BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033305
(122 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|296085848|emb|CBI31172.3| unnamed protein product [Vitis vinifera]
Length = 644
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 92/132 (69%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
++ N+ YV+LSN Y+AA RWKD +LR+++R+KGMKK PACSW EIK
Sbjct: 470 VDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDK 529
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHPY RINEALK L E+ME+EGYV T E LHDVE+EQK+ LL HS R AI FG IST
Sbjct: 530 SHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIIST 589
Query: 111 PDGRTIRLINNL 122
P G TIR+ NL
Sbjct: 590 PAGTTIRVTKNL 601
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 92/132 (69%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
++ N+ YV+LSN Y+AA RWKD +LR+++R+KGMKK PACSW EIK
Sbjct: 535 VDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDK 594
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHPY RINEALK L E+ME+EGYV T E LHDVE+EQK+ LL HS R AI FG IST
Sbjct: 595 SHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIIST 654
Query: 111 PDGRTIRLINNL 122
P G TIR+ NL
Sbjct: 655 PAGTTIRVTKNL 666
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 92/132 (69%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
++ N+ YV+LSN Y+AA RWKD +LR+++R+KGMKK PACSW EIK
Sbjct: 495 VDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDK 554
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHPY RINEALK L E+ME+EGYV T E LHDVE+EQK+ LL HS R AI FG IST
Sbjct: 555 SHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIIST 614
Query: 111 PDGRTIRLINNL 122
P G TIR+ NL
Sbjct: 615 PAGTTIRVTKNL 626
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 147 bits (371), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 71/132 (53%), Positives = 92/132 (69%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++ NM YV++SN Y+AA+RWKD ARLR+ +R KG+KKTPACSW E+ K
Sbjct: 527 VDSENMGAYVLMSNIYSAAQRWKDAARLRIHMRKKGLKKTPACSWIEVGNQVHTFMAGDK 586
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHPY +IN+AL L E+ME+EGYV T + LHDV++E K+ LLH HS R AI +G IST
Sbjct: 587 SHPYYDKINKALDVLLEQMEKEGYVIDTNQVLHDVDEELKRELLHNHSERLAIAYGIIST 646
Query: 111 PDGRTIRLINNL 122
G TIR+I N+
Sbjct: 647 TAGTTIRVIKNI 658
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 92/133 (69%), Gaps = 11/133 (8%)
Query: 1 MINLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI----------- 49
+++ NM +VI+SN Y+AA+RW+D A+LRV +R G+KKTPACSW E+
Sbjct: 499 LVDPGNMGAHVIMSNIYSAAQRWRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGD 558
Query: 50 KSHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIS 109
KSHPY +INEAL L E+ME+EGYV T E LHDV++E K++LL HS R AI FG IS
Sbjct: 559 KSHPYYDKINEALNILLEQMEKEGYVLDTNEVLHDVDEEHKRDLLRTHSERLAIAFGIIS 618
Query: 110 TPDGRTIRLINNL 122
T G TIR+I N+
Sbjct: 619 TTSGTTIRVIKNI 631
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/132 (52%), Positives = 89/132 (67%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
++ NN Y++L+N Y+AARRWK+ A+ R S+R G++KTPACSW E+K
Sbjct: 531 VDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDE 590
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP +I EA++ L E ME+EGYVP T E HDVE+EQKK L+ HS R AIVFG I+T
Sbjct: 591 SHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINT 650
Query: 111 PDGRTIRLINNL 122
P G TIR+ NL
Sbjct: 651 PAGMTIRVTKNL 662
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/132 (52%), Positives = 89/132 (67%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
++ NN Y++L+N Y+AARRWK+ A+ R S+R G++KTPACSW E+K
Sbjct: 538 VDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDE 597
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP +I EA++ L E ME+EGYVP T E HDVE+EQKK L+ HS R AIVFG I+T
Sbjct: 598 SHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINT 657
Query: 111 PDGRTIRLINNL 122
P G TIR+ NL
Sbjct: 658 PAGMTIRVTKNL 669
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 88/132 (66%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
++ N Y++L+N Y+AARRWK+ A+ R S+R G++KTPACSW E++
Sbjct: 599 VDPKNTGAYILLANIYSAARRWKEAAKWRASLRRTGIRKTPACSWIEVRNKVYAFMAGDE 658
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP +I EA++ L E ME+EGYVP T E HDVE+EQKK L+ HS R AIVFG I+T
Sbjct: 659 SHPCYEKIREAMEVLMELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINT 718
Query: 111 PDGRTIRLINNL 122
P G TIR+ NL
Sbjct: 719 PAGTTIRVTKNL 730
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/132 (48%), Positives = 84/132 (63%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
I+ NM YV++ N YA+ RWK+ A+LR+ VR KG++K PACSW E+K
Sbjct: 505 IDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDR 564
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP RINE LK + E+ME+EGYV T LHDV++E K+ LL HS R A+ FG I+T
Sbjct: 565 SHPSMDRINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINT 624
Query: 111 PDGRTIRLINNL 122
G TIR+ N+
Sbjct: 625 EPGTTIRVTKNI 636
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 86/128 (67%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPY 54
+M +VILSN Y+A+ RW + A+LR S+R KGMKK PACSW E+K SHP+
Sbjct: 473 SMGSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPW 532
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
RI +AL E+M ++GYVP ++ L D+E+EQK+ +L HS + AIVFG ISTP G
Sbjct: 533 YDRIIDALNVYSEQMIRQGYVPNMEDVLQDIEEEQKREVLCGHSEKLAIVFGIISTPPGT 592
Query: 115 TIRLINNL 122
TIR++ NL
Sbjct: 593 TIRVMKNL 600
>gi|218199901|gb|EEC82328.1| hypothetical protein OsI_26611 [Oryza sativa Indica Group]
Length = 507
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 86/128 (67%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPY 54
+M +VILSN Y+A+ RW + A+LR S+R KGMKK PACSW E+K SHP+
Sbjct: 275 SMGSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPW 334
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
RI +AL E+M ++GYVP ++ L D+E+EQK+ +L HS + AIVFG ISTP G
Sbjct: 335 YDRIIDALNVYSEQMIRQGYVPNMEDVLQDIEEEQKREVLCGHSEKLAIVFGIISTPPGT 394
Query: 115 TIRLINNL 122
TIR++ NL
Sbjct: 395 TIRVMKNL 402
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/132 (46%), Positives = 84/132 (63%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
++ NM YV++ N YA+ RWK+ A+LR+ +R KG++K PACSW E+K
Sbjct: 541 VDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDR 600
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP +INE LK + E+ME+EGYV T LHDV++E K+ LL HS R A+ FG I+T
Sbjct: 601 SHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINT 660
Query: 111 PDGRTIRLINNL 122
G TIR+ N+
Sbjct: 661 EPGTTIRVTKNI 672
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 84/128 (65%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPY 54
+M ++ILSN Y+++ RW + A LR S+R KGM+K PACSW E+K SHP+
Sbjct: 476 SMGSHIILSNTYSSSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPW 535
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
RI +AL E+M ++GYVP T + D+E+EQK ++L HS + AIVFG ISTP G
Sbjct: 536 YERIIDALNVFSEQMVRQGYVPNTDDVFQDIEEEQKNSVLCGHSEKLAIVFGIISTPPGT 595
Query: 115 TIRLINNL 122
TIR++ NL
Sbjct: 596 TIRVMKNL 603
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 80/124 (64%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
+V+LSN Y+A+ RW + A LR S+R KGMKK PACSW E+KS HP+ RI
Sbjct: 477 HVVLSNMYSASGRWNEAAHLRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRI 536
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+AL E+M +EG+VP T++ D+E+E K +L HS + AIVFG ISTP G IR+
Sbjct: 537 IDALNAFSEQMAREGHVPNTEDVFQDIEEEHKSYVLCGHSEKLAIVFGIISTPAGTKIRV 596
Query: 119 INNL 122
+ NL
Sbjct: 597 MKNL 600
>gi|219362609|ref|NP_001136847.1| uncharacterized protein LOC100216998 [Zea mays]
gi|194697336|gb|ACF82752.1| unknown [Zea mays]
Length = 210
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 80/124 (64%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
+V+LSN Y+A+ RW + A LR S+R KGMKK PACSW E+KS HP+ RI
Sbjct: 44 HVVLSNMYSASGRWNEAAHLRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRI 103
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+AL E+M +EG+VP T++ D+E+E K +L HS + AIVFG ISTP G IR+
Sbjct: 104 IDALNAFSEQMAREGHVPNTEDVFQDIEEEHKSYVLCGHSEKLAIVFGIISTPAGTKIRV 163
Query: 119 INNL 122
+ NL
Sbjct: 164 MKNL 167
>gi|147811204|emb|CAN74558.1| hypothetical protein VITISV_014799 [Vitis vinifera]
Length = 405
Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 86/129 (66%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HP 53
+N +YV+LSN YAA+ RW D R+R+ +R++G+KK P SW E+++ HP
Sbjct: 222 DNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHP 281
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
R RI L++L +M++EGYV +TK LHDVE+E+K ++L YHS + A+ FG ++ P G
Sbjct: 282 ERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAG 341
Query: 114 RTIRLINNL 122
R IR+I NL
Sbjct: 342 RPIRVIKNL 350
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 86/129 (66%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HP 53
+N +YV+LSN YAA+ RW D R+R+ +R++G+KK P SW E+++ HP
Sbjct: 595 DNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHP 654
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
R RI L++L +M++EGYV +TK LHDVE+E+K ++L YHS + A+ FG ++ P G
Sbjct: 655 ERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAG 714
Query: 114 RTIRLINNL 122
R IR+I NL
Sbjct: 715 RPIRVIKNL 723
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 86/129 (66%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HP 53
+N +YV+LSN YAA+ RW D R+R+ +R++G+KK P SW E+++ HP
Sbjct: 514 DNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHP 573
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
R RI L++L +M++EGYV +TK LHDVE+E+K ++L YHS + A+ FG ++ P G
Sbjct: 574 ERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAG 633
Query: 114 RTIRLINNL 122
R IR+I NL
Sbjct: 634 RPIRVIKNL 642
>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 79/128 (61%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPY 54
N YV+LSN YAAA RW D ++R ++++ +KK P CSW E++ SHP
Sbjct: 200 NPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSWIEVQNKVHPFIVGDSSHPQ 259
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
I E L+ L +M+ GY+P T LHDVE+EQK+ +L +HS + AI FG ISTP G
Sbjct: 260 IEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEWILGHHSEKLAIAFGIISTPPGT 319
Query: 115 TIRLINNL 122
TIR++ NL
Sbjct: 320 TIRVVKNL 327
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 78/129 (60%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHP 53
NN Y +LSN YA A RWKD R+R +R+KG+KK P CSW E K+HP
Sbjct: 679 NNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFVGDKTHP 738
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+ I + L D +R++ GYVP T ALHDV+DE+K +LL HS + A+ +G ++TP G
Sbjct: 739 HAKEIYQVLSDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQG 798
Query: 114 RTIRLINNL 122
IR+ NL
Sbjct: 799 AAIRITKNL 807
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 86/129 (66%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HP 53
+N +YV+LSN YAA+ RW D +++R+ +R G++KTP SW E+++ HP
Sbjct: 579 HNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVGDCFHP 638
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+ RI L++L +M+ EGYV +TK LHDVE+E+KK++L YHS + A+ FG ++ P G
Sbjct: 639 EKGRIYAFLEELDLKMKHEGYVSSTKLVLHDVEEEEKKHMLKYHSEKLAVAFGILTMPSG 698
Query: 114 RTIRLINNL 122
+ IR++ NL
Sbjct: 699 KPIRVMKNL 707
>gi|294461906|gb|ADE76509.1| unknown [Picea sitchensis]
Length = 246
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 80/129 (62%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHP 53
+N YV+LSN YAAA RW D A++R ++++G++K P CSW E+K SHP
Sbjct: 75 HNAAKYVLLSNIYAAAGRWDDVAKVRKIMKDRGVQKQPGCSWIEVKNKVHTFMVEDKSHP 134
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
I L++L +ME GYVP T LHDVE EQK++ L++HS + AI FG IST G
Sbjct: 135 QTEEIYSTLEELARQMEAAGYVPDTNFVLHDVEMEQKEHSLYHHSEKLAIAFGLISTLPG 194
Query: 114 RTIRLINNL 122
+R+I NL
Sbjct: 195 LPVRIIKNL 203
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 79/129 (61%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHP 53
N YV+LSN YA+A RW D +R+RV ++ G+ K P SW ++ SHP
Sbjct: 504 NCSSAYVLLSNIYASAGRWADVSRMRVKMKQGGLVKQPGSSWVVLRGKKHEFLSADRSHP 563
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
RI E L L +++++ GYVP K ALHDVEDEQK+ +L +HS R AI FG +ST +G
Sbjct: 564 LSERIYEKLDWLGKKLKEFGYVPDQKFALHDVEDEQKEEMLSFHSERLAIAFGLVSTVEG 623
Query: 114 RTIRLINNL 122
TI ++ NL
Sbjct: 624 STITVMKNL 632
>gi|367064031|gb|AEX12062.1| hypothetical protein 0_18789_01 [Pinus taeda]
Length = 161
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 80/132 (60%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++ N YV+LSN YAA RW D R+R ++++G++K P SW E+ K
Sbjct: 28 LDSKNASYYVLLSNLYAACSRWDDVKRVRKIMKDQGIQKMPGSSWIEVNGKVYAFLVGDK 87
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP +I + L+ LF +M GYVP ALHDVE+EQK+N+L +HS + AI FG ++T
Sbjct: 88 SHPQSEKIYDMLEKLFGKMMDAGYVPEIDFALHDVEEEQKENILGHHSEKLAIAFGLMNT 147
Query: 111 PDGRTIRLINNL 122
G TIR+ NL
Sbjct: 148 SCGTTIRITKNL 159
>gi|367064005|gb|AEX12049.1| hypothetical protein 0_18789_01 [Pinus taeda]
gi|367064011|gb|AEX12052.1| hypothetical protein 0_18789_01 [Pinus taeda]
gi|367064019|gb|AEX12056.1| hypothetical protein 0_18789_01 [Pinus taeda]
gi|367064021|gb|AEX12057.1| hypothetical protein 0_18789_01 [Pinus taeda]
gi|367064023|gb|AEX12058.1| hypothetical protein 0_18789_01 [Pinus taeda]
gi|367064037|gb|AEX12065.1| hypothetical protein 0_18789_01 [Pinus radiata]
Length = 161
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 80/132 (60%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++ N YV+LSN YAA RW D R+R ++++G++K P SW E+ K
Sbjct: 28 LDSKNASYYVLLSNLYAACSRWDDVKRVRKIMKDQGIQKMPGSSWIEVNGKVYAFLVGDK 87
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP +I + L+ LF +M GYVP ALHDVE+EQK+N+L +HS + AI FG ++T
Sbjct: 88 SHPQSEKIYDMLEKLFGKMMDAGYVPEIDFALHDVEEEQKENILGHHSEKLAIAFGLMNT 147
Query: 111 PDGRTIRLINNL 122
G TIR+ NL
Sbjct: 148 SCGTTIRITKNL 159
>gi|297794613|ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311026|gb|EFH41450.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 80/122 (65%), Gaps = 9/122 (7%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI--KSH-------PYRLRINE 60
YV+LSN YA+A RW ++LRV ++ KG+ K P SW I K H P+ LRI E
Sbjct: 533 YVLLSNIYASAGRWSSVSKLRVKMKQKGIMKKPGSSWVVIRGKKHEFFSGDRPHCLRIFE 592
Query: 61 ALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLIN 120
L+ L E++++ GYVP + ALHDVEDEQK+ +L YHS R AI FG I+T +G T+ ++
Sbjct: 593 KLEFLREKLKELGYVPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSTVTVMK 652
Query: 121 NL 122
NL
Sbjct: 653 NL 654
>gi|367064015|gb|AEX12054.1| hypothetical protein 0_18789_01 [Pinus taeda]
Length = 161
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 80/132 (60%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++ N YV+LSN YAA RW D R+R ++++G++K P SW E+ K
Sbjct: 28 LDSKNPSYYVLLSNIYAACSRWDDVKRVRKIMKDQGIQKMPGSSWIEVNGKVYAFLVGDK 87
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP +I + L+ LF +M GYVP ALHDVE+EQK+N+L +HS + AI FG ++T
Sbjct: 88 SHPQSEKIYDMLEKLFGKMMDAGYVPEIDFALHDVEEEQKENILGHHSEKLAIAFGLMNT 147
Query: 111 PDGRTIRLINNL 122
G TIR+ NL
Sbjct: 148 SCGTTIRITKNL 159
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 84/129 (65%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHP 53
+N +YV+LSN YAA+ RW++ +R +R+KG+KK P SW EI+ SHP
Sbjct: 605 DNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHP 664
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
RI L++L ++++G+V +TK LHDVE+E+K+++L YHS + A+ FG +S P G
Sbjct: 665 EAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPG 724
Query: 114 RTIRLINNL 122
R IR+I NL
Sbjct: 725 RPIRVIKNL 733
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 84/129 (65%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHP 53
+N +YV+LSN YAA+ RW++ +R +R+KG+KK P SW EI+ SHP
Sbjct: 605 DNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHP 664
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
RI L++L ++++G+V +TK LHDVE+E+K+++L YHS + A+ FG +S P G
Sbjct: 665 EAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPG 724
Query: 114 RTIRLINNL 122
R IR+I NL
Sbjct: 725 RPIRVIKNL 733
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 76/124 (61%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
Y +LSN YA A RWKD R+R +R+KG+KK P CSW E K+HP+ I
Sbjct: 684 YTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEI 743
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L D +R++ GYVP T ALHDV+DE+K +LL HS + A+ +G ++TP G IR+
Sbjct: 744 YQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRI 803
Query: 119 INNL 122
NL
Sbjct: 804 TKNL 807
>gi|367064007|gb|AEX12050.1| hypothetical protein 0_18789_01 [Pinus taeda]
gi|367064009|gb|AEX12051.1| hypothetical protein 0_18789_01 [Pinus taeda]
gi|367064013|gb|AEX12053.1| hypothetical protein 0_18789_01 [Pinus taeda]
gi|367064017|gb|AEX12055.1| hypothetical protein 0_18789_01 [Pinus taeda]
gi|367064025|gb|AEX12059.1| hypothetical protein 0_18789_01 [Pinus taeda]
gi|367064027|gb|AEX12060.1| hypothetical protein 0_18789_01 [Pinus taeda]
gi|367064033|gb|AEX12063.1| hypothetical protein 0_18789_01 [Pinus taeda]
gi|367064035|gb|AEX12064.1| hypothetical protein 0_18789_01 [Pinus taeda]
Length = 161
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 80/132 (60%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++ N YV+LSN YAA RW D R+R ++++G++K P SW E+ K
Sbjct: 28 LDSKNPSYYVLLSNIYAACSRWDDVKRVRKIMKDEGIQKMPGSSWIEVNGKVYAFLVGDK 87
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP +I + L+ LF +M GYVP ALHDVE+EQK+N+L +HS + AI FG ++T
Sbjct: 88 SHPQSEKIYDMLEKLFGKMMDAGYVPEIDFALHDVEEEQKENILGHHSEKLAIAFGLMNT 147
Query: 111 PDGRTIRLINNL 122
G TIR+ NL
Sbjct: 148 SCGTTIRITKNL 159
>gi|367064029|gb|AEX12061.1| hypothetical protein 0_18789_01 [Pinus taeda]
Length = 161
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 80/132 (60%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++ N YV+LSN YAA RW D R+R ++++G++K P SW E+ K
Sbjct: 28 LDSKNPSYYVLLSNIYAACSRWDDVKRVRKIMKDEGIQKMPGSSWIEVNGKVYAFLVGDK 87
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP +I + L+ LF +M GYVP ALHDVE+EQK+N+L +HS + AI FG ++T
Sbjct: 88 SHPQSEKIYDMLEKLFGKMMDAGYVPEIDFALHDVEEEQKENILGHHSEKLAIAFGLMNT 147
Query: 111 PDGRTIRLINNL 122
G TIR+ NL
Sbjct: 148 SCGTTIRITKNL 159
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 82/128 (64%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPY 54
N +YV+LSN YAA+ RW D ++R +R+ G++K P SW E++ SHP
Sbjct: 596 NSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPE 655
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+ RI L++L +M +EGYV TK LHDVE+E+K+++L YHS + A+ FG ++ P GR
Sbjct: 656 KERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGR 715
Query: 115 TIRLINNL 122
IR++ NL
Sbjct: 716 PIRVMKNL 723
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 82/128 (64%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPY 54
N +YV+LSN YAA+ RW D ++R +R+ G++K P SW E++ SHP
Sbjct: 596 NSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPE 655
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+ RI L++L +M +EGYV TK LHDVE+E+K+++L YHS + A+ FG ++ P GR
Sbjct: 656 KERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGR 715
Query: 115 TIRLINNL 122
IR++ NL
Sbjct: 716 PIRVMKNL 723
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 77/132 (58%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
I N YV L+N YA A W + A++R ++ ++G+ K P SW IK
Sbjct: 502 IEPENPATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVHVFLVGDD 561
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP INE L L +RM++EG+VP T LHDVEDEQK+ L YHS + A+ FG IST
Sbjct: 562 SHPKSKEINEFLGKLSKRMKEEGFVPDTNFVLHDVEDEQKEQNLSYHSEKLAVAFGIIST 621
Query: 111 PDGRTIRLINNL 122
P+G I++ NL
Sbjct: 622 PEGTPIKVFKNL 633
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 77/124 (62%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y +LSN YA AR WKD AR+R ++N G+KK P CSW + + SHP +I
Sbjct: 705 YTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQI 764
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+DL +R++ GYVP + ALHDV+DE+K +LL HS + A+ +G ++T G IR+
Sbjct: 765 YDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRI 824
Query: 119 INNL 122
NL
Sbjct: 825 TKNL 828
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 77/124 (62%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y +LSN YA AR WKD AR+R ++N G+KK P CSW + + SHP +I
Sbjct: 686 YTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQI 745
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+DL +R++ GYVP + ALHDV+DE+K +LL HS + A+ +G ++T G IR+
Sbjct: 746 YDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRI 805
Query: 119 INNL 122
NL
Sbjct: 806 TKNL 809
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 78/124 (62%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA+A RW D +R+R ++ +G+ K P SW IK SHP RI
Sbjct: 510 YVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRI 569
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+ L ++++ GYVP + ALHDVEDEQK+ +L YHS R AI FG IST +G TI +
Sbjct: 570 YQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITV 629
Query: 119 INNL 122
+ NL
Sbjct: 630 MKNL 633
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 82/129 (63%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHP 53
+N +Y++LS YAA+ RW D ++R+ +RNKG+KK P SW E++ SHP
Sbjct: 381 HNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGVKKVPGYSWLEVQNKIHTFKVGDTSHP 440
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+ +I L+++ +++QEGY+ +T HDVE+E+K ++L YHS + A+ +G + P G
Sbjct: 441 HTDKIYTFLEEMDLKLKQEGYISSTNLVFHDVEEEEKVHMLKYHSEKLAVAYGILYIPAG 500
Query: 114 RTIRLINNL 122
R IR+I NL
Sbjct: 501 RPIRVIKNL 509
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 78/124 (62%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA+A RW D +R+R ++ +G+ K P SW IK SHP RI
Sbjct: 494 YVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRI 553
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+ L ++++ GYVP + ALHDVEDEQK+ +L YHS R AI FG IST +G TI +
Sbjct: 554 YQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITV 613
Query: 119 INNL 122
+ NL
Sbjct: 614 MKNL 617
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 79/128 (61%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPY 54
N +YV+LSN YA++ RW D +LRV +R+KG+KK P SW EI++ HP
Sbjct: 606 NSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPE 665
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+ I L+DL RM++ GYV T LHDVE+E+K+ ++ YHS R A+ +G + GR
