367)
T ss_pred HHHHHH--------hhCCEEEeCCcEec
Confidence 222222 46899999999764
No 263
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=98.92 E-value=3.1e-09 Score=73.37 Aligned_cols=61 Identities=21% Similarity=0.360 Sum_probs=53.3
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcEE
Q 033299 16 ALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNIL 95 (122)
Q Consensus 16 ~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~l 95 (122)
++|||++|+||.+++++|.+.|++|+++.|+ .+|+.+.+.+.++++. ..+|+|
T Consensus 2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------------~~d~~~~~~~~~~~~~------~~~d~v 54 (287)
T TIGR01214 2 ILITGANGQLGRELVQQLSPEGRVVVALTSS---------------------QLDLTDPEALERLLRA------IRPDAV 54 (287)
T ss_pred EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------------ccCCCCHHHHHHHHHh------CCCCEE
Confidence 7999999999999999999999999998874 4699999988888754 368999
Q ss_pred EEcCCCCC
Q 033299 96 VSSSAKVP 103 (122)
Q Consensus 96 v~~ag~~~ 103 (122)
||+||...
T Consensus 55 i~~a~~~~ 62 (287)
T TIGR01214 55 VNTAAYTD 62 (287)
T ss_pred EECCcccc
Confidence 99999764
No 264
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=98.91 E-value=1.1e-09 Score=76.13 Aligned_cols=70 Identities=24% Similarity=0.299 Sum_probs=52.0
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcE
Q 033299 15 TALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNI 94 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~ 94 (122)
++||||++|.||.++.+.|.++|+.|+.+.|. .+|++|.+.+.+++++. ++|+
T Consensus 2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------------~~dl~d~~~~~~~~~~~------~pd~ 54 (286)
T PF04321_consen 2 RILITGASGFLGSALARALKERGYEVIATSRS---------------------DLDLTDPEAVAKLLEAF------KPDV 54 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------------CS-TTSHHHHHHHHHHH--------SE
T ss_pred EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------------hcCCCCHHHHHHHHHHh------CCCe
Confidence 68999999999999999999999999988776 67999999998888764 6899
Q ss_pred EEEcCCCCCcchhhccc
Q 033299 95 LVSSSAKVPFELLISEK 111 (122)
Q Consensus 95 lv~~ag~~~~~~~~~~~ 111 (122)
|||+||+......+..+
T Consensus 55 Vin~aa~~~~~~ce~~p 71 (286)
T PF04321_consen 55 VINCAAYTNVDACEKNP 71 (286)
T ss_dssp EEE------HHHHHHSH
T ss_pred EeccceeecHHhhhhCh
Confidence 99999998765544443
No 265
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.91 E-value=4e-09 Score=72.54 Aligned_cols=100 Identities=20% Similarity=0.158 Sum_probs=77.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHH---HHHHH-hcCCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNER---IQEWK-SKGLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~---~~~~~-~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
++|++||||-+|.-|..+++.|+++||.|..+.|..+..... +-+.. ..+.++.+..+|++|..++.++++++
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v--- 77 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV--- 77 (345)
T ss_pred CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc---
Confidence 368999999999999999999999999999887763332221 11111 12345889999999999999999885
Q ss_pred cCCCCcEEEEcCCCCCcchhhccccccCCC
Q 033299 88 FDGKLNILVSSSAKVPFELLISEKLKIQPE 117 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~ 117 (122)
++|-+.|.|+-+..+...+.|..+-..
T Consensus 78 ---~PdEIYNLaAQS~V~vSFe~P~~T~~~ 104 (345)
T COG1089 78 ---QPDEIYNLAAQSHVGVSFEQPEYTADV 104 (345)
T ss_pred ---CchhheeccccccccccccCcceeeee
Confidence 789999999998888777776655443
No 266
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=98.90 E-value=5.6e-09 Score=72.92 Aligned_cols=77 Identities=19% Similarity=0.267 Sum_probs=51.4
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHH--HcCCCCc
Q 033299 16 ALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCS--EFDGKLN 93 (122)
Q Consensus 16 ~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~--~~~g~id 93 (122)
++||||+|+||++++++|++.|+.++++.|+....... . .+..+|+.|......++..+.+ .+ +++|
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~---------~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~d 70 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-V---------NLVDLDIADYMDKEDFLAQIMAGDDF-GDIE 70 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-H---------hhhhhhhhhhhhHHHHHHHHhccccc-CCcc
Confidence 68999999999999999999998666555443221111 0 1224566666555555555442 23 4799
Q ss_pred EEEEcCCCCC
Q 033299 94 ILVSSSAKVP 103 (122)
Q Consensus 94 ~lv~~ag~~~ 103 (122)
+|||.||...
T Consensus 71 ~Vih~A~~~~ 80 (308)
T PRK11150 71 AIFHEGACSS 80 (308)
T ss_pred EEEECceecC
Confidence 9999998654
No 267
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.88 E-value=6.6e-08 Score=63.68 Aligned_cols=85 Identities=22% Similarity=0.228 Sum_probs=66.3
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
.++++.++|.|++|++|+.+++.|...|++|++++|+.++.++..+.+.... ......+|..+.+.+.+.+
T Consensus 25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~-------- 95 (194)
T cd01078 25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAI-------- 95 (194)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHH--------
Confidence 5678999999999999999999999999999999999888887777664321 2334567888887776666
Q ss_pred CCCcEEEEcCCCCC
Q 033299 90 GKLNILVSSSAKVP 103 (122)
Q Consensus 90 g~id~lv~~ag~~~ 103 (122)
...|+||+......
T Consensus 96 ~~~diVi~at~~g~ 109 (194)
T cd01078 96 KGADVVFAAGAAGV 109 (194)
T ss_pred hcCCEEEECCCCCc
Confidence 35788888766544
No 268
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.86 E-value=1.1e-08 Score=71.27 Aligned_cols=78 Identities=27% Similarity=0.223 Sum_probs=60.9
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcEE
Q 033299 16 ALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNIL 95 (122)
Q Consensus 16 ~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~l 95 (122)
+||||++|.||.+++++|.++|+.|+.++|......... ..+.++.+|+++.+.+...++. .+ |.+
T Consensus 3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~------~~-d~v 68 (314)
T COG0451 3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-------SGVEFVVLDLTDRDLVDELAKG------VP-DAV 68 (314)
T ss_pred EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-------cccceeeecccchHHHHHHHhc------CC-CEE
Confidence 899999999999999999999999999999765433322 2577889999998555555432 12 999
Q ss_pred EEcCCCCCcchh
Q 033299 96 VSSSAKVPFELL 107 (122)
Q Consensus 96 v~~ag~~~~~~~ 107 (122)
||.|+.......
T Consensus 69 ih~aa~~~~~~~ 80 (314)
T COG0451 69 IHLAAQSSVPDS 80 (314)
T ss_pred EEccccCchhhh
Confidence 999999875544
No 269
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=98.86 E-value=1.5e-08 Score=73.22 Aligned_cols=84 Identities=21% Similarity=0.284 Sum_probs=64.0
Q ss_pred ccCCCEEEEecC---------------CCc-hHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCC
Q 033299 10 SLKGMTALVTGG---------------TRG-IGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKI 73 (122)
Q Consensus 10 ~~~~~~~litG~---------------~~~-ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 73 (122)
.++||.++|||+ |+| +|.++++.+...|++|+++.++.... ... ....+|+++
T Consensus 182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---------~~~--~~~~~~v~~ 250 (390)
T TIGR00521 182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---------TPP--GVKSIKVST 250 (390)
T ss_pred ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---------CCC--CcEEEEecc
Confidence 378999999999 556 99999999999999999888664321 111 124689999
Q ss_pred HHHH-HHHHHHHHHHcCCCCcEEEEcCCCCCcchhh
Q 033299 74 RAER-QKLMETVCSEFDGKLNILVSSSAKVPFELLI 108 (122)
Q Consensus 74 ~~~~-~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~ 108 (122)
.+.+ ++++++. + +.+|++|+|||+....+..
T Consensus 251 ~~~~~~~~~~~~---~-~~~D~~i~~Aavsd~~~~~ 282 (390)
T TIGR00521 251 AEEMLEAALNEL---A-KDFDIFISAAAVADFKPKT 282 (390)
T ss_pred HHHHHHHHHHhh---c-ccCCEEEEccccccccccc
Confidence 8888 6666443 4 6799999999999776653
No 270
>PRK05865 hypothetical protein; Provisional
Probab=98.86 E-value=2.6e-08 Score=77.91 Aligned_cols=72 Identities=17% Similarity=0.213 Sum_probs=59.3
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcE
Q 033299 15 TALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNI 94 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~ 94 (122)
.++|||++|+||.++++.|+++|++|++++|+.... + ..++.++.+|++|.+.+.+++ ..+|+
T Consensus 2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~---~~~v~~v~gDL~D~~~l~~al--------~~vD~ 64 (854)
T PRK05865 2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W---PSSADFIAADIRDATAVESAM--------TGADV 64 (854)
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c---ccCceEEEeeCCCHHHHHHHH--------hCCCE
Confidence 589999999999999999999999999999874321 1 124778899999999888777 35899
Q ss_pred EEEcCCCCC
Q 033299 95 LVSSSAKVP 103 (122)
Q Consensus 95 lv~~ag~~~ 103 (122)
|||+|+...
T Consensus 65 VVHlAa~~~ 73 (854)
T PRK05865 65 VAHCAWVRG 73 (854)
T ss_pred EEECCCccc
Confidence 999998653
No 271
>PLN02206 UDP-glucuronate decarboxylase
Probab=98.83 E-value=1.2e-08 Score=74.93 Aligned_cols=78 Identities=19% Similarity=0.207 Sum_probs=55.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHH-HHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNE-RIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDG 90 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g 90 (122)
+++.++|||++|.||.++++.|+++|++|+++++......+ ....+ ...++.++..|+.+.. + .
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~--~~~~~~~i~~D~~~~~-----l--------~ 182 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHF--SNPNFELIRHDVVEPI-----L--------L 182 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhc--cCCceEEEECCccChh-----h--------c
Confidence 56789999999999999999999999999988765322111 11111 1235677788886642 1 2
Q ss_pred CCcEEEEcCCCCCc
Q 033299 91 KLNILVSSSAKVPF 104 (122)
Q Consensus 91 ~id~lv~~ag~~~~ 104 (122)
.+|+|||.|+....
T Consensus 183 ~~D~ViHlAa~~~~ 196 (442)
T PLN02206 183 EVDQIYHLACPASP 196 (442)
T ss_pred CCCEEEEeeeecch
Confidence 48999999997653
No 272
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=98.80 E-value=1.5e-08 Score=70.02 Aligned_cols=75 Identities=17% Similarity=0.185 Sum_probs=61.9
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcEE
Q 033299 16 ALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNIL 95 (122)
Q Consensus 16 ~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~l 95 (122)
+||||++|-+|.+|++.|. .++.|+.+++.. +|++|.+.+.+++.+. ++|+|
T Consensus 3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------------~Ditd~~~v~~~i~~~------~PDvV 54 (281)
T COG1091 3 ILITGANGQLGTELRRALP-GEFEVIATDRAE---------------------LDITDPDAVLEVIRET------RPDVV 54 (281)
T ss_pred EEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------------ccccChHHHHHHHHhh------CCCEE
Confidence 8999999999999999998 668898887754 7999999999999874 78999
Q ss_pred EEcCCCCCcchhhccccccCCCC
Q 033299 96 VSSSAKVPFELLISEKLKIQPEN 118 (122)
Q Consensus 96 v~~ag~~~~~~~~~~~~~~~~~n 118 (122)
||.|++......+.++......|
T Consensus 55 In~AAyt~vD~aE~~~e~A~~vN 77 (281)
T COG1091 55 INAAAYTAVDKAESEPELAFAVN 77 (281)
T ss_pred EECccccccccccCCHHHHHHhH
Confidence 99999997766655554443333
No 273
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=98.79 E-value=1.9e-08 Score=73.80 Aligned_cols=78 Identities=15% Similarity=0.120 Sum_probs=55.0
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCC
Q 033299 13 GMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKL 92 (122)
Q Consensus 13 ~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~i 92 (122)
.+.++|||++|+||.++++.|+++|++|++++|...........+.. ..++.++..|+.+.. + ..+
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~-~~~~~~~~~Di~~~~-----~--------~~~ 185 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFG-NPRFELIRHDVVEPI-----L--------LEV 185 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhcc-CCceEEEECcccccc-----c--------cCC
Confidence 45799999999999999999999999999998753221111111111 125677788886542 1 258
Q ss_pred cEEEEcCCCCCc
Q 033299 93 NILVSSSAKVPF 104 (122)
Q Consensus 93 d~lv~~ag~~~~ 104 (122)
|+|||.|+....
T Consensus 186 D~ViHlAa~~~~ 197 (436)
T PLN02166 186 DQIYHLACPASP 197 (436)
T ss_pred CEEEECceeccc
Confidence 999999987543
No 274
>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.76 E-value=2.1e-09 Score=71.65 Aligned_cols=92 Identities=18% Similarity=0.132 Sum_probs=61.4
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHh-cCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKS-KGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
..++.+|+||+|.|||..++..+..++-......++....+ .+.+.. .+........|++..+...++++...+.+
T Consensus 4 ~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~- 80 (253)
T KOG1204|consen 4 NMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKG- 80 (253)
T ss_pred ccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcC-
Confidence 34678899999999999999888877644333222221111 111111 12223345567777777888888888887
Q ss_pred CCCcEEEEcCCCCCcc
Q 033299 90 GKLNILVSSSAKVPFE 105 (122)
Q Consensus 90 g~id~lv~~ag~~~~~ 105 (122)
++.|++|||||...+.
T Consensus 81 gkr~iiI~NAG~lgdv 96 (253)
T KOG1204|consen 81 GKRDIIIHNAGSLGDV 96 (253)
T ss_pred CceeEEEecCCCccch
Confidence 7999999999998654
No 275
>PLN02778 3,5-epimerase/4-reductase
Probab=98.73 E-value=3.7e-08 Score=68.92 Aligned_cols=62 Identities=19% Similarity=0.105 Sum_probs=46.4
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCC
Q 033299 13 GMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKL 92 (122)
Q Consensus 13 ~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~i 92 (122)
.+.+||||++|.||.++++.|.++|++|+... .|+.+.+.+...++. .++
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~------------------------~~~~~~~~v~~~l~~------~~~ 58 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS------------------------GRLENRASLEADIDA------VKP 58 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec------------------------CccCCHHHHHHHHHh------cCC
Confidence 35799999999999999999999999886432 234455544444432 258
Q ss_pred cEEEEcCCCCCc
Q 033299 93 NILVSSSAKVPF 104 (122)
Q Consensus 93 d~lv~~ag~~~~ 104 (122)
|+|||.||....
T Consensus 59 D~ViH~Aa~~~~ 70 (298)
T PLN02778 59 THVFNAAGVTGR 70 (298)
T ss_pred CEEEECCcccCC
Confidence 999999998753
No 276
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=98.72 E-value=7.6e-08 Score=67.15 Aligned_cols=77 Identities=19% Similarity=0.164 Sum_probs=54.2
Q ss_pred EEEecCCCchHHHHHHHHHHCCC-eEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcE
Q 033299 16 ALVTGGTRGIGHAIVEELTAFGA-IVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNI 94 (122)
Q Consensus 16 ~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~ 94 (122)
+||||++|+||.++++.|.++|+ .|++++|..... .. ..+. ...+..|+.+.+.++.+.+. .+ +.+|+
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~~-----~~~~~~d~~~~~~~~~~~~~---~~-~~~D~ 69 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KF-LNLA-----DLVIADYIDKEDFLDRLEKG---AF-GKIEA 69 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hh-hhhh-----heeeeccCcchhHHHHHHhh---cc-CCCCE
Confidence 58999999999999999999997 688877654321 11 1111 12456788887766655542 23 57999
Q ss_pred EEEcCCCCC
Q 033299 95 LVSSSAKVP 103 (122)
Q Consensus 95 lv~~ag~~~ 103 (122)
|||+|+...
T Consensus 70 vvh~A~~~~ 78 (314)
T TIGR02197 70 IFHQGACSD 78 (314)
T ss_pred EEECccccC
Confidence 999999753
No 277
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.72 E-value=1.6e-07 Score=71.76 Aligned_cols=83 Identities=24% Similarity=0.189 Sum_probs=57.1
Q ss_pred EEEEecCCCchHHHHHHHHH--HCCCeEEEeecChhHHHHHHHHHHhcC-CeEEEEeecCCCHHHH--HHHHHHHHHHcC
Q 033299 15 TALVTGGTRGIGHAIVEELT--AFGAIVHTCSRNETELNERIQEWKSKG-LKVSGSACDLKIRAER--QKLMETVCSEFD 89 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~--~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~~--~~~~~~~~~~~~ 89 (122)
++||||++|.||.++++.|+ ..|++|+++.|+... ..........+ .++.++.+|+++++.. ...++. .
T Consensus 2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~----l- 75 (657)
T PRK07201 2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAE----L- 75 (657)
T ss_pred eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHH----h-
Confidence 69999999999999999999 578999999996432 11111111112 4688899999985320 112222 2
Q ss_pred CCCcEEEEcCCCCC
Q 033299 90 GKLNILVSSSAKVP 103 (122)
Q Consensus 90 g~id~lv~~ag~~~ 103 (122)
..+|+|||+||...
T Consensus 76 ~~~D~Vih~Aa~~~ 89 (657)
T PRK07201 76 GDIDHVVHLAAIYD 89 (657)
T ss_pred cCCCEEEECceeec
Confidence 36899999999764
No 278
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=98.71 E-value=3.1e-08 Score=68.84 Aligned_cols=61 Identities=26% Similarity=0.333 Sum_probs=49.8
Q ss_pred EEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcEEE
Q 033299 17 LVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILV 96 (122)
Q Consensus 17 litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~lv 96 (122)
|||||+|.||.++++.|.+.|+.|+++.+. ..+|+++.+++.++++. ..+|+||
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~--------------------~~~Dl~~~~~l~~~~~~------~~~d~Vi 54 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH--------------------KELDLTRQADVEAFFAK------EKPTYVI 54 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc--------------------ccCCCCCHHHHHHHHhc------cCCCEEE
Confidence 689999999999999999999887765432 14799999988888765 2579999
Q ss_pred EcCCCCC
Q 033299 97 SSSAKVP 103 (122)
Q Consensus 97 ~~ag~~~ 103 (122)
|+|+...
T Consensus 55 h~A~~~~ 61 (306)
T PLN02725 55 LAAAKVG 61 (306)
T ss_pred Eeeeeec
Confidence 9998753
No 279
>PRK12320 hypothetical protein; Provisional
Probab=98.70 E-value=1.5e-07 Score=72.40 Aligned_cols=71 Identities=20% Similarity=0.269 Sum_probs=55.7
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcE
Q 033299 15 TALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNI 94 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~ 94 (122)
.++|||++|+||.++++.|.++|++|++++|..... ...++.++.+|++++. +.+++ ..+|+
T Consensus 2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---------~~~~ve~v~~Dl~d~~-l~~al--------~~~D~ 63 (699)
T PRK12320 2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---------LDPRVDYVCASLRNPV-LQELA--------GEADA 63 (699)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---------ccCCceEEEccCCCHH-HHHHh--------cCCCE
Confidence 589999999999999999999999999999864321 1125778899999974 33333 35899
Q ss_pred EEEcCCCCC
Q 033299 95 LVSSSAKVP 103 (122)
Q Consensus 95 lv~~ag~~~ 103 (122)
|||.|+...
T Consensus 64 VIHLAa~~~ 72 (699)
T PRK12320 64 VIHLAPVDT 72 (699)
T ss_pred EEEcCccCc
Confidence 999998753
No 280
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=98.69 E-value=4.8e-08 Score=67.56 Aligned_cols=77 Identities=16% Similarity=0.149 Sum_probs=58.3
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcEE
Q 033299 16 ALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNIL 95 (122)
Q Consensus 16 ~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~l 95 (122)
++|||++|.+|.+++++|.+.|++|.++.|+.+... ...+..+.+|+.|++++..+++.. +.+.|.+|.+
T Consensus 2 ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---------~~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~v 71 (285)
T TIGR03649 2 ILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---------GPNEKHVKFDWLDEDTWDNPFSSD-DGMEPEISAV 71 (285)
T ss_pred EEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---------CCCCccccccCCCHHHHHHHHhcc-cCcCCceeEE
Confidence 789999999999999999999999999999876431 013455678999999988888542 2221237888
Q ss_pred EEcCCCC
Q 033299 96 VSSSAKV 102 (122)
Q Consensus 96 v~~ag~~ 102 (122)
+++++..
T Consensus 72 ~~~~~~~ 78 (285)
T TIGR03649 72 YLVAPPI 78 (285)
T ss_pred EEeCCCC
Confidence 8877643
No 281
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.69 E-value=3.8e-08 Score=67.82 Aligned_cols=97 Identities=19% Similarity=0.184 Sum_probs=69.6
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
+-..+++++||||+|+||++++++|..+|+.|++++.-..........+-. ..++..+.-|+..+ ++
T Consensus 23 ~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~-~~~fel~~hdv~~p-----l~------- 89 (350)
T KOG1429|consen 23 KPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIG-HPNFELIRHDVVEP-----LL------- 89 (350)
T ss_pred cCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhcc-CcceeEEEeechhH-----HH-------
Confidence 445678999999999999999999999999999998765544333333332 24677788888775 33
Q ss_pred CCCCcEEEEcCCCCCcchhhccccccCCCCC
Q 033299 89 DGKLNILVSSSAKVPFELLISEKLKIQPENS 119 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~n~ 119 (122)
.-+|-++|.|....+......+.++.-.|+
T Consensus 90 -~evD~IyhLAapasp~~y~~npvktIktN~ 119 (350)
T KOG1429|consen 90 -KEVDQIYHLAAPASPPHYKYNPVKTIKTNV 119 (350)
T ss_pred -HHhhhhhhhccCCCCcccccCccceeeecc
Confidence 236778888888776666666666554443
No 282
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=98.67 E-value=1.1e-07 Score=67.81 Aligned_cols=87 Identities=18% Similarity=0.171 Sum_probs=62.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCC--CeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFG--AIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
++.+++||||+|.+|++++..|++.+ ..+.+++..+.......+....+..++..+.+|+.+...+.+.+
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~-------- 74 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAF-------- 74 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhc--------
Confidence 45789999999999999999999988 67888887654211111111113457889999999999888887
Q ss_pred CCCcEEEEcCCCCCcchh
Q 033299 90 GKLNILVSSSAKVPFELL 107 (122)
Q Consensus 90 g~id~lv~~ag~~~~~~~ 107 (122)
.+. .+||+|+...+...
T Consensus 75 ~~~-~Vvh~aa~~~~~~~ 91 (361)
T KOG1430|consen 75 QGA-VVVHCAASPVPDFV 91 (361)
T ss_pred cCc-eEEEeccccCcccc
Confidence 345 67777666554433
No 283
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=98.66 E-value=3.5e-07 Score=67.21 Aligned_cols=81 Identities=23% Similarity=0.248 Sum_probs=61.3
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecCh-hHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNE-TELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
.+++|.++|+|+++ +|.++++.|++.|++|.+++++. +...+...++...+ +.++..|..+. ..
T Consensus 2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~------------~~ 66 (450)
T PRK14106 2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELG--IELVLGEYPEE------------FL 66 (450)
T ss_pred CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CEEEeCCcchh------------Hh
Confidence 46789999999866 99999999999999999999875 44444455554443 45667777661 12
Q ss_pred CCCCcEEEEcCCCCCcch
Q 033299 89 DGKLNILVSSSAKVPFEL 106 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~~ 106 (122)
+.+|+||+++|+....+
T Consensus 67 -~~~d~vv~~~g~~~~~~ 83 (450)
T PRK14106 67 -EGVDLVVVSPGVPLDSP 83 (450)
T ss_pred -hcCCEEEECCCCCCCCH
Confidence 57899999999875554
No 284
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=98.65 E-value=4e-07 Score=65.82 Aligned_cols=76 Identities=20% Similarity=0.274 Sum_probs=59.4
Q ss_pred EEEecCCCchHHHHHHHHHHCC-C-eEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCc
Q 033299 16 ALVTGGTRGIGHAIVEELTAFG-A-IVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLN 93 (122)
Q Consensus 16 ~litG~~~~ig~~~~~~l~~~g-~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id 93 (122)
++|.|+ |.+|..+++.|++.+ . +|++++|+.++++...+++ .+.++.+..+|+.|.+++.+++ ...|
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~--------~~~d 69 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELL--------RGCD 69 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHH--------TTSS
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHH--------hcCC
Confidence 588999 999999999999987 4 7999999999888776654 3457999999999999988887 4569
Q ss_pred EEEEcCCCC
Q 033299 94 ILVSSSAKV 102 (122)
Q Consensus 94 ~lv~~ag~~ 102 (122)
+|||++|..
T Consensus 70 vVin~~gp~ 78 (386)
T PF03435_consen 70 VVINCAGPF 78 (386)
T ss_dssp EEEE-SSGG
T ss_pred EEEECCccc
Confidence 999999976
No 285
>PLN02996 fatty acyl-CoA reductase
Probab=98.64 E-value=5.3e-07 Score=67.20 Aligned_cols=87 Identities=23% Similarity=0.285 Sum_probs=58.8
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCC---CeEEEeecChhH--HHHHH-HHH---------Hh-c--------CCeEE
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFG---AIVHTCSRNETE--LNERI-QEW---------KS-K--------GLKVS 65 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g---~~v~~~~r~~~~--~~~~~-~~~---------~~-~--------~~~~~ 65 (122)
-+++|+++|||++|+||..++++|+..+ .+|+++.|.... ..+.. .++ .. . ..++.