Sbjct: 666 KDEIFAFLEDLDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGR 725
Query: 115 TIRLINNL 122
IR+I NL
Sbjct: 726 PIRVIKNL 733
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 77/124 (62%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y +LSN YA ARRWKD AR+R +++ G++K P CSW + K SHP +I
Sbjct: 689 YTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQI 748
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L DL +R++ GYVP T ALHDV+DE+K +LL HS + A+ +G ++T G+ IR+
Sbjct: 749 YNLLLDLIKRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTTAPGQPIRI 808
Query: 119 INNL 122
NL
Sbjct: 809 HKNL 812
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 77/130 (59%), Gaps = 12/130 (9%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK------------SH 52
N + Y++LSN YA+A RW D +++R +R KG+KK P CSW E K SH
Sbjct: 475 NGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGKKGIIHEFFAGDMSH 534
Query: 53 PYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPD 112
P I +AL+DL +R++ GY P +D+ DE+KK LL HS + A+ FG ++T
Sbjct: 535 PKSREIKQALEDLLDRLKYLGYQPNLSSVAYDISDEEKKRLLMSHSEKLALAFGLLTTNA 594
Query: 113 GRTIRLINNL 122
G TIR++ NL
Sbjct: 595 GCTIRIVKNL 604
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 82/128 (64%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPY 54
N +YV+LSN YA++ +W+D ++RV + +G+KK P SW E+++ HP
Sbjct: 460 NAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPE 519
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+ +I L+DL RM++ GYV T LHDVE+E+K+++L YHS + A+ +G ++ P GR
Sbjct: 520 KEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGR 579
Query: 115 TIRLINNL 122
IR+I NL
Sbjct: 580 PIRVIKNL 587
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 82/128 (64%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPY 54
N +YV+LSN YA++ +W+D ++RV + +G+KK P SW E+++ HP
Sbjct: 585 NAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPE 644
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+ +I L+DL RM++ GYV T LHDVE+E+K+++L YHS + A+ +G ++ P GR
Sbjct: 645 KEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGR 704
Query: 115 TIRLINNL 122
IR+I NL
Sbjct: 705 PIRVIKNL 712
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 82/128 (64%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPY 54
N +YV+LSN YA++ +W+D ++RV + +G+KK P SW E+++ HP
Sbjct: 585 NAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPE 644
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+ +I L+DL RM++ GYV T LHDVE+E+K+++L YHS + A+ +G ++ P GR
Sbjct: 645 KEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGR 704
Query: 115 TIRLINNL 122
IR+I NL
Sbjct: 705 PIRVIKNL 712
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 82/128 (64%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPY 54
N +YV+LSN YA++ +W+D ++RV + +G+KK P SW E+++ HP
Sbjct: 585 NAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPE 644
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+ +I L+DL RM++ GYV T LHDVE+E+K+++L YHS + A+ +G ++ P GR
Sbjct: 645 KEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGR 704
Query: 115 TIRLINNL 122
IR+I NL
Sbjct: 705 PIRVIKNL 712
>gi|302753382|ref|XP_002960115.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
gi|300171054|gb|EFJ37654.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
Length = 653
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 79/125 (63%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+L+N YAAA RW D A+LR +R KG+K+ CS E + S+P L I
Sbjct: 486 YVLLNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEI 545
Query: 59 NEALKDLFERM-EQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
L+ L+ RM E+EGYVP T++ HDV D++K+ LL +HS + A+ FG I++P G T+R
Sbjct: 546 RAELERLYSRMKEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGSTLR 605
Query: 118 LINNL 122
+I NL
Sbjct: 606 IIKNL 610
>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
Length = 745
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 79/125 (63%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+L+N YAAA RW D A+LR +R KG+K+ CS E + S+P L I
Sbjct: 578 YVLLNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEI 637
Query: 59 NEALKDLFERM-EQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
L+ L+ RM E+EGYVP T++ HDV D++K+ LL +HS + A+ FG I++P G T+R
Sbjct: 638 RAELERLYSRMKEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGSTLR 697
Query: 118 LINNL 122
+I NL
Sbjct: 698 IIKNL 702
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 79/132 (59%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTE-----------IK 50
+N N Y +LSN YA ARRWKD AR+R ++N G++K P CSW + K
Sbjct: 365 LNSENDGSYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVADK 424
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
+HP +I E L+ L +R++ GYVP T ALHDV+DE+K +LL HS + A+ +G + +
Sbjct: 425 THPQSKQIYEILRSLTQRIKVLGYVPETSFALHDVDDEEKVDLLFEHSEKLALAYGILIS 484
Query: 111 PDGRTIRLINNL 122
G IR+ NL
Sbjct: 485 APGAPIRITKNL 496
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 79/128 (61%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPY 54
N +YV+LSN YA++ RW D +LRV +R+KG+KK P SW EI++ HP
Sbjct: 611 NSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPE 670
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+ I L++L RM++ GYV T LHDVE+E+K+ ++ YHS R A+ +G + GR
Sbjct: 671 KDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGR 730
Query: 115 TIRLINNL 122
IR+I NL
Sbjct: 731 PIRVIKNL 738
>gi|147864644|emb|CAN84077.1| hypothetical protein VITISV_032319 [Vitis vinifera]
Length = 228
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 77/130 (59%), Gaps = 12/130 (9%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK------------SH 52
N + Y++LSN YA+A RW D +++R +R KG+KK P CSW E K SH
Sbjct: 15 NGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGKKGIIHEFFAGDMSH 74
Query: 53 PYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPD 112
P I +AL+DL +R++ GY P +D+ DE+KK LL HS + A+ FG ++T
Sbjct: 75 PKSREIKQALEDLLDRLKYLGYQPNLSSVAYDIIDEEKKRLLMSHSEKLALAFGLLTTNA 134
Query: 113 GRTIRLINNL 122
G TIR++ NL
Sbjct: 135 GCTIRIVKNL 144
>gi|302786698|ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
gi|300157279|gb|EFJ23905.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
Length = 485
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 79/132 (59%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++ N Y+ L+N Y+AA+R KD AR+R + +G+KK P CSW E+ K
Sbjct: 311 LDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFIAGDK 370
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
HP R I ++ L +M++ GY TK L DVE+++K+NLL YHS + AI FG IST
Sbjct: 371 MHPQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLIST 430
Query: 111 PDGRTIRLINNL 122
P G +R++ NL
Sbjct: 431 PPGAPLRIVKNL 442
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 81/132 (61%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++ +N YV+LSN YA A+RW+D A+LR ++ KG+KK P CS + +
Sbjct: 621 LDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDR 680
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
+HP +I L+ L+E+M + GYVP T AL DVE+E K+N+L HS + AI FG I+T
Sbjct: 681 THPQSEQIYAMLEILYEQMRKAGYVPNTNLALQDVEEEAKENILSSHSEKLAISFGIINT 740
Query: 111 PDGRTIRLINNL 122
G IR++ NL
Sbjct: 741 SPGIPIRIMKNL 752
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 77/125 (61%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV++SN +AA+ RWKD +R+ ++ G+KK P CSW E+ KSHP +I
Sbjct: 620 YVLISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKI 679
Query: 59 NEALKDLFERMEQEG-YVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
+ L + E++E+EG YVP TK LH+V E+K +L+ HS R AI +G +ST +G IR
Sbjct: 680 YQKLAQITEKLEKEGGYVPQTKLVLHNVGKEEKVQMLYGHSERLAIAYGLMSTSEGTPIR 739
Query: 118 LINNL 122
+ NL
Sbjct: 740 ITKNL 744
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 81/128 (63%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPY 54
N +YV+LSN YAA+ RW D ++R +R G++K SW E+++ HP
Sbjct: 593 NSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPE 652
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+ RI L++L +M +EGYV +TK LHDVE+E+K+++L YHS + A+ FG ++ P GR
Sbjct: 653 KDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGR 712
Query: 115 TIRLINNL 122
IR++ NL
Sbjct: 713 PIRVMKNL 720
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA +RW D A +R ++ N+G+KK P CSW E+ +SHP I
Sbjct: 368 YVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFILGDRSHPQIREI 427
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
N L L ++ GYVP T L D+E EQ ++ L YHS + AIVFG +S P G+TIR+
Sbjct: 428 NIQLNQLIYKLMGVGYVPDTNFVLQDLEGEQMQDSLRYHSEKLAIVFGLMSLPRGQTIRI 487
Query: 119 INNL 122
NL
Sbjct: 488 RKNL 491
>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
Length = 652
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 79/132 (59%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++ N Y+ L+N Y+AA+R KD AR+R + +G+KK P CSW E+ K
Sbjct: 478 LDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFIAGDK 537
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
HP R I ++ L +M++ GY TK L DVE+++K+NLL YHS + AI FG IST
Sbjct: 538 MHPQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLIST 597
Query: 111 PDGRTIRLINNL 122
P G +R++ NL
Sbjct: 598 PPGAPLRIVKNL 609
>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 79/132 (59%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
+N + YV+LSN +A+A+RWKD +++R ++R++ +KK P SW E+K
Sbjct: 388 LNPQDSATYVLLSNIHASAKRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNRVFQFSMGDK 447
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP I+ LK+L E M+ GYVP T HD + E+K+N L HS + AI FG ++
Sbjct: 448 SHPMSEEIDLYLKELMEEMKLRGYVPDTATVFHDTDSEEKENSLVNHSEKLAIAFGLMNI 507
Query: 111 PDGRTIRLINNL 122
P G IR++ NL
Sbjct: 508 PPGSPIRVMKNL 519
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y ++SN YA ARRWKD AR+R ++ G+KK P CSW + K SHP I
Sbjct: 720 YTLISNIYATARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEI 779
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L R++ GYVP T ALHDV+DE+K NLL HS + A+ +G ++T G IR+
Sbjct: 780 YSLLERLIGRIKVMGYVPETNFALHDVDDEEKNNLLTEHSEKLALAYGLLTTSPGCPIRI 839
Query: 119 INNL 122
NL
Sbjct: 840 TKNL 843
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 75/124 (60%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTE-----------IKSHPYRLRI 58
Y +LSN YA ARRWKD AR+R +++ G+KK P CSW + +SHP +I
Sbjct: 820 YTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQI 879
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L DL +R++ GYVP T ALHDV+DE+K +LL HS + A+ +G ++ IR+
Sbjct: 880 YETLADLIQRIKAIGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTLHPRAPIRI 939
Query: 119 INNL 122
NL
Sbjct: 940 TKNL 943
>gi|144923519|gb|ABP02617.1| Ankyrin; Pentatricopeptide repeat [Medicago truncatula]
Length = 293
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 79/129 (61%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HP 53
NN +YV+LSN YA +W D +LR+ +R G++K P SW E+++ HP
Sbjct: 122 NNAGMYVLLSNLYATLGKWVDVGKLRLKMRQLGIQKIPGYSWVEVQNKIHKFTVGDCFHP 181
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+ RI L+++ +M+ EG+V K LHDVE+E+KK +L YHS + A+ FG ++ P G
Sbjct: 182 EKDRIYAYLEEIDLKMKHEGHVSLVKLVLHDVEEEEKKRMLKYHSEKLAVAFGILTIPAG 241
Query: 114 RTIRLINNL 122
R IR++ NL
Sbjct: 242 RPIRVMKNL 250
>gi|294464140|gb|ADE77588.1| unknown [Picea sitchensis]
Length = 312
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 1 MINLN--NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-------- 50
++NL+ N YV+LSN YAAA RW D A++R ++ K +KK+P CS E+
Sbjct: 135 LLNLDPDNAGYYVLLSNIYAAAGRWDDVAKVRKMMKEKDVKKSPGCSLIEVNNKLHSFVV 194
Query: 51 ---SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGA 107
SHP I L+ L +ME GYVP T LHDVE+E K+N+L HS + AI FG
Sbjct: 195 GDISHPQTEAIYAMLETLARQMEAVGYVPCTDFVLHDVEEEIKENMLFAHSEKLAIAFGL 254
Query: 108 ISTPDGRTIRLINNL 122
IST G +IR+ NL
Sbjct: 255 ISTRSGTSIRITKNL 269
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y ++SN YA ARRWKD AR+R ++ G+KK P CSW + K SHP I
Sbjct: 720 YTLISNIYANARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEI 779
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L R++ GYVP T ALHDV+DE+K NLL HS + A+ +G ++T G IR+
Sbjct: 780 YSLLERLIGRIKVMGYVPETNFALHDVDDEEKNNLLSEHSEKLALAYGLLTTSPGCPIRI 839
Query: 119 INNL 122
NL
Sbjct: 840 TKNL 843
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA ++RW D A +R +++ +G++K P CSW E+ KSHP I
Sbjct: 688 YVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIHAFILGDKSHPQIDEI 747
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
N L R+ GYVP T L D+E EQ+++ L YHS + AIVFG +S P +TIR+
Sbjct: 748 NRQLNQFICRLAGAGYVPDTNFVLQDLEGEQREDSLRYHSEKLAIVFGIMSFPKEKTIRI 807
Query: 119 INNL 122
NL
Sbjct: 808 WKNL 811
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRL-----------RI 58
Y++LSN YA A RWKD A++R + + +KK P +W E+ + YR I
Sbjct: 408 YILLSNIYANAGRWKDVAKIRNLMAKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEI 467
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E LK L +++E GYVP T LHDV++E K +LH HS + AI FG I+TPDG IR+
Sbjct: 468 YEMLKSLSQKLESAGYVPDTNSVLHDVDEEVKLGILHAHSEKLAIAFGLIATPDGTPIRI 527
Query: 119 INNL 122
NL
Sbjct: 528 TKNL 531
>gi|357521583|ref|XP_003631080.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525102|gb|AET05556.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 79/129 (61%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HP 53
NN +YV+LSN YA +W D +LR+ +R G++K P SW E+++ HP
Sbjct: 649 NNAGMYVLLSNLYATLGKWVDVGKLRLKMRQLGIQKIPGYSWVEVQNKIHKFTVGDCFHP 708
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+ RI L+++ +M+ EG+V K LHDVE+E+KK +L YHS + A+ FG ++ P G
Sbjct: 709 EKDRIYAYLEEIDLKMKHEGHVSLVKLVLHDVEEEEKKRMLKYHSEKLAVAFGILTIPAG 768
Query: 114 RTIRLINNL 122
R IR++ NL
Sbjct: 769 RPIRVMKNL 777
>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g46460, mitochondrial; Flags: Precursor
gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 76/122 (62%), Gaps = 9/122 (7%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS---------HPYRLRINE 60
YV+LSN YA+A RW + ++LRV ++ G+ K P SW I+ P+ RI E
Sbjct: 533 YVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPHCSRIYE 592
Query: 61 ALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLIN 120
L+ L E++++ GY P + ALHDVEDEQK+ +L YHS R AI FG I+T +G + ++
Sbjct: 593 KLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMK 652
Query: 121 NL 122
NL
Sbjct: 653 NL 654
>gi|293334473|ref|NP_001170726.1| uncharacterized protein LOC100384813 [Zea mays]
gi|238007188|gb|ACR34629.1| unknown [Zea mays]
Length = 329
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y ++SN YA ARRWKD AR+R ++ G+KK P CSW + K SHP I
Sbjct: 163 YTLISNIYANARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEI 222
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L R++ GYVP T ALHDV+DE+K NLL HS + A+ +G ++T G IR+
Sbjct: 223 YSLLERLIGRIKVMGYVPETNFALHDVDDEEKNNLLSEHSEKLALAYGLLTTSPGCPIRI 282
Query: 119 INNL 122
NL
Sbjct: 283 TKNL 286
>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 687
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 76/128 (59%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPY 54
++ YV+LSN YA A RW ++R +R G++K P SW ++ K HPY
Sbjct: 517 DVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSEVHVFTSEDKKHPY 576
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+I + L++L ++++ GYVP ALHDVEDEQK+ L YHS + A+ FG I TP G
Sbjct: 577 MEQITKKLQELIDKIKVIGYVPNIAVALHDVEDEQKEEHLMYHSEKLALAFGLIRTPKGE 636
Query: 115 TIRLINNL 122
IR++ N+
Sbjct: 637 AIRIMKNV 644
>gi|222632633|gb|EEE64765.1| hypothetical protein OsJ_19621 [Oryza sativa Japonica Group]
Length = 656
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 76/128 (59%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPY 54
++ YV+LSN YA A RW ++R +R G++K P SW ++ K HPY
Sbjct: 486 DVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSEVHVFTSEDKKHPY 545
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+I + L++L ++++ GYVP ALHDVEDEQK+ L YHS + A+ FG I TP G
Sbjct: 546 MEQITKKLQELIDKIKVIGYVPNIAVALHDVEDEQKEEHLMYHSEKLALAFGLIRTPKGE 605
Query: 115 TIRLINNL 122
IR++ N+
Sbjct: 606 AIRIMKNV 613
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 74/124 (59%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+LSN YA+ RW D AR R +R++G+KK PACSWTE+++ HP L I
Sbjct: 631 YVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTVHPEVLSI 690
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L M++ GY+P TK LHD+E E K+ L HS + A+ FG + P G T+R+
Sbjct: 691 YNYLEKLNLEMKKIGYIPDTKYVLHDMESEHKEYALSTHSEKLAVAFGLMKLPQGATVRV 750
Query: 119 INNL 122
NL
Sbjct: 751 FKNL 754
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YAAA W R+R +R++G+KK P S EI +SHP R I
Sbjct: 615 YVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPI 674
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L L M GY+P TK LHDVEDE+K+++L YHS R AI FG ISTP G +R+
Sbjct: 675 YAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLISTPPGTPLRV 734
Query: 119 INNL 122
I NL
Sbjct: 735 IKNL 738
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 76/125 (60%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV++SN YAA RRWKD +R+ ++ G+KK P CSW E+ KSHP I
Sbjct: 826 YVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEI 885
Query: 59 NEALKDLFERMEQE-GYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
L + E++ +E GYV TK LH+ ++E+K +L+ HS R AI +G ++TP+G ++R
Sbjct: 886 YSKLSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLR 945
Query: 118 LINNL 122
+ NL
Sbjct: 946 ITKNL 950
>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 79/132 (59%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
I N YV ++N YAAA +W++ ++R ++ G+ K P SWTEIK
Sbjct: 517 IEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADT 576
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP +I E L++L ++M++EGYVP T LHDVEDEQK+ L YHS + A+ F +ST
Sbjct: 577 SHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILST 636
Query: 111 PDGRTIRLINNL 122
+G I++ NL
Sbjct: 637 EEGTAIKVFKNL 648
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+L N Y+AA W+ ++ +R +R +G+ K P CSW E+ +HP +
Sbjct: 703 YVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPESTLV 762
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ + L+ERM +GY P T LHD+E+ +K +L YHS + AI FG + TP G TIR+
Sbjct: 763 HAHMDALWERMRNQGYTPDTSSVLHDIEESEKAAILRYHSEKLAIAFGLLRTPPGATIRV 822
Query: 119 INNL 122
NL
Sbjct: 823 AKNL 826
>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 693
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 78/132 (59%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
I N YV ++N YAAA +W++ ++R ++ G+ K P SWTEIK
Sbjct: 519 IEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGITKKPGSSWTEIKRKRHVFIAADT 578
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP +I E L +L ++M++EGYVP T LHDVEDEQK+ L YHS + A+ F +ST
Sbjct: 579 SHPMYNQIIEFLGELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILST 638
Query: 111 PDGRTIRLINNL 122
+G I++ NL
Sbjct: 639 EEGTAIKVFKNL 650
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 77/129 (59%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHP 53
+N Y++LS+ YAA +W++ A LR +R+KG++K P CSW + K S+P
Sbjct: 576 HNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSADDQSNP 635
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+ +I L+ L +M QEGYVP LHDV+D +K +L++HS + AI FG I P G
Sbjct: 636 FSDQIYSELEKLNYKMVQEGYVPDMNSVLHDVDDSEKIKMLNHHSEKLAIAFGLIFIPPG 695
Query: 114 RTIRLINNL 122
IR++ NL
Sbjct: 696 LPIRVVKNL 704
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 77/132 (58%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
+N N Y ++SN YA A RWKD AR+R ++ G+KK P CSW + +
Sbjct: 716 MNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDR 775
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP +I L+ L +R++ GYVP T ALHDV++E+K NLL HS + A+ +G ++T
Sbjct: 776 SHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTT 835
Query: 111 PDGRTIRLINNL 122
G IR+ NL
Sbjct: 836 SPGCPIRITKNL 847
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 76/124 (61%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN Y++A W +R ++R G+KK P CSW E + SHP ++
Sbjct: 730 YVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQL 789
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+ L E+M +EGYVP T LH+V++++K+NLL HS + AI FG ++TP G TIR+
Sbjct: 790 HGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRV 849
Query: 119 INNL 122
NL
Sbjct: 850 AKNL 853
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 76/124 (61%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN Y++A W +R ++R G+KK P CSW E + SHP ++
Sbjct: 530 YVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQL 589
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+ L E+M +EGYVP T LH+V++++K+NLL HS + AI FG ++TP G TIR+
Sbjct: 590 HGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRV 649
Query: 119 INNL 122
NL
Sbjct: 650 AKNL 653
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 77/132 (58%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
+N N Y ++SN YA A RWKD AR+R ++ G+KK P CSW + +
Sbjct: 723 MNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDR 782
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP +I L+ L +R++ GYVP T ALHDV++E+K NLL HS + A+ +G ++T
Sbjct: 783 SHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTT 842
Query: 111 PDGRTIRLINNL 122
G IR+ NL
Sbjct: 843 SPGCPIRITKNL 854
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 79/128 (61%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPY 54
N +YV+LSN YA++ +W+D ++R + +G+KK P SW E+++ HP
Sbjct: 654 NAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPE 713
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
R I L+DL RM++ GYV T LHDVE+E+K+++L YHS + A+ +G + P GR
Sbjct: 714 REDIYAFLEDLDIRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILKIPPGR 773
Query: 115 TIRLINNL 122
IR+I NL
Sbjct: 774 PIRVIKNL 781
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YAAA W R+R +R++G+KK P S EI +SHP R I
Sbjct: 616 YVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPI 675
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L L M GY+P TK LHDVEDE+K+++L YHS R AI FG +STP G +R+
Sbjct: 676 YAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLMSTPPGTPLRV 735
Query: 119 INNL 122
I NL
Sbjct: 736 IKNL 739
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 49/124 (39%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+L N Y+AA W+++ +R +R +G+ K P CSW E+ +HP ++
Sbjct: 695 YVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGCSWIELDGAIHRFMAGESAHPESAQV 754
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ + L+ERM +EGYVP T LHDV++ +K +L YHS + AI FG + P G TIR+
Sbjct: 755 HAHMDALWERMRREGYVPDTSCVLHDVDEAEKAAMLRYHSEKLAIAFGLLRAPPGATIRV 814
Query: 119 INNL 122
NL
Sbjct: 815 AKNL 818
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 80/133 (60%), Gaps = 12/133 (9%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
++ ++ YV+LSN YAA+R+W D R ++ K +KK P SW ++K
Sbjct: 1398 LDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDR 1457
Query: 51 SHPYRLRINEALKDLFERMEQEG-YVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIS 109
SHP I E ++DL +R+ +EG YVP T L DVE+E+K+ L+YHS + AI FG IS
Sbjct: 1458 SHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLIS 1517
Query: 110 TPDGRTIRLINNL 122
TP TIR+I NL
Sbjct: 1518 TPPSATIRVIKNL 1530
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 51/124 (41%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN Y+A+ RW + ++R S+ KGM+K P CSW E+ SHP +I
Sbjct: 510 YVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEFLVGDTSHPLSHKI 569
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L+ LF+ + + GY PTT+ L DVE+E+K+ L HS + A+ F IST IR+
Sbjct: 570 YEKLESLFKDLREAGYNPTTEFVLFDVEEEEKEYFLGCHSEKLAVAFALISTGAKDVIRV 629
Query: 119 INNL 122
+ NL
Sbjct: 630 VKNL 633
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 80/133 (60%), Gaps = 12/133 (9%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
++ ++ YV+LSN YAA+R+W D R ++ K +KK P SW ++K
Sbjct: 1398 LDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDR 1457
Query: 51 SHPYRLRINEALKDLFERMEQEG-YVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIS 109
SHP I E ++DL +R+ +EG YVP T L DVE+E+K+ L+YHS + AI FG IS
Sbjct: 1458 SHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLIS 1517
Query: 110 TPDGRTIRLINNL 122
TP TIR+I NL
Sbjct: 1518 TPPSATIRVIKNL 1530
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 76/125 (60%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV++SN Y+A RRWKD +R+ ++ G+KK P CSW E+ KSHP I
Sbjct: 790 YVLVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEI 849
Query: 59 NEALKDLFERMEQE-GYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
L + E++ +E GYV TK LH+ ++E+K +L+ HS R AI +G ++TP+G ++R
Sbjct: 850 YSKLSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLR 909
Query: 118 LINNL 122
+ NL
Sbjct: 910 ITKNL 914
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 76/132 (57%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
I N Y+ L+N YA A W + A +R + N G+ K P SW EIK
Sbjct: 519 IEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKPGKSWIEIKRQVHVFLVGDT 578
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP I+E L +L +++++EGYVP T LHDVE+EQK+ L YHS + A+VFG IST
Sbjct: 579 SHPKTSDIHEFLGELSKKIKEEGYVPDTNFVLHDVEEEQKEQNLVYHSEKLAVVFGIIST 638
Query: 111 PDGRTIRLINNL 122
P G I++ NL
Sbjct: 639 PPGTPIKVFKNL 650
>gi|218196348|gb|EEC78775.1| hypothetical protein OsI_19008 [Oryza sativa Indica Group]
Length = 580
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 74/124 (59%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA+ RW D R+R ++R+ ++K P S+TEI K HP I
Sbjct: 414 YVLLSNVYASKARWMDVGRVRDTMRSNDVRKVPGFSYTEIDGVMHKFINGDKEHPRWQEI 473
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
AL+D+ R+ + GY P T LHD+ +E+K+ L YHS + AI FG I+TP G T+R+
Sbjct: 474 YRALEDIVSRISELGYEPETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLRV 533
Query: 119 INNL 122
I NL
Sbjct: 534 IKNL 537
>gi|220061995|gb|ACL79585.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
Length = 589
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 74/124 (59%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA+ RW D R+R ++R+ ++K P S+TEI K HP I
Sbjct: 423 YVLLSNVYASKARWMDVGRVRDTMRSNDVRKVPGFSYTEIDGVMHKFINGDKEHPRWQEI 482
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
AL+D+ R+ + GY P T LHD+ +E+K+ L YHS + AI FG I+TP G T+R+
Sbjct: 483 YRALEDIVSRISELGYEPETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLRV 542
Query: 119 INNL 122
I NL
Sbjct: 543 IKNL 546
>gi|77554579|gb|ABA97375.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 794
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 74/124 (59%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA+ RW D R+R ++R+ ++K P S+TEI K HP I
Sbjct: 421 YVLLSNVYASKARWMDVGRVRDTMRSNDVRKVPGFSYTEIDGVMHKFINGDKEHPRWQEI 480
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
AL+D+ R+ + GY P T LHD+ +E+K+ L YHS + AI FG I+TP G T+R+
Sbjct: 481 YRALEDIVSRISELGYEPETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLRV 540
Query: 119 INNL 122
I NL
Sbjct: 541 IKNL 544
>gi|220061997|gb|ACL79586.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
Length = 587
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 74/124 (59%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA+ RW D R+R ++R+ ++K P S+TEI K HP I
Sbjct: 421 YVLLSNVYASKARWMDVGRVRDTMRSNDVRKVPGFSYTEIDGVMHKFINGDKEHPRWQEI 480
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
AL+D+ R+ + GY P T LHD+ +E+K+ L YHS + AI FG I+TP G T+R+
Sbjct: 481 YRALEDIVSRISELGYEPETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLRV 540
Query: 119 INNL 122
I NL
Sbjct: 541 IKNL 544
>gi|222630733|gb|EEE62865.1| hypothetical protein OsJ_17668 [Oryza sativa Japonica Group]
Length = 620
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 74/124 (59%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA+ RW D R+R ++R+ ++K P S+TEI K HP I
Sbjct: 250 YVLLSNVYASKARWMDVGRVRDTMRSNDVRKVPGFSYTEIDGVMHKFINGDKEHPRWQEI 309
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
AL+D+ R+ + GY P T LHD+ +E+K+ L YHS + AI FG I+TP G T+R+
Sbjct: 310 YRALEDIVSRISELGYEPETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLRV 369
Query: 119 INNL 122
I NL
Sbjct: 370 IKNL 373
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 77/132 (58%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTE-----------IK 50
+N N Y ++SN YA A RWKD AR+R ++ G+KK P CSW + +
Sbjct: 571 MNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDR 630
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP +I L+ L +R++ GYVP T ALHDV++E+K NLL HS + A+ +G ++T
Sbjct: 631 SHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTT 690
Query: 111 PDGRTIRLINNL 122
G IR+ NL
Sbjct: 691 FPGCPIRITKNL 702
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 77/132 (58%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
+N N Y ++SN YA A RWKD AR+R ++ G+KK P CSW + +
Sbjct: 678 MNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDR 737
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP +I L+ L +R++ GYVP T ALHDV++E+K NLL HS + A+ +G ++T
Sbjct: 738 SHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTT 797
Query: 111 PDGRTIRLINNL 122
G IR+ NL
Sbjct: 798 FPGCPIRITKNL 809
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 49/124 (39%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+L N Y+AA W + +RV +R +G+ K P CSW E+ SHP +
Sbjct: 712 YVLLCNIYSAAGMWDKSVAVRVRMRRQGVAKEPGCSWIELDGAIHRFMAGESSHPASAEV 771
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ + L+ERM +EGY P T LHDV++++K +L YHS + AI FG + P G IR+
Sbjct: 772 HAHMDALWERMRREGYAPDTSCVLHDVDEDEKAAMLRYHSEKLAIAFGLLRAPPGAAIRV 831
Query: 119 INNL 122
NL
Sbjct: 832 AKNL 835
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 77/129 (59%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHP 53
+N YV+LS+ YAA +W++ ARLR +R+KG++K P CSW + K S+P
Sbjct: 577 HNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNP 636
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+ +I L+ L +M +EGYVP LHDV D +K +L++HS + AI FG + P G
Sbjct: 637 FSDQIYSELEKLNYKMIKEGYVPDMNSVLHDVGDSEKIKMLNHHSEKLAIAFGLLFIPPG 696
Query: 114 RTIRLINNL 122
IR++ NL
Sbjct: 697 LPIRVVKNL 705
>gi|302820671|ref|XP_002992002.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
gi|300140244|gb|EFJ06970.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
Length = 620
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 52/124 (41%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+L+N YA+ RW D +R+R + +KK P CSW E+ HP I
Sbjct: 454 FVVLANLYASVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVHEFISGESKHPKIREI 513
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L+ L RM + GYVP T +HDVE+ K+ +L HS R AIVFG +ST G TIR+
Sbjct: 514 CEELEKLTLRMREAGYVPDTTNVVHDVEEGDKEEILSRHSERLAIVFGLMSTRPGETIRV 573
Query: 119 INNL 122
+ NL
Sbjct: 574 VKNL 577
>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
Length = 640
Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 74/124 (59%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA + +W++ AR+R + N+G+KK ACSW E+K SHP I
Sbjct: 474 YVLLSNIYAQSGKWEEAARVRKLMTNRGLKKIIACSWIELKGKSHGFLVGDASHPRSDEI 533
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L+ L + Q GYVP T H+VED++K+N++ HS R AI FG ISTP G + +
Sbjct: 534 YEELERLEGLISQTGYVPDTTSVFHNVEDDEKRNMVRGHSERLAIAFGLISTPPGTKLLV 593
Query: 119 INNL 122
NL
Sbjct: 594 TKNL 597
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV LSN YA+ RW D R + +G+ KTP CS E+ SHP +I
Sbjct: 339 YVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQI 398
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
N L ++ + ++ +G+VP T LHD+E+E+K+ + YHS R A+ FG +STP G+TIR+
Sbjct: 399 NAFLDEIAKELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRV 458
Query: 119 INNL 122
+ NL
Sbjct: 459 VKNL 462
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV LSN YA+ RW D R + +G+ KTP CS E+ SHP +I
Sbjct: 411 YVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQI 470
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
N L ++ + ++ +G+VP T LHD+E+E+K+ + YHS R A+ FG +STP G+TIR+
Sbjct: 471 NAFLDEIAKELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRV 530
Query: 119 INNL 122
+ NL
Sbjct: 531 VKNL 534
>gi|190612857|gb|ACE80806.1| pentatricopeptide repeat protein [Picea abies]
Length = 152
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 71/116 (61%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRINEALKDLF 66
AAA RW DT +R +++ G+K TP CSW E+ +SHP I L+ L
Sbjct: 1 AAADRWDDTEDVRRKMKDAGVKNTPGCSWIEVNKHVHVFLVGDRSHPQTQDIYAELERLS 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
+M+ GYVP T+ LHDVE+EQK+ +L +HS + AI FG I+TP G TIR+I NL
Sbjct: 61 RQMKTAGYVPGTRFVLHDVEEEQKEQILCHHSEKLAIAFGLINTPPGTTIRIIKNL 116
>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 52/124 (41%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+L+N YA+ RW D +R+R + +KK P CSW E+ HP I
Sbjct: 775 FVVLANLYASVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVHEFISGESKHPKIREI 834
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L+ L RM + GYVP T +HDVE+ K+ +L HS R AIVFG +ST G TIR+
Sbjct: 835 CEDLEKLTLRMREAGYVPDTTNVVHDVEEGDKEEILSRHSERLAIVFGLMSTRPGETIRV 894
Query: 119 INNL 122
+ NL
Sbjct: 895 VKNL 898
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 75/124 (60%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y++LSN YA +RW+D A +R ++ N+G++KTP CSW E+ SHP I
Sbjct: 457 YILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEI 516
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L DL ER+ GYVP T L D+E EQK++ L YHS + AI+FG ++ +T+R+
Sbjct: 517 VQRLNDLIERVMGVGYVPDTNFVLQDLEGEQKEDSLRYHSEKLAIMFGLMNLSREKTVRI 576
Query: 119 INNL 122
NL
Sbjct: 577 RKNL 580
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 76/128 (59%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPY 54
N YV+LSN YA A RW+D A++R + + MKK P CS E+ S HP
Sbjct: 566 NPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQ 625
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
I + L ++ R+E+ G+VP T E L+D+++E K+ +L +HS + AI FG IST G
Sbjct: 626 SNEIYKMLDEIDMRLEKAGFVPDTSEVLYDMDEEWKEGVLSHHSEKLAIAFGLISTKPGT 685
Query: 115 TIRLINNL 122
TIR++ NL
Sbjct: 686 TIRIMKNL 693
>gi|242048970|ref|XP_002462229.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
gi|241925606|gb|EER98750.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
Length = 686
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 78/128 (60%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPY 54
N +YV+LSN YA++ +W+D ++R+ + +G+KK P SW E+++ HP
Sbjct: 534 NAGMYVLLSNIYASSGKWRDVDKMRLMMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPE 593
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
R I L+DL RM++ GYV T LHDVE+E+K+++L YHS + A+ +G + P GR
Sbjct: 594 REDIYGFLEDLDIRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILKIPPGR 653
Query: 115 TIRLINNL 122
IR NL
Sbjct: 654 PIRQCCNL 661
>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Glycine max]
Length = 674
Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 81/124 (65%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+L+N Y++A RW++ + +R ++++K +KK P SW E+K HP + I
Sbjct: 508 YVLLANIYSSANRWQNVSEVRRAMKDKMVKKEPGISWVEVKNQVHQFHMGDECHPKHVEI 567
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
N+ L++L ++++GYVP T LHD+++E+K+ +L +HS + AI F ++TP+G IR+
Sbjct: 568 NQYLEELTSEIKRQGYVPDTSSVLHDMDNEEKEQILRHHSEKLAIAFALMNTPEGVPIRV 627
Query: 119 INNL 122
+ NL
Sbjct: 628 MKNL 631
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 73/128 (57%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPY 54
N YV+LSN YA A RW D A++R + +KGMKK P C+ EI K HP
Sbjct: 566 NSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQ 625
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
I L ++ +E+ G+VP T E L+D+++E K+ L HS + AI FG IST G
Sbjct: 626 SENIFRMLDEVDRLLEETGFVPDTSEVLYDMDEEWKEGALTQHSEKLAIAFGLISTKPGS 685
Query: 115 TIRLINNL 122
TIR++ NL
Sbjct: 686 TIRIVKNL 693
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y++LSN YA +++W+D A +R +R +G+KK P CSW E+ SHP I
Sbjct: 420 YILLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEI 479
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L L +R+ + GYVP T L D+E EQ ++ L YHS + AIVFG +S P+ +TI +
Sbjct: 480 KRELSQLIQRLMRLGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQKTIHI 539
Query: 119 INNL 122
NL
Sbjct: 540 RKNL 543
>gi|357519251|ref|XP_003629914.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523936|gb|AET04390.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 75/124 (60%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA++RRW + AR+R+ +++ G+ K P SW +K SHP I
Sbjct: 561 YVLLSNLYASSRRWLEVARIRMKMKHNGIVKQPGSSWITLKGMRHEFLSADRSHPLTEEI 620
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L L ++ + GY+P + ALHDVE EQ + +L YHS R AI FG +ST +G TI +
Sbjct: 621 YEKLVWLGVKLRELGYIPDQQFALHDVEIEQNEEMLSYHSERLAIAFGLLSTVEGSTITI 680
Query: 119 INNL 122
+ NL
Sbjct: 681 MKNL 684
>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Brachypodium distachyon]
Length = 682
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 51/129 (39%), Positives = 76/129 (58%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHP 53
N++ YV+LSN YA A RW ++R +R +G++K P SW ++ K+H
Sbjct: 511 NDVGTYVLLSNMYAKANRWDGVVKVRKLMRERGVRKEPGVSWIQVGSEVHVFTSEDKNHK 570
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+ +I LK+L +++ GYVP LHDVE EQK+ L YHS + A+ FG I +P+G
Sbjct: 571 WINQITIKLKELIGQIKVIGYVPNCAVVLHDVEAEQKEEHLMYHSEKMALAFGLIHSPEG 630
Query: 114 RTIRLINNL 122
TIR++ NL
Sbjct: 631 ETIRIMKNL 639
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 74/124 (59%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
Y+ILSN YAA +W + AR+R+ +R +G+KK P CSW E+++ HP +
Sbjct: 629 YIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEVQAV 688
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L M++ GYVP TK LHD+E E K++ L HS + A+V+G + P G TIR+
Sbjct: 689 YTYLQQLVNEMKKLGYVPDTKFVLHDMESEHKEHSLSTHSEKLAVVYGIMKLPLGATIRV 748
Query: 119 INNL 122
NL
Sbjct: 749 FKNL 752
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 50/124 (40%), Positives = 74/124 (59%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
Y++LSN Y+AA RW D AR+R +R++G+KK P CSW E+ S HP +
Sbjct: 642 YILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEV 701
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+ + RM + GYVP TK LHD+E +K+ +L HS + A+ FG + P G T+ +
Sbjct: 702 YQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATVTV 761
Query: 119 INNL 122
+ NL
Sbjct: 762 LKNL 765
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 74/124 (59%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+LSN YA RW D A++R +R+KG+KK P CSW E+++ HP +
Sbjct: 633 YVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAV 692
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L++L +M + GY+P TK LHD+E EQK+ +L HS + A+ FG + P G T+R+
Sbjct: 693 YNYLEELGLKMRKLGYIPDTKFVLHDMESEQKEYVLSTHSEKLAVGFGLLKLPLGATVRV 752
Query: 119 INNL 122
NL
Sbjct: 753 FKNL 756
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 75/124 (60%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN Y++A W LR ++ G+KK P CSW E SHP ++
Sbjct: 648 YVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLSHPQSEKL 707
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
++ L+ L ER+++EGYVP T LHD+++E+K+ +L HS + AI FG ++TP G TIR+
Sbjct: 708 HDFLETLSERLKKEGYVPDTACVLHDIDEEEKETILCGHSEKLAIAFGILNTPPGTTIRV 767
Query: 119 INNL 122
NL
Sbjct: 768 AKNL 771
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 75/124 (60%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
Y++LSN Y+AA RW D AR+R +R++G+KK P CSW E + HP ++
Sbjct: 636 YILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDTKHPEAHKV 695
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+ + RM + GYVP TK LHD+E QK+++L HS R A+ FG + P G T+ +
Sbjct: 696 YKFLEMVGARMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLKLPPGATVTV 755
Query: 119 INNL 122
+ NL
Sbjct: 756 LKNL 759
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 74/124 (59%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
Y++LSN Y+AA RW D AR+R +R++G+KK P CSW E+ S HP +
Sbjct: 640 YILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEV 699
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+ + RM + GYVP TK LHD+E +K+ +L HS + A+ FG + P G T+ +
Sbjct: 700 YQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATVTV 759
Query: 119 INNL 122
+ NL
Sbjct: 760 LKNL 763
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 75/124 (60%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN Y+A+RRW + ++R +V KGM+K P SW E+ SHP +I
Sbjct: 512 YVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKI 571
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L+ LF+ +++ GY PTT+ L DVE+E+K++ L HS + A+ F IST IR+
Sbjct: 572 YEKLESLFKDLKEAGYNPTTEFVLFDVEEEEKEHFLGCHSEKLAVAFALISTGAKYVIRV 631
Query: 119 INNL 122
+ NL
Sbjct: 632 VKNL 635
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 75/124 (60%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YAAA RW D R ++ K +KK P SW ++K SHP I
Sbjct: 699 YVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADII 758
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ ++++ + + ++GYVP T+ L DVEDE+K+ L+YHS + AI +G ISTP TIR+
Sbjct: 759 YDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRV 818
Query: 119 INNL 122
I NL
Sbjct: 819 IKNL 822
>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
Length = 805
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 74/129 (57%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HP 53
N+ YV L N Y+AA RW+D A +R + + G++K P S EI+S HP
Sbjct: 634 NHTAAYVALCNIYSAAGRWEDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHP 693
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
I L+ + +E+ GY T E LHDVE+EQK+ LL +HS + AI FG +STP G
Sbjct: 694 QSEAIYAELERVMGAIERAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQG 753
Query: 114 RTIRLINNL 122
T+R+I NL
Sbjct: 754 STLRVIKNL 762
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 75/124 (60%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YAAA RW D R ++ K +KK P SW ++K SHP I
Sbjct: 337 YVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADII 396
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ ++++ + + ++GYVP T+ L DVEDE+K+ L+YHS + AI +G ISTP TIR+
Sbjct: 397 YDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRV 456
Query: 119 INNL 122
I NL
Sbjct: 457 IKNL 460
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 72/129 (55%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHP 53
++ Y++LSN YA A+RW ++R +R + +KK P SW EI K+HP
Sbjct: 532 GDVGTYILLSNMYAKAKRWDGVVKIRKLMRERNVKKEPGASWIEIRNSIHVFVSEGKTHP 591
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+I E +++L + GYVP HDVEDEQK+ + YHS + AI +G + TP G
Sbjct: 592 ESNQIYEKVQELLTMIRPMGYVPDIAAVFHDVEDEQKREYVSYHSEKLAIAYGLMKTPSG 651
Query: 114 RTIRLINNL 122
IR+I NL
Sbjct: 652 APIRVIKNL 660
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 75/125 (60%), Gaps = 11/125 (8%)
Query: 9 VYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLR 57
YV+LSN YAAA RW D R ++ K +KK P SW ++K SHP
Sbjct: 1413 AYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADI 1472
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I + ++++ + + ++GYVP T+ L DVEDE+K+ L+YHS + AI +G ISTP TIR
Sbjct: 1473 IYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIR 1532
Query: 118 LINNL 122
+I NL
Sbjct: 1533 VIKNL 1537
>gi|326532850|dbj|BAJ89270.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA+ RW D R+R ++R+ ++K P S+TEI K HP I
Sbjct: 414 YVLLSNVYASKARWADVGRVRDTMRSNDVRKVPGFSYTEISGVMHKFINGDKEHPRLQEI 473
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
AL ++ R+ + GY P T LHD+ +E+K+ L YHS + AI FG I+TP G T+R+
Sbjct: 474 YRALGEIMSRIGELGYEPETSNVLHDIGEEEKQYALSYHSEKLAIAFGLIATPPGETLRV 533
Query: 119 INNL 122
I N+
Sbjct: 534 IKNI 537
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 75/124 (60%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN Y+ RW+D A+LR+ ++ KG++K PACSW E KSHP +I
Sbjct: 526 YVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQI 585
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L +L M+ GY PTT+ + DVEDE+K++ L +HS + AI F + T G TIR+
Sbjct: 586 YKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRV 645
Query: 119 INNL 122
NL
Sbjct: 646 TKNL 649
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV LSN Y+ + RW + A +R + KGMKK P SW E+ KSHP +I
Sbjct: 519 YVQLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGYSWIELEGTVHEFLADDKSHPLSDKI 578
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+DL M G+VPTT+ DVEDE+K+ +L +HS + A+ FG IST G+ IR+
Sbjct: 579 YAKLEDLGNEMRLMGFVPTTEFVFFDVEDEEKERVLGHHSEKLAVAFGLISTDHGQVIRV 638
Query: 119 INNL 122
+ NL
Sbjct: 639 VKNL 642
>gi|222626043|gb|EEE60175.1| hypothetical protein OsJ_13106 [Oryza sativa Japonica Group]
Length = 628