T Consensus 8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~ 87 (491)
T PLN02996 8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT 87 (491)
T ss_pred HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence 3678999999999999999999998764 357887775421 11111 111 11 0 14688
Q ss_pred EEeecCCC-------HHHHHHHHHHHHHHcCCCCcEEEEcCCCCCc
Q 033299 66 GSACDLKI-------RAERQKLMETVCSEFDGKLNILVSSSAKVPF 104 (122)
Q Consensus 66 ~~~~Dv~~-------~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~ 104 (122)
++..|++. .+.++.++ ..+|+|||+|+....
T Consensus 88 ~i~GDl~~~~LGLs~~~~~~~l~--------~~vD~ViH~AA~v~~ 125 (491)
T PLN02996 88 PVPGDISYDDLGVKDSNLREEMW--------KEIDIVVNLAATTNF 125 (491)
T ss_pred EEecccCCcCCCCChHHHHHHHH--------hCCCEEEECccccCC
Confidence 99999984 33344444 358999999998753
No 286
>PLN02503 fatty acyl-CoA reductase 2
Probab=98.62 E-value=4.5e-07 Score=68.91 Aligned_cols=86 Identities=16% Similarity=0.254 Sum_probs=59.4
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHCCC---eEEEeecChh--HHHHHH-HHH---------Hhc---------CCeEEE
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAFGA---IVHTCSRNET--ELNERI-QEW---------KSK---------GLKVSG 66 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~g~---~v~~~~r~~~--~~~~~~-~~~---------~~~---------~~~~~~ 66 (122)
+++|+++||||+|+||..++++|+..+. +|+++.|... ...+.. +++ ++. ..++.+
T Consensus 117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~ 196 (605)
T PLN02503 117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP 196 (605)
T ss_pred hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence 5789999999999999999999998653 6788877532 122222 121 111 236888
Q ss_pred EeecCCCHH------HHHHHHHHHHHHcCCCCcEEEEcCCCCCc
Q 033299 67 SACDLKIRA------ERQKLMETVCSEFDGKLNILVSSSAKVPF 104 (122)
Q Consensus 67 ~~~Dv~~~~------~~~~~~~~~~~~~~g~id~lv~~ag~~~~ 104 (122)
+..|++++. ..+.+. ..+|+|||+|+....
T Consensus 197 v~GDl~d~~LGLs~~~~~~L~--------~~vDiVIH~AA~v~f 232 (605)
T PLN02503 197 VVGNVCESNLGLEPDLADEIA--------KEVDVIINSAANTTF 232 (605)
T ss_pred EEeeCCCcccCCCHHHHHHHH--------hcCCEEEECcccccc
Confidence 999999872 233322 358999999998753
No 287
>PRK09620 hypothetical protein; Provisional
Probab=98.62 E-value=1e-07 Score=64.50 Aligned_cols=86 Identities=23% Similarity=0.287 Sum_probs=53.9
Q ss_pred cCCCEEEEecCC----------------CchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCH
Q 033299 11 LKGMTALVTGGT----------------RGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIR 74 (122)
Q Consensus 11 ~~~~~~litG~~----------------~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 74 (122)
+.||.+|||+|. |.+|.++++.|+.+|+.|+++++....... .+. .+.....+..+..
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~~-~~~~~~~V~s~~d-- 74 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DIN-NQLELHPFEGIID-- 74 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---ccC-CceeEEEEecHHH--
Confidence 468999999885 899999999999999999988754221100 000 0112333333222
Q ss_pred HHHHHHHHHHHHHcCCCCcEEEEcCCCCCcch
Q 033299 75 AERQKLMETVCSEFDGKLNILVSSSAKVPFEL 106 (122)
Q Consensus 75 ~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~ 106 (122)
+...+.++.+. ..+|++||.|++....+
T Consensus 75 --~~~~l~~~~~~--~~~D~VIH~AAvsD~~~ 102 (229)
T PRK09620 75 --LQDKMKSIITH--EKVDAVIMAAAGSDWVV 102 (229)
T ss_pred --HHHHHHHHhcc--cCCCEEEECccccceec
Confidence 22233333332 25899999999987665
No 288
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=98.61 E-value=8.5e-07 Score=59.70 Aligned_cols=76 Identities=21% Similarity=0.269 Sum_probs=59.5
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcEE
Q 033299 16 ALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNIL 95 (122)
Q Consensus 16 ~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~l 95 (122)
++|+|++|.+|..+++.|++.+++|.++.|+... +..++++..+ +..+..|+.|.+++.+++ ..+|.|
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~g--~~vv~~d~~~~~~l~~al--------~g~d~v 68 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQALG--AEVVEADYDDPESLVAAL--------KGVDAV 68 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHTT--TEEEES-TT-HHHHHHHH--------TTCSEE
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhccc--ceEeecccCCHHHHHHHH--------cCCceE
Confidence 6899999999999999999999999999998743 3344555444 456699999999888888 468999
Q ss_pred EEcCCCCC
Q 033299 96 VSSSAKVP 103 (122)
Q Consensus 96 v~~ag~~~ 103 (122)
|++.+...
T Consensus 69 ~~~~~~~~ 76 (233)
T PF05368_consen 69 FSVTPPSH 76 (233)
T ss_dssp EEESSCSC
T ss_pred EeecCcch
Confidence 98888653
No 289
>PLN00016 RNA-binding protein; Provisional
Probab=98.58 E-value=2.3e-07 Score=66.80 Aligned_cols=39 Identities=26% Similarity=0.373 Sum_probs=34.8
Q ss_pred cCCCEEEEe----cCCCchHHHHHHHHHHCCCeEEEeecChhH
Q 033299 11 LKGMTALVT----GGTRGIGHAIVEELTAFGAIVHTCSRNETE 49 (122)
Q Consensus 11 ~~~~~~lit----G~~~~ig~~~~~~l~~~g~~v~~~~r~~~~ 49 (122)
.+.+.++|| |++|.||.++++.|+++|++|+++.|+...
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~ 92 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEP 92 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcc
Confidence 345789999 999999999999999999999999998654
No 290
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=98.58 E-value=2.8e-07 Score=62.88 Aligned_cols=81 Identities=22% Similarity=0.295 Sum_probs=48.2
Q ss_pred EecCCCchHHHHHHHHHHCCC--eEEEeecChhH--HHHHH-HHHHh----------cCCeEEEEeecCCCHH------H
Q 033299 18 VTGGTRGIGHAIVEELTAFGA--IVHTCSRNETE--LNERI-QEWKS----------KGLKVSGSACDLKIRA------E 76 (122)
Q Consensus 18 itG~~~~ig~~~~~~l~~~g~--~v~~~~r~~~~--~~~~~-~~~~~----------~~~~~~~~~~Dv~~~~------~ 76 (122)
|||++|++|.++.++|++.+. +|+++.|..+. ..+.+ +.+.. ...++.++..|++++. .
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999875 89999987532 22222 22111 1458999999999854 2
Q ss_pred HHHHHHHHHHHcCCCCcEEEEcCCCCCcch
Q 033299 77 RQKLMETVCSEFDGKLNILVSSSAKVPFEL 106 (122)
Q Consensus 77 ~~~~~~~~~~~~~g~id~lv~~ag~~~~~~ 106 (122)
.+.+. ..+|+|||+|+......
T Consensus 81 ~~~L~--------~~v~~IiH~Aa~v~~~~ 102 (249)
T PF07993_consen 81 YQELA--------EEVDVIIHCAASVNFNA 102 (249)
T ss_dssp HHHHH--------HH--EEEE--SS-SBS-
T ss_pred hhccc--------cccceeeecchhhhhcc
Confidence 33332 35899999999886543
No 291
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.57 E-value=7.6e-07 Score=64.24 Aligned_cols=80 Identities=18% Similarity=0.222 Sum_probs=66.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC-CeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCC
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFG-AIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKL 92 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~i 92 (122)
+.+||.|+ |++|+.+++.|+..+ .+|.+++|+.++..+...... .++.+.++|+.|.+.+.+++.+ .
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~---~~v~~~~vD~~d~~al~~li~~--------~ 69 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIG---GKVEALQVDAADVDALVALIKD--------F 69 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhcc---ccceeEEecccChHHHHHHHhc--------C
Confidence 56888998 999999999999998 899999999888776655432 3788999999999998888843 3
Q ss_pred cEEEEcCCCCCcc
Q 033299 93 NILVSSSAKVPFE 105 (122)
Q Consensus 93 d~lv~~ag~~~~~ 105 (122)
|++||.+......
T Consensus 70 d~VIn~~p~~~~~ 82 (389)
T COG1748 70 DLVINAAPPFVDL 82 (389)
T ss_pred CEEEEeCCchhhH
Confidence 9999998876543
No 292
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.53 E-value=1.3e-06 Score=62.48 Aligned_cols=82 Identities=23% Similarity=0.237 Sum_probs=59.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC-CeEEEeecChh---HHHHHHHHHH-------hcCCeEEEEeecCCC------HHH
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFG-AIVHTCSRNET---ELNERIQEWK-------SKGLKVSGSACDLKI------RAE 76 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g-~~v~~~~r~~~---~~~~~~~~~~-------~~~~~~~~~~~Dv~~------~~~ 76 (122)
+++++|||+|++|..+.+.|+.+- .+|++..|-.+ ....+.+.+. ....++..+..|++. ..+
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 478999999999999999998764 68998877533 2222333332 124679999999983 344
Q ss_pred HHHHHHHHHHHcCCCCcEEEEcCCCCC
Q 033299 77 RQKLMETVCSEFDGKLNILVSSSAKVP 103 (122)
Q Consensus 77 ~~~~~~~~~~~~~g~id~lv~~ag~~~ 103 (122)
++++. ..+|.||||++...
T Consensus 81 ~~~La--------~~vD~I~H~gA~Vn 99 (382)
T COG3320 81 WQELA--------ENVDLIIHNAALVN 99 (382)
T ss_pred HHHHh--------hhcceEEecchhhc
Confidence 44444 56999999999876
No 293
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=98.51 E-value=7.5e-07 Score=63.20 Aligned_cols=81 Identities=20% Similarity=0.218 Sum_probs=68.7
Q ss_pred EEEEecCCCchHHHHHHHHHH----CCCeEEEeecChhHHHHHHHHHHhcC----CeEEEEeecCCCHHHHHHHHHHHHH
Q 033299 15 TALVTGGTRGIGHAIVEELTA----FGAIVHTCSRNETELNERIQEWKSKG----LKVSGSACDLKIRAERQKLMETVCS 86 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~----~g~~v~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~~~~~~~~~~~ 86 (122)
-++|-||+|.-|..+++.+.. .+..+.+++|+++++++.+..+.... .+..++.||.+|++++.++..
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak---- 82 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK---- 82 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh----
Confidence 478999999999999999998 67889999999999999888876543 233488999999999999884
Q ss_pred HcCCCCcEEEEcCCCCC
Q 033299 87 EFDGKLNILVSSSAKVP 103 (122)
Q Consensus 87 ~~~g~id~lv~~ag~~~ 103 (122)
+..+|||++|-..
T Consensus 83 ----~~~vivN~vGPyR 95 (423)
T KOG2733|consen 83 ----QARVIVNCVGPYR 95 (423)
T ss_pred ----hhEEEEeccccce
Confidence 5689999999763
No 294
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.47 E-value=1.8e-06 Score=58.93 Aligned_cols=74 Identities=26% Similarity=0.150 Sum_probs=60.7
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcE
Q 033299 15 TALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNI 94 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~ 94 (122)
.++|||++|.+|.++++.|...|+.|.+..|+.+...... ..+.....|+.+..++...+ ...+.
T Consensus 2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-------~~v~~~~~d~~~~~~l~~a~--------~G~~~ 66 (275)
T COG0702 2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-------GGVEVVLGDLRDPKSLVAGA--------KGVDG 66 (275)
T ss_pred eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-------CCcEEEEeccCCHhHHHHHh--------ccccE
Confidence 6899999999999999999999999999999988766543 35778889999998887777 35677
Q ss_pred EEEcCCCCC
Q 033299 95 LVSSSAKVP 103 (122)
Q Consensus 95 lv~~ag~~~ 103 (122)
+++..+...
T Consensus 67 ~~~i~~~~~ 75 (275)
T COG0702 67 VLLISGLLD 75 (275)
T ss_pred EEEEecccc
Confidence 766666543
No 295
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=98.46 E-value=4.1e-07 Score=62.54 Aligned_cols=70 Identities=19% Similarity=0.268 Sum_probs=48.8
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcEE
Q 033299 16 ALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNIL 95 (122)
Q Consensus 16 ~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~l 95 (122)
++|||++|.||++++..|.+.|+.|+++.|+..+...... . .+...+.+.+... .++|+|
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~------~-------~v~~~~~~~~~~~-------~~~Dav 60 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH------P-------NVTLWEGLADALT-------LGIDAV 60 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC------c-------cccccchhhhccc-------CCCCEE
Confidence 5899999999999999999999999999999775443211 0 1111122222221 269999
Q ss_pred EEcCCCCCcc
Q 033299 96 VSSSAKVPFE 105 (122)
Q Consensus 96 v~~ag~~~~~ 105 (122)
||.||..-..
T Consensus 61 INLAG~~I~~ 70 (297)
T COG1090 61 INLAGEPIAE 70 (297)
T ss_pred EECCCCcccc
Confidence 9999987443
No 296
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.46 E-value=3.6e-07 Score=61.92 Aligned_cols=60 Identities=18% Similarity=0.144 Sum_probs=48.7
Q ss_pred HHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcEEEEcCCCCC
Q 033299 29 IVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVSSSAKVP 103 (122)
Q Consensus 29 ~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~ 103 (122)
+++.|+++|++|++++|+.++.. . ..++.+|++|.++++++++++. +++|+||||||+..
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~------~~~~~~Dl~~~~~v~~~~~~~~----~~iD~li~nAG~~~ 60 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT-----L------DGFIQADLGDPASIDAAVAALP----GRIDALFNIAGVPG 60 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh-----h------hHhhcccCCCHHHHHHHHHHhc----CCCeEEEECCCCCC
Confidence 47889999999999999876531 1 2357899999999999988762 68999999999864
No 297
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=98.45 E-value=3.5e-07 Score=63.09 Aligned_cols=69 Identities=19% Similarity=0.139 Sum_probs=47.3
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcEE
Q 033299 16 ALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNIL 95 (122)
Q Consensus 16 ~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~l 95 (122)
+||||++|.||.++++.|+++|++|+++.|+.+...... ... ..|+.. .. ..+.+ ..+|+|
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~--~~~~~~-~~-------~~~~~-~~~D~V 61 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK--------WEG--YKPWAP-LA-------ESEAL-EGADAV 61 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc--------cee--eecccc-cc-------hhhhc-CCCCEE
Confidence 589999999999999999999999999999876432110 000 112222 11 12233 569999
Q ss_pred EEcCCCCC
Q 033299 96 VSSSAKVP 103 (122)
Q Consensus 96 v~~ag~~~ 103 (122)
||+||...
T Consensus 62 vh~a~~~~ 69 (292)
T TIGR01777 62 INLAGEPI 69 (292)
T ss_pred EECCCCCc
Confidence 99999754
No 298
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=98.44 E-value=1.8e-06 Score=58.47 Aligned_cols=78 Identities=18% Similarity=0.131 Sum_probs=48.7
Q ss_pred EEEecCCC-chHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcE
Q 033299 16 ALVTGGTR-GIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNI 94 (122)
Q Consensus 16 ~litG~~~-~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~ 94 (122)
=.||+.++ ++|.++++.|+++|+.|++++|..... .. ...++.++.++ +. .+..+.+.+.+ +.+|+
T Consensus 18 R~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~-----~~--~~~~v~~i~v~--s~---~~m~~~l~~~~-~~~Di 84 (229)
T PRK06732 18 RGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK-----PE--PHPNLSIIEIE--NV---DDLLETLEPLV-KDHDV 84 (229)
T ss_pred eeecCccchHHHHHHHHHHHhCCCEEEEEECccccc-----CC--CCCCeEEEEEe--cH---HHHHHHHHHHh-cCCCE
Confidence 35665554 599999999999999999988754210 00 01234444432 22 23333333344 57899
Q ss_pred EEEcCCCCCcch
Q 033299 95 LVSSSAKVPFEL 106 (122)
Q Consensus 95 lv~~ag~~~~~~ 106 (122)
+||+||+....+
T Consensus 85 vIh~AAvsd~~~ 96 (229)
T PRK06732 85 LIHSMAVSDYTP 96 (229)
T ss_pred EEeCCccCCcee
Confidence 999999986443
No 299
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.44 E-value=1.8e-06 Score=53.81 Aligned_cols=80 Identities=19% Similarity=0.289 Sum_probs=60.1
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAI-VHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
.+++++.++|.|+ ||.|++++..|...|.+ |.++.|+.++++++.+++.. ..+.+... .+.. +.+
T Consensus 8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~--~~~~~~~~--~~~~---~~~------ 73 (135)
T PF01488_consen 8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGG--VNIEAIPL--EDLE---EAL------ 73 (135)
T ss_dssp STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTG--CSEEEEEG--GGHC---HHH------
T ss_pred CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCc--cccceeeH--HHHH---HHH------
Confidence 4788999999998 99999999999999975 99999999999988888732 23444433 2322 222
Q ss_pred cCCCCcEEEEcCCCCCc
Q 033299 88 FDGKLNILVSSSAKVPF 104 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~~ 104 (122)
...|++|+..+....
T Consensus 74 --~~~DivI~aT~~~~~ 88 (135)
T PF01488_consen 74 --QEADIVINATPSGMP 88 (135)
T ss_dssp --HTESEEEE-SSTTST
T ss_pred --hhCCeEEEecCCCCc
Confidence 468999999887643
No 300
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.38 E-value=1.2e-06 Score=67.39 Aligned_cols=60 Identities=15% Similarity=0.082 Sum_probs=47.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCc
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLN 93 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id 93 (122)
+.+||||++|.||.++++.|..+|+.|.. ...|++|.+.+..++.. . ++|
T Consensus 381 mkiLVtGa~G~iG~~l~~~L~~~g~~v~~------------------------~~~~l~d~~~v~~~i~~----~--~pd 430 (668)
T PLN02260 381 LKFLIYGRTGWIGGLLGKLCEKQGIAYEY------------------------GKGRLEDRSSLLADIRN----V--KPT 430 (668)
T ss_pred ceEEEECCCchHHHHHHHHHHhCCCeEEe------------------------eccccccHHHHHHHHHh----h--CCC
Confidence 47999999999999999999999987731 11357787777666654 2 689
Q ss_pred EEEEcCCCCC
Q 033299 94 ILVSSSAKVP 103 (122)
Q Consensus 94 ~lv~~ag~~~ 103 (122)
+|||+|+...
T Consensus 431 ~Vih~Aa~~~ 440 (668)
T PLN02260 431 HVFNAAGVTG 440 (668)
T ss_pred EEEECCcccC
Confidence 9999999874
No 301
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.35 E-value=7.1e-06 Score=58.49 Aligned_cols=75 Identities=24% Similarity=0.232 Sum_probs=54.5
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHC-C-CeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAF-G-AIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~-g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
.+.+++++||||+|.||..++++|..+ | ..++++.|+.+++..+..++. ..++. .+.+ .
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~---------~~~i~---~l~~-------~ 212 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELG---------GGKIL---SLEE-------A 212 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhc---------cccHH---hHHH-------H
Confidence 578899999999999999999999864 5 589999998877766554432 11222 1222 2
Q ss_pred cCCCCcEEEEcCCCCCc
Q 033299 88 FDGKLNILVSSSAKVPF 104 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~~ 104 (122)
+ ...|++|+.++....
T Consensus 213 l-~~aDiVv~~ts~~~~ 228 (340)
T PRK14982 213 L-PEADIVVWVASMPKG 228 (340)
T ss_pred H-ccCCEEEECCcCCcC
Confidence 3 568999999998543
No 302
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=98.26 E-value=5.9e-06 Score=60.76 Aligned_cols=84 Identities=21% Similarity=0.223 Sum_probs=56.2
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
.+.+|.++|||+++ +|.+.++.|++.|+.|++.+++..........+...+.++ .... +... ++ .
T Consensus 2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~--~~~~--~~~~---~~------~- 66 (447)
T PRK02472 2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKV--ICGS--HPLE---LL------D- 66 (447)
T ss_pred CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEE--EeCC--CCHH---Hh------c-
Confidence 36789999999975 9999999999999999999876544333444454443322 2111 1111 11 0
Q ss_pred CCCcEEEEcCCCCCcchhh
Q 033299 90 GKLNILVSSSAKVPFELLI 108 (122)
Q Consensus 90 g~id~lv~~ag~~~~~~~~ 108 (122)
..+|+||+++|+....+..
T Consensus 67 ~~~d~vV~s~gi~~~~~~~ 85 (447)
T PRK02472 67 EDFDLMVKNPGIPYTNPMV 85 (447)
T ss_pred CcCCEEEECCCCCCCCHHH
Confidence 2489999999998766543
No 303
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=98.25 E-value=1.6e-05 Score=65.48 Aligned_cols=87 Identities=16% Similarity=0.165 Sum_probs=57.5
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCC----CeEEEeecChhHH---HHHHHHHHhc-------CCeEEEEeecCCCHHHH-
Q 033299 13 GMTALVTGGTRGIGHAIVEELTAFG----AIVHTCSRNETEL---NERIQEWKSK-------GLKVSGSACDLKIRAER- 77 (122)
Q Consensus 13 ~~~~litG~~~~ig~~~~~~l~~~g----~~v~~~~r~~~~~---~~~~~~~~~~-------~~~~~~~~~Dv~~~~~~- 77 (122)
.++++|||++|++|.++++.|++.+ ++|++..|+.... +.+.+.+... ..++.++..|++++.--
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 4789999999999999999999876 6788888874332 2222222111 13688899999854210
Q ss_pred -HHHHHHHHHHcCCCCcEEEEcCCCCC
Q 033299 78 -QKLMETVCSEFDGKLNILVSSSAKVP 103 (122)
Q Consensus 78 -~~~~~~~~~~~~g~id~lv~~ag~~~ 103 (122)
.....++ . ..+|++||+|+...
T Consensus 1051 ~~~~~~~l---~-~~~d~iiH~Aa~~~ 1073 (1389)
T TIGR03443 1051 SDEKWSDL---T-NEVDVIIHNGALVH 1073 (1389)
T ss_pred CHHHHHHH---H-hcCCEEEECCcEec
Confidence 1112222 1 46899999999865
No 304
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=98.22 E-value=7.3e-06 Score=56.98 Aligned_cols=83 Identities=19% Similarity=0.208 Sum_probs=64.1
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
+..|-.+-+.||+|++|+.++.+|.+.|-+|++=.|..+-.-...+-+.. =+++.+...|+.|+++|.++++.
T Consensus 58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGd-LGQvl~~~fd~~DedSIr~vvk~------ 130 (391)
T KOG2865|consen 58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGD-LGQVLFMKFDLRDEDSIRAVVKH------ 130 (391)
T ss_pred cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeeccc-ccceeeeccCCCCHHHHHHHHHh------
Confidence 44556788999999999999999999999999988875532222222211 24799999999999999999843
Q ss_pred CCCcEEEEcCCC
Q 033299 90 GKLNILVSSSAK 101 (122)
Q Consensus 90 g~id~lv~~ag~ 101 (122)
-++|||..|-
T Consensus 131 --sNVVINLIGr 140 (391)
T KOG2865|consen 131 --SNVVINLIGR 140 (391)
T ss_pred --CcEEEEeecc
Confidence 4889998874
No 305
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=98.05 E-value=8.1e-05 Score=47.00 Aligned_cols=78 Identities=18% Similarity=0.250 Sum_probs=55.8
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCC-CeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFG-AIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
.++++.++|+|+ |++|.++++.|.+.| ..|.+++|+.+..++..+++.... +..+..+.++. .
T Consensus 16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~~----------~ 79 (155)
T cd01065 16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-----IAIAYLDLEEL----------L 79 (155)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-----cceeecchhhc----------c
Confidence 356789999998 899999999999986 789999999887776666553211 12233343321 2
Q ss_pred CCCCcEEEEcCCCCCc
Q 033299 89 DGKLNILVSSSAKVPF 104 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~ 104 (122)
...|+||++......
T Consensus 80 -~~~Dvvi~~~~~~~~ 94 (155)
T cd01065 80 -AEADLIINTTPVGMK 94 (155)
T ss_pred -ccCCEEEeCcCCCCC
Confidence 578999999877653
No 306
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=98.02 E-value=8.8e-05 Score=51.59 Aligned_cols=77 Identities=23% Similarity=0.379 Sum_probs=55.3
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCC-CeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFG-AIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
.+.++.++|+|+ ||+|+++++.|...| .+|+++.|+.++.+++.+.+.... .+. .++ + .. +..
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~~---~~~-~---~~-------~~~ 183 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KAE---LDL-E---LQ-------EEL 183 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-cee---ecc-c---ch-------hcc
Confidence 467889999997 999999999999999 789999999988877776664221 111 111 0 11 112
Q ss_pred CCCCcEEEEcCCCCC
Q 033299 89 DGKLNILVSSSAKVP 103 (122)
Q Consensus 89 ~g~id~lv~~ag~~~ 103 (122)
...|+|||......
T Consensus 184 -~~~DivInaTp~g~ 197 (278)
T PRK00258 184 -ADFDLIINATSAGM 197 (278)
T ss_pred -ccCCEEEECCcCCC
Confidence 46899999887654
No 307
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=98.00 E-value=5.5e-05 Score=49.42 Aligned_cols=72 Identities=18% Similarity=0.141 Sum_probs=58.4
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcE
Q 033299 15 TALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNI 94 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~ 94 (122)
.+-|.|++|-.|..+++....+|+.|.++.|+.++.... ..+.+++.|+.|++++.+.+ -..|+
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--------~~~~i~q~Difd~~~~a~~l--------~g~Da 65 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--------QGVTILQKDIFDLTSLASDL--------AGHDA 65 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--------ccceeecccccChhhhHhhh--------cCCce
Confidence 456789999999999999999999999999998876543 14667888999988776555 35688
Q ss_pred EEEcCCCC
Q 033299 95 LVSSSAKV 102 (122)
Q Consensus 95 lv~~ag~~ 102 (122)
||...|..