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/124 (38%), Positives = 74/124 (59%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN A +RRW D + +R ++R+ ++K P SW E+K SHP + I
Sbjct: 480 YVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEI 539
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+E L+++ ++ Q GY P LHD+EDE+K+ L +HS + AI F +S P+G IR+
Sbjct: 540 DECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRV 599
Query: 119 INNL 122
+ NL
Sbjct: 600 MKNL 603
>gi|218193985|gb|EEC76412.1| hypothetical protein OsI_14066 [Oryza sativa Indica Group]
Length = 628
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/124 (38%), Positives = 74/124 (59%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN A +RRW D + +R ++R+ ++K P SW E+K SHP + I
Sbjct: 480 YVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEI 539
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+E L+++ ++ Q GY P LHD+EDE+K+ L +HS + AI F +S P+G IR+
Sbjct: 540 DECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRV 599
Query: 119 INNL 122
+ NL
Sbjct: 600 MKNL 603
>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 646
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/124 (38%), Positives = 74/124 (59%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN A +RRW D + +R ++R+ ++K P SW E+K SHP + I
Sbjct: 480 YVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEI 539
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+E L+++ ++ Q GY P LHD+EDE+K+ L +HS + AI F +S P+G IR+
Sbjct: 540 DECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRV 599
Query: 119 INNL 122
+ NL
Sbjct: 600 MKNL 603
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 75/124 (60%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN Y+ RW+D A+LR+ ++ KG++K PACSW E KSHP +I
Sbjct: 479 YVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQI 538
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L +L M+ GY PTT+ + DVEDE+K++ L +HS + AI F + T G TIR+
Sbjct: 539 YKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRV 598
Query: 119 INNL 122
NL
Sbjct: 599 TKNL 602
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 74/132 (56%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
+N N VYV+LSN YAAA RW D A++R + +G++K P SW E+ +
Sbjct: 987 LNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADR 1046
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP I E LK L ME+ GY P T+ LH+++ E ++ L HS R AI +G + T
Sbjct: 1047 SHPETAEIYEELKRLSLEMERAGYSPDTQYVLHNLDKEHQETSLCTHSERLAIAYGLLKT 1106
Query: 111 PDGRTIRLINNL 122
P G IR+ NL
Sbjct: 1107 PPGTPIRIFKNL 1118
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 75/129 (58%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHP 53
++ YV+LSN YAAA RWK+ +R + +K +KK CSW +IK SHP
Sbjct: 703 DDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQIKNKVHSFIACDKSHP 762
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+I LK + R++QEGY P T LHD+ +EQK+ +L HS R A+ FG I+TP
Sbjct: 763 LSEQIYAKLKAMTTRLKQEGYCPNTSVVLHDIAEEQKETMLVMHSERLALAFGLIATPPR 822
Query: 114 RTIRLINNL 122
++++ NL
Sbjct: 823 TPLQIVKNL 831
>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
Length = 708
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/124 (38%), Positives = 74/124 (59%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN A +RRW D + +R ++R+ ++K P SW E+K SHP + I
Sbjct: 542 YVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEI 601
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+E L+++ ++ Q GY P LHD+EDE+K+ L +HS + AI F +S P+G IR+
Sbjct: 602 DECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRV 661
Query: 119 INNL 122
+ NL
Sbjct: 662 MKNL 665
>gi|28876027|gb|AAO60036.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 704
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/124 (38%), Positives = 74/124 (59%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN A +RRW D + +R ++R+ ++K P SW E+K SHP + I
Sbjct: 546 YVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEI 605
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+E L+++ ++ Q GY P LHD+EDE+K+ L +HS + AI F +S P+G IR+
Sbjct: 606 DECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRV 665
Query: 119 INNL 122
+ NL
Sbjct: 666 MKNL 669
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 74/128 (57%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPY 54
N +V+LSN YA A RW D AR+R + +KGMKK P C+ EI K HP
Sbjct: 568 NAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPE 627
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
I + L ++ + +E+ G+VP T E L+D+++E K+ L HS + AI FG I T G
Sbjct: 628 CNNIYKMLNEVDKLLEENGFVPNTSEVLYDMDEEWKEGALSQHSEKLAISFGLIKTKPGT 687
Query: 115 TIRLINNL 122
TIR++ NL
Sbjct: 688 TIRIVKNL 695
>gi|357124741|ref|XP_003564056.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Brachypodium distachyon]
Length = 594
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 74/124 (59%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA+ RW D R+R ++R+ ++K P S+TEI K HP I
Sbjct: 428 YVLLSNVYASKARWADVRRVRDTMRSNDVRKVPGFSYTEISGVMHKFINGDKEHPRWQEI 487
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
AL+++ R+ + GY P T LHD+ +E+K+ L YHS + AI FG I+TP G T+R+
Sbjct: 488 YRALEEIVSRIGELGYEPETSNVLHDIGEEEKQYALSYHSEKLAIAFGLIATPPGETLRV 547
Query: 119 INNL 122
I NL
Sbjct: 548 IKNL 551
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 75/125 (60%), Gaps = 11/125 (8%)
Query: 9 VYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLR 57
+YV+LSN YAAA +W D A++R ++++G+ K P SW E+K SHP
Sbjct: 347 IYVLLSNIYAAAGQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKE 406
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I+E L+ L +M+ GYVP L DVED++K+ L +HS + AI FG I+T G TIR
Sbjct: 407 IHEFLESLSRKMKAAGYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIR 466
Query: 118 LINNL 122
+ NL
Sbjct: 467 VAKNL 471
>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 852
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 74/128 (57%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPY 54
N YV+LSN Y AAR+W D A++R +++KG+ K P CSW E+ S HP
Sbjct: 682 NAMPYVMLSNMYLAARKWDDAAKIRRLMKSKGITKEPGCSWIEMNSRLHTFISEDRGHPR 741
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
I + ++ R+++ GYVP +LHD++ E K+ L YHS + A+ FG +++P G
Sbjct: 742 EAEIYSKIDEIIRRIKEVGYVPDMNFSLHDMDREGKEAGLAYHSEKLAVAFGLLASPPGA 801
Query: 115 TIRLINNL 122
IR+ NL
Sbjct: 802 PIRIFKNL 809
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 75/124 (60%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN Y+ RW+D A+LR+ ++ KG++K PACSW E KSHP +I
Sbjct: 479 YVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQI 538
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L +L M+ GY PTT+ + DVEDE+K++ L +HS + AI F + T G TIR+
Sbjct: 539 YKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRV 598
Query: 119 INNL 122
NL
Sbjct: 599 TKNL 602
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 74/132 (56%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
++ N YV+LSN YA A WKD R+RV V+ +G++K P S E+K
Sbjct: 495 LDATNCGYYVLLSNIYAEAGMWKDVERMRVLVKTRGIEKPPGYSSVELKGRTHLFYVGDK 554
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP I L L E+M++ GYVP T LHD+++E+K + LH HS + AI F +++
Sbjct: 555 SHPQHKEIYSYLGKLLEKMQEAGYVPNTGSVLHDLDEEEKASALHIHSEKLAIAFALMNS 614
Query: 111 PDGRTIRLINNL 122
G I +I NL
Sbjct: 615 VPGSVIHVIKNL 626
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA + +W+ AR+R + N+G+KK CSW E+K SHP I
Sbjct: 471 YVLLSNIYAQSGKWEKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEI 530
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L+ L M GY+P T HDV D++K+N++ HS R AI FG ISTP G + +
Sbjct: 531 YEELERLEGLMSDAGYMPDTMPVFHDVGDDEKRNMMRSHSERLAIAFGLISTPSGTKLLV 590
Query: 119 INNL 122
NL
Sbjct: 591 TKNL 594
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 79/128 (61%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS--HPYRL--RINEA 61
N YV+LSN YA A RW D AR+R + +KGMKK P CS E+ S H + + +++E
Sbjct: 568 NPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQ 627
Query: 62 LKDLF-------ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+D++ + +E+ G+VP T E L+D+++E K+ L +HS + AI FG IST
Sbjct: 628 SQDIYKMLDEIDQLLEKAGHVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPET 687
Query: 115 TIRLINNL 122
TIR++ NL
Sbjct: 688 TIRIVKNL 695
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 75/130 (57%), Gaps = 12/130 (9%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK------------SH 52
N + Y++LSN YA+A RW++ ++LR +R KG KK P CSW E K +H
Sbjct: 478 NGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTH 537
Query: 53 PYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPD 112
P I +ALK L ER+ GY P A +D+ D++K+ +L HS + A+ +G + T
Sbjct: 538 PRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEA 597
Query: 113 GRTIRLINNL 122
G TI+++ N+
Sbjct: 598 GDTIKIMKNI 607
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 75/130 (57%), Gaps = 12/130 (9%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK------------SH 52
N + Y++LSN YA+A RW++ ++LR +R KG KK P CSW E K +H
Sbjct: 478 NGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTH 537
Query: 53 PYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPD 112
P I +ALK L ER+ GY P A +D+ D++K+ +L HS + A+ +G + T
Sbjct: 538 PRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEA 597
Query: 113 GRTIRLINNL 122
G TI+++ N+
Sbjct: 598 GDTIKIMKNI 607
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YVILSN YA A +W ARLR + NKG+KK+ ACSW E+ SHP I
Sbjct: 408 YVILSNMYAQAGKWDGVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAI 467
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
LK + M++ GY P HDVED++K +++ HS R AI FG IST G + +
Sbjct: 468 YAELKRTGKLMKEAGYAPQVGSVFHDVEDDEKVDMVSCHSERLAIAFGLISTSAGTKLLI 527
Query: 119 INNL 122
I NL
Sbjct: 528 IKNL 531
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA A RW+D A++R + + +KKTP +W E+ +HP I
Sbjct: 467 YVLLSNIYANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRSKEI 526
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E LK L ++E GYVP T LHDV++E K +L+ HS + AI FG I+TP+ IR+
Sbjct: 527 YEMLKSLSNKLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRI 586
Query: 119 INNL 122
I NL
Sbjct: 587 IKNL 590
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y++LSN YA A RW+D A++R + + +KK P +W E+ +HP I
Sbjct: 1143 YILLSNIYANAGRWEDVAKIRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEI 1202
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E LK L ++E GYVP T LHDV++E K +L+ HS + AI FG I+TP+ IR+
Sbjct: 1203 YEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRI 1262
Query: 119 INNL 122
I NL
Sbjct: 1263 IKNL 1266
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 75/124 (60%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN Y+ RW+D A+LR+ ++ KG++K PACSW E KSHP +I
Sbjct: 958 YVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQI 1017
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L +L M+ GY PTT+ + DVEDE+K++ L +HS + AI F + T G TIR+
Sbjct: 1018 YKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRV 1077
Query: 119 INNL 122
NL
Sbjct: 1078 TKNL 1081
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 75/124 (60%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN Y+ RW+D A+LR+ ++ KG++K PACSW E KSHP +I
Sbjct: 934 YVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQI 993
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L +L M+ GY PTT+ + DVEDE+K++ L +HS + AI F + T G TIR+
Sbjct: 994 YKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRV 1053
Query: 119 INNL 122
NL
Sbjct: 1054 TKNL 1057
>gi|190612843|gb|ACE80799.1| pentatricopeptide repeat protein [Isoetes engelmannii]
Length = 143
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 73/129 (56%), Gaps = 11/129 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++ N YV+LSN YA A RW D AR+R + +G+KK P CS EI
Sbjct: 15 LDPGNPAAYVVLSNIYARAGRWVDVARIRKLMVERGIKKEPGCSSIEIGNQVHTFLIGDN 74
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP + I LK L ++E GYVP T LHD+++E K+ LL YHS + AI FG +ST
Sbjct: 75 SHPMKEAIYARLKLLNTQLEACGYVPDTSSVLHDLDEETKETLLGYHSEKLAISFGLLST 134
Query: 111 PDGRTIRLI 119
G +R++
Sbjct: 135 SSGTPLRIV 143
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 71/132 (53%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
+N N VY++LSN YAAA RW D A++R + +G++K P SW E+ +
Sbjct: 932 LNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADR 991
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP I LK L ME+ GY P T+ LHD+ ++ L HS R AI +G I T
Sbjct: 992 SHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKT 1051
Query: 111 PDGRTIRLINNL 122
P G IR+ NL
Sbjct: 1052 PPGTPIRIFKNL 1063
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 71/132 (53%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
+N N VY++LSN YAAA RW D A++R + +G++K P SW E+ +
Sbjct: 731 LNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADR 790
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP I LK L ME+ GY P T+ LHD+ ++ L HS R AI +G I T
Sbjct: 791 SHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKT 850
Query: 111 PDGRTIRLINNL 122
P G IR+ NL
Sbjct: 851 PPGTPIRIFKNL 862
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 74/132 (56%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS---------- 51
I N YV+LSN YA A RW+D AR+R + KGMKK P CS E+ S
Sbjct: 501 IEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDK 560
Query: 52 -HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
HP R I L+++ ++E+ G+ P T E L ++E+E K+ L +HS + AI FG IST
Sbjct: 561 LHPRRREIYHMLEEMDVQLEEAGFAPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIST 620
Query: 111 PDGRTIRLINNL 122
G + ++ NL
Sbjct: 621 KPGTKLTIVKNL 632
>gi|296084769|emb|CBI25911.3| unnamed protein product [Vitis vinifera]
Length = 288
Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 71/132 (53%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
I N Y L+N YA A W A +R + +G+ K P SW EIK
Sbjct: 114 IEPENPATYTTLANIYATAGLWGGVAEVRKVMDARGVVKKPGLSWIEIKREVHVFLVGDT 173
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SH I+E L L +RM++EGYVP T LHDVE+EQK+ L YHS + A+ FG IST
Sbjct: 174 SHAKSKEIHEFLGKLSKRMKEEGYVPDTNFVLHDVEEEQKEQNLSYHSEKLAVAFGIIST 233
Query: 111 PDGRTIRLINNL 122
P G I++ NL
Sbjct: 234 PAGTLIKVFKNL 245
>gi|294464543|gb|ADE77782.1| unknown [Picea sitchensis]
Length = 210
Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 75/125 (60%), Gaps = 11/125 (8%)
Query: 9 VYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLR 57
+YV+LSN YAAA +W D A++R ++++G+ K P SW E+K SHP
Sbjct: 43 IYVLLSNIYAAAGQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKE 102
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I+E L+ L +M+ GYVP L DVED++K+ L +HS + AI FG I+T G TIR
Sbjct: 103 IHEFLESLSRKMKAAGYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIR 162
Query: 118 LINNL 122
+ NL
Sbjct: 163 VAKNL 167
>gi|359497573|ref|XP_003635569.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 287
Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 71/132 (53%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
I N Y L+N YA A W A +R + +G+ K P SW EIK
Sbjct: 113 IEPENPATYTTLANIYATAGLWGGVAEVRKVMDARGVVKKPGLSWIEIKREVHVFLVGDT 172
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SH I+E L L +RM++EGYVP T LHDVE+EQK+ L YHS + A+ FG IST
Sbjct: 173 SHAKSKEIHEFLGKLSKRMKEEGYVPDTNFVLHDVEEEQKEQNLSYHSEKLAVAFGIIST 232
Query: 111 PDGRTIRLINNL 122
P G I++ NL
Sbjct: 233 PAGTLIKVFKNL 244
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 73/128 (57%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPY 54
+M Y +LSN YA AR W +R +R + +KK P SW EI++ HP
Sbjct: 530 DMGTYTLLSNMYAKARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGSNHPE 589
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
++I ++ L E ++Q GYVP + LHDVEDEQK++ L+YHS + AI +G + P
Sbjct: 590 CIQIYNKVQLLLEMIKQLGYVPNIEAVLHDVEDEQKESYLNYHSEKLAIAYGLMKIPSPA 649
Query: 115 TIRLINNL 122
IR+I NL
Sbjct: 650 PIRVIKNL 657
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA +W DT LRVS++ + ++K P SW +K SHP I
Sbjct: 554 YVMLSNIYATNNKWHDTFELRVSMQERKVRKQPGRSWIHLKNTVHTFVAGDASHPQSAEI 613
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L ER+++ GY T +HDVEDEQ++ L +HS + AI FG ISTP G +R+
Sbjct: 614 YAYLEKLVERLKEIGYTSRTDLVVHDVEDEQRETALKFHSEKLAIAFGIISTPSGTPLRI 673
Query: 119 INNL 122
NL
Sbjct: 674 FKNL 677
>gi|294461983|gb|ADE76547.1| unknown [Picea sitchensis]
Length = 210
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 74/124 (59%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV LSN Y+AA RW + A+LR + ++G+KK P SW ++K SHP I
Sbjct: 44 YVALSNIYSAAGRWDEAAKLRRLMNDRGVKKEPGYSWVQVKNMVHTFSVGDISHPQIEDI 103
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L L +M+ G+VP T ALHDV+DEQK+ L++HS + AI F ISTP G +I++
Sbjct: 104 YAMLDKLAGQMKTAGHVPNTNFALHDVDDEQKERTLYHHSEKLAIAFALISTPHGTSIQI 163
Query: 119 INNL 122
NL
Sbjct: 164 NKNL 167
>gi|190612825|gb|ACE80790.1| pentatricopeptide repeat protein [Equisetum telmateia]
Length = 152
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 71/116 (61%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRINEALKDLF 66
AAA RW D AR+R ++R+KG+KK P S EIKS HP R I L L
Sbjct: 1 AAAGRWDDVARVRKAMRDKGLKKEPGKSCIEIKSKIHEFVSGDRYHPEREAIYTELNRLM 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
+ +E+ GYV TK LHDVE+ +KK+LL++HS R AI +G + TP G +R+I NL
Sbjct: 61 KEIEEAGYVADTKTVLHDVEESRKKHLLYHHSERLAIAYGLLKTPPGTPLRIIKNL 116
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 79/136 (58%), Gaps = 17/136 (12%)
Query: 4 LNNMRV------YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK------- 50
L NM+V YV +SN YAAA W + +++ ++R +G+KK PA SW EIK
Sbjct: 696 LFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKTHVFT 755
Query: 51 ----SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFG 106
+HP I + L +L E+M ++GY P + ALH+V++E K L YHS R AI F
Sbjct: 756 ANDKTHPQMREIMKKLDELEEKMVKKGYKPDSSCALHNVDEEVKVESLKYHSERIAIAFA 815
Query: 107 AISTPDGRTIRLINNL 122
ISTP+G I ++ NL
Sbjct: 816 LISTPEGSPILVMKNL 831
>gi|357121594|ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 544
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
+V+LSN YAA RW +R ++R+KG++K P CS E+ KSHP I
Sbjct: 378 HVLLSNLYAAVGRWNGVEDVRRTMRSKGIEKIPGCSSVEMDGSIHEFISGDKSHPSYDDI 437
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L ++ RM+Q GYV T E +D+EDE+K+ L YHS + AI FG I P TIR+
Sbjct: 438 HAKLIEIGGRMQQHGYVTETAEVFYDIEDEEKEQALGYHSEKLAIAFGLIGGPPEATIRI 497
Query: 119 INNL 122
+ NL
Sbjct: 498 VKNL 501
>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
Length = 805
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 53/124 (42%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV L N Y+AA RW D A +R + + G++K P S EI+S HP I
Sbjct: 639 YVALCNIYSAAGRWDDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAI 698
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ + +E+ GY T E LHDVE+EQK+ LL +HS + AI FG +STP G T+R+
Sbjct: 699 YAELERVMGAIERAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRV 758
Query: 119 INNL 122
I NL
Sbjct: 759 IKNL 762
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 75/133 (56%), Gaps = 11/133 (8%)
Query: 1 MINLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK---------- 50
M L + YV +SN YAAA W +++ ++R +G++K PA SW EIK
Sbjct: 640 MKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRKVPAYSWVEIKQKTHVFSAND 699
Query: 51 -SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIS 109
SHP I L +L ++ME++GY P + ALH+V++E K L YHS R AI F IS
Sbjct: 700 TSHPQTKEITRKLDELEKQMEEQGYKPDSTCALHNVDEEVKVESLKYHSERIAIAFALIS 759
Query: 110 TPDGRTIRLINNL 122
TP G I ++ NL
Sbjct: 760 TPKGSPILVMKNL 772
>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
Length = 515
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 75/124 (60%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN Y+ + RW+D A+LR+ ++ KG++K PA SW E+ SHP +I
Sbjct: 349 YVMLSNIYSNSGRWEDAAKLRLEMKAKGIEKVPASSWVELDGKVHKFYVGDDSHPLSDKI 408
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L +L M+ GY PTT+ + DVE+E+K+N L +HS + AI F I+T G TIR+
Sbjct: 409 YAKLDELGMEMKAMGYEPTTEVVMFDVENEEKENTLVHHSEKIAIAFSLITTEPGETIRV 468
Query: 119 INNL 122
NL
Sbjct: 469 TKNL 472
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV LSN Y+ RW + A +R + KGMKK P SW E+ KSHP +I
Sbjct: 519 YVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKI 578
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+DL M G+VPTT+ DVE+E+K+ +L YHS + A+ G IST G+ IR+
Sbjct: 579 YAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRV 638
Query: 119 INNL 122
+ NL
Sbjct: 639 VKNL 642
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 50/124 (40%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN Y+AA +WK+ +R + K +KK CSW +IK SHP +I
Sbjct: 712 YVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQI 771
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ + +++QEGY P T ALH+V +EQK+ +L HS R A+ FG I+TP G + +
Sbjct: 772 YAKLRAMTTKLKQEGYCPDTSFALHEVAEEQKEAMLAMHSERLALAFGLIATPPGAPLHI 831
Query: 119 INNL 122
NL
Sbjct: 832 FKNL 835
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS---------- 51
I N YV+LSN YA A RW+D AR+R + KGMKK P CS EI S
Sbjct: 517 IEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDK 576
Query: 52 -HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
HP I L+++ +E+ G+VP T E L ++E+E K+ L +HS + AI FG IST
Sbjct: 577 LHPQSREIYRMLEEMDVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIST 636
Query: 111 PDGRTIRLINNL 122
G + ++ NL
Sbjct: 637 KPGTKLTVVKNL 648
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 75/129 (58%), Gaps = 12/129 (9%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK------------SHP 53
N YV+L+N YA A +W++ R+R + KG++K P CSW EIK SHP
Sbjct: 496 NTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHP 555
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+ +I LK + +M++EGY P TK AL + ++ QK+ L HS + A+ FG ++ P
Sbjct: 556 HSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPR 615
Query: 114 RTIRLINNL 122
+TIR+ NL
Sbjct: 616 KTIRVTKNL 624
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTE-----------IKSHPYRLRI 58
YV++SN Y++A W +R ++ G++K P CSW E SHP +
Sbjct: 969 YVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHGDEVHKFLSGDASHPQSKEL 1028
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+E L+ L +RM +EGYVP LH+V+DE+K+ +L HS R AI FG ++TP G TIR+
Sbjct: 1029 HEYLETLSQRMRKEGYVPDISCVLHNVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRV 1088
Query: 119 INNL 122
NL
Sbjct: 1089 AKNL 1092
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y++LSN +A+A +WKD ++R S++ + + K CSW E++ SHP +I