T Consensus 66 VIsA~~~~ 73 (211)
T COG2910 66 VISAFGAG 73 (211)
T ss_pred EEEeccCC
Confidence 88877766
No 308
>PRK06849 hypothetical protein; Provisional
Probab=97.99 E-value=0.00021 Score=51.81 Aligned_cols=83 Identities=10% Similarity=0.033 Sum_probs=56.5
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
+.+++||||++..+|..+++.|.+.|++|++++.+........... .....+...-.+.+...+.+.++.++. +
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~----d~~~~~p~p~~d~~~~~~~L~~i~~~~--~ 76 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV----DGFYTIPSPRWDPDAYIQALLSIVQRE--N 76 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh----hheEEeCCCCCCHHHHHHHHHHHHHHc--C
Confidence 3579999999999999999999999999999988764433221111 122222223345555555555666665 5
Q ss_pred CcEEEEcCC
Q 033299 92 LNILVSSSA 100 (122)
Q Consensus 92 id~lv~~ag 100 (122)
+|++|....
T Consensus 77 id~vIP~~e 85 (389)
T PRK06849 77 IDLLIPTCE 85 (389)
T ss_pred CCEEEECCh
Confidence 899998776
No 309
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.99 E-value=0.00014 Score=50.42 Aligned_cols=76 Identities=14% Similarity=0.257 Sum_probs=55.4
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCC
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDG 90 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g 90 (122)
..+|.++|+|+ ||+|++++..|...|++|.+++|+.++.+++.+.+...+ .......+ + . .. .
T Consensus 115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~-~~~~~~~~--~------~------~~-~ 177 (270)
T TIGR00507 115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYG-EIQAFSMD--E------L------PL-H 177 (270)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcC-ceEEechh--h------h------cc-c
Confidence 45789999998 799999999999999999999999888877777665432 12222111 0 0 12 4
Q ss_pred CCcEEEEcCCCCC
Q 033299 91 KLNILVSSSAKVP 103 (122)
Q Consensus 91 ~id~lv~~ag~~~ 103 (122)
..|+|||+.+...
T Consensus 178 ~~DivInatp~gm 190 (270)
T TIGR00507 178 RVDLIINATSAGM 190 (270)
T ss_pred CccEEEECCCCCC
Confidence 6899999998853
No 310
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=97.95 E-value=9.6e-05 Score=48.53 Aligned_cols=82 Identities=23% Similarity=0.270 Sum_probs=49.9
Q ss_pred cCCCEEEEecC----------------CCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCH
Q 033299 11 LKGMTALVTGG----------------TRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIR 74 (122)
Q Consensus 11 ~~~~~~litG~----------------~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 74 (122)
+.||.+|||+| ||-.|.++++.+...|+.|+++..... ... ...+. ..++.+.
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~--------p~~~~--~i~v~sa 69 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP--------PPGVK--VIRVESA 69 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-------------TTEE--EEE-SSH
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc--------cccce--EEEecch
Confidence 46889999987 367899999999999999998887632 111 11233 3345565
Q ss_pred HHHHHHHHHHHHHcCCCCcEEEEcCCCCCcchh
Q 033299 75 AERQKLMETVCSEFDGKLNILVSSSAKVPFELL 107 (122)
Q Consensus 75 ~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~ 107 (122)
+.+.+.+. +.+ ..-|++|++|++....+.
T Consensus 70 ~em~~~~~---~~~-~~~Di~I~aAAVsDf~p~ 98 (185)
T PF04127_consen 70 EEMLEAVK---ELL-PSADIIIMAAAVSDFRPE 98 (185)
T ss_dssp HHHHHHHH---HHG-GGGSEEEE-SB--SEEES
T ss_pred hhhhhhhc---ccc-CcceeEEEecchhheeeh
Confidence 55544444 444 456999999999987664
No 311
>COG4982 3-oxoacyl-[acyl-carrier protein]
Probab=97.93 E-value=0.00025 Score=54.04 Aligned_cols=97 Identities=22% Similarity=0.164 Sum_probs=69.2
Q ss_pred cccCCCEEEEecCC-CchHHHHHHHHHHCCCeEEEeecChh-HHHHHHHHH-Hhc---CCeEEEEeecCCCHHHHHHHHH
Q 033299 9 WSLKGMTALVTGGT-RGIGHAIVEELTAFGAIVHTCSRNET-ELNERIQEW-KSK---GLKVSGSACDLKIRAERQKLME 82 (122)
Q Consensus 9 ~~~~~~~~litG~~-~~ig~~~~~~l~~~g~~v~~~~r~~~-~~~~~~~~~-~~~---~~~~~~~~~Dv~~~~~~~~~~~ 82 (122)
.....+.+||||++ ++||.+++.+|+..|+.|+++..+.+ +..+..+.+ ..+ +..+.++.++..++..++.+++
T Consensus 392 ~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIe 471 (866)
T COG4982 392 GTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIE 471 (866)
T ss_pred CCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHH
Confidence 34567899999987 67999999999999999988765532 333333333 222 4557788899999999999999
Q ss_pred HHHHHcC-------------CCCcEEEEcCCCCCcc
Q 033299 83 TVCSEFD-------------GKLNILVSSSAKVPFE 105 (122)
Q Consensus 83 ~~~~~~~-------------g~id~lv~~ag~~~~~ 105 (122)
.+..+.. -.++.+|-.|+.-...
T Consensus 472 wIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G 507 (866)
T COG4982 472 WIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSG 507 (866)
T ss_pred HhccccccccCCcceecccccCcceeeecccCCccC
Confidence 9866531 0256677666655433
No 312
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=97.90 E-value=3.1e-05 Score=62.57 Aligned_cols=101 Identities=19% Similarity=0.300 Sum_probs=78.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCe-EEEeecChhHHHH---HHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAI-VHTCSRNETELNE---RIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~-v~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
-.|.++|+|+-||.|.+++.+|..+|++ +++++|+-=+... .+..|+..+-++.+-..|++..+....++++.. .
T Consensus 1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~-k 1845 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESN-K 1845 (2376)
T ss_pred ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhh-h
Confidence 3578999999999999999999999975 7888887443322 345566667777777789988888888887754 4
Q ss_pred cCCCCcEEEEcCCCCCcchhhcccccc
Q 033299 88 FDGKLNILVSSSAKVPFELLISEKLKI 114 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~~~~~~~~~~~~ 114 (122)
+ +++-.++|.|.+..+..+++.+.+.
T Consensus 1846 l-~~vGGiFnLA~VLRD~LiEnQt~kn 1871 (2376)
T KOG1202|consen 1846 L-GPVGGIFNLAAVLRDGLIENQTPKN 1871 (2376)
T ss_pred c-ccccchhhHHHHHHhhhhcccChhH
Confidence 5 7899999999999877776655443
No 313
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=97.80 E-value=2.3e-05 Score=54.37 Aligned_cols=99 Identities=15% Similarity=0.161 Sum_probs=67.8
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCC--CeEEEeecC--hhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFG--AIVHTCSRN--ETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g--~~v~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
+.++++|||++|.||...+..+...- ++.+.++.- ...+ ..+++.. ...+..++..|+.+...+.-++.+
T Consensus 5 ~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~-~~l~~~~-n~p~ykfv~~di~~~~~~~~~~~~---- 78 (331)
T KOG0747|consen 5 KEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNL-KNLEPVR-NSPNYKFVEGDIADADLVLYLFET---- 78 (331)
T ss_pred ccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeeccccccc-chhhhhc-cCCCceEeeccccchHHHHhhhcc----
Confidence 34899999999999999999998753 455444321 0111 1222221 245799999999999988888765
Q ss_pred cCCCCcEEEEcCCCCCcchhhccccccCCCC
Q 033299 88 FDGKLNILVSSSAKVPFELLISEKLKIQPEN 118 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~n 118 (122)
.++|.|+|.|+-.........+......|
T Consensus 79 --~~id~vihfaa~t~vd~s~~~~~~~~~nn 107 (331)
T KOG0747|consen 79 --EEIDTVIHFAAQTHVDRSFGDSFEFTKNN 107 (331)
T ss_pred --CchhhhhhhHhhhhhhhhcCchHHHhcCC
Confidence 68999999999887655544444443333
No 314
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.69 E-value=0.001 Score=46.54 Aligned_cols=50 Identities=14% Similarity=0.205 Sum_probs=42.8
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecChhHHHHHHHHHHhc
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRNETELNERIQEWKSK 60 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~ 60 (122)
...++.++|.|+ ||.|++++..|...|. +|.+++|+.++.+.+.+.+...
T Consensus 124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~ 174 (284)
T PRK12549 124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNAR 174 (284)
T ss_pred CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhh
Confidence 456789999998 8899999999999996 7999999999988888777543
No 315
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=97.69 E-value=0.00072 Score=47.21 Aligned_cols=79 Identities=23% Similarity=0.255 Sum_probs=54.7
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
+.++.++|.|+ ||.+++++..|...|. +|.++.|+.++.+++.+.+.... .+.. +...+.... ..
T Consensus 123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~-~~~~----~~~~~~~~~-------~~- 188 (282)
T TIGR01809 123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVG-VITR----LEGDSGGLA-------IE- 188 (282)
T ss_pred cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcC-ccee----ccchhhhhh-------cc-
Confidence 56889999987 9999999999999996 69999999988888777654321 1111 111111111 12
Q ss_pred CCCcEEEEcCCCCC
Q 033299 90 GKLNILVSSSAKVP 103 (122)
Q Consensus 90 g~id~lv~~ag~~~ 103 (122)
...|+|||+..+..
T Consensus 189 ~~~DiVInaTp~g~ 202 (282)
T TIGR01809 189 KAAEVLVSTVPADV 202 (282)
T ss_pred cCCCEEEECCCCCC
Confidence 46899999887754
No 316
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.68 E-value=0.00059 Score=50.11 Aligned_cols=77 Identities=13% Similarity=0.245 Sum_probs=56.0
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
..+.++.++|.|+ |++|..+++.|...|. +++++.|+.++.+.+.+++.. . .+...+.....
T Consensus 177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~----~-----~~~~~~~l~~~------- 239 (414)
T PRK13940 177 DNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN----A-----SAHYLSELPQL------- 239 (414)
T ss_pred cCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC----C-----eEecHHHHHHH-------
Confidence 3578899999998 9999999999999995 699999998887776665421 1 11122222222
Q ss_pred cCCCCcEEEEcCCCCC
Q 033299 88 FDGKLNILVSSSAKVP 103 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~ 103 (122)
+ ...|+||++.+...
T Consensus 240 l-~~aDiVI~aT~a~~ 254 (414)
T PRK13940 240 I-KKADIIIAAVNVLE 254 (414)
T ss_pred h-ccCCEEEECcCCCC
Confidence 3 57899999998754
No 317
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.68 E-value=0.00013 Score=48.50 Aligned_cols=47 Identities=28% Similarity=0.263 Sum_probs=40.3
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQE 56 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 56 (122)
.+++||++.|.|. |.+|..+++.|.+.|++|++++++.+..+...+.
T Consensus 24 ~~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~ 70 (200)
T cd01075 24 DSLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAEL 70 (200)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence 4688999999999 5899999999999999999999988766665544
No 318
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=97.64 E-value=0.00019 Score=53.09 Aligned_cols=93 Identities=25% Similarity=0.220 Sum_probs=59.3
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCC---CeEEEeecChh--HHH---------HHHHHHHhc----CCeEEEEeecC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFG---AIVHTCSRNET--ELN---------ERIQEWKSK----GLKVSGSACDL 71 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g---~~v~~~~r~~~--~~~---------~~~~~~~~~----~~~~~~~~~Dv 71 (122)
-+++|+++||||+|++|.-++++|+... .++++.-|... ..+ .+.+.+.+. -.++..+..|+
T Consensus 9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi 88 (467)
T KOG1221|consen 9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI 88 (467)
T ss_pred HhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence 3679999999999999999999999754 35777766421 111 222233222 14677888888
Q ss_pred CCHHH-HH-HHHHHHHHHcCCCCcEEEEcCCCCCcch
Q 033299 72 KIRAE-RQ-KLMETVCSEFDGKLNILVSSSAKVPFEL 106 (122)
Q Consensus 72 ~~~~~-~~-~~~~~~~~~~~g~id~lv~~ag~~~~~~ 106 (122)
++++- ++ .-.+.+ . ..++++||+|+-.....
T Consensus 89 ~~~~LGis~~D~~~l---~-~eV~ivih~AAtvrFde 121 (467)
T KOG1221|consen 89 SEPDLGISESDLRTL---A-DEVNIVIHSAATVRFDE 121 (467)
T ss_pred cCcccCCChHHHHHH---H-hcCCEEEEeeeeeccch
Confidence 76542 11 111111 1 46899999999876543
No 319
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=97.64 E-value=0.0013 Score=45.91 Aligned_cols=80 Identities=23% Similarity=0.334 Sum_probs=56.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
.++.++|+|+++++|.++++.+...|++|+++.++.++.+.+ . ..+.. ...|..+.+....+..... . +.
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~---~~~~~---~~~~~~~~~~~~~~~~~~~-~--~~ 235 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-K---ELGAD---YVIDYRKEDFVREVRELTG-K--RG 235 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-H---HcCCC---eEEecCChHHHHHHHHHhC-C--CC
Confidence 467899999999999999999999999999998887665433 2 22221 1235566555555544321 1 36
Q ss_pred CcEEEEcCCC
Q 033299 92 LNILVSSSAK 101 (122)
Q Consensus 92 id~lv~~ag~ 101 (122)
+|++++++|.
T Consensus 236 ~d~~i~~~g~ 245 (342)
T cd08266 236 VDVVVEHVGA 245 (342)
T ss_pred CcEEEECCcH
Confidence 8999999875
No 320
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=97.63 E-value=0.00085 Score=45.38 Aligned_cols=74 Identities=16% Similarity=0.252 Sum_probs=55.0
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHH-HHHHHHHcCCCCc
Q 033299 15 TALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKL-METVCSEFDGKLN 93 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~-~~~~~~~~~g~id 93 (122)
.++|.|+ |-+|..+++.|.+.|++|++++++++...+....- .....+.+|.++++.+.++ + ...|
T Consensus 2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~----~~~~~v~gd~t~~~~L~~agi--------~~aD 68 (225)
T COG0569 2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADE----LDTHVVIGDATDEDVLEEAGI--------DDAD 68 (225)
T ss_pred EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhh----cceEEEEecCCCHHHHHhcCC--------CcCC
Confidence 5667776 88999999999999999999999998776643311 2477888899987765554 2 2467
Q ss_pred EEEEcCCC
Q 033299 94 ILVSSSAK 101 (122)
Q Consensus 94 ~lv~~ag~ 101 (122)
++|...|-
T Consensus 69 ~vva~t~~ 76 (225)
T COG0569 69 AVVAATGN 76 (225)
T ss_pred EEEEeeCC
Confidence 77666554
No 321
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=97.63 E-value=0.00021 Score=49.05 Aligned_cols=91 Identities=24% Similarity=0.224 Sum_probs=65.7
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHH-HHHHHH----hc-CCeEEEEeecCCCHHHHHHHHHHHHH
Q 033299 13 GMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNE-RIQEWK----SK-GLKVSGSACDLKIRAERQKLMETVCS 86 (122)
Q Consensus 13 ~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~-~~~~~~----~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~ 86 (122)
.|.+||||-+|--|..++.-|+.+|+.|..+-|..+.++. .++.+= .+ +......-.|++|..++..++..+
T Consensus 28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i-- 105 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI-- 105 (376)
T ss_pred ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc--
Confidence 3589999999999999999999999999876655443322 222221 11 345677789999999999999875
Q ss_pred HcCCCCcEEEEcCCCCCcchhhc
Q 033299 87 EFDGKLNILVSSSAKVPFELLIS 109 (122)
Q Consensus 87 ~~~g~id~lv~~ag~~~~~~~~~ 109 (122)
.++-+.|.|+-.+.+...+
T Consensus 106 ----kPtEiYnLaAQSHVkvSFd 124 (376)
T KOG1372|consen 106 ----KPTEVYNLAAQSHVKVSFD 124 (376)
T ss_pred ----CchhhhhhhhhcceEEEee
Confidence 4577777777766554433
No 322
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=97.60 E-value=0.00056 Score=43.77 Aligned_cols=44 Identities=23% Similarity=0.267 Sum_probs=39.5
Q ss_pred CccccccccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeec
Q 033299 1 MSESREQRWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSR 45 (122)
Q Consensus 1 m~~~~~~~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r 45 (122)
|+.+-|-+..++|+.++|.|| |.+|...++.|++.|++|.+++.
T Consensus 1 ~~~~~P~~l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp 44 (157)
T PRK06719 1 MYNMYPLMFNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP 44 (157)
T ss_pred CCcccceEEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence 777788889999999999998 89999999999999999888753
No 323
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=97.59 E-value=0.00028 Score=53.34 Aligned_cols=47 Identities=26% Similarity=0.263 Sum_probs=41.0
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHH
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEW 57 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 57 (122)
.+++|.++|+|+ ||+|++++..|.+.|++|+++.|+.++.+.+.+++
T Consensus 376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l 422 (529)
T PLN02520 376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV 422 (529)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence 467899999999 79999999999999999999999988777766554
No 324
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=97.56 E-value=0.00037 Score=49.45 Aligned_cols=77 Identities=12% Similarity=0.139 Sum_probs=60.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCc
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLN 93 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id 93 (122)
.-++|-|++|.-|.-++++|+.+|.+.++..||..++..+.+++- .+.-.+.+.+ ++.+.+.. .+.+
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG---~~~~~~p~~~--p~~~~~~~--------~~~~ 73 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLG---PEAAVFPLGV--PAALEAMA--------SRTQ 73 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcC---ccccccCCCC--HHHHHHHH--------hcce
Confidence 368899999999999999999999888999999999888777663 3444444444 55555555 5789
Q ss_pred EEEEcCCCCC
Q 033299 94 ILVSSSAKVP 103 (122)
Q Consensus 94 ~lv~~ag~~~ 103 (122)
+|+|++|-+.
T Consensus 74 VVlncvGPyt 83 (382)
T COG3268 74 VVLNCVGPYT 83 (382)
T ss_pred EEEecccccc
Confidence 9999999764
No 325
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=97.56 E-value=0.0017 Score=45.48 Aligned_cols=76 Identities=25% Similarity=0.327 Sum_probs=50.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
.+.+++|+|+++++|.++++.+...|.+|+.+.++.+..+.. .+ .+.... .+. +.+.+. ..+. ..
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~~~~~~---~~~---~~~~~~----~~~~-~~ 226 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-KE---LGADYV---IDG---SKFSED----VKKL-GG 226 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HH---cCCcEE---Eec---HHHHHH----HHhc-cC
Confidence 367899999999999999999999999999888877654433 22 222111 121 112222 2233 46
Q ss_pred CcEEEEcCCCC
Q 033299 92 LNILVSSSAKV 102 (122)
Q Consensus 92 id~lv~~ag~~ 102 (122)
+|++++++|..
T Consensus 227 ~d~v~~~~g~~ 237 (332)
T cd08259 227 ADVVIELVGSP 237 (332)
T ss_pred CCEEEECCChH
Confidence 89999988753
No 326
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=97.54 E-value=0.0011 Score=47.24 Aligned_cols=79 Identities=23% Similarity=0.362 Sum_probs=49.5
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCC-C
Q 033299 13 GMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDG-K 91 (122)
Q Consensus 13 ~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g-~ 91 (122)
++++||+||+||+|...+......|+.++++..+.++.+ ...+ .+.... .|..+.+ +.+++.+..++ .
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~---lGAd~v---i~y~~~~----~~~~v~~~t~g~g 211 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKE---LGADHV---INYREED----FVEQVRELTGGKG 211 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHh---cCCCEE---EcCCccc----HHHHHHHHcCCCC
Confidence 789999999999999999888888877666666655544 3333 332211 1233322 22232222223 5
Q ss_pred CcEEEEcCCCC
Q 033299 92 LNILVSSSAKV 102 (122)
Q Consensus 92 id~lv~~ag~~ 102 (122)
+|+++...|..
T Consensus 212 vDvv~D~vG~~ 222 (326)
T COG0604 212 VDVVLDTVGGD 222 (326)
T ss_pred ceEEEECCCHH
Confidence 89999888854
No 327
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=97.54 E-value=0.0026 Score=44.48 Aligned_cols=81 Identities=11% Similarity=0.120 Sum_probs=54.6
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
..+|.++|.|+ ||-+++++..|.+.|. ++.++.|+.++.+++.+.+............+ ........
T Consensus 125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~---~~~~~~~~-------- 192 (283)
T PRK14027 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD---ARGIEDVI-------- 192 (283)
T ss_pred cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecC---HhHHHHHH--------
Confidence 56789999998 8999999999999985 68999999988888877764321111111122 11111111
Q ss_pred CCCcEEEEcCCCCC
Q 033299 90 GKLNILVSSSAKVP 103 (122)
Q Consensus 90 g~id~lv~~ag~~~ 103 (122)
...|+|||..-+.-
T Consensus 193 ~~~divINaTp~Gm 206 (283)
T PRK14027 193 AAADGVVNATPMGM 206 (283)
T ss_pred hhcCEEEEcCCCCC
Confidence 35799999876653
No 328
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=97.50 E-value=0.0019 Score=44.66 Aligned_cols=80 Identities=21% Similarity=0.362 Sum_probs=52.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
.+++++|+|+++++|..+++.+...|++|+++.++.+..+.. .++ +.. ...+..+.+....+.+ .... +.
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---g~~---~~~~~~~~~~~~~~~~-~~~~--~~ 208 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL---GAD---VAINYRTEDFAEEVKE-ATGG--RG 208 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc---CCC---EEEeCCchhHHHHHHH-HhCC--CC
Confidence 567999999999999999999999999999998887655433 222 211 1233333333333332 2211 35
Q ss_pred CcEEEEcCCC
Q 033299 92 LNILVSSSAK 101 (122)
Q Consensus 92 id~lv~~ag~ 101 (122)
+|++|+++|.
T Consensus 209 ~d~vi~~~g~ 218 (323)
T cd05276 209 VDVILDMVGG 218 (323)
T ss_pred eEEEEECCch
Confidence 8999998774
No 329
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=97.49 E-value=0.0028 Score=45.42 Aligned_cols=36 Identities=22% Similarity=0.394 Sum_probs=31.5
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRN 46 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~ 46 (122)
+++++.++|.|+ ||+|..+++.|+..|. ++.+++++
T Consensus 21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D 57 (338)
T PRK12475 21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRD 57 (338)
T ss_pred hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 567889999997 8899999999999995 78888875
No 330
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=97.46 E-value=0.0015 Score=45.20 Aligned_cols=80 Identities=19% Similarity=0.315 Sum_probs=54.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
.+++++|+|+++++|.++++.+...|.+|+++.++.++.+.. .+ .+.. ..+|..+.+....+.+.. .. ..
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~---~~~~~~~~~~~~~~~~~~-~~--~~ 213 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV-RQ---AGAD---AVFNYRAEDLADRILAAT-AG--QG 213 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH---cCCC---EEEeCCCcCHHHHHHHHc-CC--Cc
Confidence 478999999999999999999999999999998887655443 22 2221 123444544444443322 11 35
Q ss_pred CcEEEEcCCC
Q 033299 92 LNILVSSSAK 101 (122)
Q Consensus 92 id~lv~~ag~ 101 (122)
+|++++++|.
T Consensus 214 ~d~vi~~~~~ 223 (325)
T cd08253 214 VDVIIEVLAN 223 (325)
T ss_pred eEEEEECCch
Confidence 9999998765
No 331
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=97.45 E-value=0.0007 Score=46.69 Aligned_cols=75 Identities=19% Similarity=0.171 Sum_probs=53.3
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCcE
Q 033299 15 TALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNI 94 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id~ 94 (122)
.++|+||++- |+.+++.|.+.|++|+.+.++........ ..+ ...+..+.-+.+++.+++.+ .++|+
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~----~~g--~~~v~~g~l~~~~l~~~l~~------~~i~~ 68 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP----IHQ--ALTVHTGALDPQELREFLKR------HSIDI 68 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc----ccC--CceEEECCCCHHHHHHHHHh------cCCCE
Confidence 6899999987 99999999999999999888765332221 111 22345666677776666654 47899
Q ss_pred EEEcCCCC
Q 033299 95 LVSSSAKV 102 (122)
Q Consensus 95 lv~~ag~~ 102 (122)
||+.+.-+
T Consensus 69 VIDAtHPf 76 (256)
T TIGR00715 69 LVDATHPF 76 (256)
T ss_pred EEEcCCHH
Confidence 99877543
No 332
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.44 E-value=0.0028 Score=45.99 Aligned_cols=76 Identities=16% Similarity=0.191 Sum_probs=52.4
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCC
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDG 90 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g 90 (122)
+.++.++|.|+ |.+|...++.+...|++|.+++|+.++.+.....+ +.. +..+..+.+.+.+.+ .
T Consensus 165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~---g~~---v~~~~~~~~~l~~~l--------~ 229 (370)
T TIGR00518 165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF---GGR---IHTRYSNAYEIEDAV--------K 229 (370)
T ss_pred CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc---Cce---eEeccCCHHHHHHHH--------c
Confidence 45567888888 89999999999999999999999877655443322 111 223445555444333 4
Q ss_pred CCcEEEEcCCC
Q 033299 91 KLNILVSSSAK 101 (122)
Q Consensus 91 ~id~lv~~ag~ 101 (122)
..|++|+.+++
T Consensus 230 ~aDvVI~a~~~ 240 (370)
T TIGR00518 230 RADLLIGAVLI 240 (370)
T ss_pred cCCEEEEcccc
Confidence 57999998755
No 333
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.42 E-value=0.0024 Score=44.64 Aligned_cols=81 Identities=19% Similarity=0.232 Sum_probs=57.7
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
...++.++|.|+ ||-+++++..|++.|. ++.++.|+.++.+++.+.+...+..+ ...+..+.+..
T Consensus 123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~--~~~~~~~~~~~----------- 188 (283)
T COG0169 123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAV--EAAALADLEGL----------- 188 (283)
T ss_pred ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccc--ccccccccccc-----------
Confidence 446789999998 8999999999999995 79999999999998888877554311 11222222210
Q ss_pred CCCCcEEEEcCCCCCcc
Q 033299 89 DGKLNILVSSSAKVPFE 105 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~ 105 (122)
...|++||...+.-..
T Consensus 189 -~~~dliINaTp~Gm~~ 204 (283)
T COG0169 189 -EEADLLINATPVGMAG 204 (283)
T ss_pred -cccCEEEECCCCCCCC
Confidence 1369999988776443
No 334
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=97.41 E-value=0.0018 Score=45.82 Aligned_cols=43 Identities=16% Similarity=0.239 Sum_probs=35.8
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERI 54 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~ 54 (122)
.|.+++|+|++|++|..++......|++|+.+.++.++.+.+.
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~ 193 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLK 193 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 4689999999999999999877888999998888876655443
No 335
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.41 E-value=0.00029 Score=50.13 Aligned_cols=79 Identities=14% Similarity=0.129 Sum_probs=47.1
Q ss_pred EEEEecCCCchHHHHHHHHHHCC-------CeEEEeecChhH--HHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHH
Q 033299 15 TALVTGGTRGIGHAIVEELTAFG-------AIVHTCSRNETE--LNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVC 85 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~~g-------~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~ 85 (122)
.++|||++|.+|.+++..|+..+ ..+++++++... +.....++... ......|+....+..
T Consensus 4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~---~~~~~~~~~~~~~~~------- 73 (325)
T cd01336 4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC---AFPLLKSVVATTDPE------- 73 (325)
T ss_pred EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc---cccccCCceecCCHH-------
Confidence 58999999999999999998844 479999986431 22111111100 001111332222222
Q ss_pred HHcCCCCcEEEEcCCCCCc
Q 033299 86 SEFDGKLNILVSSSAKVPF 104 (122)
Q Consensus 86 ~~~~g~id~lv~~ag~~~~ 104 (122)
+.+ ...|+||+.||....
T Consensus 74 ~~l-~~aDiVI~tAG~~~~ 91 (325)
T cd01336 74 EAF-KDVDVAILVGAMPRK 91 (325)
T ss_pred HHh-CCCCEEEEeCCcCCC
Confidence 223 468999999998654
No 336
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.39 E-value=0.0049 Score=40.99 Aligned_cols=37 Identities=19% Similarity=0.291 Sum_probs=31.6
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecC
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRN 46 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~ 46 (122)
.++.++.++|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus 17 ~kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 17 QRLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred HHhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCC
Confidence 3577889999996 8999999999999995 78888765
No 337
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.37 E-value=0.0024 Score=44.74 Aligned_cols=42 Identities=26% Similarity=0.461 Sum_probs=37.0
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELN 51 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~ 51 (122)
..+.+++++|.|. |++|..+++.|...|++|.++.|+.++..
T Consensus 147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~ 188 (287)
T TIGR02853 147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLA 188 (287)
T ss_pred CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4678999999999 77999999999999999999999876543
No 338
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=97.37 E-value=0.0033 Score=44.50 Aligned_cols=42 Identities=14% Similarity=0.081 Sum_probs=34.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-eEEEeecChhHHHHHHH
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRNETELNERIQ 55 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~~~~~~~~~~ 55 (122)
.+++|+|++|++|...+......|+ +|+.+.++.++.+.+.+
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~ 198 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKS 198 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 7999999999999999887777898 79998888766554433
No 339
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.35 E-value=0.0025 Score=46.95 Aligned_cols=57 Identities=14% Similarity=0.144 Sum_probs=41.2
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHH
Q 033299 15 TALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAER 77 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~ 77 (122)
.++|.|+ |.+|..+++.|.++|+.|++++++++..+...+.. .+.++..|.++...+
T Consensus 2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~-----~~~~~~gd~~~~~~l 58 (453)
T PRK09496 2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRL-----DVRTVVGNGSSPDVL 58 (453)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhc-----CEEEEEeCCCCHHHH
Confidence 5788887 99999999999999999999999887665443211 244455565554433
No 340
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=97.34 E-value=0.0037 Score=43.99 Aligned_cols=79 Identities=11% Similarity=0.175 Sum_probs=49.8
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
.+.+++|+|++|++|...+......|++|+.+.++.++.+.. .+ .+.... .|..+.+...+.+... .++.
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~---lGa~~v---i~~~~~~~~~~~~~~~---~~~g 207 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KK---LGFDVA---FNYKTVKSLEETLKKA---SPDG 207 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH---cCCCEE---EeccccccHHHHHHHh---CCCC
Confidence 467999999999999999887778899999888887665433 22 232211 1222222233333322 1135
Q ss_pred CcEEEEcCC
Q 033299 92 LNILVSSSA 100 (122)
Q Consensus 92 id~lv~~ag 100 (122)
+|+++.+.|
T Consensus 208 vdvv~d~~G 216 (325)
T TIGR02825 208 YDCYFDNVG 216 (325)
T ss_pred eEEEEECCC
Confidence 788888766
No 341
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=97.31 E-value=0.0032 Score=46.18 Aligned_cols=76 Identities=18% Similarity=0.250 Sum_probs=57.9
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCC-CeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFG-AIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSE 87 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 87 (122)
.+++++.+++.|+ |-+|.-.+++|..+| ..|+++.|+.++..++..++. .++...+.+...+
T Consensus 174 ~~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~----------~~~~~l~el~~~l------ 236 (414)
T COG0373 174 GSLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG----------AEAVALEELLEAL------ 236 (414)
T ss_pred cccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC----------CeeecHHHHHHhh------
Confidence 3478999999998 889999999999999 579999999999888887764 2222333333333
Q ss_pred cCCCCcEEEEcCCCCC
Q 033299 88 FDGKLNILVSSSAKVP 103 (122)
Q Consensus 88 ~~g~id~lv~~ag~~~ 103 (122)
...|+||.+.|...
T Consensus 237 --~~~DvVissTsa~~ 250 (414)
T COG0373 237 --AEADVVISSTSAPH 250 (414)
T ss_pred --hhCCEEEEecCCCc
Confidence 56899999887654
No 342
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=97.30 E-value=0.0077 Score=42.28 Aligned_cols=48 Identities=21% Similarity=0.219 Sum_probs=37.7
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecCh---hHHHHHHHHHH
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRNE---TELNERIQEWK 58 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~~---~~~~~~~~~~~ 58 (122)
.+.+|.++|.|+ ||-+++++..|...|. +|.++.|+. ++.+.+.+.+.
T Consensus 121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~ 172 (288)
T PRK12749 121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN 172 (288)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence 467889999998 6669999999999885 799999984 46666655553
No 343
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=97.29 E-value=0.0027 Score=45.38 Aligned_cols=42 Identities=14% Similarity=0.252 Sum_probs=35.0
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNER 53 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 53 (122)
.|.+++|+|++|++|...+......|++|+.+.++.++.+.+
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~ 199 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLL 199 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence 468999999999999999887778899998888887665443
No 344
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=97.28 E-value=0.0026 Score=51.51 Aligned_cols=79 Identities=14% Similarity=0.152 Sum_probs=60.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCC-Ce-------------EEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFG-AI-------------VHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAER 77 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g-~~-------------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~ 77 (122)
..|.++|.|+ |.+|...++.|.+.. +. |++++++.+..+++.+.+. ++..+..|++|.+++
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~----~~~~v~lDv~D~e~L 642 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIE----NAEAVQLDVSDSESL 642 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcC----CCceEEeecCCHHHH
Confidence 3568999997 999999999998753 33 8888888877766555432 466889999999887
Q ss_pred HHHHHHHHHHcCCCCcEEEEcCCCCC
Q 033299 78 QKLMETVCSEFDGKLNILVSSSAKVP 103 (122)
Q Consensus 78 ~~~~~~~~~~~~g~id~lv~~ag~~~ 103 (122)
.+++ .++|+||+......
T Consensus 643 ~~~v--------~~~DaVIsalP~~~ 660 (1042)
T PLN02819 643 LKYV--------SQVDVVISLLPASC 660 (1042)
T ss_pred HHhh--------cCCCEEEECCCchh
Confidence 7776 45899999887643
No 345
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.24 E-value=0.0043 Score=45.76 Aligned_cols=47 Identities=23% Similarity=0.407 Sum_probs=39.1
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecChhHHHHHHHHH
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRNETELNERIQEW 57 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~ 57 (122)
.+.++.++|.|+ |.+|..+++.|...|. +|+++.|+.++......++
T Consensus 179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~ 226 (423)
T PRK00045 179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF 226 (423)
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence 367889999987 9999999999999896 7999999987766655543
No 346
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=97.20 E-value=0.0051 Score=44.26 Aligned_cols=81 Identities=22% Similarity=0.342 Sum_probs=50.9
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCC
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDG 90 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g 90 (122)
-.|+.+||.||+||.|.+.++-....+...+++.++.+.. ++.+++ +.. ...|..+++ +.+++.+..++
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~-~l~k~l---GAd---~vvdy~~~~----~~e~~kk~~~~ 224 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKL-ELVKKL---GAD---EVVDYKDEN----VVELIKKYTGK 224 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchH-HHHHHc---CCc---EeecCCCHH----HHHHHHhhcCC
Confidence 3578999999999999999987777774444444444433 333333 221 234666633 33333332126
Q ss_pred CCcEEEEcCCCC
Q 033299 91 KLNILVSSSAKV 102 (122)
Q Consensus 91 ~id~lv~~ag~~ 102 (122)
++|+|+.+.|-.
T Consensus 225 ~~DvVlD~vg~~ 236 (347)
T KOG1198|consen 225 GVDVVLDCVGGS 236 (347)
T ss_pred CccEEEECCCCC
Confidence 899999999984
No 347
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=97.18 E-value=0.0078 Score=42.18 Aligned_cols=42 Identities=19% Similarity=0.304 Sum_probs=35.0
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNER 53 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 53 (122)
.|.+++|.|++|++|..++......|.+|+.+.++.++.+.+
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l 184 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWL 184 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 467999999999999999888888899999888887655433
No 348
>PTZ00325 malate dehydrogenase; Provisional
Probab=97.17 E-value=0.0018 Score=46.07 Aligned_cols=81 Identities=10% Similarity=0.016 Sum_probs=50.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCC--CeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFG--AIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
+.+.+.|+|++|.+|..++..|+..+ ..++++++.. ......++.....+ ....+.+|+..+.+.+
T Consensus 7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~~~~--~~v~~~td~~~~~~~l-------- 74 (321)
T PTZ00325 7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHIDTP--AKVTGYADGELWEKAL-------- 74 (321)
T ss_pred CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--CcccccchhhcCcC--ceEEEecCCCchHHHh--------
Confidence 34589999999999999999998655 5799999832 22222233221111 2334555544322333
Q ss_pred CCCcEEEEcCCCCCc
Q 033299 90 GKLNILVSSSAKVPF 104 (122)
Q Consensus 90 g~id~lv~~ag~~~~ 104 (122)
...|+||+.+|....
T Consensus 75 ~gaDvVVitaG~~~~ 89 (321)
T PTZ00325 75 RGADLVLICAGVPRK 89 (321)
T ss_pred CCCCEEEECCCCCCC
Confidence 468999999998543
No 349
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=97.17 E-value=0.0053 Score=41.47 Aligned_cols=78 Identities=23% Similarity=0.271 Sum_probs=51.3
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
.+.+++|+|+++ +|..+++.+...|.+|+++.++.++.+.. .++ +... ..|..+.+....+. .... +.
T Consensus 134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~~~~~---~~~~-~~ 201 (271)
T cd05188 134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KEL---GADH---VIDYKEEDLEEELR---LTGG-GG 201 (271)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHh---CCce---eccCCcCCHHHHHH---HhcC-CC
Confidence 567999999988 99999998888899999998887654433 222 2111 12333333333333 1122 46
Q ss_pred CcEEEEcCCC
Q 033299 92 LNILVSSSAK 101 (122)
Q Consensus 92 id~lv~~ag~ 101 (122)
+|++|+++|.
T Consensus 202 ~d~vi~~~~~ 211 (271)
T cd05188 202 ADVVIDAVGG 211 (271)
T ss_pred CCEEEECCCC
Confidence 9999999886
No 350
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=97.16 E-value=0.0036 Score=37.50 Aligned_cols=58 Identities=22% Similarity=0.209 Sum_probs=41.9
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHH
Q 033299 16 ALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKL 80 (122)
Q Consensus 16 ~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~ 80 (122)
++|.|. |.+|..+++.|.+.+.+|++++++++..+... ..+ +.++..|.++++.++++
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~----~~~--~~~i~gd~~~~~~l~~a 58 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELR----EEG--VEVIYGDATDPEVLERA 58 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH----HTT--SEEEES-TTSHHHHHHT
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH----hcc--cccccccchhhhHHhhc
Confidence 467777 68999999999997779999999987655443 222 55777888887765544
No 351
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=97.16 E-value=0.0057 Score=45.72 Aligned_cols=82 Identities=21% Similarity=0.231 Sum_probs=56.4
Q ss_pred ccCCCEEEEecC----------------CCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCC
Q 033299 10 SLKGMTALVTGG----------------TRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKI 73 (122)
Q Consensus 10 ~~~~~~~litG~----------------~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 73 (122)
.+.||.+|||+| ||-.|.++++.+...|++|.+++-... +. ....+..+. +..
T Consensus 253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~--------~~-~p~~v~~i~--V~t 321 (475)
T PRK13982 253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD--------LA-DPQGVKVIH--VES 321 (475)
T ss_pred ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC--------CC-CCCCceEEE--ecC
Confidence 489999999998 356899999999999999998874321 00 112233333 333
Q ss_pred HHHHHHHHHHHHHHcCCCCcEEEEcCCCCCcchh
Q 033299 74 RAERQKLMETVCSEFDGKLNILVSSSAKVPFELL 107 (122)
Q Consensus 74 ~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~ 107 (122)
..++.+.+.+.+ . .|++|..|++..+.+.
T Consensus 322 ---a~eM~~av~~~~-~-~Di~I~aAAVaDyrp~ 350 (475)
T PRK13982 322 ---ARQMLAAVEAAL-P-ADIAIFAAAVADWRVA 350 (475)
T ss_pred ---HHHHHHHHHhhC-C-CCEEEEeccccceeec
Confidence 445555555555 3 7999999999876653
No 352
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.15 E-value=0.0023 Score=41.46 Aligned_cols=44 Identities=25% Similarity=0.397 Sum_probs=37.2
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNE 52 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~ 52 (122)
.++.++.++|.|++...|..+++.|.++|++|.++.|+.+.+.+
T Consensus 40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~ 83 (168)
T cd01080 40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLKE 83 (168)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHHH
Confidence 46899999999996667999999999999999999998654443
No 353
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=97.14 E-value=0.013 Score=42.06 Aligned_cols=36 Identities=28% Similarity=0.404 Sum_probs=31.7
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRN 46 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~ 46 (122)
++++..++|.|+ ||+|..++..|+..|. ++.+++.+
T Consensus 21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 567788999998 9999999999999996 78888875
No 354
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.13 E-value=0.0061 Score=44.90 Aligned_cols=47 Identities=26% Similarity=0.378 Sum_probs=39.2
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCC-CeEEEeecChhHHHHHHHHH
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFG-AIVHTCSRNETELNERIQEW 57 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~ 57 (122)
.+.++.++|.|+ |.+|..+++.|...| .+|+++.|+.++..+....+
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~ 224 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL 224 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence 467899999997 999999999999999 68999999987766555443
No 355
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=97.12 E-value=0.0054 Score=42.51 Aligned_cols=80 Identities=20% Similarity=0.331 Sum_probs=51.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
.+++++|+|+++++|..+.+.+...|++|+++.++.+..+.. .+ .+.+. ..+....+....+... ... ..
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~~---~~~~~~~~~~~~~~~~-~~~--~~ 208 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EA---LGADI---AINYREEDFVEVVKAE-TGG--KG 208 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH---cCCcE---EEecCchhHHHHHHHH-cCC--CC
Confidence 467999999999999999998889999999988887654422 22 22211 1233333332332222 111 25
Q ss_pred CcEEEEcCCC
Q 033299 92 LNILVSSSAK 101 (122)
Q Consensus 92 id~lv~~ag~ 101 (122)
+|++|+++|.
T Consensus 209 ~d~~i~~~~~ 218 (325)
T TIGR02824 209 VDVILDIVGG 218 (325)
T ss_pred eEEEEECCch
Confidence 8999998764
No 356
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=97.11 E-value=0.012 Score=39.72 Aligned_cols=34 Identities=32% Similarity=0.448 Sum_probs=28.8
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEee
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCS 44 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~ 44 (122)
++.+++++|.|+ ||+|.++++.|+..|. ++.+++
T Consensus 18 ~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD 52 (228)
T cd00757 18 KLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVD 52 (228)
T ss_pred HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEc
Confidence 567889999996 9999999999999985 566664
No 357
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.10 E-value=0.0086 Score=43.51 Aligned_cols=36 Identities=22% Similarity=0.327 Sum_probs=30.6
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRN 46 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~ 46 (122)
+++++.++|.|+ ||+|..+++.|+..|. ++.+++++
T Consensus 132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 467788888877 8999999999999995 68888775
No 358
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=97.09 E-value=0.0076 Score=41.80 Aligned_cols=80 Identities=14% Similarity=0.165 Sum_probs=51.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
.+++++|+|+++++|..++..+...|++|+.+.++.++.+.+ .++ +... + .+....+....+.+. ... ..
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---g~~~-~--~~~~~~~~~~~~~~~-~~~--~~ 213 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LAL---GAAH-V--IVTDEEDLVAEVLRI-TGG--KG 213 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc---CCCE-E--EecCCccHHHHHHHH-hCC--CC
Confidence 467899999999999999999999999999998887655443 222 2111 1 122222222233222 111 25
Q ss_pred CcEEEEcCCC
Q 033299 92 LNILVSSSAK 101 (122)
Q Consensus 92 id~lv~~ag~ 101 (122)
+|++++++|.
T Consensus 214 ~d~vi~~~~~ 223 (328)
T cd08268 214 VDVVFDPVGG 223 (328)
T ss_pred ceEEEECCch
Confidence 8999998764
No 359
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.06 E-value=0.01 Score=43.87 Aligned_cols=82 Identities=20% Similarity=0.099 Sum_probs=52.9
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCC
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDG 90 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g 90 (122)
+.+|.++|+|. |++|.+.++.|.++|+.|.+.+...... ...++......+.+..... +. ..+ .
T Consensus 3 ~~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~--~~~~l~~~~~gi~~~~g~~-~~----~~~--------~ 66 (445)
T PRK04308 3 FQNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPE--RVAQIGKMFDGLVFYTGRL-KD----ALD--------N 66 (445)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCch--hHHHHhhccCCcEEEeCCC-CH----HHH--------h
Confidence 56889999998 5899999999999999999988764421 1223332111233332221 11 111 3
Q ss_pred CCcEEEEcCCCCCcchhh
Q 033299 91 KLNILVSSSAKVPFELLI 108 (122)
Q Consensus 91 ~id~lv~~ag~~~~~~~~ 108 (122)
..|.||.+.|+.+..+..
T Consensus 67 ~~d~vv~spgi~~~~p~~ 84 (445)
T PRK04308 67 GFDILALSPGISERQPDI 84 (445)
T ss_pred CCCEEEECCCCCCCCHHH
Confidence 579999999998766543
No 360
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=97.06 E-value=0.01 Score=41.59 Aligned_cols=42 Identities=17% Similarity=0.204 Sum_probs=35.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNER 53 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 53 (122)
.+.+++|.|+++++|..++..+...|.+|+.+.++.++.+..
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~ 186 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWL 186 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 467999999999999999998888999999888887655443
No 361
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=97.04 E-value=0.0051 Score=45.06 Aligned_cols=46 Identities=33% Similarity=0.375 Sum_probs=40.3
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHH
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQ 55 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 55 (122)
..+-..++++|++|.+|+.+++.|.++|+.|.+..|+.++..+...
T Consensus 76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~ 121 (411)
T KOG1203|consen 76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG 121 (411)
T ss_pred CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc
Confidence 3455789999999999999999999999999999999887776654
No 362
>PLN00203 glutamyl-tRNA reductase
Probab=97.04 E-value=0.0088 Score=45.29 Aligned_cols=77 Identities=17% Similarity=0.244 Sum_probs=53.9
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
+.++.++|.|+ |.+|..+++.|...|. +|+++.|+.++.+.+..++. +..+.+ ...++....+
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~--g~~i~~-----~~~~dl~~al-------- 327 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP--DVEIIY-----KPLDEMLACA-------- 327 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC--CCceEe-----ecHhhHHHHH--------
Confidence 67899999999 9999999999999996 69999999888777665543 111111 1222222222
Q ss_pred CCCcEEEEcCCCCC
Q 033299 90 GKLNILVSSSAKVP 103 (122)
Q Consensus 90 g~id~lv~~ag~~~ 103 (122)
...|+||.+.+...
T Consensus 328 ~~aDVVIsAT~s~~ 341 (519)
T PLN00203 328 AEADVVFTSTSSET 341 (519)
T ss_pred hcCCEEEEccCCCC
Confidence 46799998876544
No 363
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.04 E-value=0.015 Score=43.44 Aligned_cols=81 Identities=17% Similarity=0.145 Sum_probs=54.2
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChh-HHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNET-ELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
.+.++.++|.|+ |++|.++++.|.+.|+.|.+++++.. ......+.+...+ +.+...+-.. ..
T Consensus 13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~g--v~~~~~~~~~-------------~~ 76 (480)
T PRK01438 13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALG--ATVRLGPGPT-------------LP 76 (480)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcC--CEEEECCCcc-------------cc
Confidence 456889999997 88999999999999999999986543 3333344455444 2232222111 01
Q ss_pred CCCCcEEEEcCCCCCcchh
Q 033299 89 DGKLNILVSSSAKVPFELL 107 (122)
Q Consensus 89 ~g~id~lv~~ag~~~~~~~ 107 (122)
...|.||.+.|+.+..+.
T Consensus 77 -~~~D~Vv~s~Gi~~~~~~ 94 (480)
T PRK01438 77 -EDTDLVVTSPGWRPDAPL 94 (480)
T ss_pred -CCCCEEEECCCcCCCCHH
Confidence 357999999999766553
No 364
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=97.01 E-value=0.02 Score=39.28 Aligned_cols=35 Identities=31% Similarity=0.365 Sum_probs=29.5
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeec
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSR 45 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r 45 (122)
++.++.++|.|+ ||+|..+++.|+..|. ++.+++.
T Consensus 29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~ 64 (245)
T PRK05690 29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDF 64 (245)
T ss_pred HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence 467789999998 9999999999999984 6767654
No 365
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.00 E-value=0.0082 Score=42.51 Aligned_cols=75 Identities=23% Similarity=0.303 Sum_probs=51.8
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHCC-CeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAFG-AIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
+.+++++|.|+ |.+|..+++.|...| .+|++++|+.++..+...++. .. +.+.+.....+
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g---~~-------~~~~~~~~~~l-------- 236 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELG---GN-------AVPLDELLELL-------- 236 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcC---Ce-------EEeHHHHHHHH--------
Confidence 57889999998 999999999998876 579999999887766655542 11 11222222222
Q ss_pred CCCcEEEEcCCCCCc
Q 033299 90 GKLNILVSSSAKVPF 104 (122)
Q Consensus 90 g~id~lv~~ag~~~~ 104 (122)
...|++|...+....
T Consensus 237 ~~aDvVi~at~~~~~ 251 (311)
T cd05213 237 NEADVVISATGAPHY 251 (311)
T ss_pred hcCCEEEECCCCCch
Confidence 356888888876544
No 366
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=97.00 E-value=0.011 Score=39.73 Aligned_cols=51 Identities=27% Similarity=0.239 Sum_probs=40.8
Q ss_pred ccccccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecCh-hHHHHHHH
Q 033299 4 SREQRWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNE-TELNERIQ 55 (122)
Q Consensus 4 ~~~~~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~-~~~~~~~~ 55 (122)
+.+-++.+.+|.++|.|+ |..|..-++.|++.|++|++++... +++....+
T Consensus 3 ~lPl~~~l~~k~VlvvGg-G~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~ 54 (210)
T COG1648 3 YLPLFLDLEGKKVLVVGG-GSVALRKARLLLKAGADVTVVSPEFEPELKALIE 54 (210)
T ss_pred ccceEEEcCCCEEEEECC-CHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHH
Confidence 456678999999999998 8899999999999999988887654 44444433
No 367
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=96.96 E-value=0.0039 Score=46.67 Aligned_cols=46 Identities=20% Similarity=0.275 Sum_probs=39.1
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHH
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQE 56 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 56 (122)
.+.++.++|+|+ ||+|++++..|...|++|.+++|+.++.++..+.
T Consensus 329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~ 374 (477)
T PRK09310 329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR 374 (477)
T ss_pred CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 467889999996 7999999999999999999999988776665543
No 368
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.95 E-value=0.017 Score=38.61 Aligned_cols=40 Identities=23% Similarity=0.233 Sum_probs=35.0
Q ss_pred cccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecCh
Q 033299 7 QRWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNE 47 (122)
Q Consensus 7 ~~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~ 47 (122)
-+..+.|+.++|.|+ |.+|..-++.|++.|++|++++...