Sbjct: 331 YILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQI 390
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L L ++++ GY+P T LHD+E+EQK+ L HS + A+ FG IST + IR+
Sbjct: 391 YQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRI 450
Query: 119 INNL 122
NL
Sbjct: 451 FKNL 454
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YVILSN YA A +W+ A+LR + ++ +KK+ ACSW E+K SHP I
Sbjct: 482 YVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEI 541
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ + M++ GY P+T HDVED++K N++ HS R AI FG ISTP G + +
Sbjct: 542 YSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLI 601
Query: 119 INNL 122
NL
Sbjct: 602 TKNL 605
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y++LSN +A+A +WKD ++R S++ + + K CSW E++ SHP +I
Sbjct: 661 YILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQI 720
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L L ++++ GY+P T LHD+E+EQK+ L HS + A+ FG IST + IR+
Sbjct: 721 YQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRI 780
Query: 119 INNL 122
NL
Sbjct: 781 FKNL 784
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y++LSN +A+A +WKD ++R S++ + + K CSW E++ SHP +I
Sbjct: 643 YILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQI 702
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L L ++++ GY+P T LHD+E+EQK+ L HS + A+ FG IST + IR+
Sbjct: 703 YQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRI 762
Query: 119 INNL 122
NL
Sbjct: 763 FKNL 766
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y++LSN +A+A +WKD ++R S++ + + K CSW E++ SHP +I
Sbjct: 463 YILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQI 522
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L L ++++ GY+P T LHD+E+EQK+ L HS + A+ FG IST + IR+
Sbjct: 523 YQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRI 582
Query: 119 INNL 122
NL
Sbjct: 583 FKNL 586
>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YVILSN YA A +W+ A+LR + ++ +KK+ ACSW E+K SHP I
Sbjct: 384 YVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEI 443
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ + M++ GY P+T HDVED++K N++ HS R AI FG ISTP G + +
Sbjct: 444 YSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLI 503
Query: 119 INNL 122
NL
Sbjct: 504 TKNL 507
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+LS+ YA + RW D + R + + G+KKTP CSW E+K SHP +
Sbjct: 839 FVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESM 898
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L E+ME+ GYVP L +VE+E K+ L+ HS R AI F ++TP G TI++
Sbjct: 899 HLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQI 958
Query: 119 INNL 122
+ NL
Sbjct: 959 VKNL 962
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+LS+ YA + RW D + R + + G+KKTP CSW E+K SHP +
Sbjct: 839 FVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESM 898
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L E+ME+ GYVP L +VE+E K+ L+ HS R AI F ++TP G TI++
Sbjct: 899 HLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQI 958
Query: 119 INNL 122
+ NL
Sbjct: 959 VKNL 962
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-------------KSHPYRL 56
YV+LSN YA A RW+D AR+R +R++G+KKTP W+ I +HP
Sbjct: 451 YVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPG--WSSIMVEGVVYNFVAGDDTHPQTE 508
Query: 57 RINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTI 116
I + + L +RM+ +GYVP T L D+E++QK+ L+ HS + A+VFG I T G I
Sbjct: 509 EIFQTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKEKFLYRHSEKLAVVFGLIKTTPGTVI 568
Query: 117 RLINNL 122
R++ NL
Sbjct: 569 RIMKNL 574
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y++LS+ YAA +W D A+LR +R G+KK P SW + K S P+ +I
Sbjct: 577 YILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHIFSADDRSSPFSDQI 636
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L+ +M +EGYVP LHDVE +K +L++HS + AI FG + PDG IR+
Sbjct: 637 YAKLESLYLKMIEEGYVPDMSFVLHDVEKSEKIKMLNHHSEKLAIAFGLLFIPDGLQIRV 696
Query: 119 INNL 122
+ NL
Sbjct: 697 VKNL 700
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y++LSN +A+A +WKD ++R S++ + + K CSW E++ SHP +I
Sbjct: 468 YILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQI 527
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L L ++++ GY+P T LHD+E+EQK+ L HS + A+ FG IST + IR+
Sbjct: 528 YQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRI 587
Query: 119 INNL 122
NL
Sbjct: 588 FKNL 591
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 79/133 (59%), Gaps = 11/133 (8%)
Query: 1 MINLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK---------- 50
M +L + Y+ +SN YA A +W + A+++ ++R++G++K PA SW EIK
Sbjct: 641 MEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSAND 700
Query: 51 -SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIS 109
SHP +I + L + ME++GY P T ALHDV++ K L YHS RFAI F ++
Sbjct: 701 KSHPEMKKILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMN 760
Query: 110 TPDGRTIRLINNL 122
TPDG I ++ NL
Sbjct: 761 TPDGSPIVVMKNL 773
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRLRINEA-------- 61
Y+ LSN YAA +W + AR+R +R +G+KK P CSW E+++ + +++A
Sbjct: 616 YISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPEVHAV 675
Query: 62 ---LKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L M + GYVP TK LHD+E EQK+ L HS + A+V+G + P G TIR+
Sbjct: 676 YRYLEQLVHEMRKLGYVPDTKFVLHDMESEQKEYALSTHSEKLAVVYGIMKLPLGATIRV 735
Query: 119 INNL 122
NL
Sbjct: 736 FKNL 739
>gi|297736728|emb|CBI25813.3| unnamed protein product [Vitis vinifera]
Length = 286
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y++LSN +A+A +WKD ++R S++ + + K CSW E++ SHP +I
Sbjct: 120 YILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQI 179
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L L ++++ GY+P T LHD+E+EQK+ L HS + A+ FG IST + IR+
Sbjct: 180 YQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRI 239
Query: 119 INNL 122
NL
Sbjct: 240 FKNL 243
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 79/133 (59%), Gaps = 11/133 (8%)
Query: 1 MINLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK---------- 50
M +L + Y+ +SN YA A +W + A+++ ++R++G++K PA SW EIK
Sbjct: 641 MEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSAND 700
Query: 51 -SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIS 109
SHP +I + L + ME++GY P T ALHDV++ K L YHS RFAI F ++
Sbjct: 701 KSHPEMKKILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMN 760
Query: 110 TPDGRTIRLINNL 122
TPDG I ++ NL
Sbjct: 761 TPDGSPIVVMKNL 773
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 76/124 (61%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+++N Y+AA RW+D A++R ++ +G+ K P CSW E+K SHP +I
Sbjct: 806 YVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQI 865
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ ++ L+ +++ GYVP T L DV++++K+ L HS + A+ FG IST G +R+
Sbjct: 866 SAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRI 925
Query: 119 INNL 122
I NL
Sbjct: 926 IKNL 929
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 80/133 (60%), Gaps = 11/133 (8%)
Query: 1 MINLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS--------- 51
+I N Y L+N Y+A +W++ A +R S+++KG+KK SW +IK+
Sbjct: 610 LIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDD 669
Query: 52 --HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIS 109
HP R I E + +++ +++ G+VP T+ LHD+E+E K+ +L +HS + AI FG I
Sbjct: 670 GLHPQRDAIYEMMAKIWKEIKKMGFVPDTESVLHDLEEELKEQILSHHSEKLAIAFGLIC 729
Query: 110 TPDGRTIRLINNL 122
TP+ T+R++ NL
Sbjct: 730 TPENTTLRIMKNL 742
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+LSN YA A +W D A++R +R++G+KK P CSW E+++ HP +I
Sbjct: 631 YVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVGDANHPEVRQI 690
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L M + GYVP TK LHDVE + K++ L HS + A+ +G + P G T+R+
Sbjct: 691 YNYLEQLVLEMRKIGYVPDTKCVLHDVESDLKEHELSTHSEKLAVAYGFMKLPHGATVRV 750
Query: 119 INNL 122
NL
Sbjct: 751 FKNL 754
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 75/129 (58%), Gaps = 12/129 (9%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK------------SHP 53
N YV+L+N YA A +W++ R+R + KG++K P CSW EIK SHP
Sbjct: 634 NTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHP 693
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+ +I LK + +M++EGY P TK AL + ++ QK+ L HS + A+ FG ++ P
Sbjct: 694 HSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLALPPR 753
Query: 114 RTIRLINNL 122
+T+R+ NL
Sbjct: 754 KTVRVTKNL 762
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+LS+ YA + RW D + R + + G+KKTP CSW E+K SHP +
Sbjct: 483 FVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESM 542
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L E+ME+ GYVP L +VE+E K+ L+ HS R AI F ++TP G TI++
Sbjct: 543 HLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQI 602
Query: 119 INNL 122
+ NL
Sbjct: 603 VKNL 606
>gi|449434268|ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
gi|449533166|ref|XP_004173548.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
Length = 712
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 76/129 (58%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHP 53
N Y +LSN YA+ +W + +++R ++++G+ K P SW IK SHP
Sbjct: 541 NCSAAYTLLSNLYASTGKWTEVSKIRKKMKDEGILKQPGSSWITIKGIKHNFISGDQSHP 600
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+I + L+ L ++++ GYVP K + HDVE EQK+ +L YHS R AI FG IST +G
Sbjct: 601 LSRKIYQKLEWLGGKLKELGYVPDPKFSFHDVETEQKEEMLSYHSERLAIGFGLISTVEG 660
Query: 114 RTIRLINNL 122
TI ++ NL
Sbjct: 661 STIIVMKNL 669
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 76/124 (61%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+++N Y+AA RW+D A++R ++ +G+ K P CSW E+K SHP +I
Sbjct: 563 YVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQI 622
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ ++ L+ +++ GYVP T L DV++++K+ L HS + A+ FG IST G +R+
Sbjct: 623 SAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRI 682
Query: 119 INNL 122
I NL
Sbjct: 683 IKNL 686
>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Glycine max]
Length = 721
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 75/124 (60%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA++ RW + A +R +++ G+ K P SW +K SHP +I
Sbjct: 555 YVLLSNLYASSSRWAEVALIRRKMKHNGVVKKPGSSWLTLKGQKHKFLSADRSHPLAEKI 614
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+ L ++++ GYVP + ALHDVE EQK+ +L YHS R AI FG +ST +G I +
Sbjct: 615 YQKLEWLGVKLKELGYVPDQQFALHDVETEQKEEMLSYHSERLAIAFGLLSTVEGSAITV 674
Query: 119 INNL 122
+ NL
Sbjct: 675 MKNL 678
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 76/125 (60%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y++LSN YAA +W++ AR+R +R++G+KK ACSW E++ SHP +
Sbjct: 623 YMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAV 682
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVE-DEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
+ L+DL + M + GYVP T LHDVE D K+++L HS + A+ FG + P G TIR
Sbjct: 683 YKYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIR 742
Query: 118 LINNL 122
+ NL
Sbjct: 743 IFKNL 747
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 77/123 (62%), Gaps = 11/123 (8%)
Query: 11 VILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRIN 59
V++SN YAAA RW D A +R +V++ G+KK P S E+ +HP +I+
Sbjct: 540 VLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPGMSSIEVNGLVHDFKMGDTAHPLIEKIS 599
Query: 60 EALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLI 119
E L ++ +++++ GY+P T LH++++E+K+ L+YHS + A+ FG IST G IR++
Sbjct: 600 EMLAEMSKKLKEAGYLPDTSVVLHNIDEEEKETALNYHSEKLAMAFGLISTAPGTPIRVV 659
Query: 120 NNL 122
NL
Sbjct: 660 KNL 662
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/124 (38%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y++LSN YA+ W + R+R ++NKG++K P CSW E+K SHP +I
Sbjct: 592 YILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQI 651
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L L M++ GY P L DVE++ K+ +L HS + A+VFG ++TP G +++
Sbjct: 652 IEKLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSEKLAVVFGLLNTPPGYPLQV 711
Query: 119 INNL 122
I NL
Sbjct: 712 IKNL 715
>gi|296082479|emb|CBI21484.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 80/133 (60%), Gaps = 11/133 (8%)
Query: 1 MINLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS--------- 51
+I N Y L+N Y+A +W++ A +R S+++KG+KK SW +IK+
Sbjct: 415 LIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDD 474
Query: 52 --HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIS 109
HP R I E + +++ +++ G+VP T+ LHD+E+E K+ +L +HS + AI FG I
Sbjct: 475 GLHPQRDAIYEMMAKIWKEIKKMGFVPDTESVLHDLEEELKEQILSHHSEKLAIAFGLIC 534
Query: 110 TPDGRTIRLINNL 122
TP+ T+R++ NL
Sbjct: 535 TPENTTLRIMKNL 547
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++ N+ V+VILSN YAAA WK+ A++R + ++G+ K P SW E+ K
Sbjct: 812 LDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDK 871
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
+HP I+ L+ L M Q GYVP T+ LHDVED +K+ L YHS R AI +G + T
Sbjct: 872 THPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKT 931
Query: 111 PDGRTIRLINNL 122
P I + NL
Sbjct: 932 PPLTPIVISKNL 943
>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
Length = 645
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA + +W++ AR+R + N+G+KK ACSW E+K SHP I
Sbjct: 479 YVLLSNIYAESGKWEEAARVRKLMTNRGLKKIIACSWIELKGKFHGFLVGDASHPRSDDI 538
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L+ L + Q GYVP T H+VED++K+N++ HS R AI FG ISTP + +
Sbjct: 539 YEELERLEGLISQTGYVPDTTPVFHNVEDDEKRNMVWGHSERLAIAFGLISTPPRTKLLV 598
Query: 119 INNL 122
NL
Sbjct: 599 TKNL 602
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 77/133 (57%), Gaps = 11/133 (8%)
Query: 1 MINLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI----------- 49
MI+ + VYV LS+ YAAA W++ A++R + ++G++K C+W E+
Sbjct: 658 MIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVVED 717
Query: 50 KSHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIS 109
+SHP I L L +++EGY+P T+ LHDV ++QK+ + YHS + AI +G +S
Sbjct: 718 RSHPLVGEIYAELARLMNAIKREGYIPITQNVLHDVGEQQKEEAISYHSEKLAIAYGVLS 777
Query: 110 TPDGRTIRLINNL 122
P G IR+ NL
Sbjct: 778 LPSGTPIRIYKNL 790
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y++LSN +AA W D +R + +G+KK P CSW E+ SHP I
Sbjct: 598 YILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREI 657
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+DL +++ GY P T LH+V D +K+ LL YHS R A+ F +ST +TIR+
Sbjct: 658 HLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRI 717
Query: 119 INNL 122
NL
Sbjct: 718 FKNL 721
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 75/129 (58%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHP 53
+N YV+LSN YA A +W D AR+R + ++GMKK P C+ E+ K HP
Sbjct: 563 DNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHP 622
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
I L+++ E+++ G+V T E L+D+++E K+ L +HS + AI FG IST G
Sbjct: 623 QSEDIYRMLEEVDEQLKVFGFVADTSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPG 682
Query: 114 RTIRLINNL 122
IR+I NL
Sbjct: 683 TPIRIIKNL 691
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 73/128 (57%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPY 54
N YV+LSN Y+A+R+W D A++R +++KG+ K P CSW EI S HP
Sbjct: 667 NAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGHPR 726
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
I + ++ R+++ GYVP +LHD++ E K+ L YHS + A+ FG ++ P
Sbjct: 727 EAEIYTKIDEIILRIKEAGYVPDMSFSLHDMDKEGKEVGLAYHSEKLAVAFGLLAAPPSA 786
Query: 115 TIRLINNL 122
IR+ NL
Sbjct: 787 PIRIFKNL 794
>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
Length = 771
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 74/128 (57%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPY 54
N+ V+LSN YAA R D AR+R +++ G+KK SW EI SHP
Sbjct: 601 NVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPR 660
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+L I L+ L +++ GYVP TK L DV++E+K LL YHS R A+ G ISTP G
Sbjct: 661 KLEIYSELERLHREIKEAGYVPDTKMVLRDVDEEKKAQLLGYHSERLAMALGIISTPPGT 720
Query: 115 TIRLINNL 122
T+R++ NL
Sbjct: 721 TLRVVKNL 728
>gi|242055215|ref|XP_002456753.1| hypothetical protein SORBIDRAFT_03g041980 [Sorghum bicolor]
gi|241928728|gb|EES01873.1| hypothetical protein SORBIDRAFT_03g041980 [Sorghum bicolor]
Length = 521
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/124 (39%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWT-----------EIKSHPYRLRI 58
YV+LSN Y+ ARRW D AR+R ++ +G+ K P CSW E + HP I
Sbjct: 355 YVMLSNLYSRARRWGDVARIRALMKARGITKEPGCSWVGVNGVTHLFHVEDRGHPRAAEI 414
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
++++ ER+ EGYVP T AL D E ++ L YHS R A+ FG ++ P IR+
Sbjct: 415 YRKVEEMTERIRAEGYVPDTDWALQDEAPEGRERGLAYHSERLAVAFGLLAVPAAAPIRV 474
Query: 119 INNL 122
NL
Sbjct: 475 FKNL 478
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++ N+ V+VILSN YAAA WK+ A++R + ++G+ K P SW E+ K
Sbjct: 812 LDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDK 871
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
+HP I+ L+ L M Q GYVP T+ LHDVED +K+ L YHS R AI +G + T
Sbjct: 872 THPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKT 931
Query: 111 PDGRTIRLINNL 122
P I + NL
Sbjct: 932 PPLTPIVISKNL 943
>gi|293334801|ref|NP_001169361.1| uncharacterized protein LOC100383228 [Zea mays]
gi|224028917|gb|ACN33534.1| unknown [Zea mays]
Length = 596
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA+ RW D R+R ++R+ +KK P S+TEI K H I
Sbjct: 430 YVLLSNVYASKSRWVDVGRVRDTMRSNDVKKVPGFSYTEIDGVMHKFINGDKEHMRWREI 489
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
AL ++ R+ GY P T LHD+ +E+K+ L YHS + AI FG ISTP G TIR+
Sbjct: 490 YRALDEIGSRICALGYEPETSNVLHDIGEEEKQYALSYHSEKLAIAFGLISTPPGETIRV 549
Query: 119 INNL 122
I NL
Sbjct: 550 IKNL 553
>gi|413952609|gb|AFW85258.1| hypothetical protein ZEAMMB73_606432 [Zea mays]
gi|413952610|gb|AFW85259.1| hypothetical protein ZEAMMB73_606432 [Zea mays]
gi|413952611|gb|AFW85260.1| hypothetical protein ZEAMMB73_606432 [Zea mays]
Length = 630
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA+ RW D R+R ++R+ +KK P S+TEI K H I
Sbjct: 464 YVLLSNVYASKSRWVDVGRVRDTMRSNDVKKVPGFSYTEIDGVMHKFINGDKEHMRWREI 523
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
AL ++ R+ GY P T LHD+ +E+K+ L YHS + AI FG ISTP G TIR+
Sbjct: 524 YRALDEIGSRICALGYEPETSNVLHDIGEEEKQYALSYHSEKLAIAFGLISTPPGETIRV 583
Query: 119 INNL 122
I NL
Sbjct: 584 IKNL 587
>gi|414876781|tpg|DAA53912.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 878
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/124 (41%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRL-----------RI 58
YVILSN YA A W+ AR++ +R++G++K SW EIK Y I
Sbjct: 325 YVILSNIYAKAGNWEGAARVKKIMRDRGVRKESGNSWVEIKQKIYMFSSNDHTNPMIDEI 384
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L+ L+E M+++GY P T ALH V+++QK L YHS R AI F I+TP G I +
Sbjct: 385 KEELERLYEEMDKQGYEPDTSCALHMVDNKQKLESLKYHSERLAIAFALINTPPGTPITV 444
Query: 119 INNL 122
+ NL
Sbjct: 445 MKNL 448
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 50/124 (40%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA+ + W R+R ++N G+KK CSW EIK SHP I
Sbjct: 495 YVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIKNKVHMLLAGDNSHPMMTAI 554
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L L M + G+ P+ LHDVE+++K N+L HS + A+ G IST G +R+
Sbjct: 555 TEKLNQLTIEMNRLGFAPSRDFVLHDVEEQEKDNILAVHSEKLAVALGLISTRPGTPLRV 614
Query: 119 INNL 122
I NL
Sbjct: 615 IKNL 618
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y++LSN +AA W D +R + +G+KK P CSW E+ SHP I
Sbjct: 839 YILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREI 898
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+DL +++ GY P T LH+V D +K+ LL YHS R A+ F +ST +TIR+
Sbjct: 899 HLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRI 958
Query: 119 INNL 122
NL
Sbjct: 959 FKNL 962
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 75/129 (58%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHP 53
N +YV LS YAAA W+D A+LR ++ +G+KK P SW EI +SHP
Sbjct: 633 QNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVARDQSHP 692
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
I L+ L ++M+ GYVP T+ +HD++DE K+ + +HS + AI +G ISTP G
Sbjct: 693 RTQEIYAELETLKKQMKSLGYVPDTRFVMHDLDDEGKERAVCHHSEKLAIAYGLISTPPG 752
Query: 114 RTIRLINNL 122
IR+ NL
Sbjct: 753 TPIRISKNL 761
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+LSN YA + RW D AR+R + +KG+KK P CS EI S HP I
Sbjct: 519 YVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIGDKFHPQNKEI 578
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+++ + + G+V T E L ++E+E K+ L YHS + AI FG IST G +R+
Sbjct: 579 YKMLEEIDSLLAETGFVSDTSEVLQEMEEELKEGALSYHSEKLAIAFGLISTKPGTKLRI 638
Query: 119 INNL 122
+ NL
Sbjct: 639 VKNL 642
>gi|449521367|ref|XP_004167701.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like, partial [Cucumis sativus]
Length = 390
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 71/128 (55%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPY 54
++ Y++LSN +A RRW +R +R + +KK P SW EI++ HP
Sbjct: 220 DVGTYILLSNMHARVRRWDHVVEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPE 279
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
I E +KDL ++ GYVP LHD+EDEQK + L YHS + A+ +G + TP G
Sbjct: 280 ANLIYENVKDLLSKIRPLGYVPDIDNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTPSGA 339
Query: 115 TIRLINNL 122
IR+I NL
Sbjct: 340 PIRVIKNL 347
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 74/124 (59%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
Y++LSN Y+AA W D AR+R +R++G+KK P CSW E + HP +
Sbjct: 636 YILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPEAHEV 695
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+ + +M + GYVP TK LHD+E QK+++L HS R A+ FG ++ P G T+ +
Sbjct: 696 YKFLEMVGAKMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLNLPPGATVTV 755
Query: 119 INNL 122
+ NL
Sbjct: 756 LKNL 759
>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
gi|194705708|gb|ACF86938.1| unknown [Zea mays]
gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
Length = 635
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
I N YV L+N YA+ + + +R ++ +G+ K PA SW E+ K
Sbjct: 461 IEPENPATYVTLANIYASVGLFDEVENMRRTMELRGITKMPASSWIEVGTRVHVFLVGDK 520
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP I LK L+ +M +EGYV T LHDVEDEQK+ + YHS R A+ FG I+T
Sbjct: 521 SHPQAEEIYALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIAT 580
Query: 111 PDGRTIRLINNL 122