T Consensus 3 ~~l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~ 42 (205)
T TIGR01470 3 VFANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEEL 42 (205)
T ss_pred eEEEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 456789999999998 8899999999999999999887654
No 369
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=96.92 E-value=0.025 Score=42.77 Aligned_cols=85 Identities=15% Similarity=0.150 Sum_probs=54.5
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCH-------------HHH
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIR-------------AER 77 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-------------~~~ 77 (122)
..+.+++|+|+ |.+|...+..+...|+.|++++++.++.+... + .+.+ ++..|..+. +..
T Consensus 163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae-s---lGA~--~v~i~~~e~~~~~~gya~~~s~~~~ 235 (509)
T PRK09424 163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE-S---MGAE--FLELDFEEEGGSGDGYAKVMSEEFI 235 (509)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-H---cCCe--EEEeccccccccccchhhhcchhHH
Confidence 34778999998 99999999999999999999999987665332 2 3333 222232211 111
Q ss_pred HHHHHHHHHHcCCCCcEEEEcCCCCC
Q 033299 78 QKLMETVCSEFDGKLNILVSSSAKVP 103 (122)
Q Consensus 78 ~~~~~~~~~~~~g~id~lv~~ag~~~ 103 (122)
+...+.+.+.. +..|++|.++|+..
T Consensus 236 ~~~~~~~~~~~-~gaDVVIetag~pg 260 (509)
T PRK09424 236 KAEMALFAEQA-KEVDIIITTALIPG 260 (509)
T ss_pred HHHHHHHHhcc-CCCCEEEECCCCCc
Confidence 22222222323 45899999999843
No 370
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=96.91 E-value=0.024 Score=38.77 Aligned_cols=35 Identities=29% Similarity=0.330 Sum_probs=29.2
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeec
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSR 45 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r 45 (122)
++++..++|.|+ ||+|..++..|+..|. ++.+++.
T Consensus 21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~ 56 (240)
T TIGR02355 21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDF 56 (240)
T ss_pred HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeC
Confidence 467788999987 8999999999999884 6777665
No 371
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=96.90 E-value=0.026 Score=34.93 Aligned_cols=79 Identities=11% Similarity=0.273 Sum_probs=52.7
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecC-------------------hhHHHHHHHHHHhc--CCeEEEEeec
Q 033299 13 GMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRN-------------------ETELNERIQEWKSK--GLKVSGSACD 70 (122)
Q Consensus 13 ~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~~~~~--~~~~~~~~~D 70 (122)
.++++|.|+ |++|..+++.|+..|. ++.+++.. ..+.+...+.+.+. ..++..+..+
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 467888887 9999999999999985 68787652 23445555555544 3457777777
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcEEEEcCCC
Q 033299 71 LKIRAERQKLMETVCSEFDGKLNILVSSSAK 101 (122)
Q Consensus 71 v~~~~~~~~~~~~~~~~~~g~id~lv~~ag~ 101 (122)
+ +.+...+++ ...|++|.+..-
T Consensus 81 ~-~~~~~~~~~--------~~~d~vi~~~d~ 102 (135)
T PF00899_consen 81 I-DEENIEELL--------KDYDIVIDCVDS 102 (135)
T ss_dssp C-SHHHHHHHH--------HTSSEEEEESSS
T ss_pred c-ccccccccc--------cCCCEEEEecCC
Confidence 7 334445554 256888887554
No 372
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=96.89 E-value=0.015 Score=40.89 Aligned_cols=40 Identities=30% Similarity=0.437 Sum_probs=35.2
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHH
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETEL 50 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~ 50 (122)
.+.++.++|.|. |.+|..+++.|...|++|.+++|+.++.
T Consensus 149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~ 188 (296)
T PRK08306 149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHL 188 (296)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 457899999998 7899999999999999999999987653
No 373
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.89 E-value=0.0071 Score=38.74 Aligned_cols=87 Identities=11% Similarity=0.074 Sum_probs=58.0
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHH-------hcCCeEEEEeecCCCHHHHHHHHHH--HH
Q 033299 15 TALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWK-------SKGLKVSGSACDLKIRAERQKLMET--VC 85 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~-------~~~~~~~~~~~Dv~~~~~~~~~~~~--~~ 85 (122)
.+-+.|. |-+|..++++|.+.|++|.+.+|+.++.+++.+.-. +.-.+...+..=+.+.+.+++++.. +.
T Consensus 3 ~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i~ 81 (163)
T PF03446_consen 3 KIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENIL 81 (163)
T ss_dssp EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTHG
T ss_pred EEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHHh
Confidence 4556776 899999999999999999999999887776653210 0011234566667888889999888 77
Q ss_pred HHcCCCCcEEEEcCCCCC
Q 033299 86 SEFDGKLNILVSSSAKVP 103 (122)
Q Consensus 86 ~~~~g~id~lv~~ag~~~ 103 (122)
.+. .+=.++|+.+...+
T Consensus 82 ~~l-~~g~iiid~sT~~p 98 (163)
T PF03446_consen 82 AGL-RPGKIIIDMSTISP 98 (163)
T ss_dssp GGS--TTEEEEE-SS--H
T ss_pred hcc-ccceEEEecCCcch
Confidence 766 45567777666554
No 374
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=96.88 E-value=0.028 Score=37.68 Aligned_cols=36 Identities=22% Similarity=0.321 Sum_probs=30.5
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRN 46 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~ 46 (122)
++.+..++|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus 25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 567788999997 9999999999999995 57777764
No 375
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.88 E-value=0.0084 Score=42.00 Aligned_cols=40 Identities=25% Similarity=0.347 Sum_probs=34.9
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChh
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNET 48 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~ 48 (122)
..++||.++|.|+++-.|+.++..|...|+.|.++.|...
T Consensus 155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~ 194 (283)
T PRK14192 155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ 194 (283)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch
Confidence 3678999999999777999999999999999999988543
No 376
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=96.84 E-value=0.016 Score=40.10 Aligned_cols=41 Identities=37% Similarity=0.467 Sum_probs=34.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNE 52 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~ 52 (122)
.+.+++|+|+++++|..++..+...|..|+.+.++.++.+.
T Consensus 139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~ 179 (323)
T cd08241 139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLAL 179 (323)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHH
Confidence 46799999999999999999998999999988887665443
No 377
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.83 E-value=0.026 Score=40.75 Aligned_cols=35 Identities=23% Similarity=0.291 Sum_probs=30.0
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeec
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSR 45 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r 45 (122)
++++.+++|.|+ ||+|..+++.|+..|. ++.+++.
T Consensus 25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~ 60 (355)
T PRK05597 25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDD 60 (355)
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeC
Confidence 567889999998 9999999999999984 6777765
No 378
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.82 E-value=0.0034 Score=41.82 Aligned_cols=42 Identities=17% Similarity=0.179 Sum_probs=36.7
Q ss_pred cccccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecCh
Q 033299 5 REQRWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNE 47 (122)
Q Consensus 5 ~~~~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~ 47 (122)
-|-+..+++|.++|.|+ |.+|...++.|.+.|++|+++++..
T Consensus 2 ~Pl~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~ 43 (202)
T PRK06718 2 MPLMIDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL 43 (202)
T ss_pred cceEEEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 35567899999999998 9999999999999999998887653
No 379
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=96.81 E-value=0.0068 Score=41.29 Aligned_cols=62 Identities=31% Similarity=0.308 Sum_probs=47.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC---eEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCC
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFGA---IVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDG 90 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g~---~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g 90 (122)
+.+++||++|-.|.++.+.+.++|. +.++... -.+|+++.+..+++|++ .
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s---------------------kd~DLt~~a~t~~lF~~------e 54 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS---------------------KDADLTNLADTRALFES------E 54 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc---------------------ccccccchHHHHHHHhc------c
Confidence 6799999999999999999999874 2222111 14689999999999877 3
Q ss_pred CCcEEEEcCCCC
Q 033299 91 KLNILVSSSAKV 102 (122)
Q Consensus 91 ~id~lv~~ag~~ 102 (122)
++..||+.|+..
T Consensus 55 kPthVIhlAAmV 66 (315)
T KOG1431|consen 55 KPTHVIHLAAMV 66 (315)
T ss_pred CCceeeehHhhh
Confidence 667788877755
No 380
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=96.81 E-value=0.017 Score=40.34 Aligned_cols=80 Identities=13% Similarity=0.123 Sum_probs=50.5
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
.+.+++|.|+++++|.++++.....|+.++.+.++.++.+.+.+ + +... ++ +..+.+.... +...... ..
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~---g~~~-~~--~~~~~~~~~~-i~~~~~~--~~ 208 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-L---GIGP-VV--STEQPGWQDK-VREAAGG--AP 208 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-c---CCCE-EE--cCCCchHHHH-HHHHhCC--CC
Confidence 46789999999999999999888899999888887766544322 2 2211 11 2222222222 2222211 25
Q ss_pred CcEEEEcCCC
Q 033299 92 LNILVSSSAK 101 (122)
Q Consensus 92 id~lv~~ag~ 101 (122)
+|+++.++|.
T Consensus 209 ~d~v~d~~g~ 218 (324)
T cd08292 209 ISVALDSVGG 218 (324)
T ss_pred CcEEEECCCC
Confidence 8999988774
No 381
>PRK04148 hypothetical protein; Provisional
Probab=96.76 E-value=0.04 Score=34.39 Aligned_cols=54 Identities=17% Similarity=0.065 Sum_probs=40.8
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKI 73 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 73 (122)
+++.++..|.+ .|.+++..|.+.|+.|++++.++...+...+ . ...++..|+.+
T Consensus 16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~----~--~~~~v~dDlf~ 69 (134)
T PRK04148 16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKK----L--GLNAFVDDLFN 69 (134)
T ss_pred cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH----h--CCeEEECcCCC
Confidence 45779999986 6777888899999999999999886554422 1 25677778766
No 382
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=96.75 E-value=0.0088 Score=40.14 Aligned_cols=42 Identities=24% Similarity=0.287 Sum_probs=35.8
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHH
Q 033299 15 TALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQE 56 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 56 (122)
.+.|.|++|.+|.++++.|.+.|++|.+.+|+.++.+.....
T Consensus 2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~ 43 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK 43 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence 478899889999999999999999999999998776665443
No 383
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=96.75 E-value=0.013 Score=43.28 Aligned_cols=60 Identities=18% Similarity=0.112 Sum_probs=44.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAE 76 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 76 (122)
..+.++|.|+ |.+|..+++.|.+.|++|++++++++..+...+.. ..+.++..|.++.+.
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~----~~~~~i~gd~~~~~~ 289 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL----PNTLVLHGDGTDQEL 289 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC----CCCeEEECCCCCHHH
Confidence 4578999999 99999999999999999999999987665543322 123445556655544
No 384
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=96.74 E-value=0.021 Score=37.02 Aligned_cols=82 Identities=21% Similarity=0.176 Sum_probs=57.0
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCC-C
Q 033299 13 GMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDG-K 91 (122)
Q Consensus 13 ~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g-~ 91 (122)
..+++|-|+-|.+|.+++..+..++|-|.-++..+.+-. ..-..+..|-+=.+.-+.+++++-+.+++ +
T Consensus 3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A----------d~sI~V~~~~swtEQe~~v~~~vg~sL~gek 72 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA----------DSSILVDGNKSWTEQEQSVLEQVGSSLQGEK 72 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc----------cceEEecCCcchhHHHHHHHHHHHHhhcccc
Confidence 457889999999999999999999998887776543200 01223334444445556777777766533 7
Q ss_pred CcEEEEcCCCCCc
Q 033299 92 LNILVSSSAKVPF 104 (122)
Q Consensus 92 id~lv~~ag~~~~ 104 (122)
+|.+++-||....
T Consensus 73 vDav~CVAGGWAG 85 (236)
T KOG4022|consen 73 VDAVFCVAGGWAG 85 (236)
T ss_pred cceEEEeeccccC
Confidence 9999999987643
No 385
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=96.73 E-value=0.025 Score=39.44 Aligned_cols=80 Identities=21% Similarity=0.272 Sum_probs=51.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
.+.+++|+|+++++|..++..+...|.+|+.+.++.++.+.. +++ +... ..+..+.+....+... .. +..
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~~~~~~~-~~--~~~ 211 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL---GADV---AVDYTRPDWPDQVREA-LG--GGG 211 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc---CCCE---EEecCCccHHHHHHHH-cC--CCC
Confidence 367899999999999999998888999999998887665433 332 2211 1233333333333222 11 125
Q ss_pred CcEEEEcCCC
Q 033299 92 LNILVSSSAK 101 (122)
Q Consensus 92 id~lv~~ag~ 101 (122)
+|+++++.|-
T Consensus 212 ~d~vl~~~g~ 221 (324)
T cd08244 212 VTVVLDGVGG 221 (324)
T ss_pred ceEEEECCCh
Confidence 8999998764
No 386
>PLN00106 malate dehydrogenase
Probab=96.73 E-value=0.0043 Score=44.23 Aligned_cols=79 Identities=9% Similarity=0.052 Sum_probs=49.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC--CeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFG--AIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
+.+.|+|++|.+|..++..|...+ ..+.+++.++. .....++....... ...++++.+++...+ ..
T Consensus 19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~--~g~a~Dl~~~~~~~--~i~~~~~~~d~~~~l--------~~ 86 (323)
T PLN00106 19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANT--PGVAADVSHINTPA--QVRGFLGDDQLGDAL--------KG 86 (323)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCC--CeeEchhhhCCcCc--eEEEEeCCCCHHHHc--------CC
Confidence 579999999999999999999766 37999998762 11122332211111 222333322223333 56
Q ss_pred CcEEEEcCCCCCc
Q 033299 92 LNILVSSSAKVPF 104 (122)
Q Consensus 92 id~lv~~ag~~~~ 104 (122)
.|++|+.||....
T Consensus 87 aDiVVitAG~~~~ 99 (323)
T PLN00106 87 ADLVIIPAGVPRK 99 (323)
T ss_pred CCEEEEeCCCCCC
Confidence 8999999998654
No 387
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=96.73 E-value=0.0087 Score=42.22 Aligned_cols=81 Identities=11% Similarity=0.133 Sum_probs=53.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
.|++++|++|+|..|.-...--.-.|++|+.+.-+.++..-+.+++.- . .-.|...+ ++.+.+.+ .....
T Consensus 150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGf---D---~~idyk~~-d~~~~L~~---a~P~G 219 (340)
T COG2130 150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGF---D---AGIDYKAE-DFAQALKE---ACPKG 219 (340)
T ss_pred CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCC---c---eeeecCcc-cHHHHHHH---HCCCC
Confidence 378999999999999766554445789999999888887766654421 1 11233333 23333333 33235
Q ss_pred CcEEEEcCCCC
Q 033299 92 LNILVSSSAKV 102 (122)
Q Consensus 92 id~lv~~ag~~ 102 (122)
||+.+-|.|--
T Consensus 220 IDvyfeNVGg~ 230 (340)
T COG2130 220 IDVYFENVGGE 230 (340)
T ss_pred eEEEEEcCCch
Confidence 99999999854
No 388
>PRK08223 hypothetical protein; Validated
Probab=96.70 E-value=0.023 Score=39.91 Aligned_cols=36 Identities=17% Similarity=0.223 Sum_probs=29.9
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeec
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSR 45 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r 45 (122)
.++++..++|.|+ ||+|..++..|+..|. ++.+++.
T Consensus 23 ~kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~ 59 (287)
T PRK08223 23 QRLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADF 59 (287)
T ss_pred HHHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeC
Confidence 3577889999988 8999999999999884 6777764
No 389
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=96.69 E-value=0.02 Score=41.02 Aligned_cols=40 Identities=35% Similarity=0.469 Sum_probs=34.6
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHH
Q 033299 13 GMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNER 53 (122)
Q Consensus 13 ~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 53 (122)
|+++.|+|.+ |+|...++.....|++|+++++++++.+..
T Consensus 167 G~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a 206 (339)
T COG1064 167 GKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELA 206 (339)
T ss_pred CCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHH
Confidence 7899999997 999888887777899999999999876544
No 390
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=96.65 E-value=0.047 Score=39.71 Aligned_cols=36 Identities=22% Similarity=0.435 Sum_probs=30.3
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRN 46 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~ 46 (122)
++++..++|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus 38 ~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 38 RLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred HhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 567788999988 8999999999999994 78787653
No 391
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=96.64 E-value=0.01 Score=37.26 Aligned_cols=44 Identities=27% Similarity=0.364 Sum_probs=37.8
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNE 52 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~ 52 (122)
..++||.++|.|.+.-.|..++..|.++|+.|..++++...+++
T Consensus 24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~ 67 (140)
T cd05212 24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS 67 (140)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence 46889999999999999999999999999999999865544433
No 392
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=96.63 E-value=0.029 Score=39.55 Aligned_cols=36 Identities=17% Similarity=0.332 Sum_probs=31.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecCh
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNE 47 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~ 47 (122)
.+++++|.|+++++|.++++.....|.+|+++.++.
T Consensus 146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~ 181 (341)
T cd08290 146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDR 181 (341)
T ss_pred CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCC
Confidence 467999999999999999998888999988777665
No 393
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=96.63 E-value=0.028 Score=39.31 Aligned_cols=41 Identities=27% Similarity=0.299 Sum_probs=34.9
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHH
Q 033299 13 GMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNER 53 (122)
Q Consensus 13 ~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 53 (122)
+++++|.|+++++|..++......|.+|+.+.++.++.+..
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~ 187 (326)
T cd08289 147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL 187 (326)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence 56999999999999999998888999999888887665443
No 394
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=96.63 E-value=0.031 Score=40.02 Aligned_cols=87 Identities=16% Similarity=0.195 Sum_probs=54.6
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHH---HHHh--cCCeEEEEeecCCCHHHHHHHHHHH
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQ---EWKS--KGLKVSGSACDLKIRAERQKLMETV 84 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~---~~~~--~~~~~~~~~~Dv~~~~~~~~~~~~~ 84 (122)
.+.|+++.|.|. |.||.++++.|...|++|+..+++......... ++.. ...++..+.+-.+.. +..-+-...
T Consensus 143 ~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~~-t~~li~~~~ 220 (330)
T PRK12480 143 PVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKE-SYHLFDKAM 220 (330)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcHH-HHHHHhHHH
Confidence 578899999987 889999999999999999999988654222111 1111 133566666665542 223333444
Q ss_pred HHHcCCCCcEEEEcCC
Q 033299 85 CSEFDGKLNILVSSSA 100 (122)
Q Consensus 85 ~~~~~g~id~lv~~ag 100 (122)
.+.. +.+.+|.|+|
T Consensus 221 l~~m--k~gavlIN~a 234 (330)
T PRK12480 221 FDHV--KKGAILVNAA 234 (330)
T ss_pred HhcC--CCCcEEEEcC
Confidence 4444 3355555555
No 395
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=96.62 E-value=0.039 Score=39.25 Aligned_cols=76 Identities=20% Similarity=0.267 Sum_probs=48.3
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDG 90 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g 90 (122)
.+++++|+|+ |++|...+..+...|+ +|+++++++++.+.. .+ .+.... .|..+. ++.++. +.. +
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~---lGa~~v---i~~~~~-~~~~~~----~~~-g 234 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-RE---MGADKL---VNPQND-DLDHYK----AEK-G 234 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HH---cCCcEE---ecCCcc-cHHHHh----ccC-C
Confidence 5789999986 9999999887777887 588888887765433 22 232221 233332 222222 222 4
Q ss_pred CCcEEEEcCCC
Q 033299 91 KLNILVSSSAK 101 (122)
Q Consensus 91 ~id~lv~~ag~ 101 (122)
.+|++|..+|.
T Consensus 235 ~~D~vid~~G~ 245 (343)
T PRK09880 235 YFDVSFEVSGH 245 (343)
T ss_pred CCCEEEECCCC
Confidence 58888888884
No 396
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.61 E-value=0.0029 Score=37.52 Aligned_cols=39 Identities=31% Similarity=0.288 Sum_probs=32.9
Q ss_pred ccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecCh
Q 033299 8 RWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNE 47 (122)
Q Consensus 8 ~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~ 47 (122)
++.++++.++|.|+ |.+|..-++.|++.|++|.+++...
T Consensus 2 ~l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~ 40 (103)
T PF13241_consen 2 FLDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI 40 (103)
T ss_dssp EE--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred EEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence 46789999999999 9999999999999999999998875
No 397
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=96.59 E-value=0.013 Score=36.21 Aligned_cols=92 Identities=14% Similarity=0.100 Sum_probs=55.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEe-ecChhHHHHHHHHHHhc--------CCeEEEEeecCCCHHHHHHHHHHH
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFGAIVHTC-SRNETELNERIQEWKSK--------GLKVSGSACDLKIRAERQKLMETV 84 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~--------~~~~~~~~~Dv~~~~~~~~~~~~~ 84 (122)
..+-|.|+ |-.|.++++.|.+.|+.|..+ +|+.+..+.....+... -.+...+.+-+.|. .+..+.+++
T Consensus 11 l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-aI~~va~~L 88 (127)
T PF10727_consen 11 LKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-AIAEVAEQL 88 (127)
T ss_dssp -EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-HHHHHHHHH
T ss_pred cEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-HHHHHHHHH
Confidence 46778888 889999999999999998765 46655544444433211 12344555666664 688888888
Q ss_pred HHH--cCCCCcEEEEcCCCCCcchhh
Q 033299 85 CSE--FDGKLNILVSSSAKVPFELLI 108 (122)
Q Consensus 85 ~~~--~~g~id~lv~~ag~~~~~~~~ 108 (122)
... + .+=.++||++|-.....+.
T Consensus 89 a~~~~~-~~g~iVvHtSGa~~~~vL~ 113 (127)
T PF10727_consen 89 AQYGAW-RPGQIVVHTSGALGSDVLA 113 (127)
T ss_dssp HCC--S--TT-EEEES-SS--GGGGH
T ss_pred HHhccC-CCCcEEEECCCCChHHhhh
Confidence 765 3 3446999999988765543
No 398
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.59 E-value=0.064 Score=39.85 Aligned_cols=39 Identities=26% Similarity=0.294 Sum_probs=33.6
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHH
Q 033299 15 TALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNER 53 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 53 (122)
.+.|.||.|.+|.++++.|...|++|.+++|+.+...+.
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~ 40 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEV 40 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHH
Confidence 578999999999999999999999999999987664433
No 399
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=96.58 E-value=0.026 Score=40.14 Aligned_cols=77 Identities=8% Similarity=0.044 Sum_probs=53.9
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHCCC--eEEEeecChhHHHHHHHHHHhcC---CeEEEEeecCCCHHHHHHHHHHHH
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAFGA--IVHTCSRNETELNERIQEWKSKG---LKVSGSACDLKIRAERQKLMETVC 85 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~~~~~~~~~~ 85 (122)
-.++.+.|+|+ |.+|..++..|+..+. .+.+++++++.+.....++.... .+.... . .+++
T Consensus 4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~~---------- 69 (315)
T PRK00066 4 KQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDYS---------- 69 (315)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCHH----------
Confidence 34568999998 9999999999998885 69999998887777766665321 122111 1 2211
Q ss_pred HHcCCCCcEEEEcCCCCC
Q 033299 86 SEFDGKLNILVSSSAKVP 103 (122)
Q Consensus 86 ~~~~g~id~lv~~ag~~~ 103 (122)
.+ ..-|++|..||...
T Consensus 70 -~~-~~adivIitag~~~ 85 (315)
T PRK00066 70 -DC-KDADLVVITAGAPQ 85 (315)
T ss_pred -Hh-CCCCEEEEecCCCC
Confidence 12 46799999999853
No 400
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=96.58 E-value=0.042 Score=36.45 Aligned_cols=35 Identities=23% Similarity=0.385 Sum_probs=28.8
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeec
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSR 45 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r 45 (122)
++++.+++|.|+ ||+|.++++.|+..|. ++.+++.
T Consensus 18 ~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~ 53 (197)
T cd01492 18 RLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDD 53 (197)
T ss_pred HHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEEC
Confidence 467788999986 6799999999999995 5777764
No 401
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=96.57 E-value=0.046 Score=33.47 Aligned_cols=79 Identities=15% Similarity=0.212 Sum_probs=55.0
Q ss_pred EEEEecCCCchHHHHHHHHHH-CCCeE-EEeecCh----------------------hHHHHHHHHHHhcCCeEEEEeec
Q 033299 15 TALVTGGTRGIGHAIVEELTA-FGAIV-HTCSRNE----------------------TELNERIQEWKSKGLKVSGSACD 70 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~-~g~~v-~~~~r~~----------------------~~~~~~~~~~~~~~~~~~~~~~D 70 (122)
.+.|.|++|-+|+.+++.+.+ .+.++ ..++++. ..+++...+ .=+..|
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~--------~DVvID 73 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE--------ADVVID 73 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH---------SEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc--------CCEEEE
Confidence 578999999999999999998 57774 4556665 222222222 125678
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcEEEEcCCCCCc
Q 033299 71 LKIRAERQKLMETVCSEFDGKLNILVSSSAKVPF 104 (122)
Q Consensus 71 v~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~ 104 (122)
.+.++.+...++...++ ++.+|+-..|+...
T Consensus 74 fT~p~~~~~~~~~~~~~---g~~~ViGTTG~~~~ 104 (124)
T PF01113_consen 74 FTNPDAVYDNLEYALKH---GVPLVIGTTGFSDE 104 (124)
T ss_dssp ES-HHHHHHHHHHHHHH---T-EEEEE-SSSHHH
T ss_pred cCChHHhHHHHHHHHhC---CCCEEEECCCCCHH
Confidence 89999999998888776 47889989988643
No 402
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=96.56 E-value=0.016 Score=40.73 Aligned_cols=85 Identities=18% Similarity=0.266 Sum_probs=63.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
+|-+++.-|++++.|.+....-...|++-+-+-|+.+..+++.+++...|....+-.-.+.+.+..+.. ..+ ++
T Consensus 160 ~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~-----~~~-~~ 233 (354)
T KOG0025|consen 160 KGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFK-----GDN-PR 233 (354)
T ss_pred CCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhh-----ccC-CC
Confidence 467899999999999998887777899988888999999999999988776555444455554432222 233 67
Q ss_pred CcEEEEcCCCC
Q 033299 92 LNILVSSSAKV 102 (122)
Q Consensus 92 id~lv~~ag~~ 102 (122)
+..-+|+.|.-
T Consensus 234 prLalNcVGGk 244 (354)
T KOG0025|consen 234 PRLALNCVGGK 244 (354)
T ss_pred ceEEEeccCch
Confidence 88889988854
No 403
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=96.55 E-value=0.051 Score=38.12 Aligned_cols=78 Identities=17% Similarity=0.184 Sum_probs=49.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
.+.+++|.|+++++|.+++......|.+|+.+.++.++...+ .+ .+.+. + .+..+.+ ....+.... ++.
T Consensus 139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~~-v--~~~~~~~-~~~~~~~~~---~~~ 207 (329)
T cd08250 139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KS---LGCDR-P--INYKTED-LGEVLKKEY---PKG 207 (329)
T ss_pred CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HH---cCCce-E--EeCCCcc-HHHHHHHhc---CCC
Confidence 467899999999999999888888899998888877654433 22 22211 1 2222222 222332221 135
Q ss_pred CcEEEEcCC
Q 033299 92 LNILVSSSA 100 (122)
Q Consensus 92 id~lv~~ag 100 (122)
+|++|++.|
T Consensus 208 vd~v~~~~g 216 (329)
T cd08250 208 VDVVYESVG 216 (329)
T ss_pred CeEEEECCc
Confidence 899999866
No 404
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=96.54 E-value=0.033 Score=38.38 Aligned_cols=41 Identities=27% Similarity=0.321 Sum_probs=34.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNE 52 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~ 52 (122)
.+.+++|.|+++++|..+++.....|..|+.+.++.++.+.
T Consensus 136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~ 176 (320)
T cd05286 136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAEL 176 (320)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence 46899999999999999999888899999888887765443
No 405
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=96.54 E-value=0.034 Score=39.80 Aligned_cols=90 Identities=17% Similarity=0.045 Sum_probs=54.7
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHH-------Hh--cCCeEEEEeecCCCHHHHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEW-------KS--KGLKVSGSACDLKIRAERQK 79 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~-------~~--~~~~~~~~~~Dv~~~~~~~~ 79 (122)
..++++++-|.|. |.+|.++++.|...|.+|++..+..++..+...+. .. ...++.++ =+.+.. ...
T Consensus 13 ~~L~gktIgIIG~-GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~eaa~~ADVVvL--aVPd~~-~~~ 88 (330)
T PRK05479 13 SLIKGKKVAIIGY-GSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVAEAAKWADVIMI--LLPDEV-QAE 88 (330)
T ss_pred hhhCCCEEEEEee-HHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHHHHHhcCCEEEE--cCCHHH-HHH
Confidence 4578899999987 78999999999999999887766543322222111 00 01223322 233333 366
Q ss_pred HH-HHHHHHcCCCCcEEEEcCCCCC
Q 033299 80 LM-ETVCSEFDGKLNILVSSSAKVP 103 (122)
Q Consensus 80 ~~-~~~~~~~~g~id~lv~~ag~~~ 103 (122)
++ +++...+ .+=.+|+..+|+..
T Consensus 89 V~~~~I~~~L-k~g~iL~~a~G~~i 112 (330)
T PRK05479 89 VYEEEIEPNL-KEGAALAFAHGFNI 112 (330)
T ss_pred HHHHHHHhcC-CCCCEEEECCCCCh
Confidence 66 5565555 33346788888763
No 406
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=96.53 E-value=0.043 Score=38.59 Aligned_cols=78 Identities=12% Similarity=0.099 Sum_probs=45.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCCCc
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLN 93 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~id 93 (122)
+.++++|++|++|...+......|.+|+++.++.++.+... + .+.... + |..+.+.... +.+.... ..+|
T Consensus 145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~-~---~g~~~~-i--~~~~~~~~~~-v~~~~~~--~~~d 214 (324)
T cd08291 145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK-K---IGAEYV-L--NSSDPDFLED-LKELIAK--LNAT 214 (324)
T ss_pred cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-H---cCCcEE-E--ECCCccHHHH-HHHHhCC--CCCc
Confidence 34455599999999998877778999998888876654432 2 232211 1 2222222222 2222211 2589
Q ss_pred EEEEcCCC
Q 033299 94 ILVSSSAK 101 (122)
Q Consensus 94 ~lv~~ag~ 101 (122)
++|++.|.
T Consensus 215 ~vid~~g~ 222 (324)
T cd08291 215 IFFDAVGG 222 (324)
T ss_pred EEEECCCc
Confidence 99998763
No 407
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=96.53 E-value=0.019 Score=40.53 Aligned_cols=73 Identities=12% Similarity=0.127 Sum_probs=50.9
Q ss_pred EEEEecCCCchHHHHHHHHHHCC--CeEEEeecChhHHHHHHHHHHhc----CCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 15 TALVTGGTRGIGHAIVEELTAFG--AIVHTCSRNETELNERIQEWKSK----GLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
.+.|.|+ |++|..++..|+..| .++++++++.+..+....++... ....... . .+++. +
T Consensus 2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~~~-----------l 66 (306)
T cd05291 2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDYSD-----------C 66 (306)
T ss_pred EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCHHH-----------h
Confidence 5778886 999999999999988 57999999988877777666432 1111111 1 22211 1
Q ss_pred CCCCcEEEEcCCCCC
Q 033299 89 DGKLNILVSSSAKVP 103 (122)
Q Consensus 89 ~g~id~lv~~ag~~~ 103 (122)
...|++|+.+|...
T Consensus 67 -~~aDIVIitag~~~ 80 (306)
T cd05291 67 -KDADIVVITAGAPQ 80 (306)
T ss_pred -CCCCEEEEccCCCC
Confidence 46899999999853
No 408
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=96.53 E-value=0.051 Score=34.06 Aligned_cols=74 Identities=12% Similarity=0.098 Sum_probs=52.6
Q ss_pred EEEEecCCCchHHHHHHHHHHCC--CeEEEeecChhHHHHHHHHHHhc---C-CeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 15 TALVTGGTRGIGHAIVEELTAFG--AIVHTCSRNETELNERIQEWKSK---G-LKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~---~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
.+.|+|++|.+|.+++..|...+ .++++++++++.++....++... . ....... .+++. +
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~-----------~ 67 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEA-----------L 67 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGG-----------G
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---ccccc-----------c
Confidence 57899999999999999999887 46999999987777666666432 1 1222222 23221 2
Q ss_pred CCCCcEEEEcCCCCC
Q 033299 89 DGKLNILVSSSAKVP 103 (122)
Q Consensus 89 ~g~id~lv~~ag~~~ 103 (122)
...|++|..+|...
T Consensus 68 -~~aDivvitag~~~ 81 (141)
T PF00056_consen 68 -KDADIVVITAGVPR 81 (141)
T ss_dssp -TTESEEEETTSTSS
T ss_pred -ccccEEEEeccccc
Confidence 46899999999864
No 409
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=96.53 E-value=0.049 Score=37.76 Aligned_cols=40 Identities=33% Similarity=0.476 Sum_probs=34.5
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELN 51 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~ 51 (122)
.+.+++|.|+++++|.++++.....|++|+.+.++.++.+
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 181 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAA 181 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 4679999999999999999988889999998888876543
No 410
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=96.52 E-value=0.033 Score=39.38 Aligned_cols=78 Identities=19% Similarity=0.198 Sum_probs=48.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCe-EEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAI-VHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDG 90 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g 90 (122)
.+.+++|+|+ |++|...+..+...|++ |++++++.++.+.. .++ +... ..|..+.+ .+++.+ .... .
T Consensus 163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~---ga~~---~i~~~~~~-~~~~~~-~~~~--~ 230 (339)
T cd08239 163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL---GADF---VINSGQDD-VQEIRE-LTSG--A 230 (339)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh---CCCE---EEcCCcch-HHHHHH-HhCC--C
Confidence 4789999986 89999999888888988 98888887665433 333 2211 12333333 333322 1111 2
Q ss_pred CCcEEEEcCCC
Q 033299 91 KLNILVSSSAK 101 (122)
Q Consensus 91 ~id~lv~~ag~ 101 (122)
.+|++|.+.|.
T Consensus 231 ~~d~vid~~g~ 241 (339)
T cd08239 231 GADVAIECSGN 241 (339)
T ss_pred CCCEEEECCCC
Confidence 58888888774
No 411
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.50 E-value=0.014 Score=41.70 Aligned_cols=75 Identities=17% Similarity=0.143 Sum_probs=46.7
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-------eEEEeecCh--hHHHHHHHHHHhcCCeEEEEeecCCCHHH--H--HHHH
Q 033299 15 TALVTGGTRGIGHAIVEELTAFGA-------IVHTCSRNE--TELNERIQEWKSKGLKVSGSACDLKIRAE--R--QKLM 81 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~--~--~~~~ 81 (122)
.+.|+|++|.+|..++..|+..+. .++++++++ +.+ .....|+.+... . ..+-
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~--------------~g~~~Dl~d~~~~~~~~~~i~ 67 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKAL--------------EGVVMELQDCAFPLLKGVVIT 67 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcc--------------ceeeeehhhhcccccCCcEEe
Confidence 578999999999999999987652 488888876 322 222333333210 0 0000
Q ss_pred HHHHHHcCCCCcEEEEcCCCCCc
Q 033299 82 ETVCSEFDGKLNILVSSSAKVPF 104 (122)
Q Consensus 82 ~~~~~~~~g~id~lv~~ag~~~~ 104 (122)
....+.+ ...|++|+.||....
T Consensus 68 ~~~~~~~-~~aDiVVitAG~~~~ 89 (323)
T cd00704 68 TDPEEAF-KDVDVAILVGAFPRK 89 (323)
T ss_pred cChHHHh-CCCCEEEEeCCCCCC
Confidence 1222334 568999999998643
No 412
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.48 E-value=0.086 Score=34.25 Aligned_cols=30 Identities=20% Similarity=0.292 Sum_probs=25.5
Q ss_pred EEEecCCCchHHHHHHHHHHCCC-eEEEeecC
Q 033299 16 ALVTGGTRGIGHAIVEELTAFGA-IVHTCSRN 46 (122)
Q Consensus 16 ~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~ 46 (122)
++|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus 2 VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D 32 (174)
T cd01487 2 VGIAGA-GGLGSNIAVLLARSGVGNLKLVDFD 32 (174)
T ss_pred EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 677886 9999999999999996 58888765
No 413
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=96.46 E-value=0.016 Score=44.15 Aligned_cols=57 Identities=18% Similarity=0.161 Sum_probs=41.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHH
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAER 77 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~ 77 (122)
..++|.|+ |.+|+.+++.|.++|+++++++.++++.++..+ . ....+..|.+|++..
T Consensus 418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~----~--g~~~i~GD~~~~~~L 474 (558)
T PRK10669 418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE----R--GIRAVLGNAANEEIM 474 (558)
T ss_pred CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----C--CCeEEEcCCCCHHHH
Confidence 35777777 889999999999999999999999876655432 1 244555666665443
No 414
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=96.44 E-value=0.08 Score=35.22 Aligned_cols=37 Identities=19% Similarity=0.238 Sum_probs=31.9
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecC
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRN 46 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~ 46 (122)
-++..+.++|.|+ ||+|..++..|+..|. ++++++.+
T Consensus 17 ~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 17 QKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4577889999998 8999999999999997 68888765
No 415
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=96.44 E-value=0.038 Score=38.52 Aligned_cols=41 Identities=12% Similarity=0.265 Sum_probs=34.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNE 52 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~ 52 (122)
.+.+++|.|+++++|.+++..+...|.+|+++.++.++.+.
T Consensus 138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~ 178 (323)
T cd05282 138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEE 178 (323)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHH
Confidence 46799999999999999999888999999888887765443
No 416
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=96.44 E-value=0.11 Score=39.47 Aligned_cols=82 Identities=20% Similarity=0.207 Sum_probs=54.0
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCC-------------CHHHHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLK-------------IRAERQ 78 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-------------~~~~~~ 78 (122)
.+.+++|.|+ |.+|...+..+...|+.|++++++.++.+.. +++ +. .++..|.. +.+..+
T Consensus 163 p~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a-~~l---Ga--~~v~v~~~e~g~~~~gYa~~~s~~~~~ 235 (511)
T TIGR00561 163 PPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV-QSM---GA--EFLELDFKEEGGSGDGYAKVMSEEFIA 235 (511)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc---CC--eEEeccccccccccccceeecCHHHHH
Confidence 4568999997 9999999999999999999999988764432 222 22 23333321 123333
Q ss_pred HHHHHHHHHcCCCCcEEEEcCCC
Q 033299 79 KLMETVCSEFDGKLNILVSSSAK 101 (122)
Q Consensus 79 ~~~~~~~~~~~g~id~lv~~ag~ 101 (122)
...+...++. ...|++|+.+-+
T Consensus 236 ~~~~~~~e~~-~~~DIVI~Tali 257 (511)
T TIGR00561 236 AEMELFAAQA-KEVDIIITTALI 257 (511)
T ss_pred HHHHHHHHHh-CCCCEEEECccc
Confidence 4444444445 579999999944
No 417
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=96.44 E-value=0.15 Score=35.95 Aligned_cols=84 Identities=11% Similarity=0.073 Sum_probs=54.5
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHH----------HHhcCCeEEEEeecCCCHHHHHHHHHHHH
Q 033299 16 ALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQE----------WKSKGLKVSGSACDLKIRAERQKLMETVC 85 (122)
Q Consensus 16 ~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~----------~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~ 85 (122)
+-+.|. |-+|..+++.|.+.|++|.+.+|+.++.+...+. +...-....++.+=+.+. .++.+++++.
T Consensus 3 Ig~IGl-G~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~~vp~~-~~~~v~~~l~ 80 (298)
T TIGR00872 3 LGLIGL-GRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWVMVPHG-IVDAVLEELA 80 (298)
T ss_pred EEEEcc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEEEcCch-HHHHHHHHHH
Confidence 556675 8899999999999999999999998776655431 110000112222234444 6788888877
Q ss_pred HHcCCCCcEEEEcCCCC
Q 033299 86 SEFDGKLNILVSSSAKV 102 (122)
Q Consensus 86 ~~~~g~id~lv~~ag~~ 102 (122)
..+ .+=+++|+.....
T Consensus 81 ~~l-~~g~ivid~st~~ 96 (298)
T TIGR00872 81 PTL-EKGDIVIDGGNSY 96 (298)
T ss_pred hhC-CCCCEEEECCCCC
Confidence 766 4446777766554
No 418
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=96.43 E-value=0.055 Score=39.61 Aligned_cols=42 Identities=14% Similarity=0.189 Sum_probs=33.0
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCC---eEEEeecChhHHHHHH
Q 033299 13 GMTALVTGGTRGIGHAIVEELTAFGA---IVHTCSRNETELNERI 54 (122)
Q Consensus 13 ~~~~litG~~~~ig~~~~~~l~~~g~---~v~~~~r~~~~~~~~~ 54 (122)
+.+++|.|++|++|...+..+...|. +|++++++.++.+...
T Consensus 176 g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~ 220 (410)
T cd08238 176 GGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQ 220 (410)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHH
Confidence 57899999999999998876666543 7999998887765443
No 419
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=96.41 E-value=0.042 Score=34.05 Aligned_cols=42 Identities=21% Similarity=0.287 Sum_probs=30.2
Q ss_pred EEEecCCCchHHHHHHHHHHCC--CeEEEe--ecChhHHHHHHHHH
Q 033299 16 ALVTGGTRGIGHAIVEELTAFG--AIVHTC--SRNETELNERIQEW 57 (122)
Q Consensus 16 ~litG~~~~ig~~~~~~l~~~g--~~v~~~--~r~~~~~~~~~~~~ 57 (122)
+.|.|++|+||.....-+.++. ++|+.. .++.+.+.++..++
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f 46 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREF 46 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHh
Confidence 4689999999999999888876 666544 34555555555554
No 420
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=96.41 E-value=0.022 Score=37.21 Aligned_cols=39 Identities=21% Similarity=0.260 Sum_probs=31.0
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHH
Q 033299 16 ALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQ 55 (122)
Q Consensus 16 ~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 55 (122)
+-|.|+ |.+|..++..++..|++|.+++++.+.++...+
T Consensus 2 V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~ 40 (180)
T PF02737_consen 2 VAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARK 40 (180)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHH
T ss_pred EEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhh
Confidence 567777 999999999999999999999999776555443
No 421
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=96.41 E-value=0.081 Score=35.09 Aligned_cols=35 Identities=20% Similarity=0.405 Sum_probs=28.6
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeec
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSR 45 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r 45 (122)
.+++..++|.|+ ||+|.++++.|+..|. ++.+++.
T Consensus 16 ~L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~ 51 (198)
T cd01485 16 KLRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDH 51 (198)
T ss_pred HHhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEEC
Confidence 466778999988 5699999999999995 5777764
No 422
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=96.38 E-value=0.0062 Score=34.10 Aligned_cols=33 Identities=33% Similarity=0.401 Sum_probs=21.4
Q ss_pred CC-CEEEEecCCCchHHH--HHHHHHHCCCeEEEeec
Q 033299 12 KG-MTALVTGGTRGIGHA--IVEELTAFGAIVHTCSR 45 (122)
Q Consensus 12 ~~-~~~litG~~~~ig~~--~~~~l~~~g~~v~~~~r 45 (122)
.| |.+||+|+|+|.|++ ++..+ ..|+..+.++.
T Consensus 37 ~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~f 72 (78)
T PF12242_consen 37 NGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSF 72 (78)
T ss_dssp TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE-
T ss_pred CCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEee
Confidence 44 899999999999999 44444 44667666554
No 423
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=96.38 E-value=0.067 Score=37.40 Aligned_cols=42 Identities=24% Similarity=0.433 Sum_probs=34.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNER 53 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 53 (122)
.+.+++|.|+++++|..+++.....|..++++.++.++.+.+
T Consensus 140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~ 181 (334)
T PTZ00354 140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC 181 (334)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 467899999999999999999989999888788877654443
No 424
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.35 E-value=0.019 Score=37.36 Aligned_cols=42 Identities=31% Similarity=0.378 Sum_probs=35.6
Q ss_pred ccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHH
Q 033299 8 RWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETEL 50 (122)
Q Consensus 8 ~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~ 50 (122)
...+.|+++.|.|. |.||+++++.+...|++|+.++|.....
T Consensus 31 ~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~ 72 (178)
T PF02826_consen 31 GRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPE 72 (178)
T ss_dssp BS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHH
T ss_pred ccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChh
Confidence 35688999999988 9999999999999999999999986643
No 425
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.35 E-value=0.02 Score=40.19 Aligned_cols=42 Identities=21% Similarity=0.306 Sum_probs=36.6
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETEL 50 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~ 50 (122)
..+.||.++|.|.+.-.|..++..|...|+.|.++.+....+
T Consensus 154 i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l 195 (286)
T PRK14175 154 IDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDM 195 (286)
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhH
Confidence 368899999999998899999999999999999998765433
No 426
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=96.29 E-value=0.074 Score=38.09 Aligned_cols=89 Identities=19% Similarity=0.113 Sum_probs=56.4
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHH---------HHHHHhcCCeEEEEeecCCCHHHHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNER---------IQEWKSKGLKVSGSACDLKIRAERQK 79 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~---------~~~~~~~~~~~~~~~~Dv~~~~~~~~ 79 (122)
..+++|++-|.|- |.+|.+.++.|...|++|++..|.....+.. ..++.. ..++..+.+ .+.++ .+
T Consensus 12 ~~LkgKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~sl~Eaak-~ADVV~llL--Pd~~t-~~ 86 (335)
T PRK13403 12 ELLQGKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVMSVSEAVR-TAQVVQMLL--PDEQQ-AH 86 (335)
T ss_pred hhhCcCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEECCHHHHHh-cCCEEEEeC--CChHH-HH
Confidence 4678999999998 9999999999999999998876653221111 111111 224444443 34444 46
Q ss_pred HHH-HHHHHcCCCCcEEEEcCCCCC
Q 033299 80 LME-TVCSEFDGKLNILVSSSAKVP 103 (122)
Q Consensus 80 ~~~-~~~~~~~g~id~lv~~ag~~~ 103 (122)
++. .+.... .+=.+|+-..|+.-
T Consensus 87 V~~~eil~~M-K~GaiL~f~hgfni 110 (335)
T PRK13403 87 VYKAEVEENL-REGQMLLFSHGFNI 110 (335)
T ss_pred HHHHHHHhcC-CCCCEEEECCCcce
Confidence 653 466665 44467777777753
No 427
>PRK05086 malate dehydrogenase; Provisional
Probab=96.29 E-value=0.017 Score=41.04 Aligned_cols=35 Identities=26% Similarity=0.373 Sum_probs=27.5
Q ss_pred CEEEEecCCCchHHHHHHHHHH-C--CCeEEEeecChh
Q 033299 14 MTALVTGGTRGIGHAIVEELTA-F--GAIVHTCSRNET 48 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~-~--g~~v~~~~r~~~ 48 (122)
+.++|.|++|++|.+++..|.. . +..+.++++++.
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~ 38 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV 38 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC
Confidence 3688999999999999998854 2 356888888743
No 428
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=96.24 E-value=0.056 Score=38.86 Aligned_cols=39 Identities=31% Similarity=0.358 Sum_probs=30.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELN 51 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~ 51 (122)
.+++++|.|+ |++|...+......|++|++++.+.++..
T Consensus 183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~ 221 (360)
T PLN02586 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKED 221 (360)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhh
Confidence 4778999775 99999998888888998888776655433
No 429
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.24 E-value=0.016 Score=40.86 Aligned_cols=43 Identities=21% Similarity=0.244 Sum_probs=37.4
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELN 51 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~ 51 (122)
..+.||.+.+.|.++-+|..++..|.+.|+.|.++.+......
T Consensus 155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~ 197 (301)
T PRK14194 155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAK 197 (301)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHH
Confidence 3678999999999999999999999999999999977654433
No 430
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated
Probab=96.22 E-value=0.081 Score=38.42 Aligned_cols=74 Identities=14% Similarity=0.170 Sum_probs=50.8
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGK 91 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g~ 91 (122)
+.++++|+|+ |.+|..+++.+.+.|+.|++++.++...... +. -..+..|..|.+.+.+++++ ..
T Consensus 11 ~~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~---~a-----d~~~~~~~~d~~~l~~~~~~------~~ 75 (395)
T PRK09288 11 SATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQ---VA-----HRSHVIDMLDGDALRAVIER------EK 75 (395)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHH---hh-----hheEECCCCCHHHHHHHHHH------hC
Confidence 4568999987 5688889998889999999888775432111 11 11456677888777666643 36
Q ss_pred CcEEEEcCC
Q 033299 92 LNILVSSSA 100 (122)
Q Consensus 92 id~lv~~ag 100 (122)
+|+++....
T Consensus 76 id~vi~~~e 84 (395)
T PRK09288 76 PDYIVPEIE 84 (395)
T ss_pred CCEEEEeeC
Confidence 888876544
No 431
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=96.20 E-value=0.15 Score=35.59 Aligned_cols=36 Identities=19% Similarity=0.194 Sum_probs=30.4
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCC-CeEEEeec
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFG-AIVHTCSR 45 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g-~~v~~~~r 45 (122)
-.+.+..++|.|+ ||+|.++++.|+..| .++.+++.
T Consensus 26 ~kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~ 62 (268)
T PRK15116 26 QLFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDM 62 (268)
T ss_pred HHhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeC
Confidence 3567888999987 899999999999999 57777765
No 432
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=96.20 E-value=0.072 Score=37.66 Aligned_cols=88 Identities=28% Similarity=0.362 Sum_probs=54.8
Q ss_pred CCCEEEEecCCCchHHH--HHHHHHHCCCeEEEe--ecChhH---------HHHHHHHHHhc-CCeEEEEeecCCCHHHH
Q 033299 12 KGMTALVTGGTRGIGHA--IVEELTAFGAIVHTC--SRNETE---------LNERIQEWKSK-GLKVSGSACDLKIRAER 77 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~--~~~~l~~~g~~v~~~--~r~~~~---------~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~ 77 (122)
-.|.+||.|+|+|.|.+ ++..+- .|+..+.+ .|.... -+...++.... +--..-+..|+-+.+.-
T Consensus 40 gPKkVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k 118 (398)
T COG3007 40 GPKKVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMK 118 (398)
T ss_pred CCceEEEEecCCcccHHHHHHHHhC-CCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHH
Confidence 45899999999998877 333333 34443322 221110 11222333332 33455667788887877
Q ss_pred HHHHHHHHHHcCCCCcEEEEcCCC
Q 033299 78 QKLMETVCSEFDGKLNILVSSSAK 101 (122)
Q Consensus 78 ~~~~~~~~~~~~g~id~lv~~ag~ 101 (122)
+.+++.+.+.+ |++|.+|.+-+-
T Consensus 119 ~kvIe~Ik~~~-g~vDlvvYSlAs 141 (398)
T COG3007 119 QKVIEAIKQDF-GKVDLVVYSLAS 141 (398)
T ss_pred HHHHHHHHHhh-ccccEEEEeccC
Confidence 88999999999 899999886543
No 433
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=96.19 E-value=0.014 Score=37.44 Aligned_cols=44 Identities=27% Similarity=0.434 Sum_probs=33.9
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNE 52 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~ 52 (122)
..+.||.++|.|.+.-+|..++..|.++|+.|.++......+++
T Consensus 32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~ 75 (160)
T PF02882_consen 32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE 75 (160)
T ss_dssp -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH
T ss_pred CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc
Confidence 46899999999999999999999999999999998876544443
No 434
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=96.19 E-value=0.067 Score=38.29 Aligned_cols=41 Identities=22% Similarity=0.345 Sum_probs=32.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCe-EEEeecChhHHHHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAI-VHTCSRNETELNER 53 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~-v~~~~r~~~~~~~~ 53 (122)
.+.+++|.|+ |++|...+......|+. |+.++++.++.+..