P G I++ NL
Sbjct: 581 PKGSPIKVFKNL 592
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++L+N VYV LS+ YAAA W A+LR + +G+ K P SW ++ +
Sbjct: 728 LDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDR 787
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP +I L L M+ +GYVP T+ +HDV++ +K+N + +HS R AI +G IST
Sbjct: 788 SHPQSEKIYAELDRLTHAMKMKGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLIST 847
Query: 111 PDGRTIRLINNL 122
P G I + NL
Sbjct: 848 PPGTRIHIFKNL 859
>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
Length = 713
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 74/128 (57%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPY 54
N+ V+LSN YAA R D AR+R +++ G+KK SW EI SHP
Sbjct: 543 NVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPR 602
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+L I L+ L +++ GYVP TK L DV++E+K LL YHS R A+ G ISTP G
Sbjct: 603 KLEIYSELERLHREIKEAGYVPDTKMVLRDVDEEKKVQLLGYHSERLAMALGIISTPPGT 662
Query: 115 TIRLINNL 122
T+R++ NL
Sbjct: 663 TLRVVKNL 670
>gi|242095216|ref|XP_002438098.1| hypothetical protein SORBIDRAFT_10g007970 [Sorghum bicolor]
gi|241916321|gb|EER89465.1| hypothetical protein SORBIDRAFT_10g007970 [Sorghum bicolor]
Length = 596
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA+ RW D R+R ++R+ +KK P S+TEI K H I
Sbjct: 430 YVLLSNVYASKSRWVDVGRVRDTMRSNDVKKVPGFSYTEIDGVMHKFINGDKEHLRWREI 489
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
AL ++ ++ + GY P T LHD+ +E+K+ L YHS + AI FG ISTP G TIR+
Sbjct: 490 YRALDEIGSKICELGYEPETSNVLHDIGEEEKQYALSYHSEKLAIAFGLISTPPGETIRV 549
Query: 119 INNL 122
I NL
Sbjct: 550 IKNL 553
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Vitis vinifera]
Length = 1058
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN +A+ W A +R ++++G+ K P SW ++K +H I
Sbjct: 892 YVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEI 951
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
ALK+ + GY+P T LHDVE+EQK+N L YHS + A+VFG +STP+G I++
Sbjct: 952 YSALKEYYGCFRATGYMPDTNFVLHDVEEEQKQNELLYHSEKLAVVFGILSTPNGSPIQI 1011
Query: 119 INNL 122
I NL
Sbjct: 1012 IKNL 1015
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN Y+A+ +W+D A++R + +G+KK P SW E+ SHP +I
Sbjct: 453 YVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEFLVGDTSHPLSEKI 512
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L +L + ++ GYVPTT L D+E+E+K++ + HS + AI FG IST IR+
Sbjct: 513 YAKLGELVKDLKASGYVPTTDYVLFDIEEEEKEHFIGCHSEKLAIAFGLISTAPNDKIRV 572
Query: 119 INNL 122
+ NL
Sbjct: 573 VKNL 576
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 75/130 (57%), Gaps = 12/130 (9%)
Query: 4 LNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------H 52
+N+M YV+LSN Y+AA +W+D AR+R +R++G+ K P SW E S H
Sbjct: 343 MNSMP-YVMLSNMYSAAGKWEDAARIRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNH 401
Query: 53 PYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPD 112
P R I + ++ +++ GYVP ALHD +DE K+ L YHS + A+ FG ++ P
Sbjct: 402 PLRNEIYSKIDEIIMLIKEAGYVPDMSFALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQ 461
Query: 113 GRTIRLINNL 122
G IR+ NL
Sbjct: 462 GAPIRIFKNL 471
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 74/124 (59%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YAAA +WK+ +R + + +KK CSW +IK SHP +I
Sbjct: 708 YVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQI 767
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ LK + R++Q+GY P T LHD+ ++QK+ +L HS R A+ FG I+TP G +++
Sbjct: 768 YKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQI 827
Query: 119 INNL 122
+ NL
Sbjct: 828 VKNL 831
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 74/124 (59%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YAAA +WK+ +R + + +KK CSW +IK SHP +I
Sbjct: 708 YVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQI 767
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ LK + R++Q+GY P T LHD+ ++QK+ +L HS R A+ FG I+TP G +++
Sbjct: 768 YKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQI 827
Query: 119 INNL 122
+ NL
Sbjct: 828 VKNL 831
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN Y+A +W + A++R+S+ K ++K P CSW E+ K HP +I
Sbjct: 520 YVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKI 579
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L +L ++M+ GYVPTT L D+E+E+K++ L HS + AI FG IS IR+
Sbjct: 580 YAKLDELTKKMKVAGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRV 639
Query: 119 INNL 122
+ NL
Sbjct: 640 VKNL 643
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 75/129 (58%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HP 53
N YV+LSN YA RW + A++R +R++ ++K PACSW E+++ HP
Sbjct: 626 QNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHP 685
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
L + L+ L M++ GY+P TK LHD+E EQK++ L HS + A+ FG + P G
Sbjct: 686 EVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPG 745
Query: 114 RTIRLINNL 122
T+R+ N+
Sbjct: 746 ATVRVFKNI 754
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YAAA +W + R ++ +KK P SW E+K S+P I
Sbjct: 831 YVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELI 890
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ +KD+ ++QEGYVP T L DVE+E+K+ L+YHS + A+ FG +STP IR+
Sbjct: 891 YKKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRV 950
Query: 119 INNL 122
I NL
Sbjct: 951 IKNL 954
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+LSN Y+AA A R S+RN G++K P SW EIK HP I
Sbjct: 1040 YVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSWVEIKGEVHAFSVGSEDHPCMRVI 1099
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
N L+ L + +EGYVP T E LHD+E+EQK +L HS R A+ +G + TP G IR+
Sbjct: 1100 NAMLEWLNLKAIREGYVPDTDEVLHDLEEEQKVRMLWVHSERLALAYGLVMTPPGHPIRI 1159
Query: 119 INNL 122
+ NL
Sbjct: 1160 MKNL 1163
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 73/128 (57%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPY 54
N YV+L+N YA A +W++ +LR + +G+KK P CSW E+KS HP
Sbjct: 401 NTGYYVLLANTYAEAEKWEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQ 460
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+I LK L +M++EGY P T+ AL + + QK+ L HS + A+ FG ++ P R
Sbjct: 461 AKKIEVLLKRLRSKMKEEGYFPKTRYALINADSLQKETALCGHSEKLAMAFGILNLPPAR 520
Query: 115 TIRLINNL 122
TIR+ NL
Sbjct: 521 TIRVSKNL 528
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 75/129 (58%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHP 53
+N YV+LSN YA A W++ +LR ++ +GMKK+P CSW EI KSHP
Sbjct: 518 DNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHP 577
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
I + L+ L E+++ GY+P T LHD+ +E+K+ L HS + AI FG ++T G
Sbjct: 578 QAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPG 637
Query: 114 RTIRLINNL 122
+R+ NL
Sbjct: 638 VVLRVTKNL 646
>gi|297735590|emb|CBI18084.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN Y+A +W + A++R+S+ K ++K P CSW E+ K HP +I
Sbjct: 330 YVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKI 389
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L +L ++M+ GYVPTT L D+E+E+K++ L HS + AI FG IS IR+
Sbjct: 390 YAKLDELTKKMKVAGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRV 449
Query: 119 INNL 122
+ NL
Sbjct: 450 VKNL 453
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 75/128 (58%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPY 54
N YV+LSN YAA W + +R + + G+KK P CSW ++K SHP
Sbjct: 590 NPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQ 649
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+I E + ++ + M + G+ P ALHDVE+++++ +L HS + A+VFG ++TPDG
Sbjct: 650 IDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGT 709
Query: 115 TIRLINNL 122
+++I NL
Sbjct: 710 PLQVIKNL 717
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 73/128 (57%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPY 54
N Y+ LSN YA A W + ++R + N+G+ K P SW EIK SHP
Sbjct: 499 NPATYITLSNIYANAGLWTEETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPK 558
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
I+E L +L ++M++EGYV T LHDVE+EQK+ + YHS + A+ FG IST G
Sbjct: 559 ISDIHEYLGELSKKMKEEGYVADTNFVLHDVEEEQKEQNIFYHSEKLAVAFGIISTSPGT 618
Query: 115 TIRLINNL 122
I++ NL
Sbjct: 619 PIKVFKNL 626
>gi|115473893|ref|NP_001060545.1| Os07g0662700 [Oryza sativa Japonica Group]
gi|24414187|dbj|BAC22429.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113612081|dbj|BAF22459.1| Os07g0662700 [Oryza sativa Japonica Group]
gi|125559498|gb|EAZ05034.1| hypothetical protein OsI_27217 [Oryza sativa Indica Group]
gi|125601406|gb|EAZ40982.1| hypothetical protein OsJ_25464 [Oryza sativa Japonica Group]
Length = 544
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
+V+LSN YAA RW +R ++R+KG++K P CS EI KSHP I
Sbjct: 378 HVLLSNLYAAVGRWSGVEDVRRTMRSKGIEKIPGCSSIEINDSIHEFVSGDKSHPSYNDI 437
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L ++ RM+Q+GYV T E +DVE+E+K+ L +HS + AI FG I P IR+
Sbjct: 438 HAKLAEISARMQQQGYVTETAEVFYDVEEEEKEQALGHHSEKLAIAFGLIGGPPNVAIRI 497
Query: 119 INNL 122
+ NL
Sbjct: 498 VKNL 501
>gi|302780908|ref|XP_002972228.1| hypothetical protein SELMODRAFT_97343 [Selaginella moellendorffii]
gi|300159695|gb|EFJ26314.1| hypothetical protein SELMODRAFT_97343 [Selaginella moellendorffii]
Length = 487
Score = 99.0 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 53/124 (42%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACS-----------WTEIKSHPYRLRI 58
YV LSN YAAA W R+R +++ G++K P S W KSHP I
Sbjct: 321 YVSLSNIYAAAGEWDQVDRVRSAMKAMGLQKDPGRSSIEVNSRVHEFWAGDKSHPRAAEI 380
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L +ME GYVP TK L +V +EQK+ LL +HS + AI FG +STP G ++R+
Sbjct: 381 YGLLESLTRQMEGSGYVPDTKLVLLNVSEEQKERLLCFHSEKLAIAFGLLSTPAGSSLRI 440
Query: 119 INNL 122
I NL
Sbjct: 441 IKNL 444
>gi|302804779|ref|XP_002984141.1| hypothetical protein SELMODRAFT_119895 [Selaginella moellendorffii]
gi|300147990|gb|EFJ14651.1| hypothetical protein SELMODRAFT_119895 [Selaginella moellendorffii]
Length = 487
Score = 99.0 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 53/124 (42%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACS-----------WTEIKSHPYRLRI 58
YV LSN YAAA W R+R +++ G++K P S W KSHP I
Sbjct: 321 YVSLSNIYAAAGEWDQVDRVRSAMKAMGLQKDPGRSSIEVNSRVHEFWAGDKSHPRAAEI 380
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L +ME GYVP TK L +V +EQK+ LL +HS + AI FG +STP G ++R+
Sbjct: 381 YGLLESLTRQMEGSGYVPDTKLVLLNVSEEQKERLLCFHSEKLAIAFGLLSTPAGSSLRI 440
Query: 119 INNL 122
I NL
Sbjct: 441 IKNL 444
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
Y++LS+ YAA +W + A+LR +R KG +K P SW + KS P+ +I
Sbjct: 577 YILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWIKYKSKVYIFSADDQSSPFSDQI 636
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L +M +EGYVP LHDVED +K +L++HS + AI FG + P G IR+
Sbjct: 637 YAELEKLNHKMIEEGYVPDASSVLHDVEDSEKMKMLNHHSEKLAIAFGLLFIPHGLPIRV 696
Query: 119 INNL 122
+ NL
Sbjct: 697 VKNL 700
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 75/129 (58%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHP 53
+N YV+LSN YA A W++ +LR ++ +GMKK+P CSW EI KSHP
Sbjct: 444 DNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHP 503
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
I + L+ L E+++ GY+P T LHD+ +E+K+ L HS + AI FG ++T G
Sbjct: 504 QAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPG 563
Query: 114 RTIRLINNL 122
+R+ NL
Sbjct: 564 VVLRVTKNL 572
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA A RW++ +LR V+++G KK+P CSW EI SHP I
Sbjct: 476 YVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEI 535
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L E+M+ GY P T LHD+ +E+K+ L HS + A+ FG ++TP +R+
Sbjct: 536 YMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAETVLRV 595
Query: 119 INNL 122
NL
Sbjct: 596 TKNL 599
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA A RW++ +LR V+++G KK+P CSW EI SHP I
Sbjct: 513 YVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEI 572
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L E+M+ GY P T LHD+ +E+K+ L HS + A+ FG ++TP +R+
Sbjct: 573 YMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAETVLRV 632
Query: 119 INNL 122
NL
Sbjct: 633 TKNL 636
>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 682
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 76/129 (58%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSW-----------TEIKSHP 53
+++ YV+LSN YA A RW ++R +R + ++K+P SW +E K HP
Sbjct: 511 SDVGTYVLLSNMYAKANRWDGVVKVRKHMRERAVRKSPGVSWIHVGSDVHVFTSEEKVHP 570
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+I + L++L ++++ GYVP LHD++DE+K+ L YHS + A+ FG I TP G
Sbjct: 571 QMDQIAKKLEELIDQIKAIGYVPNFAVVLHDIDDERKEEHLMYHSEKLALAFGLIHTPKG 630
Query: 114 RTIRLINNL 122
TI ++ NL
Sbjct: 631 ATIHIMKNL 639
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 74/132 (56%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
I N YV L+N YA+A + A +R ++ ++G+ K P SW EI+
Sbjct: 550 IEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGMSWIEIRREVHVFSVGDN 609
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP I E L +L +RM++ GYVP T LHDVE EQK+ L YHS + A+ FG IST
Sbjct: 610 SHPKSKEILEYLSELSKRMKEVGYVPDTNFVLHDVELEQKEENLSYHSEKLAVAFGIIST 669
Query: 111 PDGRTIRLINNL 122
P G I++ NL
Sbjct: 670 PSGTPIKVFKNL 681
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 76/124 (61%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YVILSN YA+A +W+D +R ++ K + K P SW E+ +HP R +
Sbjct: 500 YVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEV 559
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ +K+L + +++GYVP L+DV++EQK+ +L HS + A+ FG I+TP+G TIR+
Sbjct: 560 AKKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRV 619
Query: 119 INNL 122
I NL
Sbjct: 620 IKNL 623
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
Y++LSN YA+ RW+D ++R ++ KG+KKTP CS E+ H I
Sbjct: 532 YILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEI 591
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
A++D+ ++++ GYVP T EA D E++ K++ + +HS + AI FG I +P G TIR+
Sbjct: 592 YNAIEDMMKQIKSAGYVPNTAEARLDAEEDDKESSVSHHSEKLAIAFGLIKSPPGTTIRI 651
Query: 119 INNL 122
NL
Sbjct: 652 TKNL 655
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 72/125 (57%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK------------SHPYRLR 57
Y++L+N YA+ RW D + +R +R +G++K PA SW E + +HP
Sbjct: 487 YILLANIYASCGRWNDVSTVRKLMRTRGLRKNPAFSWIESEKGMVHEFFSGDMTHPRSGE 546
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I +AL+DL +R+E +GY P +DV DE K+ +L HS + A+ FG IST G IR
Sbjct: 547 IKQALEDLLDRLEAKGYQPHLSSVSYDVNDEDKRRILMTHSEKLALAFGLISTIPGSKIR 606
Query: 118 LINNL 122
++ NL
Sbjct: 607 IVKNL 611
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA A +W+ A+ R + + +KK P +W E+ +SHP I
Sbjct: 407 YVLLSNIYAKAGKWEKVAKFRDMMTQRKLKKIPGWTWIEVDNKTYQFSVGDRSHPQSKEI 466
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L L +++E GYVP T L DVE+E K+ +L+ HS + AI FG I+ P+G IR+
Sbjct: 467 YEMLMSLIKKLEMAGYVPDTDFVLQDVEEEVKQEMLYTHSEKLAIAFGLIAIPEGEPIRI 526
Query: 119 INNL 122
NL
Sbjct: 527 SKNL 530
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YAAA W++ +R + + +KK P SW E+K +HP +I
Sbjct: 701 YVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQI 760
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L +L R++ GY P TK HD+EDEQK+ +L +HS R AI FG I+TP I++
Sbjct: 761 YSKLSELSIRLKDAGYQPDTKNVFHDIEDEQKETILSHHSERLAIAFGLIATPPEIPIQI 820
Query: 119 INNL 122
+ NL
Sbjct: 821 VKNL 824
>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 641
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
I N YV L+N YA+ + + +R + +KG+ K PA SW E+ K
Sbjct: 467 IEPENPATYVTLANIYASVGLFDEVEDVRRIMESKGITKMPASSWIEVGRRVHVFLVGDK 526
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP I LK L+ +M +EGYV + LHDVEDEQK+ + YHS R A+ FG I+T
Sbjct: 527 SHPKADEIYALLKKLYVKMVEEGYVADIEFVLHDVEDEQKEQDIGYHSERLAVAFGIIAT 586
Query: 111 PDGRTIRLINNL 122
P+G I++ NL
Sbjct: 587 PEGSPIKVFKNL 598
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 79/133 (59%), Gaps = 12/133 (9%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++L+N YV++SN +AA RWKD +R+ ++ G+ K P CSW E+ K
Sbjct: 660 LDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDK 719
Query: 51 SHPYRLRINEALKDLFERMEQE-GYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIS 109
HP +I + L + E++++E GYV TK LH+V +E+K +L+ HS R AI +G ++
Sbjct: 720 LHPECDKIYQKLAQVTEKLKREGGYVAQTKFVLHNVGEEEKVQMLYGHSERLAIAYGLLA 779
Query: 110 TPDGRTIRLINNL 122
T +G IR+ NL
Sbjct: 780 TAEGTPIRVTKNL 792
>gi|302765332|ref|XP_002966087.1| hypothetical protein SELMODRAFT_84768 [Selaginella moellendorffii]
gi|300166901|gb|EFJ33507.1| hypothetical protein SELMODRAFT_84768 [Selaginella moellendorffii]
Length = 449
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y +L N YAA R+ D R+R S+ ++G+KK P S+ E+K +HP R I
Sbjct: 283 YTLLGNVYAATERYGDQMRVRKSMTDRGLKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEI 342
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L RM + GYVP TK+ LH V +E+K+ L+ HS + AI FG I+TP G + +
Sbjct: 343 LLELEKLGGRMREAGYVPNTKDVLHAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLI 402
Query: 119 INNL 122
+ NL
Sbjct: 403 VKNL 406
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y++LSN YA A RW+D A+ R + + +KK P +W E+ +HP I
Sbjct: 695 YILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEI 754
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E LK L ++E GYVP T LHDV++E K +L+ HS + AI FG I+TP+ IR+
Sbjct: 755 YEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRI 814
Query: 119 INNL 122
I NL
Sbjct: 815 IKNL 818
>gi|358345892|ref|XP_003637008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502943|gb|AES84146.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 74/129 (57%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTE-----------IKSHP 53
+N Y +LSN YA ARRWKD AR+R ++ G+KK P SW + ++H
Sbjct: 476 DNDGTYTLLSNIYANARRWKDVARIRYLMKRTGIKKRPGWSWVKGRKGMETFYVGDRTHL 535
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+I E L DL +R++ GYVP T +LHDV+DE+K + L HS + A+ + ++ P G
Sbjct: 536 QSQKIYETLADLIKRIKAIGYVPQTNFSLHDVDDEEKGDQLLEHSEKLALAYAILTLPPG 595
Query: 114 RTIRLINNL 122
IR+ NL
Sbjct: 596 APIRITKNL 604
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 74/132 (56%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++ +N VYV LS+ YAAA W A+LR + +G+ K P SW E+ +
Sbjct: 846 LDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDR 905
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP +I L L M+ EGYVP T+ +HDV++ +K+N + +HS R AI +G IST
Sbjct: 906 SHPESEKIYAELDKLTHAMKMEGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLIST 965
Query: 111 PDGRTIRLINNL 122
G IR+ NL
Sbjct: 966 LPGTPIRIFKNL 977
>gi|190612743|gb|ACE80749.1| pentatricopeptide repeat protein [Lepidogyna hodgsoniae]
Length = 143
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 74/129 (57%), Gaps = 11/129 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
++ N YV++SN YAA+ +W+ +A ++ +G+KK P CSW E+
Sbjct: 15 LDPGNAGAYVLMSNIYAASGKWESSASVQELRLQRGVKKQPGCSWIEVNKQLHSFAAGDL 74
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP + I E L+ LF ++ GYVP T LHDV++ +K+ L +HS + AI FG IST
Sbjct: 75 SHPQKAGILEELERLFGLIKVAGYVPDTSFVLHDVDENKKEVRLCHHSEKLAIAFGLIST 134
Query: 111 PDGRTIRLI 119
P G +R+
Sbjct: 135 PPGTPLRIF 143
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
Y++LSN Y+AA RW D AR+R +R++G+KK P CSW E+ HP +
Sbjct: 638 YILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDTKHPDAHEV 697
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ + +M + GYVP TK AL D+ +K+ +L HS R A+ FG + P G T+ +
Sbjct: 698 YRFLEMVGAKMRKLGYVPDTKFALQDMAPHEKEYVLFAHSERLAVSFGLLKLPAGATVTV 757
Query: 119 INNL 122
+ NL
Sbjct: 758 LKNL 761
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y++LSN YA A RW+D A+ R + + +KK P +W E+ +HP I
Sbjct: 539 YILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEI 598
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E LK L ++E GYVP T LHDV++E K +L+ HS + AI FG I+TP+ IR+
Sbjct: 599 YEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRI 658
Query: 119 INNL 122
I NL
Sbjct: 659 IKNL 662
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS---------- 51
I N YV+LSN YA A RW + A++R + +KGMKK P CS EI S
Sbjct: 567 IEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDK 626
Query: 52 -HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
HP I L+++ +E+ G+VP T E L ++E+E K+ L +HS + AI FG IST
Sbjct: 627 FHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIST 686
Query: 111 PDGRTIRLINNL 122
G + ++ NL
Sbjct: 687 KPGTKLTIVKNL 698
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YVILSN YA+A RW+D LR + K + K P SW E+ SHP R +
Sbjct: 468 YVILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSHPRREEV 527
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ +++L R ++ GYVP LHDV++EQK+ +L HS + A+ FG I+TP+ IR+
Sbjct: 528 SAKVQELSARFKEAGYVPDLSCVLHDVDEEQKEKILLSHSEKLALTFGLIATPESVPIRV 587
Query: 119 INNL 122
I NL
Sbjct: 588 IKNL 591
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 77/128 (60%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPY 54
N Y L+N Y+A +W++ A++R S+++ +KK SW E+K +HP
Sbjct: 616 NSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPE 675
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+ I +K +++ +++ GYVP T LHD+E+E K+ +L +HS + AI FG ISTPD
Sbjct: 676 KNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKT 735
Query: 115 TIRLINNL 122
T+R++ NL
Sbjct: 736 TLRIMKNL 743
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 75/124 (60%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YVILSN YA+A +W+D +R ++ K + K P SW E+ +HP R +
Sbjct: 472 YVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEV 531
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+K+L + +++GYVP L+DV++EQK+ +L HS + A+ FG I+TP+G TIR+
Sbjct: 532 ANKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRV 591
Query: 119 INNL 122
I NL
Sbjct: 592 IKNL 595
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 74/129 (57%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HP 53
N YV+LSN YA RW D A++R +R++ ++K PACSW E+++ HP
Sbjct: 626 QNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHP 685
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
L + L+ L M++ GY+P TK LHD+E EQK++ L HS + A+ FG + P
Sbjct: 686 EVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPD 745
Query: 114 RTIRLINNL 122
T+R+ N+
Sbjct: 746 ATVRVFKNI 754
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 71/129 (55%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHP 53
+N VYV+L N YAA +RW D LR + +KG+KKTP CS E+ +SHP
Sbjct: 552 DNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHP 611
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
I+ L + + ++ GY P E D+ +E K+N + HS + AI FG I++P G
Sbjct: 612 QTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPG 671
Query: 114 RTIRLINNL 122
TIR+ NL
Sbjct: 672 VTIRITKNL 680
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+L+N YA+A RW+D A++R + ++G+KK P S E +S HP I
Sbjct: 403 YVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEI 462
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L ++ E + GYVP T LHD+++E+K+N L+YHS + AI FG + T G T+R+
Sbjct: 463 YAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFGLLKTKPGETLRI 522
Query: 119 INNL 122
NL
Sbjct: 523 SKNL 526
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA+ + W RLR ++ G+KK CSW EIK SHP I
Sbjct: 498 YVLLSNIYASKKMWDGVNRLRDMMKTVGLKKEKGCSWIEIKNKVHMLLAGDSSHPMMAAI 557
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E LK L M + G+ P+T LHDVE+++K ++L HS + A+ G IST G +++
Sbjct: 558 TEKLKHLTMEMRRLGFAPSTDYVLHDVEEQEKDDILSVHSEKLAVALGLISTSHGTPLQV 617
Query: 119 INNL 122
I NL
Sbjct: 618 IKNL 621
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 72/131 (54%), Gaps = 11/131 (8%)
Query: 3 NLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS----------- 51
NL N YV+LSN YAAA W+ AR+R ++ G +K P CS E+ +
Sbjct: 271 NLANSGTYVLLSNIYAAAGNWEGVARVRTLMKESGFEKEPGCSSIEVNNKVHEFLAGDLR 330
Query: 52 HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTP 111
HP I E L+++ ++ GY P T LHD+ED QK+ L HS + A+ FG I+T
Sbjct: 331 HPKSREIYEMLEEINGWLKTHGYTPQTDIVLHDLEDAQKERSLGVHSEKLALAFGLITTK 390
Query: 112 DGRTIRLINNL 122
G TI+++ NL
Sbjct: 391 PGTTIKIVKNL 401
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+ SN A + +W+D LR + + +KK PACSW ++K HP RI
Sbjct: 1558 YVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRI 1617
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L +L + ++ GYVP T ALHD+++EQK+ L HS R A+ FG I+TP+ T+R+
Sbjct: 1618 SAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRI 1677
Query: 119 INNL 122
NL
Sbjct: 1678 FKNL 1681
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+L+N YA+A RW+D A++R + ++G+KK P S E +S HP I
Sbjct: 458 YVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEI 517
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L ++ E + GYVP T LHD+++E+K+N L+YHS + AI FG + T G T+R+
Sbjct: 518 YAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFGLLKTKPGETLRI 577
Query: 119 INNL 122
NL
Sbjct: 578 SKNL 581
>gi|190612851|gb|ACE80803.1| pentatricopeptide repeat protein [Cycas revoluta]
Length = 152
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRINEALKDLF 66
A A RW D ++R ++N G K P SW EIK SHP +I L+ L
Sbjct: 1 AVAGRWADVEKVRKLMKNVGATKEPGYSWIEIKNKVHAFVAGDRSHPQAEKIYAKLERLT 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
M++ GY+P T+ LHDVE+EQK+ L YHS + AI FG ISTP G IR+I NL
Sbjct: 61 GEMKETGYMPHTEFVLHDVEEEQKEQFLFYHSEKLAIAFGLISTPAGTPIRVIKNL 116
>gi|414879360|tpg|DAA56491.1| TPA: hypothetical protein ZEAMMB73_164599 [Zea mays]
Length = 520
Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 49/124 (39%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWT-----------EIKSHPYRLRI 58
YV+LSN Y+ ARRW D AR+R ++ +G+ K P CSW E + HP I
Sbjct: 354 YVMLSNLYSRARRWGDVARIRALMKARGVTKEPGCSWVGVNGITHLFHVEDRDHPRAAEI 413
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
++++ ER+ EGYVP T AL D E ++ L YHS R A+ FG ++ P IR+
Sbjct: 414 YRKVEEMTERIRVEGYVPDTDWALQDEVPEWRQRGLAYHSERLAVAFGLLAVPAAAPIRV 473
Query: 119 INNL 122
NL
Sbjct: 474 FKNL 477
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA+ + W R+R +++ G+KK CSW EIK SHP I
Sbjct: 499 YVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIEIKNKVHMLLAGDDSHPMMTAI 558
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E + L +M + G+VP+T LHDVE+++K ++L HS + A+ G IST G T+R+
Sbjct: 559 IEKINQLNIQMRKLGFVPSTDFVLHDVEEQEKDDILAVHSEKLAVALGLISTSPGTTLRV 618
Query: 119 INNL 122
I NL
Sbjct: 619 IKNL 622
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+ SN A + +W+D LR + + +KK PACSW ++K HP RI
Sbjct: 908 YVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRI 967
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L +L + ++ GYVP T ALHD+++EQK+ L HS R A+ FG I+TP+ T+R+
Sbjct: 968 SAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRI 1027
Query: 119 INNL 122
NL
Sbjct: 1028 FKNL 1031
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 77/129 (59%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HP 53
+N YV+L+N YA A RWKD R+R+ V+++G+ K P S E+K HP
Sbjct: 495 SNCGYYVLLANIYADAGRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHP 554
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+I + L++L ++++ GYVP LHDV++E+K+ ++ HS + A+ FG +++ G
Sbjct: 555 QHEKIYKYLEELSVKLQEAGYVPNMASVLHDVDEEEKEMIVRVHSEKLAVAFGVMNSIPG 614
Query: 114 RTIRLINNL 122
TI +I NL
Sbjct: 615 STIHVIKNL 623
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA A W++ A++R + K +KK SW E+K SHP RI
Sbjct: 700 YVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRI 759
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L++L R++ GY P TK LHDVE+E K+ +L HS R AI FG I+TP G I++
Sbjct: 760 YLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQI 819
Query: 119 INNL 122
+ NL
Sbjct: 820 VKNL 823
>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
gi|194695290|gb|ACF81729.1| unknown [Zea mays]
Length = 539
Score = 97.4 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN A + RW+D +++R ++R + ++K P SW E+K SH + I
Sbjct: 373 YVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREI 432
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L+++ R+ Q GY P HD+EDE+K+ L +HS + AI F +S P+G IR+
Sbjct: 433 VECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPIRV 492
Query: 119 INNL 122
+ NL
Sbjct: 493 MKNL 496
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YVILSN YAAA WKD ++R + K + K P SW + + HP + I
Sbjct: 417 YVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDI 476
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
N +K++F ++ G+VP LHDV+DEQK+ +L HS + AI FG ++TP G TIR+
Sbjct: 477 NAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRV 536
Query: 119 INNL 122
+ NL
Sbjct: 537 MKNL 540
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 97.4 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 50/123 (40%), Positives = 72/123 (58%), Gaps = 11/123 (8%)
Query: 11 VILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRIN 59
V+LSN YA R+W D + ++R++GM+K P SW E++ SHP I
Sbjct: 474 VLLSNTYADLRQWTDAEKPWKAMRDRGMRKEPGRSWIELEKRVHVFIAGDLSHPCSDTII 533
Query: 60 EALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLI 119
+ L L R++ GYVP T+ L D+ EQK++LL YHS + AIVFG + DG+ IR++
Sbjct: 534 QELNRLIGRIKSLGYVPQTEFVLQDLPTEQKEDLLKYHSEKMAIVFGTMHAVDGKPIRIM 593
Query: 120 NNL 122
NL
Sbjct: 594 KNL 596
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YVILSN YAAA WKD ++R + K + K P SW + + HP + I
Sbjct: 449 YVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDI 508
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
N +K++F ++ G+VP LHDV+DEQK+ +L HS + AI FG ++TP G TIR+
Sbjct: 509 NAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRV 568
Query: 119 INNL 122
+ NL
Sbjct: 569 MKNL 572
>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+ SN A + +W+D LR + + +KK PACSW ++K HP RI
Sbjct: 917 YVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRI 976
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L +L + ++ GYVP T ALHD+++EQK+ L HS R A+ FG I+TP+ T+R+
Sbjct: 977 SAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRI 1036
Query: 119 INNL 122
NL
Sbjct: 1037 FKNL 1040
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 74/124 (59%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTE-----------IKSHPYRLRI 58
YV+L+N Y++A W +R +++ +G++K P CSW E SHP ++
Sbjct: 637 YVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKL 696
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+ L+ERM +EGYVP T LH+VE+++K+ LL HS + AI FG ++T G IR+
Sbjct: 697 SGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRV 756
Query: 119 INNL 122
NL
Sbjct: 757 AKNL 760
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA A W++ A++R + K +KK SW E+K SHP RI
Sbjct: 604 YVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRI 663
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L++L R++ GY P TK LHDVE+E K+ +L HS R AI FG I+TP G I++
Sbjct: 664 YLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQI 723
Query: 119 INNL 122
+ NL
Sbjct: 724 VKNL 727
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 74/129 (57%), Gaps = 12/129 (9%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK------------SHP 53
N YV+L+N YA A +W++ RLR + +G++K P CSW EIK SHP
Sbjct: 634 NTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHP 693
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+ I LK + +M++EG+ P TK AL + ++ QK+ L HS + A+ FG ++ P
Sbjct: 694 HSKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPR 753
Query: 114 RTIRLINNL 122
+TIR+ NL
Sbjct: 754 KTIRVTKNL 762
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 70/128 (54%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPY 54
++ Y++LSN +A RRW +R +R + +KK P SW EI++ HP
Sbjct: 527 DVGTYILLSNMHARVRRWDHVVEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPE 586
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
I E +KDL ++ GYVP LHD+EDEQK + L YHS + A+ +G + TP G
Sbjct: 587 ANLIYENVKDLLSKIRPLGYVPDIDNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTPSGA 646
Query: 115 TIRLINNL 122
I +I NL
Sbjct: 647 PITVIKNL 654
>gi|218192399|gb|EEC74826.1| hypothetical protein OsI_10663 [Oryza sativa Indica Group]
Length = 703
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
I N YV L+N YA+ + + +R + +KG+ K PA SW E+ K
Sbjct: 467 IEPENPATYVTLANIYASVGLFDEVEDVRRIMESKGITKMPASSWIEVGRRVHVFLVGDK 526
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP I LK L+ +M +EGYV + LHDVEDEQK+ + YHS R A+ FG I++
Sbjct: 527 SHPKADEIYALLKKLYVKMVEEGYVADIEFVLHDVEDEQKEQDIGYHSERLAVAFGIIAS 586
Query: 111 PDGRTIRLINNL 122
P+G I++ NL
Sbjct: 587 PEGSPIKVFKNL 598
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 90 KKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
K+ + YHS R A+ FG I++P+G I++ NL
Sbjct: 628 KEQDIGYHSERLAVAFGIIASPEGSPIKVFKNL 660
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
+V++SN Y++ RW D A +R R+ G KK+P CSW EI +SHP I
Sbjct: 619 FVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSASI 678
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
N+ L++L +M++ GY + LHDVE+E+K+ +L YHS + AI FG ++T I +
Sbjct: 679 NKKLQELLVQMKKLGYRADSSFVLHDVEEEEKEQILLYHSEKVAIAFGILNTSPSSRILV 738
Query: 119 INNL 122
NL
Sbjct: 739 TKNL 742
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YVIL+N YA + +W+ ARLR + +KG+KK ACSW E+K SHP I
Sbjct: 465 YVILANMYAQSGKWEGVARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAI 524
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
LK L M + GYVP T HDVE+++K +++ HS R AI FG IST G + +
Sbjct: 525 YAELKRLEGLMREAGYVPDTGSVFHDVEEDEKTDMVCSHSERLAIAFGLISTLPGTRLLI 584
Query: 119 INNL 122
NL
Sbjct: 585 TKNL 588
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 74/124 (59%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTE-----------IKSHPYRLRI 58
YV+L+N Y++A W +R +++ +G++K P CSW E SHP ++
Sbjct: 724 YVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKL 783
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+ L+ERM +EGYVP T LH+VE+++K+ LL HS + AI FG ++T G IR+
Sbjct: 784 SGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRV 843
Query: 119 INNL 122
NL
Sbjct: 844 AKNL 847
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 74/124 (59%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTE-----------IKSHPYRLRI 58
YV+L+N Y++A W +R +++ +G++K P CSW E SHP ++
Sbjct: 724 YVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKL 783
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+ L+ERM +EGYVP T LH+VE+++K+ LL HS + AI FG ++T G IR+
Sbjct: 784 SGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRV 843
Query: 119 INNL 122
NL
Sbjct: 844 AKNL 847
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 74/129 (57%), Gaps = 12/129 (9%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK------------SHP 53
N YV+L+N YA A +W++ RLR + +G++K P CSW EIK SHP
Sbjct: 634 NSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHP 693
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+ I LK + +M++EG+ P TK AL + ++ QK+ L HS + A+ FG ++ P
Sbjct: 694 HSKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPR 753
Query: 114 RTIRLINNL 122
+TIR+ NL
Sbjct: 754 KTIRVTKNL 762
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+LSN YAAA A LR S+RN G++K P SW EIK HP I
Sbjct: 671 YVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVI 730
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
N L+ L + +EGY+P LHDV+ EQK +L HS R A+ +G + TP G IR+
Sbjct: 731 NAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRI 790
Query: 119 INNL 122
+ NL
Sbjct: 791 LKNL 794
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV L+N Y++ R D A+ R+ +R G+ KTP CSW E+ SHP +I
Sbjct: 402 YVYLANVYSSMGRLDDAAKCRLRMRENGVLKTPGCSWIEVDNTVHEFFMGDLSHPESNKI 461
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+++L +M+ GY P T +H +++E+K++ L HS + AI FG IST +G TIR+
Sbjct: 462 YSMIRELMWKMKLAGYKPKTDLVVHSIDEEEKEDALSIHSEKLAIAFGLISTSEGTTIRV 521
Query: 119 INNL 122
+ NL
Sbjct: 522 VKNL 525
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS---------- 51
I+ +N Y L+N Y+A RW D AR+ ++K +KK SWT ++S
Sbjct: 629 IDPDNSGAYSALANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDV 688
Query: 52 -HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
HP R I + +++E +++ G+VP LHDV+DE K+ LL HS + AI FG IST
Sbjct: 689 LHPQRDAICKKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLIST 748
Query: 111 PDGRTIRLINNL 122
P+ T+R++ NL
Sbjct: 749 PEKTTLRIMKNL 760
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+LSN YAAA A LR S+RN G++K P SW EIK HP I
Sbjct: 671 YVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVI 730
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
N L+ L + +EGY+P LHDV+ EQK +L HS R A+ +G + TP G IR+
Sbjct: 731 NAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRI 790
Query: 119 INNL 122
+ NL
Sbjct: 791 LKNL 794
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 74/132 (56%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS---------- 51
I+ +N Y L+N Y+A RW D AR+ ++KG+KK SWT ++
Sbjct: 813 IDPHNSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDV 872
Query: 52 -HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
HP R I +++E +++ G+VP LHDV+DE K+ LL HS + AI FG IST
Sbjct: 873 LHPQRDSIYRKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLIST 932
Query: 111 PDGRTIRLINNL 122
P+ T+R++ NL
Sbjct: 933 PEKTTLRIMKNL 944
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
Y+ LSN YAA +RW D R+R VR KG+KK+P CS+ E+ KSH I
Sbjct: 570 YICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDI 629
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L +L +++++ GY P T +DVE+E K+ +L HS R AI F I+T G IR+
Sbjct: 630 YAKLNELKQQLKEAGYKPDTSLVFYDVEEEVKEKMLWDHSERLAIAFALINTGPGTVIRI 689
Query: 119 INNL 122
NL
Sbjct: 690 TKNL 693
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+LSN YAAA A LR S+RN G++K P SW EIK HP I
Sbjct: 652 YVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVI 711
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
N L+ L + +EGY+P LHDV+ EQK +L HS R A+ +G + TP G IR+
Sbjct: 712 NAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRI 771
Query: 119 INNL 122
+ NL
Sbjct: 772 LKNL 775
>gi|302764608|ref|XP_002965725.1| hypothetical protein SELMODRAFT_84657 [Selaginella moellendorffii]
gi|300166539|gb|EFJ33145.1| hypothetical protein SELMODRAFT_84657 [Selaginella moellendorffii]
Length = 502
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y +L N YAA R+ D R+R S+ ++G+KK P S+ E+K +HP R I
Sbjct: 336 YTLLGNVYAATERYGDQMRVRKSMTDRGLKKVPRKSFIEVKNKVHEFVAGDRAHPSRDEI 395
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L RM + GYVP TK+ LH V +E+K+ L+ HS + AI FG I+TP G + +
Sbjct: 396 LLELEKLGGRMREAGYVPNTKDVLHAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLI 455
Query: 119 INNL 122
+ NL
Sbjct: 456 VKNL 459
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+LSN YA A+RW + A +R +++ KG+KK P SW E + SHP I
Sbjct: 445 HVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVI 504
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
N L+ L + ++ GY+P L DVEDE+K+ LL HS R A+ FG I TP G IR+
Sbjct: 505 NGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRI 564
Query: 119 INNL 122
+ NL
Sbjct: 565 MKNL 568
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV LSN YAAA R++D ++R + + + K P SW E+ KSHP I
Sbjct: 605 YVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEI 664
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L L E+++++GYVP T+ LHDV++EQK L HS R AI +G + TP G IR+
Sbjct: 665 YAELGKLTEQIKEQGYVPDTRFVLHDVDEEQKVQTLCSHSERLAITYGLMKTPPGTPIRI 724
Query: 119 INNL 122
+ NL
Sbjct: 725 VKNL 728
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 74/124 (59%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRL-----------RI 58
YV LSN YAA RW+D R+R ++N+G++K P S+ E++ + I
Sbjct: 511 YVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEI 570
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+++ +QEGY+P T LH++E+E+K++ L HS + A+ FG IST G TIR+
Sbjct: 571 SLKLEEITASAKQEGYMPETAWVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRI 630
Query: 119 INNL 122
+ NL
Sbjct: 631 VKNL 634
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 76/128 (59%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPY 54
N Y L+N Y+A +W++ A++R S+++ +KK SW E+K HP
Sbjct: 616 NSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQ 675
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+ I +K +++ +++ GYVP T LHD+E+E K+ +L +HS + AI FG ISTPD
Sbjct: 676 KNEIYITMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKT 735
Query: 115 TIRLINNL 122
T+R++ NL
Sbjct: 736 TLRIMKNL 743
>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
Length = 734
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV++SN YA +W DT +LR S++ + ++K P SW +K SHP I
Sbjct: 568 YVLMSNMYATNNKWLDTFKLRSSMKERRVRKQPGQSWIHLKNVVHRFVALDTSHPRSAEI 627
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L ER+++ GY T +HD+E+EQ++ L +HS + AI FG ISTP G +R+
Sbjct: 628 YAYLEKLMERLKEMGYTSRTDLVVHDIEEEQRETSLKFHSEKLAIAFGIISTPVGTALRI 687
Query: 119 INNL 122
NL
Sbjct: 688 FKNL 691
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
Y++LSN YA RW+D A +R +++ K + K SW E+++ HP +I
Sbjct: 673 YILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQI 732
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L +L +++ GYVP T LHDVEDEQK+ L HS + A+ F ISTP+ + IR+
Sbjct: 733 YEKLDELALKIKNVGYVPNTDFVLHDVEDEQKEQYLFQHSEKLAVAFALISTPNPKPIRV 792
Query: 119 INNL 122
NL
Sbjct: 793 FKNL 796
>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
Length = 613
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV L+N YA A +W D +R+R +++ + KTP SW EIK HP I
Sbjct: 447 YVQLANIYAVANQWDDVSRVRRWMKDNTVVKTPGYSWIEIKGVLHEFRSNDRLHPQLYLI 506
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+E L L ERM++ GYVP LHDV++ K +L HS + AI FG IST G T+R+
Sbjct: 507 HEKLGQLAERMKEMGYVPDLDFVLHDVDETMKVQMLMRHSEKLAIAFGLISTAHGMTLRI 566
Query: 119 INNL 122
NL
Sbjct: 567 FKNL 570
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 75/125 (60%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y++LSN +AA +W++ AR+R +R++G+KK ACSW E++ SHP +
Sbjct: 623 YMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAV 682
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVE-DEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
L+DL + M + GYVP T LHDVE D K+++L HS + A+ FG + P G TIR
Sbjct: 683 YIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIR 742
Query: 118 LINNL 122
+ NL
Sbjct: 743 IFKNL 747
>gi|298205169|emb|CBI17228.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 74/124 (59%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRL-----------RI 58
YV LSN YAA RW+D R+R ++N+G++K P S+ E++ + I
Sbjct: 424 YVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEI 483
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+++ +QEGY+P T LH++E+E+K++ L HS + A+ FG IST G TIR+
Sbjct: 484 SLKLEEITASAKQEGYMPETAWVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRI 543
Query: 119 INNL 122
+ NL
Sbjct: 544 VKNL 547
>gi|357111099|ref|XP_003557352.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 685
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA +W DT++LR S+R + + K P SW +K +HP I
Sbjct: 519 YVMLSNVYATHSKWLDTSKLRSSMRERRVWKQPGRSWIHLKNIMHTFVAGDTAHPRSAEI 578
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L ER++ GY T HDVE+EQ++ L +HS + AI FG ISTP G +R+
Sbjct: 579 YAYLEKLMERLKDLGYTSRTDLVAHDVEEEQRETALKFHSEKLAIAFGIISTPSGTPLRI 638
Query: 119 INNL 122
NL
Sbjct: 639 FKNL 642
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
+V+LSN Y+AA RW D A +R++ ++ G+KK P CSW EI +SH +I
Sbjct: 619 FVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQI 678
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
N L++L M++ GY DVE+E+K+ +L YHS + AI FG ++ GR I +
Sbjct: 679 NRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILV 738
Query: 119 INNL 122
NL
Sbjct: 739 TKNL 742
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+LSN YA A+RW + A +R +++ KG+KK P SW E + SHP I
Sbjct: 578 HVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVI 637
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
N L+ L + ++ GY+P L DVEDE+K+ LL HS R A+ FG I TP G IR+
Sbjct: 638 NGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRI 697
Query: 119 INNL 122
+ NL
Sbjct: 698 MKNL 701
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
+V+LSN Y+AA RW D A +R++ ++ G+KK P CSW EI +SH +I
Sbjct: 479 FVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQI 538
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
N L++L M++ GY DVE+E+K+ +L YHS + AI FG ++ GR I +
Sbjct: 539 NRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILV 598
Query: 119 INNL 122
NL
Sbjct: 599 TKNL 602
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+LSN YA A+RW + A +R +++ KG+KK P SW E + SHP I
Sbjct: 621 HVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVI 680
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
N L+ L + ++ GY+P L DVEDE+K+ LL HS R A+ FG I TP G IR+
Sbjct: 681 NGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRI 740
Query: 119 INNL 122
+ NL