T Consensus 176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~ 217 (358)
T TIGR03451 176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA 217 (358)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence 4678999985 99999998887788975 88888887665433
No 435
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=96.19 E-value=0.067 Score=38.04 Aligned_cols=78 Identities=22% Similarity=0.219 Sum_probs=48.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDG 90 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g 90 (122)
.+++++|.|+ +++|...++.+...|+ .|+++.++.++.+.. .++ +... ..|..+.+..+.+. +..++
T Consensus 172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~---ga~~---~i~~~~~~~~~~l~----~~~~~ 239 (351)
T cd08233 172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EEL---GATI---VLDPTEVDVVAEVR----KLTGG 239 (351)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh---CCCE---EECCCccCHHHHHH----HHhCC
Confidence 4678999985 8999999988888898 788888877665433 222 2221 12333333222222 22212
Q ss_pred -CCcEEEEcCCC
Q 033299 91 -KLNILVSSSAK 101 (122)
Q Consensus 91 -~id~lv~~ag~ 101 (122)
.+|++|.++|.
T Consensus 240 ~~~d~vid~~g~ 251 (351)
T cd08233 240 GGVDVSFDCAGV 251 (351)
T ss_pred CCCCEEEECCCC
Confidence 49999998873
No 436
>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2. UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=96.19 E-value=0.087 Score=37.51 Aligned_cols=29 Identities=31% Similarity=0.508 Sum_probs=24.1
Q ss_pred EEEecCCCchHHHHHHHHHHCCC-eEEEeec
Q 033299 16 ALVTGGTRGIGHAIVEELTAFGA-IVHTCSR 45 (122)
Q Consensus 16 ~litG~~~~ig~~~~~~l~~~g~-~v~~~~r 45 (122)
++|.|+ ||+|.++++.|+..|. ++.+++.
T Consensus 2 VlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~ 31 (312)
T cd01489 2 VLVVGA-GGIGCELLKNLVLTGFGEIHIIDL 31 (312)
T ss_pred EEEECC-CHHHHHHHHHHHHhcCCeEEEEcC
Confidence 678886 9999999999999884 5777764
No 437
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=96.19 E-value=0.054 Score=37.03 Aligned_cols=45 Identities=24% Similarity=0.278 Sum_probs=37.2
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHH
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWK 58 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~ 58 (122)
+.|+.+|=.||+|| -++..+++.|++|..++-+++..+.......
T Consensus 58 l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~ 102 (243)
T COG2227 58 LPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKLHAL 102 (243)
T ss_pred CCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHHhhh
Confidence 67899999999999 7888999999999999998877665544333
No 438
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=96.18 E-value=0.12 Score=36.57 Aligned_cols=35 Identities=34% Similarity=0.586 Sum_probs=30.5
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRN 46 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~ 46 (122)
.+.+++|+|+++++|.++++.....|.+|+.+.++
T Consensus 162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~ 196 (350)
T cd08248 162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST 196 (350)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc
Confidence 37899999999999999999888889998877754
No 439
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=96.17 E-value=0.08 Score=37.40 Aligned_cols=40 Identities=25% Similarity=0.367 Sum_probs=34.8
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELN 51 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~ 51 (122)
.+.+++|.|+++++|.+++..+...|.+|+.+.+++++.+
T Consensus 165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~ 204 (341)
T cd08297 165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLE 204 (341)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence 3679999999999999999999999999999988876554
No 440
>PRK14968 putative methyltransferase; Provisional
Probab=96.16 E-value=0.12 Score=33.35 Aligned_cols=77 Identities=19% Similarity=0.189 Sum_probs=51.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCe---EEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLK---VSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
.++.+|-.|++.|. ++..++..+.+|+.++++++......+.+...+.+ +.++.+|+.+. +.
T Consensus 23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-----~~------- 87 (188)
T PRK14968 23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP-----FR------- 87 (188)
T ss_pred CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc-----cc-------
Confidence 56788888877665 34444445789999999987766665555443322 77788886442 11
Q ss_pred CCCCcEEEEcCCCCC
Q 033299 89 DGKLNILVSSSAKVP 103 (122)
Q Consensus 89 ~g~id~lv~~ag~~~ 103 (122)
...+|.++.|..+..
T Consensus 88 ~~~~d~vi~n~p~~~ 102 (188)
T PRK14968 88 GDKFDVILFNPPYLP 102 (188)
T ss_pred ccCceEEEECCCcCC
Confidence 136899999887654
No 441
>PRK07411 hypothetical protein; Validated
Probab=96.16 E-value=0.091 Score=38.50 Aligned_cols=35 Identities=26% Similarity=0.363 Sum_probs=29.2
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeec
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSR 45 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r 45 (122)
+++..+++|.|+ ||+|..+++.|+..|. ++.+++.
T Consensus 35 ~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~ 70 (390)
T PRK07411 35 RLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDF 70 (390)
T ss_pred HHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECC
Confidence 566788999988 8999999999999984 6777764
No 442
>PRK10637 cysG siroheme synthase; Provisional
Probab=96.16 E-value=0.092 Score=39.25 Aligned_cols=43 Identities=16% Similarity=0.169 Sum_probs=36.9
Q ss_pred cccccccccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecC
Q 033299 3 ESREQRWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRN 46 (122)
Q Consensus 3 ~~~~~~~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~ 46 (122)
.+-|-+.++++|.+||.|| |.++..-++.|++.|++|.+++..
T Consensus 2 ~~~P~~~~l~~~~vlvvGg-G~vA~rk~~~ll~~ga~v~visp~ 44 (457)
T PRK10637 2 DHLPIFCQLRDRDCLLVGG-GDVAERKARLLLDAGARLTVNALA 44 (457)
T ss_pred CeeceEEEcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCC
Confidence 3455678999999999998 889999999999999998888654
No 443
>PLN02740 Alcohol dehydrogenase-like
Probab=96.15 E-value=0.12 Score=37.40 Aligned_cols=41 Identities=22% Similarity=0.279 Sum_probs=33.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecChhHHHHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRNETELNER 53 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~~~~~~~~ 53 (122)
.+.+++|.|+ |++|...+..+...|+ +|++++++.++.+..
T Consensus 198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a 239 (381)
T PLN02740 198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG 239 (381)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH
Confidence 4678999985 9999999988888898 698888887665443
No 444
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=96.15 E-value=0.12 Score=37.19 Aligned_cols=79 Identities=16% Similarity=0.205 Sum_probs=48.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCC-HHHHHHHHHHHHHHcC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRNETELNERIQEWKSKGLKVSGSACDLKI-RAERQKLMETVCSEFD 89 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~~ 89 (122)
.+.+++|+|+ |++|...+......|+ +|++++++.++.+.. .++ +... ..|..+ .+.+.+.+.++. +
T Consensus 185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~---Ga~~---~i~~~~~~~~~~~~v~~~~---~ 253 (368)
T TIGR02818 185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKL---GATD---CVNPNDYDKPIQEVIVEIT---D 253 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCCe---EEcccccchhHHHHHHHHh---C
Confidence 3678999985 9999999887777887 799888887765543 222 2221 113222 122222222221 1
Q ss_pred CCCcEEEEcCCC
Q 033299 90 GKLNILVSSSAK 101 (122)
Q Consensus 90 g~id~lv~~ag~ 101 (122)
+.+|++|.++|.
T Consensus 254 ~g~d~vid~~G~ 265 (368)
T TIGR02818 254 GGVDYSFECIGN 265 (368)
T ss_pred CCCCEEEECCCC
Confidence 358888888774
No 445
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=96.15 E-value=0.14 Score=36.58 Aligned_cols=40 Identities=30% Similarity=0.445 Sum_probs=33.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNE 52 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~ 52 (122)
.+.+++|.|+ |++|...+..+...|.+|+++++++++.+.
T Consensus 166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~ 205 (349)
T TIGR03201 166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEM 205 (349)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence 4789999999 999999988888889999988888776543
No 446
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.14 E-value=0.11 Score=35.40 Aligned_cols=36 Identities=22% Similarity=0.215 Sum_probs=30.1
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeec
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSR 45 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r 45 (122)
-++++..++|.|+ ||+|.++++.|+..|. ++++++.
T Consensus 7 ~~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~ 43 (231)
T cd00755 7 EKLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDF 43 (231)
T ss_pred HHHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECC
Confidence 3567788999988 8999999999999984 6777764
No 447
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=96.12 E-value=0.047 Score=38.52 Aligned_cols=37 Identities=16% Similarity=0.157 Sum_probs=32.0
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHH
Q 033299 15 TALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNE 52 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~ 52 (122)
.+.|.| .|.+|.+++..|+..|++|++.+++.+..+.
T Consensus 4 ~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~ 40 (308)
T PRK06129 4 SVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAA 40 (308)
T ss_pred EEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHH
Confidence 577888 5889999999999999999999999765554
No 448
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.11 E-value=0.074 Score=37.99 Aligned_cols=76 Identities=22% Similarity=0.239 Sum_probs=51.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCC-CHHHHHHHHHHHHHHcCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLK-IRAERQKLMETVCSEFDG 90 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~~~~~~~~~~~~~~g 90 (122)
-|+++-|+|+.| +|.--++.-..-|++|++++++..+-++..+.+- .+.+ .|.+ |++-++++.... ++
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LG---Ad~f---v~~~~d~d~~~~~~~~~----dg 249 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLG---ADVF---VDSTEDPDIMKAIMKTT----DG 249 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcC---ccee---EEecCCHHHHHHHHHhh----cC
Confidence 688999999976 8876665555569999999999877777766653 3332 3444 666666666443 35
Q ss_pred CCcEEEEc
Q 033299 91 KLNILVSS 98 (122)
Q Consensus 91 ~id~lv~~ 98 (122)
-+|.++|.
T Consensus 250 ~~~~v~~~ 257 (360)
T KOG0023|consen 250 GIDTVSNL 257 (360)
T ss_pred cceeeeec
Confidence 56777655
No 449
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=96.11 E-value=0.019 Score=39.57 Aligned_cols=44 Identities=16% Similarity=0.143 Sum_probs=35.8
Q ss_pred EEEecCCCchHHHHHHHHHHCC----CeEEEeecChhHHHHHHHHHHh
Q 033299 16 ALVTGGTRGIGHAIVEELTAFG----AIVHTCSRNETELNERIQEWKS 59 (122)
Q Consensus 16 ~litG~~~~ig~~~~~~l~~~g----~~v~~~~r~~~~~~~~~~~~~~ 59 (122)
+.|.|++|.+|..++..|+..+ ..+++++.++++++....++..
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~ 48 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQD 48 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHH
Confidence 3588998899999999999888 6799999988777666666543
No 450
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.10 E-value=0.19 Score=36.04 Aligned_cols=84 Identities=21% Similarity=0.194 Sum_probs=56.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDG 90 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g 90 (122)
.|.++||.|+ |.||.........-|+ +|++++-.+.+++-..+ + |.+.......-.+.+.+.+.+++.....
T Consensus 169 ~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~-~---Ga~~~~~~~~~~~~~~~~~~v~~~~g~~-- 241 (354)
T KOG0024|consen 169 KGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAKK-F---GATVTDPSSHKSSPQELAELVEKALGKK-- 241 (354)
T ss_pred cCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHH-h---CCeEEeeccccccHHHHHHHHHhhcccc--
Confidence 4678999998 8999998888888886 69999988877654433 3 3333333333334455555555544322
Q ss_pred CCcEEEEcCCCC
Q 033299 91 KLNILVSSSAKV 102 (122)
Q Consensus 91 ~id~lv~~ag~~ 102 (122)
++|+.|.++|.-
T Consensus 242 ~~d~~~dCsG~~ 253 (354)
T KOG0024|consen 242 QPDVTFDCSGAE 253 (354)
T ss_pred CCCeEEEccCch
Confidence 589999999975
No 451
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=96.09 E-value=0.19 Score=36.13 Aligned_cols=79 Identities=19% Similarity=0.247 Sum_probs=49.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCH-HHHHHHHHHHHHHcC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIR-AERQKLMETVCSEFD 89 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~~~~~~~~~~~~~~ 89 (122)
.+.+++|.|+ |++|...+..+...|+ +|+.++++.++.+.. .++ +.... .|..+. +.+.+.+.++. +
T Consensus 186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l---Ga~~~---i~~~~~~~~~~~~v~~~~---~ 254 (368)
T cd08300 186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF---GATDC---VNPKDHDKPIQQVLVEMT---D 254 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc---CCCEE---EcccccchHHHHHHHHHh---C
Confidence 4779999985 9999999988888898 698898888765533 222 32211 233322 12333333322 1
Q ss_pred CCCcEEEEcCCC
Q 033299 90 GKLNILVSSSAK 101 (122)
Q Consensus 90 g~id~lv~~ag~ 101 (122)
+.+|++|.+.|.
T Consensus 255 ~g~d~vid~~g~ 266 (368)
T cd08300 255 GGVDYTFECIGN 266 (368)
T ss_pred CCCcEEEECCCC
Confidence 358999988774
No 452
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=96.08 E-value=0.083 Score=37.04 Aligned_cols=40 Identities=15% Similarity=0.149 Sum_probs=33.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELN 51 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~ 51 (122)
.+.+++|.|+++.+|..+++.....|.+|+.+.++.++..
T Consensus 140 ~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~ 179 (327)
T PRK10754 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQ 179 (327)
T ss_pred CCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 4679999999999999999888888999988888766544
No 453
>PRK14851 hypothetical protein; Provisional
Probab=96.08 E-value=0.12 Score=40.53 Aligned_cols=81 Identities=11% Similarity=0.192 Sum_probs=51.9
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecC-------------------hhHHHHHHHHHHhcC--CeEEEE
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRN-------------------ETELNERIQEWKSKG--LKVSGS 67 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~~~~~~--~~~~~~ 67 (122)
++.+.+++|.|+ ||+|..++..|+..|. ++.+++.+ ..+.+...+.+...+ .++..+
T Consensus 40 kL~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~ 118 (679)
T PRK14851 40 RLAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPF 118 (679)
T ss_pred HHhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEE
Confidence 567889999996 8999999999999984 56666532 223333444444433 356666
Q ss_pred eecCCCHHHHHHHHHHHHHHcCCCCcEEEEcCC
Q 033299 68 ACDLKIRAERQKLMETVCSEFDGKLNILVSSSA 100 (122)
Q Consensus 68 ~~Dv~~~~~~~~~~~~~~~~~~g~id~lv~~ag 100 (122)
...++. +.+..++ ...|+||.+.-
T Consensus 119 ~~~i~~-~n~~~~l--------~~~DvVid~~D 142 (679)
T PRK14851 119 PAGINA-DNMDAFL--------DGVDVVLDGLD 142 (679)
T ss_pred ecCCCh-HHHHHHH--------hCCCEEEECCC
Confidence 666653 4444444 34677776554
No 454
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=96.08 E-value=0.095 Score=38.01 Aligned_cols=37 Identities=35% Similarity=0.416 Sum_probs=30.5
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETE 49 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~ 49 (122)
.+.+++|.|+ |++|...+......|++|++++++.++
T Consensus 178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~ 214 (375)
T PLN02178 178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEK 214 (375)
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHH
Confidence 4678999886 899999998888889998888876554
No 455
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=96.07 E-value=0.12 Score=37.97 Aligned_cols=35 Identities=29% Similarity=0.372 Sum_probs=29.0
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeec
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSR 45 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r 45 (122)
++++..++|.|+ ||+|..++..|+..|. ++.+++.
T Consensus 39 ~L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~ 74 (392)
T PRK07878 39 RLKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEF 74 (392)
T ss_pred HHhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECC
Confidence 456788999988 8999999999999884 6777754
No 456
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=96.07 E-value=0.038 Score=39.28 Aligned_cols=38 Identities=18% Similarity=0.347 Sum_probs=33.5
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecCh
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNE 47 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~ 47 (122)
..+.+|++.|.|. |.||.++++.|...|++|+..++..
T Consensus 132 ~~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~ 169 (312)
T PRK15469 132 YHREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSR 169 (312)
T ss_pred CCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 3578899999987 9999999999999999999888754
No 457
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.05 E-value=0.06 Score=38.57 Aligned_cols=39 Identities=26% Similarity=0.373 Sum_probs=34.8
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChh
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNET 48 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~ 48 (122)
..+.||++.|.|. |.||.++++.+...|++|+.++|+..
T Consensus 146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~ 184 (333)
T PRK13243 146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRK 184 (333)
T ss_pred cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence 3578999999998 99999999999999999999988643
No 458
>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function. One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].
Probab=96.04 E-value=0.026 Score=39.80 Aligned_cols=73 Identities=11% Similarity=0.020 Sum_probs=55.7
Q ss_pred CCEEEEecC-CCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHc
Q 033299 13 GMTALVTGG-TRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEF 88 (122)
Q Consensus 13 ~~~~litG~-~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 88 (122)
..+++|.|. ..-|++.++..|-++|+.|+++..+.++......+- ...+.....|..++.++...+.+..+.+
T Consensus 3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~---~~dI~~L~ld~~~~~~~~~~l~~f~~~L 76 (299)
T PF08643_consen 3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED---RPDIRPLWLDDSDPSSIHASLSRFASLL 76 (299)
T ss_pred eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc---CCCCCCcccCCCCCcchHHHHHHHHHHh
Confidence 457889985 789999999999999999999999877655443332 2347777888877777777777666554
No 459
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=96.03 E-value=0.12 Score=37.18 Aligned_cols=39 Identities=31% Similarity=0.356 Sum_probs=31.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecChhHHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRNETELN 51 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~~~~~~ 51 (122)
.+.+++|.|+ |++|...+..+...|+ +|+++++++++.+
T Consensus 191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~ 230 (371)
T cd08281 191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLA 230 (371)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHH
Confidence 4678999985 8999998887777898 5888888877654
No 460
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.03 E-value=0.031 Score=38.96 Aligned_cols=44 Identities=18% Similarity=0.246 Sum_probs=36.8
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecChhHHHHHHHHH
Q 033299 13 GMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRNETELNERIQEW 57 (122)
Q Consensus 13 ~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~ 57 (122)
++.++|.|+ ||-+++++..|.+.|. +|.++.|+.++.+.+.+.+
T Consensus 122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~ 166 (272)
T PRK12550 122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY 166 (272)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence 468899987 9999999999999986 5999999998877765543
No 461
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=96.03 E-value=0.18 Score=34.41 Aligned_cols=29 Identities=28% Similarity=0.562 Sum_probs=23.6
Q ss_pred EEEecCCCchHHHHHHHHHHCCC-eEEEeec
Q 033299 16 ALVTGGTRGIGHAIVEELTAFGA-IVHTCSR 45 (122)
Q Consensus 16 ~litG~~~~ig~~~~~~l~~~g~-~v~~~~r 45 (122)
++|.|+ ||+|.++++.|+..|. ++.+++.
T Consensus 2 VlvvG~-GGlG~eilk~La~~Gvg~i~ivD~ 31 (234)
T cd01484 2 VLLVGA-GGIGCELLKNLALMGFGQIHVIDM 31 (234)
T ss_pred EEEECC-CHHHHHHHHHHHHcCCCeEEEEeC
Confidence 577775 9999999999999984 5777664
No 462
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=95.99 E-value=0.15 Score=36.44 Aligned_cols=39 Identities=26% Similarity=0.264 Sum_probs=32.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecChhHHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRNETELN 51 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~~~~~~ 51 (122)
.+++++|+| +|++|..++..+...|+ +|+++.++.++..
T Consensus 177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~ 216 (361)
T cd08231 177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLE 216 (361)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 577899997 59999999988888898 8988888776543
No 463
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=95.99 E-value=0.092 Score=36.40 Aligned_cols=39 Identities=31% Similarity=0.307 Sum_probs=31.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCe-EEEeecChhHHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAI-VHTCSRNETELN 51 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~-v~~~~r~~~~~~ 51 (122)
.+.+++|.| ++++|.++++.+...|.+ |+++.++.++.+
T Consensus 129 ~~~~vlI~g-~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~ 168 (312)
T cd08269 129 AGKTVAVIG-AGFIGLLFLQLAAAAGARRVIAIDRRPARLA 168 (312)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHH
Confidence 467899996 589999999888888988 888888766544
No 464
>KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones]
Probab=95.98 E-value=0.043 Score=41.11 Aligned_cols=84 Identities=14% Similarity=0.203 Sum_probs=53.0
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD 89 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 89 (122)
+++..+|+.|| ||||.++.+.|+..|. .|.+++.+-=.+. ..+.++.|-.-||....+ .+..++..+|.
T Consensus 10 i~~~riLvVGa-GGIGCELLKnLal~gf~~IhiIDlDTIDlS-------NLNRQFLFrkkhVgqsKA--~vA~~~v~~Fn 79 (603)
T KOG2013|consen 10 IKSGRILVVGA-GGIGCELLKNLALTGFEEIHIIDLDTIDLS-------NLNRQFLFRKKHVGQSKA--TVAAKAVKQFN 79 (603)
T ss_pred hccCeEEEEec-CcccHHHHHHHHHhcCCeeEEEeccceecc-------chhhhheeehhhcCchHH--HHHHHHHHHhC
Confidence 45678899988 9999999999999996 4777765321111 111235555556665542 44455555553
Q ss_pred CCCcEEEEcCCCCCc
Q 033299 90 GKLNILVSSSAKVPF 104 (122)
Q Consensus 90 g~id~lv~~ag~~~~ 104 (122)
++++++-..|.+..+
T Consensus 80 pn~~l~~yhanI~e~ 94 (603)
T KOG2013|consen 80 PNIKLVPYHANIKEP 94 (603)
T ss_pred CCCceEeccccccCc
Confidence 467777777766654
No 465
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=95.96 E-value=0.11 Score=36.81 Aligned_cols=40 Identities=33% Similarity=0.341 Sum_probs=31.3
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCe-EEEeecChhHHHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAI-VHTCSRNETELNE 52 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~-v~~~~r~~~~~~~ 52 (122)
.+.+++|.| ++++|..++..+...|.+ |+.+.+++++.+.
T Consensus 162 ~g~~vlI~g-~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~ 202 (343)
T cd05285 162 PGDTVLVFG-AGPIGLLTAAVAKAFGATKVVVTDIDPSRLEF 202 (343)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHH
Confidence 467899976 589999998888888987 8888777665543
No 466
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=95.90 E-value=0.032 Score=39.85 Aligned_cols=77 Identities=17% Similarity=0.141 Sum_probs=47.5
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-------eEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHH-H-HHHH--HH
Q 033299 15 TALVTGGTRGIGHAIVEELTAFGA-------IVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAE-R-QKLM--ET 83 (122)
Q Consensus 15 ~~litG~~~~ig~~~~~~l~~~g~-------~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~-~~~~--~~ 83 (122)
.+.|+|++|.+|..++..|...+. .++++++++..- .......|+.|... . ..+. ..
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~------------~a~g~~~Dl~d~~~~~~~~~~~~~~ 68 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK------------VLEGVVMELMDCAFPLLDGVVPTHD 68 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc------------ccceeEeehhcccchhcCceeccCC
Confidence 368999999999999999987553 588888864320 02233444444331 1 0000 01
Q ss_pred HHHHcCCCCcEEEEcCCCCCc
Q 033299 84 VCSEFDGKLNILVSSSAKVPF 104 (122)
Q Consensus 84 ~~~~~~g~id~lv~~ag~~~~ 104 (122)
..+.+ ...|++|+.||....
T Consensus 69 ~~~~~-~~aDiVVitAG~~~~ 88 (324)
T TIGR01758 69 PAVAF-TDVDVAILVGAFPRK 88 (324)
T ss_pred hHHHh-CCCCEEEEcCCCCCC
Confidence 13334 578999999998644
No 467
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.90 E-value=0.07 Score=37.70 Aligned_cols=38 Identities=29% Similarity=0.440 Sum_probs=34.7
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEee-cCh
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCS-RNE 47 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~-r~~ 47 (122)
.+.||.++|.|.++-+|..++..|.+.|+.|.++. |+.
T Consensus 155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~ 193 (296)
T PRK14188 155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR 193 (296)
T ss_pred CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence 57899999999999999999999999999999995 654
No 468
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=95.88 E-value=0.048 Score=31.42 Aligned_cols=40 Identities=28% Similarity=0.372 Sum_probs=32.5
Q ss_pred EecCCCchHHHHHHHHHHCC---CeEEEe-ecChhHHHHHHHHHH
Q 033299 18 VTGGTRGIGHAIVEELTAFG---AIVHTC-SRNETELNERIQEWK 58 (122)
Q Consensus 18 itG~~~~ig~~~~~~l~~~g---~~v~~~-~r~~~~~~~~~~~~~ 58 (122)
+. |+|.+|.++++.|.+.| .+|.++ .|++++.+++.+++.
T Consensus 4 iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~ 47 (96)
T PF03807_consen 4 II-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYG 47 (96)
T ss_dssp EE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCT
T ss_pred EE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhc
Confidence 44 55999999999999999 888855 999988877766553
No 469
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=95.86 E-value=0.18 Score=36.28 Aligned_cols=79 Identities=18% Similarity=0.244 Sum_probs=48.3
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCH-HHHHHHHHHHHHHcC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIR-AERQKLMETVCSEFD 89 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~~~~~~~~~~~~~~ 89 (122)
.+.+++|.|+ |++|...+......|. +|++++++.++.+.. ++ .+.... .|..+. +.+.+.+.++. +
T Consensus 187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~---~Ga~~~---i~~~~~~~~~~~~v~~~~---~ 255 (369)
T cd08301 187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KK---FGVTEF---VNPKDHDKPVQEVIAEMT---G 255 (369)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HH---cCCceE---EcccccchhHHHHHHHHh---C
Confidence 4678999985 9999998888878897 799988887655432 22 232211 122221 22333333322 1
Q ss_pred CCCcEEEEcCCC
Q 033299 90 GKLNILVSSSAK 101 (122)
Q Consensus 90 g~id~lv~~ag~ 101 (122)
+.+|++|...|.
T Consensus 256 ~~~d~vid~~G~ 267 (369)
T cd08301 256 GGVDYSFECTGN 267 (369)
T ss_pred CCCCEEEECCCC
Confidence 358888887764
No 470
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=95.85 E-value=0.22 Score=30.97 Aligned_cols=77 Identities=10% Similarity=0.161 Sum_probs=47.5
Q ss_pred EEEecCCCchHHHHHHHHHHCCC-eEEEeecC-------------------hhHHHHHHHHHHhcCC--eEEEEeecCCC
Q 033299 16 ALVTGGTRGIGHAIVEELTAFGA-IVHTCSRN-------------------ETELNERIQEWKSKGL--KVSGSACDLKI 73 (122)
Q Consensus 16 ~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~~~~~~~--~~~~~~~Dv~~ 73 (122)
++|.|+ ||+|.++++.|+..|. ++.+++.+ ..+.+...+.++..+. ++..+..++..
T Consensus 2 VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~ 80 (143)
T cd01483 2 VLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISE 80 (143)
T ss_pred EEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecCh
Confidence 678887 9999999999999996 67777643 2334444445544432 34455555443
Q ss_pred HHHHHHHHHHHHHHcCCCCcEEEEcCCCC
Q 033299 74 RAERQKLMETVCSEFDGKLNILVSSSAKV 102 (122)
Q Consensus 74 ~~~~~~~~~~~~~~~~g~id~lv~~ag~~ 102 (122)
... .+.+ .+.|++|.+..-.
T Consensus 81 ~~~--------~~~~-~~~diVi~~~d~~ 100 (143)
T cd01483 81 DNL--------DDFL-DGVDLVIDAIDNI 100 (143)
T ss_pred hhH--------HHHh-cCCCEEEECCCCH
Confidence 221 1122 4678888776653
No 471
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.85 E-value=0.053 Score=38.06 Aligned_cols=42 Identities=21% Similarity=0.390 Sum_probs=36.1
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETEL 50 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~ 50 (122)
..+.||.++|.|.+.-.|..++..|..+|+.|.++......+
T Consensus 153 i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l 194 (285)
T PRK14191 153 IEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDL 194 (285)
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHH
Confidence 367899999999999999999999999999999887554433
No 472
>PRK06932 glycerate dehydrogenase; Provisional
Probab=95.84 E-value=0.089 Score=37.41 Aligned_cols=64 Identities=17% Similarity=0.199 Sum_probs=44.2
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHH-H---HHHHHHHhcCCeEEEEeecCCCHH
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETEL-N---ERIQEWKSKGLKVSGSACDLKIRA 75 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~-~---~~~~~~~~~~~~~~~~~~Dv~~~~ 75 (122)
.+.||++.|.|. |.||+++++.+...|.+|+..++..... . ...+++-. ..++..+.+-++...
T Consensus 144 ~l~gktvgIiG~-G~IG~~va~~l~~fg~~V~~~~~~~~~~~~~~~~~l~ell~-~sDiv~l~~Plt~~T 211 (314)
T PRK06932 144 DVRGSTLGVFGK-GCLGTEVGRLAQALGMKVLYAEHKGASVCREGYTPFEEVLK-QADIVTLHCPLTETT 211 (314)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCcccccccccCCHHHHHH-hCCEEEEcCCCChHH
Confidence 688999999998 9999999999999999998887653210 0 01122211 235777777776543
No 473
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=95.83 E-value=0.11 Score=37.16 Aligned_cols=34 Identities=29% Similarity=0.179 Sum_probs=28.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRN 46 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~ 46 (122)
.++.++|+|+ |++|...+..+...|++|++++|+
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~ 205 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRR 205 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence 5788999986 999999988777788899998883
No 474
>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]
Probab=95.82 E-value=0.16 Score=36.52 Aligned_cols=87 Identities=23% Similarity=0.364 Sum_probs=50.9
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHH------h--cCCeEEEEeecCCCHHHHHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWK------S--KGLKVSGSACDLKIRAERQKL 80 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~------~--~~~~~~~~~~Dv~~~~~~~~~ 80 (122)
..+.||++.|.|. |+||.+++++|...|..+.-..|.+...+....... + ....+..+.|-++... .++
T Consensus 158 ~~~~gK~vgilG~-G~IG~~ia~rL~~Fg~~i~y~~r~~~~~~~~~~~~~~~~d~~~~~~~sD~ivv~~pLt~~T--~~l 234 (336)
T KOG0069|consen 158 YDLEGKTVGILGL-GRIGKAIAKRLKPFGCVILYHSRTQLPPEEAYEYYAEFVDIEELLANSDVIVVNCPLTKET--RHL 234 (336)
T ss_pred ccccCCEEEEecC-cHHHHHHHHhhhhccceeeeecccCCchhhHHHhcccccCHHHHHhhCCEEEEecCCCHHH--HHH
Confidence 4678999999998 999999999999999555555665433222222211 1 1234666666655433 344
Q ss_pred HH-HHHHHcCCCCcEEEEcC
Q 033299 81 ME-TVCSEFDGKLNILVSSS 99 (122)
Q Consensus 81 ~~-~~~~~~~g~id~lv~~a 99 (122)
+. +..++. ++=-+|||.|
T Consensus 235 iNk~~~~~m-k~g~vlVN~a 253 (336)
T KOG0069|consen 235 INKKFIEKM-KDGAVLVNTA 253 (336)
T ss_pred hhHHHHHhc-CCCeEEEecc
Confidence 43 334444 3333455544
No 475
>PRK06487 glycerate dehydrogenase; Provisional
Probab=95.82 E-value=0.037 Score=39.40 Aligned_cols=64 Identities=20% Similarity=0.208 Sum_probs=44.1
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHH--H-HHHHHHHhcCCeEEEEeecCCCHH
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETEL--N-ERIQEWKSKGLKVSGSACDLKIRA 75 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~--~-~~~~~~~~~~~~~~~~~~Dv~~~~ 75 (122)
.+.||++.|.|. |.||+++++.+...|++|+..++..... . ...+++-. ...+..+.+-++...
T Consensus 145 ~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~~~~~~~~~~~l~ell~-~sDiv~l~lPlt~~T 211 (317)
T PRK06487 145 ELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLPGRPARPDRLPLDELLP-QVDALTLHCPLTEHT 211 (317)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCCcccccccCHHHHHH-hCCEEEECCCCChHH
Confidence 588999999998 9999999999999999999888753210 0 01122211 135777777766543
No 476
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.81 E-value=0.15 Score=38.17 Aligned_cols=78 Identities=22% Similarity=0.241 Sum_probs=50.1
Q ss_pred cCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCC
Q 033299 11 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDG 90 (122)
Q Consensus 11 ~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g 90 (122)
+.++.++|.|. |+.|.++++.|...|+.|.+.+++.....+. +...+ +.+.... .+.+ .+ .
T Consensus 13 ~~~~~v~v~G~-G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~---l~~~g--i~~~~~~-~~~~----~~--------~ 73 (473)
T PRK00141 13 ELSGRVLVAGA-GVSGRGIAAMLSELGCDVVVADDNETARHKL---IEVTG--VADISTA-EASD----QL--------D 73 (473)
T ss_pred ccCCeEEEEcc-CHHHHHHHHHHHHCCCEEEEECCChHHHHHH---HHhcC--cEEEeCC-Cchh----Hh--------c
Confidence 45678899985 8899999999999999999999875443221 12222 2222210 0111 11 3
Q ss_pred CCcEEEEcCCCCCcchh
Q 033299 91 KLNILVSSSAKVPFELL 107 (122)
Q Consensus 91 ~id~lv~~ag~~~~~~~ 107 (122)
..|.||.+.|+....+.
T Consensus 74 ~~d~vV~Spgi~~~~p~ 90 (473)
T PRK00141 74 SFSLVVTSPGWRPDSPL 90 (473)
T ss_pred CCCEEEeCCCCCCCCHH
Confidence 57899999999876543
No 477
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=95.81 E-value=0.025 Score=37.18 Aligned_cols=81 Identities=15% Similarity=0.125 Sum_probs=53.5
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCC--eEEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGA--IVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCS 86 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 86 (122)
+.++++.++|.|++|-.|..+.+++++.+. +|+++.|.+....+. +..+.....|... +.+.....
T Consensus 14 f~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at-------~k~v~q~~vDf~K---l~~~a~~~-- 81 (238)
T KOG4039|consen 14 FRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT-------DKVVAQVEVDFSK---LSQLATNE-- 81 (238)
T ss_pred HhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc-------cceeeeEEechHH---HHHHHhhh--
Confidence 567888999999999999999999999873 688887764211111 1234444455433 33444332
Q ss_pred HcCCCCcEEEEcCCCCCc
Q 033299 87 EFDGKLNILVSSSAKVPF 104 (122)
Q Consensus 87 ~~~g~id~lv~~ag~~~~ 104 (122)
..+|+++++-|-...
T Consensus 82 ---qg~dV~FcaLgTTRg 96 (238)
T KOG4039|consen 82 ---QGPDVLFCALGTTRG 96 (238)
T ss_pred ---cCCceEEEeeccccc
Confidence 357999888776543
No 478
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=95.81 E-value=0.13 Score=36.36 Aligned_cols=79 Identities=22% Similarity=0.193 Sum_probs=47.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCe-EEEeecChhHHHHHHHHHHhcCCeEEEEeecCCCHHHHHHHHHHHHHHcCC
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAI-VHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDG 90 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~g 90 (122)
.+.+++|.| ++++|..++......|.+ |+++.++.++.+.. .++ +... ..+..+.+....+. +.... .
T Consensus 165 ~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~-~~~---g~~~---~~~~~~~~~~~~i~-~~~~~--~ 233 (343)
T cd08235 165 PGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFA-KKL---GADY---TIDAAEEDLVEKVR-ELTDG--R 233 (343)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHh---CCcE---EecCCccCHHHHHH-HHhCC--c
Confidence 467999996 689999998877778988 88777777665543 222 2211 12222333222222 22211 2
Q ss_pred CCcEEEEcCCC
Q 033299 91 KLNILVSSSAK 101 (122)
Q Consensus 91 ~id~lv~~ag~ 101 (122)
.+|++++++|.
T Consensus 234 ~vd~vld~~~~ 244 (343)
T cd08235 234 GADVVIVATGS 244 (343)
T ss_pred CCCEEEECCCC
Confidence 48999998773
No 479
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.80 E-value=0.036 Score=38.91 Aligned_cols=43 Identities=28% Similarity=0.453 Sum_probs=36.5
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELN 51 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~ 51 (122)
..+.||.++|.|.+.-+|+.++..|..+|+.|.++.+....+.
T Consensus 154 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~ 196 (285)
T PRK14189 154 IPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLA 196 (285)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHH
Confidence 3578999999999999999999999999999998876544333
No 480
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.78 E-value=0.41 Score=33.48 Aligned_cols=40 Identities=18% Similarity=0.142 Sum_probs=33.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHH
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERI 54 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~ 54 (122)
+.+.|.|+ |.+|..++..|+..|++|.+.+++++..+...
T Consensus 5 ~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~ 44 (292)
T PRK07530 5 KKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSADRLEAGL 44 (292)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence 45777777 99999999999999999999999987765543
No 481
>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].
Probab=95.75 E-value=0.042 Score=35.14 Aligned_cols=41 Identities=22% Similarity=0.206 Sum_probs=33.9
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHH
Q 033299 16 ALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWK 58 (122)
Q Consensus 16 ~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~ 58 (122)
++++|+.+-+|++++..|.++|.+|++. +.+..+.+..++.
T Consensus 1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~ 41 (164)
T PF12076_consen 1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAP 41 (164)
T ss_pred CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcC
Confidence 4789999999999999999999999988 5556666665554
No 482
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=95.70 E-value=0.19 Score=35.78 Aligned_cols=39 Identities=26% Similarity=0.390 Sum_probs=31.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCe-EEEeecChhHHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAI-VHTCSRNETELN 51 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~-v~~~~r~~~~~~ 51 (122)
.+++++|.| +|++|...+......|.+ |++++++.++.+
T Consensus 160 ~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~ 199 (347)
T PRK10309 160 EGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLA 199 (347)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHH
Confidence 467999997 499999999888888986 677777776654
No 483
>PRK14852 hypothetical protein; Provisional
Probab=95.70 E-value=0.17 Score=41.17 Aligned_cols=81 Identities=12% Similarity=0.129 Sum_probs=51.1
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecC-------------------hhHHHHHHHHHHhcCC--eEEEE
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRN-------------------ETELNERIQEWKSKGL--KVSGS 67 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~~~~~~~--~~~~~ 67 (122)
++++..++|.|+ ||+|..++..|+..|. ++.+++.+ ..+.+...+.+...+. ++..+
T Consensus 329 kL~~srVlVvGl-GGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~ 407 (989)
T PRK14852 329 RLLRSRVAIAGL-GGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSF 407 (989)
T ss_pred HHhcCcEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEE
Confidence 567788999996 8999999999999984 66666542 2344444445554443 45555
Q ss_pred eecCCCHHHHHHHHHHHHHHcCCCCcEEEEcCC
Q 033299 68 ACDLKIRAERQKLMETVCSEFDGKLNILVSSSA 100 (122)
Q Consensus 68 ~~Dv~~~~~~~~~~~~~~~~~~g~id~lv~~ag 100 (122)
...+ +.+.+.+++ ...|+||.+.-
T Consensus 408 ~~~I-~~en~~~fl--------~~~DiVVDa~D 431 (989)
T PRK14852 408 PEGV-AAETIDAFL--------KDVDLLVDGID 431 (989)
T ss_pred ecCC-CHHHHHHHh--------hCCCEEEECCC
Confidence 5555 334455544 34677776443
No 484
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.67 E-value=0.049 Score=38.24 Aligned_cols=43 Identities=28% Similarity=0.443 Sum_probs=37.2
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELN 51 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~ 51 (122)
..+.||.++|.|.+.-+|.-++..|..+|+.|.++.+....+.
T Consensus 155 i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~ 197 (285)
T PRK10792 155 IDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLR 197 (285)
T ss_pred CCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHH
Confidence 3678999999999999999999999999999999987654443
No 485
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=95.67 E-value=0.12 Score=36.67 Aligned_cols=65 Identities=23% Similarity=0.226 Sum_probs=45.1
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHH-----HHHHHHhcCCeEEEEeecCCCHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNE-----RIQEWKSKGLKVSGSACDLKIRA 75 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~-----~~~~~~~~~~~~~~~~~Dv~~~~ 75 (122)
..+.||++.|.|. |.||+++++.+...|++|+.+++....... .++++-. ...+..+.+-++...
T Consensus 141 ~~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell~-~sDvv~lh~Plt~~T 210 (311)
T PRK08410 141 GEIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELLK-TSDIISIHAPLNEKT 210 (311)
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHhh-cCCEEEEeCCCCchh
Confidence 3688999999998 999999999999999999998875321000 1122211 235777777777643
No 486
>PLN02928 oxidoreductase family protein
Probab=95.65 E-value=0.15 Score=36.74 Aligned_cols=36 Identities=28% Similarity=0.463 Sum_probs=33.4
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecC
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRN 46 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~ 46 (122)
.+.||++.|.|. |.||+++++.+...|++|+.++|+
T Consensus 156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~ 191 (347)
T PLN02928 156 TLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRS 191 (347)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCC
Confidence 578999999998 999999999999999999999886
No 487
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=95.65 E-value=0.18 Score=34.11 Aligned_cols=42 Identities=19% Similarity=0.313 Sum_probs=34.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNER 53 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 53 (122)
.+.+++|.|+++++|..++......|.+|+.+.++.++.+..
T Consensus 104 ~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~ 145 (288)
T smart00829 104 PGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFL 145 (288)
T ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 467899999999999999888888899999888887665443
No 488
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=95.64 E-value=0.079 Score=35.99 Aligned_cols=60 Identities=13% Similarity=-0.026 Sum_probs=44.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHHHHH-------------hcCCeEEEEeecCCCH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWK-------------SKGLKVSGSACDLKIR 74 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~-------------~~~~~~~~~~~Dv~~~ 74 (122)
.+.++++-||+.|. =+..|+.+|++|+.++-++...+...++.. ..+.++.++.+|+-+.
T Consensus 43 ~~~rvLvPgCGkg~---D~~~LA~~G~~V~GvDlS~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~gD~f~l 115 (226)
T PRK13256 43 DSSVCLIPMCGCSI---DMLFFLSKGVKVIGIELSEKAVLSFFSQNTINYEVIHGNDYKLYKGDDIEIYVADIFNL 115 (226)
T ss_pred CCCeEEEeCCCChH---HHHHHHhCCCcEEEEecCHHHHHHHHHHcCCCcceecccccceeccCceEEEEccCcCC
Confidence 35799999998873 456788899999999999988777655321 1134678888888764
No 489
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=95.64 E-value=0.26 Score=36.39 Aligned_cols=88 Identities=11% Similarity=-0.034 Sum_probs=57.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHH---------------HHHHhc----------CCeEEEEe
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERI---------------QEWKSK----------GLKVSGSA 68 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~---------------~~~~~~----------~~~~~~~~ 68 (122)
+.+-|.|. |.+|..++..|++.|++|+.+++++++.+.+. .+.... ...+.++-
T Consensus 4 ~kI~VIGl-G~~G~~~A~~La~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~~~~~aDvvii~ 82 (415)
T PRK11064 4 ETISVIGL-GYIGLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLDMVVKTAVEGGYLRATTTPEPADAFLIA 82 (415)
T ss_pred cEEEEECc-chhhHHHHHHHHhCCCEEEEEeCCHHHHHHHHCCCCCcCCCCHHHHHHHHhhcCceeeecccccCCEEEEE
Confidence 45677776 88999999999999999999999988766531 101011 12333333
Q ss_pred ecC-------CCHHHHHHHHHHHHHHcCCCCcEEEEcCCCCC
Q 033299 69 CDL-------KIRAERQKLMETVCSEFDGKLNILVSSSAKVP 103 (122)
Q Consensus 69 ~Dv-------~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~ 103 (122)
... .|.+.+..+++.+.+.. .+=.++|..+.+.+
T Consensus 83 vptp~~~~~~~dl~~v~~~~~~i~~~l-~~g~iVI~~STv~p 123 (415)
T PRK11064 83 VPTPFKGDHEPDLTYVEAAAKSIAPVL-KKGDLVILESTSPV 123 (415)
T ss_pred cCCCCCCCCCcChHHHHHHHHHHHHhC-CCCCEEEEeCCCCC
Confidence 332 24477888888887776 44466776666553
No 490
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=95.64 E-value=0.17 Score=34.97 Aligned_cols=38 Identities=26% Similarity=0.298 Sum_probs=30.8
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCe-EEEeecChhHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAI-VHTCSRNETEL 50 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~-v~~~~r~~~~~ 50 (122)
.+++++|.|+ |++|...+..+...|.+ |++++++.++.
T Consensus 120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~ 158 (280)
T TIGR03366 120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRR 158 (280)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 5789999986 89999998888788976 88887776654
No 491
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=95.62 E-value=0.21 Score=35.28 Aligned_cols=40 Identities=25% Similarity=0.321 Sum_probs=33.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNE 52 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~ 52 (122)
.+++++|.| ++++|..++..+...|.+|+.+.++.++.+.
T Consensus 163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~ 202 (333)
T cd08296 163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADL 202 (333)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHH
Confidence 467899999 7999999998888889999999888765443
No 492
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=95.62 E-value=0.24 Score=34.98 Aligned_cols=36 Identities=39% Similarity=0.534 Sum_probs=30.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecCh
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNE 47 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~ 47 (122)
.+.+++|.|+++++|..++......|++|+.+.++.
T Consensus 177 ~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~ 212 (350)
T cd08274 177 AGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA 212 (350)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch
Confidence 467999999999999999998888999988777553
No 493
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=95.61 E-value=0.34 Score=34.08 Aligned_cols=84 Identities=13% Similarity=0.105 Sum_probs=52.6
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHHHHH----------HHHhc--CCeEEEEeecCCCHHHHHHHHHH
Q 033299 16 ALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQ----------EWKSK--GLKVSGSACDLKIRAERQKLMET 83 (122)
Q Consensus 16 ~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~----------~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~ 83 (122)
+-+.| .|-+|..+++.|.+.|++|.+.+|++++.+...+ ++... ..++. ..=+.+.+.+..++..
T Consensus 3 Ig~IG-lG~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~~~~e~~~~~~~~dvv--i~~v~~~~~~~~v~~~ 79 (301)
T PRK09599 3 LGMIG-LGRMGGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATGADSLEELVAKLPAPRVV--WLMVPAGEITDATIDE 79 (301)
T ss_pred EEEEc-ccHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCeecCCHHHHHhhcCCCCEE--EEEecCCcHHHHHHHH
Confidence 44555 4889999999999999999999999877665422 11110 01222 2223444456667766
Q ss_pred HHHHcCCCCcEEEEcCCCCC
Q 033299 84 VCSEFDGKLNILVSSSAKVP 103 (122)
Q Consensus 84 ~~~~~~g~id~lv~~ag~~~ 103 (122)
+.... .+=+++|+.....+
T Consensus 80 l~~~l-~~g~ivid~st~~~ 98 (301)
T PRK09599 80 LAPLL-SPGDIVIDGGNSYY 98 (301)
T ss_pred HHhhC-CCCCEEEeCCCCCh
Confidence 66655 34467777665554
No 494
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=95.61 E-value=0.3 Score=35.06 Aligned_cols=41 Identities=22% Similarity=0.243 Sum_probs=32.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeecChhHHHHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRNETELNER 53 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r~~~~~~~~ 53 (122)
.+.+++|.|+ |++|...+......|. +|+.++++.++.+..
T Consensus 184 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~ 225 (365)
T cd08277 184 PGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKA 225 (365)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence 4678999975 9999999887778898 688888877665433
No 495
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.61 E-value=0.067 Score=37.54 Aligned_cols=43 Identities=21% Similarity=0.330 Sum_probs=36.8
Q ss_pred cccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHH
Q 033299 9 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELN 51 (122)
Q Consensus 9 ~~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~ 51 (122)
..+.||.++|.|.|.-+|+-++..|..+++.|.++......+.
T Consensus 154 i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~ 196 (284)
T PRK14190 154 IDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLA 196 (284)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHH
Confidence 3578999999999999999999999999999998876544333
No 496
>PRK08328 hypothetical protein; Provisional
Probab=95.60 E-value=0.084 Score=35.87 Aligned_cols=35 Identities=26% Similarity=0.314 Sum_probs=29.6
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeec
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSR 45 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r 45 (122)
++++.+++|.|+ ||+|.++++.|+..|. ++.+++.
T Consensus 24 ~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~ 59 (231)
T PRK08328 24 KLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDE 59 (231)
T ss_pred HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence 467788999988 8999999999999994 6777764
No 497
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=95.58 E-value=0.17 Score=35.67 Aligned_cols=39 Identities=38% Similarity=0.531 Sum_probs=31.5
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCC-CeEEEeecChhHHH
Q 033299 12 KGMTALVTGGTRGIGHAIVEELTAFG-AIVHTCSRNETELN 51 (122)
Q Consensus 12 ~~~~~litG~~~~ig~~~~~~l~~~g-~~v~~~~r~~~~~~ 51 (122)
.+++++|.|+ +++|..+++.+...| .+|+++.++.++.+
T Consensus 167 ~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~ 206 (340)
T cd05284 167 PGSTVVVIGV-GGLGHIAVQILRALTPATVIAVDRSEEALK 206 (340)
T ss_pred CCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEeCCHHHHH
Confidence 4678999994 569999988888888 78988888876544
No 498
>PRK06153 hypothetical protein; Provisional
Probab=95.53 E-value=0.31 Score=35.75 Aligned_cols=35 Identities=20% Similarity=0.291 Sum_probs=29.5
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeec
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSR 45 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~-~v~~~~r 45 (122)
++++.+++|.|+ ||+|..++..|++.|. ++++++.
T Consensus 173 kL~~~~VaIVG~-GG~GS~Va~~LAR~GVgeI~LVD~ 208 (393)
T PRK06153 173 KLEGQRIAIIGL-GGTGSYILDLVAKTPVREIHLFDG 208 (393)
T ss_pred HHhhCcEEEEcC-CccHHHHHHHHHHcCCCEEEEECC
Confidence 567889999998 9999999999999984 6777754
No 499
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=95.52 E-value=0.065 Score=39.57 Aligned_cols=41 Identities=22% Similarity=0.237 Sum_probs=35.4
Q ss_pred ccCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHH
Q 033299 10 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELN 51 (122)
Q Consensus 10 ~~~~~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~ 51 (122)
.+.|++++|.|+ |.||..+++.+...|++|+++++++.+..
T Consensus 199 ~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~ 239 (413)
T cd00401 199 MIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICAL 239 (413)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHH
Confidence 357899999998 78999999999999999999988876543
No 500
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.52 E-value=0.33 Score=34.76 Aligned_cols=38 Identities=21% Similarity=0.087 Sum_probs=31.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeecChhHHHH
Q 033299 14 MTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNE 52 (122)
Q Consensus 14 ~~~litG~~~~ig~~~~~~l~~~g~~v~~~~r~~~~~~~ 52 (122)
+.+-|.|+ |-+|..++..++..|++|.+.+++++..+.
T Consensus 8 ~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~ 45 (321)
T PRK07066 8 KTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAA 45 (321)
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHH
Confidence 45667776 889999999999999999999998765444
Done!