Sbjct: 741 MKNL 744
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 72/128 (56%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPY 54
N YV+LSN YA A RW+D R+R+ ++N G+ K P S +IK HP
Sbjct: 565 NCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQ 624
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+I E L+ L ++++ GYVP LHDV E+K+ +L HS + A+ FG ++T G
Sbjct: 625 HEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGT 684
Query: 115 TIRLINNL 122
TI +I NL
Sbjct: 685 TIHIIKNL 692
>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 74/130 (56%), Gaps = 12/130 (9%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS------------H 52
+N+ Y++LS YA A +W D +R+R +R K ++K P CSW E K+ H
Sbjct: 444 DNLGNYLLLSKTYALAAKWDDVSRVRKLMREKQLRKNPGCSWVEAKNGIIHEFFAGDVKH 503
Query: 53 PYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPD 112
P I +AL DL +R++ GY P +D++DE K+ LL HS + A+ +G +ST
Sbjct: 504 PEINEIKKALDDLLQRLKCTGYQPKLNSVPYDIDDEGKRCLLVSHSEKLALAYGLLSTDA 563
Query: 113 GRTIRLINNL 122
G TI+++ NL
Sbjct: 564 GSTIKIMKNL 573
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 72/128 (56%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPY 54
N +V+LSN YA ++W+D LR +++ M K P SW +I+ SHP
Sbjct: 581 NSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYSWVDIRNKTHVFGVEDWSHPQ 640
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+ I E L +L +++++ GYVP T+ L D++D K+ LLHYHS R A+ F ++ P G
Sbjct: 641 KKEIYEKLDNLLDQIKRIGYVPQTESVLIDMDDNLKEKLLHYHSERIAVAFSLLTCPTGM 700
Query: 115 TIRLINNL 122
I + NL
Sbjct: 701 PIIVKKNL 708
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN Y++ W + A LR ++ +G+ K P CSW +I K H I
Sbjct: 755 YVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQIRNKVHSFVTGDKQHEKIEEI 814
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+DL+ + GYVP T+ LHD+++EQK++ L YHS + A+ +G + TP G I++
Sbjct: 815 DYTLQDLYTLLRGTGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQI 874
Query: 119 INNL 122
+ NL
Sbjct: 875 MKNL 878
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
+V+LSN Y+AA RW D A +R++ ++ G+KK P CSW EI +SH +I
Sbjct: 619 FVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQI 678
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
N L++L M++ GY DVE+E+K+ +L YHS + AI FG ++ GR I +
Sbjct: 679 NRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILV 738
Query: 119 INNL 122
NL
Sbjct: 739 TKNL 742
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS---------- 51
I N YV+LSN YA+A RW + A+ R + +KGMKK P CS EI S
Sbjct: 567 IEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDK 626
Query: 52 -HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
HP I L+++ +E+ G+VP T E L ++E+E K+ L +HS + AI FG IST
Sbjct: 627 FHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIST 686
Query: 111 PDGRTIRLINNL 122
G + ++ NL
Sbjct: 687 KPGTKLTIVKNL 698
>gi|414876780|tpg|DAA53911.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 491
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRL-----------RI 58
YVILSN YA A W+ AR++ +R++G++K SW EIK Y I
Sbjct: 325 YVILSNIYAKAGNWEGAARVKKIMRDRGVRKESGNSWVEIKQKIYMFSSNDHTNPMIDEI 384
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L+ L+E M+++GY P T ALH V+++QK L YHS R AI F I+TP G I +
Sbjct: 385 KEELERLYEEMDKQGYEPDTSCALHMVDNKQKLESLKYHSERLAIAFALINTPPGTPITV 444
Query: 119 INNL 122
+ NL
Sbjct: 445 MKNL 448
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 73/128 (57%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPY 54
N YV+L+N YA A +W++ +LR + +G+KK P CSW EIK S P
Sbjct: 756 NTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQ 815
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+I LK L +M++EGY P T AL + ++ +K+ L HS + A+ FG ++ P G+
Sbjct: 816 AKKIELLLKRLRSKMKEEGYSPKTAYALLNADEREKEVALCGHSEKLAMAFGMLNLPPGK 875
Query: 115 TIRLINNL 122
TIR+ NL
Sbjct: 876 TIRVTKNL 883
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 75/129 (58%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHP 53
N V+LSN Y+ WK+ A+LR ++ ++ +KK P S ++K SHP
Sbjct: 765 GNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHP 824
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
I + +++L M + GYVP TK LHDV++EQK++LL YHS + AI FG ISTP+
Sbjct: 825 RAAEIYDKVEELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPET 884
Query: 114 RTIRLINNL 122
++ + NL
Sbjct: 885 SSLHIFKNL 893
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRLRINE--------- 60
YV+LSN YAAA +W + R ++ +KK P SW E+K+ + +++
Sbjct: 824 YVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELI 883
Query: 61 --ALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+KD+ ++QEGYVP T L DVE+E+K+ L+YHS + A+ FG +STP IR+
Sbjct: 884 YRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRV 943
Query: 119 INNL 122
I NL
Sbjct: 944 IKNL 947
>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Brachypodium distachyon]
Length = 647
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/124 (37%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTE-----------IKSHPYRLRI 58
YV+LSN A ++RW D +R +R K ++K P SW E KSHP + I
Sbjct: 481 YVLLSNIRATSKRWGDVTEVRKIMREKDIRKEPGVSWVEHKGQVHQFCTGDKSHPRQGEI 540
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+E LK++ ++ Q GY P HD+EDE+K+ L +HS + AI F ++ P+G IR+
Sbjct: 541 DEYLKEMMGKIRQCGYAPDMTMVFHDMEDEEKEVSLTHHSEKLAIAFAFLNLPEGVPIRV 600
Query: 119 INNL 122
+ NL
Sbjct: 601 MKNL 604
>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
Length = 916
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/125 (44%), Positives = 72/125 (57%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKK-TPACSWTEIK-----------SHPYRLR 57
YV+LSN YAAA RW+D+ R+R + + +KK P S +K SHP
Sbjct: 748 YVVLSNIYAAAGRWEDSIRVREDMAERRVKKRAPGKSSIVVKNRVHEFFARDRSHPQSDE 807
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I L+ L + + GYVP T+ LHDVE+EQK+ LL YHS + AI FG IS P +IR
Sbjct: 808 IYAELERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIR 867
Query: 118 LINNL 122
+I NL
Sbjct: 868 VIKNL 872
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 77/132 (58%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
++ N V+LSN Y+ WK+ A+LR ++ ++ +KK P S ++K
Sbjct: 513 LDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDT 572
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP I + +++L M + GYVP TK LHDV++EQK++LL YHS + AI FG IST
Sbjct: 573 SHPRAAEIYDKVEELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLIST 632
Query: 111 PDGRTIRLINNL 122
P+ ++ + NL
Sbjct: 633 PEKSSLHIFKNL 644
>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
Length = 562
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y +L N YAA R+ D R+R + ++G+KK P S+ E+K +HP R I
Sbjct: 396 YTLLGNVYAATGRYGDQMRVRKGMTDRGLKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEI 455
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L RM + GYVP TK+ LH V +E+K+ L+ HS + AI FG I+TP G + +
Sbjct: 456 LLELEKLGGRMREAGYVPNTKDVLHAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLI 515
Query: 119 INNL 122
+ NL
Sbjct: 516 VKNL 519
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 70/129 (54%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHP 53
N YV+L + +AA +W + A LR +R++ +KK P CSW + K SHP
Sbjct: 580 QNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHP 639
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+ RI E L+ L +M +EGY P LHDV D K +++ +HS + AI FG I P
Sbjct: 640 FSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQE 699
Query: 114 RTIRLINNL 122
IR++ NL
Sbjct: 700 MPIRIVKNL 708
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 74/132 (56%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
I N YVILSN YA+A RW D +R ++ K + K P SW E+ +
Sbjct: 412 IESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDR 471
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP + + +++L ++++ GYVP L+DV+DEQK+ +L HS + A+ FG I T
Sbjct: 472 SHPRKEEVFAKVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICT 531
Query: 111 PDGRTIRLINNL 122
P G +R+I NL
Sbjct: 532 PGGTPVRIIKNL 543
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 70/129 (54%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHP 53
N YV+L + +AA +W + A LR +R++ +KK P CSW + K SHP
Sbjct: 580 QNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHP 639
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+ RI E L+ L +M +EGY P LHDV D K +++ +HS + AI FG I P
Sbjct: 640 FSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQE 699
Query: 114 RTIRLINNL 122
IR++ NL
Sbjct: 700 MPIRIVKNL 708
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 72/128 (56%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPY 54
N YV+LSN YA A RW+D R+R+ ++N G+ K P S +IK HP
Sbjct: 411 NCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQ 470
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+I E L+ L ++++ GYVP LHDV E+K+ +L HS + A+ FG ++T G
Sbjct: 471 HEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGT 530
Query: 115 TIRLINNL 122
TI +I NL
Sbjct: 531 TIHIIKNL 538
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 70/129 (54%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHP 53
N YV+L + +AA +W + A LR +R++ +KK P CSW + K SHP
Sbjct: 580 QNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHP 639
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+ RI E L+ L +M +EGY P LHDV D K +++ +HS + AI FG I P
Sbjct: 640 FSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQE 699
Query: 114 RTIRLINNL 122
IR++ NL
Sbjct: 700 MPIRIVKNL 708
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 72/123 (58%), Gaps = 11/123 (8%)
Query: 11 VILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRIN 59
V++SN YAAA RW D A +R +++ GMKK P S E+ +SHP RIN
Sbjct: 566 VLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRIN 625
Query: 60 EALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLI 119
E L ++ ++ + GYVP T L ++++E+K+ L YHS + A+ FG IST IR++
Sbjct: 626 EMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIV 685
Query: 120 NNL 122
NL
Sbjct: 686 KNL 688
>gi|358357208|gb|AEU08444.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 72/116 (62%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRINEALKDLF 66
AAA W DTA++R ++++G++K P S E+ KSHP I+ L+ L
Sbjct: 1 AAAGMWDDTAKVRKMMQDRGVRKEPGHSCIEVDNQVHKFVVADKSHPKIEEIHAELRRLS 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
E M+++GY+P T+ LHDVE+EQK++ L YHS + AI FG I+TP G I +I NL
Sbjct: 61 ECMKEDGYLPDTRCVLHDVEEEQKESSLCYHSEKLAIAFGLITTPPGTPIHVIKNL 116
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 77/133 (57%), Gaps = 11/133 (8%)
Query: 1 MINLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS--------- 51
+I NN Y L+N Y++ +W D A++R ++ +G+KK SW +I++
Sbjct: 572 LIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVED 631
Query: 52 --HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIS 109
HP + I + + +++ +++ G+ P T+ LHD+E E K +L YHS + AI FG IS
Sbjct: 632 GLHPQKDEIYKMMDKIWKEIKKMGFAPDTESVLHDLEVEVKDQILRYHSEKLAIAFGIIS 691
Query: 110 TPDGRTIRLINNL 122
TP+ T+R++ NL
Sbjct: 692 TPENTTLRIMKNL 704
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+++L+N YA+ W + A++R S++N +KK P SW E+K SHP I
Sbjct: 697 HILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEI 756
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L DL ER+ GYVP + LHDVE +K+ LL +HS + A+ FG I+TP G IR+
Sbjct: 757 YVKLDDLRERLTSAGYVPMIETDLHDVEQIEKEQLLWHHSEKLAVAFGLIATPPGAPIRV 816
Query: 119 INNL 122
NL
Sbjct: 817 KKNL 820
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 72/124 (58%), Gaps = 12/124 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y++LSN YA+ +W D A+ RV++R +KK CSW +K SHP + I
Sbjct: 902 YILLSNMYASGGKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLI 961
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E LK+L +M GY+P T+ AL+D+E E K+ LL YHS + A+ F ++ P IR+
Sbjct: 962 YEKLKELNGKMRLAGYIPETRFALYDLEGESKEELLSYHSEKIAVAF-VLTRPSKMPIRI 1020
Query: 119 INNL 122
+ NL
Sbjct: 1021 LKNL 1024
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 74/132 (56%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
I N YVILSN YA+A RW D +R ++ K + K P SW E+ +
Sbjct: 879 IESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDR 938
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP + + +++L ++++ GYVP L+DV+DEQK+ +L HS + A+ FG I T
Sbjct: 939 SHPRKEEVFAKVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICT 998
Query: 111 PDGRTIRLINNL 122
P G +R+I NL
Sbjct: 999 PGGTPVRIIKNL 1010
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV LSN YA+ W + + +R+ ++ ++K P CSW +I SHP I
Sbjct: 474 YVALSNMYASQGNWSEVSEMRLRMKEMDIRKDPGCSWIDIDGVLHEFLVEDDSHPRAKEI 533
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
N L ++ +++ GY P T + L ++E+E K+N LHYHS + A FG IST G+ IR+
Sbjct: 534 NSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENALHYHSEKMATAFGLISTSPGKPIRI 593
Query: 119 INNL 122
+ NL
Sbjct: 594 VKNL 597
>gi|361068225|gb|AEW08424.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
gi|383165794|gb|AFG65801.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
gi|383165798|gb|AFG65803.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
gi|383165808|gb|AFG65808.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
gi|383165812|gb|AFG65810.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
gi|383165814|gb|AFG65811.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
Length = 156
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 65/112 (58%), Gaps = 11/112 (9%)
Query: 22 RWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRINEALKDLFERME 70
RW D A +R +++KG+KK P CSW E+ SHP I L L +M+
Sbjct: 2 RWNDAANVRRMMKDKGLKKQPGCSWIEVNNKMHSFVVGDTSHPQTEEIYTLLDALAGQMK 61
Query: 71 QEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
+ GY+P T LHDVE+EQKK+LL +HS + AI FG ISTP +I + NL
Sbjct: 62 EAGYLPDTDFVLHDVEEEQKKDLLCHHSEKLAIAFGLISTPPWTSITVTKNL 113
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA RW D LR ++ G++K P S E++ SHP +I
Sbjct: 432 YVLLSNLYAGVGRWADVHVLRKTMVTHGVRKNPGHSLVELRNSVYEFVMGDRSHPETDQI 491
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L D+ ER+ ++GY+P T L D+EDE+K++ L+YHS R AI F + + G IR+
Sbjct: 492 YEMLGDIAERLRRQGYIPHTSNVLADIEDEEKESALNYHSERLAIAFALLKSLPGTPIRI 551
Query: 119 INNL 122
+ NL
Sbjct: 552 VKNL 555
>gi|224119910|ref|XP_002318193.1| predicted protein [Populus trichocarpa]
gi|222858866|gb|EEE96413.1| predicted protein [Populus trichocarpa]
Length = 533
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 74/129 (57%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHP 53
N+ YV++SN YAA+ +WK+ +LR ++NKG+KK A S E + +P
Sbjct: 362 NHTGYYVLMSNIYAASNKWKEVWKLRQDMKNKGLKKPAAFSMIEYGKDILGFHTADQENP 421
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
YR + + ++ L M+ GYVP ALHDVE+E K+ +L+YHS + A+ FG + G
Sbjct: 422 YRHEVYKKMESLAIEMKMAGYVPDLSCALHDVEEEDKERMLNYHSEKLAVAFGVLKIDPG 481
Query: 114 RTIRLINNL 122
IR+ NL
Sbjct: 482 MVIRVTKNL 490
>gi|383165804|gb|AFG65806.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
gi|383165806|gb|AFG65807.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
Length = 156
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 65/112 (58%), Gaps = 11/112 (9%)
Query: 22 RWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRINEALKDLFERME 70
RW D A +R +++KG+KK P CSW E+ SHP I L L +M+
Sbjct: 2 RWNDAANVRRMMKDKGLKKQPGCSWIEVNNKMHSFVVGDTSHPQTEEIYTLLDALAGQMK 61
Query: 71 QEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
+ GY+P T LHDVE+EQKK+LL +HS + AI FG ISTP +I + NL
Sbjct: 62 EAGYLPDTDFVLHDVEEEQKKDLLCHHSEKLAIAFGLISTPPWTSITVTKNL 113
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 72/123 (58%), Gaps = 11/123 (8%)
Query: 11 VILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRIN 59
V++SN YAAA RW D A +R +++ GMKK P S E+ +SHP RIN
Sbjct: 480 VLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRIN 539
Query: 60 EALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLI 119
E L ++ ++ + GYVP T L ++++E+K+ L YHS + A+ FG IST IR++
Sbjct: 540 EMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIV 599
Query: 120 NNL 122
NL
Sbjct: 600 KNL 602
>gi|302781368|ref|XP_002972458.1| hypothetical protein SELMODRAFT_97859 [Selaginella moellendorffii]
gi|300159925|gb|EFJ26544.1| hypothetical protein SELMODRAFT_97859 [Selaginella moellendorffii]
Length = 381
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 74/124 (59%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y+++SN YAA RW D ++R + +G+KK P S E+K SHP + I
Sbjct: 215 YLLMSNLYAALERWDDVEKVRRLMERRGVKKEPGLSCIEVKNRLHEFGAADKSHPQKDLI 274
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L+ L +++ GYVP T LH+V++E K+ L +HS R A+V+G I+TP G ++ +
Sbjct: 275 YEELRKLTLEIKEAGYVPDTSLVLHNVDEETKQATLFHHSERLAVVYGLINTPPGTSLCV 334
Query: 119 INNL 122
+NNL
Sbjct: 335 VNNL 338
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 72/123 (58%), Gaps = 11/123 (8%)
Query: 11 VILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRIN 59
V++SN YAAA RW D A +R +++ GMKK P S E+ +SHP RIN
Sbjct: 606 VLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRIN 665
Query: 60 EALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLI 119
E L ++ ++ + GYVP T L ++++E+K+ L YHS + A+ FG IST IR++
Sbjct: 666 EMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIV 725
Query: 120 NNL 122
NL
Sbjct: 726 KNL 728
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 73/125 (58%), Gaps = 11/125 (8%)
Query: 9 VYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLR 57
VYV LS+ YAAA W++ A++R + ++G++K C+W E+ +SHP
Sbjct: 670 VYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGE 729
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I L L +++EGY+P T+ LH+V +++K+ + YHS + AI +G +S P G IR
Sbjct: 730 IYAELARLMTAIKREGYIPVTQNVLHNVGEQEKEEAISYHSEKLAIAYGVLSLPSGAPIR 789
Query: 118 LINNL 122
+ NL
Sbjct: 790 IFKNL 794
>gi|383165800|gb|AFG65804.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
gi|383165802|gb|AFG65805.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
gi|383165820|gb|AFG65814.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
Length = 156
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 65/112 (58%), Gaps = 11/112 (9%)
Query: 22 RWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRINEALKDLFERME 70
RW D A +R +++KG+KK P CSW E+ SHP I L L +M+
Sbjct: 2 RWNDAANVRRMMKDKGLKKQPGCSWIEVNNKMHSFVVGDTSHPQTEEIYTLLDALAGQMK 61
Query: 71 QEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
+ GY+P T LHDVE+EQKK+LL +HS + AI FG ISTP +I + NL
Sbjct: 62 EAGYLPDTDFVLHDVEEEQKKDLLCHHSEKLAIAFGLISTPPWTSITVTKNL 113
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 71/129 (55%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HP 53
+++ Y +LSN YA ARRW +R +R + +KK P SW +I++ HP
Sbjct: 523 HDVGTYTLLSNMYAKARRWDGVVTIRKLMRERNIKKEPGASWLDIRNDIHVFLSEGSNHP 582
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
++I + ++ L ++ GYVP LHDVEDEQK+ L YHS + A+ +G + P
Sbjct: 583 ESIQIYKKVQQLLALIKPLGYVPNIASVLHDVEDEQKEGYLSYHSEKLALAYGLMKIPSP 642
Query: 114 RTIRLINNL 122
IR+I NL
Sbjct: 643 APIRIIKNL 651
>gi|302805077|ref|XP_002984290.1| hypothetical protein SELMODRAFT_119978 [Selaginella moellendorffii]
gi|300148139|gb|EFJ14800.1| hypothetical protein SELMODRAFT_119978 [Selaginella moellendorffii]
Length = 448
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 74/124 (59%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y+++SN YAA RW D ++R + +G+KK P S E+K SHP + I
Sbjct: 282 YLLMSNLYAALERWDDVKKVRRLMERRGVKKEPGLSCIEVKNRLHEFGAANKSHPQKDLI 341
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L+ L +++ GYVP T LH+V++E K+ L +HS R A+V+G I+TP G ++ +
Sbjct: 342 YEELRKLTLEIKEAGYVPDTSLVLHNVDEETKQATLFHHSERLAVVYGLINTPPGTSLCV 401
Query: 119 INNL 122
+NNL
Sbjct: 402 VNNL 405
>gi|383165792|gb|AFG65800.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
gi|383165796|gb|AFG65802.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
Length = 156
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 65/112 (58%), Gaps = 11/112 (9%)
Query: 22 RWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRINEALKDLFERME 70
RW D A +R +++KG+KK P CSW E+ SHP I L L +M+
Sbjct: 2 RWNDAANVRRMMKDKGLKKQPGCSWIEVNNKMHSFVVGDTSHPQTEEIYTLLDALAGQMK 61
Query: 71 QEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
+ GY+P T LHDVE+EQKK+LL +HS + AI FG ISTP +I + NL
Sbjct: 62 EAGYLPDTDFVLHDVEEEQKKDLLCHHSEKLAIAFGLISTPPWTSITVTKNL 113
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
++ N YV+L + +A+ W D A+LR +R++ +KK P CSW + K
Sbjct: 576 LDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQ 635
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP+ I E L+ L +M +EGY P LHDV D +K ++L +HS + AI FG I
Sbjct: 636 SHPFSRTIYEKLQWLNSKMVEEGYKPDVSSVLHDVADAEKVHMLSHHSEKLAIAFGLIFV 695
Query: 111 PDGRTIRLINNL 122
P IR++ NL
Sbjct: 696 PPEMPIRIVKNL 707
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 76/124 (61%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN +A+AR W + +++R ++R++ ++K P SW E+K SHP I
Sbjct: 501 YVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLELKNLVHQFSMGDKSHPQYFEI 560
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ LK+L ++Q GYVP LHD+++E+K+ L +HS +FAI F ++T + IR+
Sbjct: 561 DLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHSEKFAIAFALMNTSENVPIRV 620
Query: 119 INNL 122
+ NL
Sbjct: 621 MKNL 624
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV L+N YAA RW A +R S+++ + K P SW EI S HP I
Sbjct: 469 YVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDRLHPELASI 528
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+E LKDL ++M+ GYVP + LHDV +E K+ LL +HS + AI FG + P G IR+
Sbjct: 529 HEKLKDLEKKMKLAGYVPDLEFVLHDVGEELKEQLLLWHSEKLAIAFGLLKVPLGVPIRV 588
Query: 119 INNL 122
NL
Sbjct: 589 FKNL 592
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 73/133 (54%), Gaps = 12/133 (9%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTE------------I 49
I N Y++LSN YA+ RW D A LR ++ + ++K+P CSWTE I
Sbjct: 530 IEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGI 589
Query: 50 KSHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIS 109
SHP + I + L +L + + GY P ALHDV++E+K N L YHS R A+ + +
Sbjct: 590 NSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLK 649
Query: 110 TPDGRTIRLINNL 122
+G IR++ NL
Sbjct: 650 LSEGIPIRVMKNL 662
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 79/124 (63%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+ +L+N YA+A RW+D A++R +++ G+KK PACSW E++ +HP + +I
Sbjct: 481 HTLLANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKI 540
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
++ + L +++++ GYVP T L V+ ++K+ L YHS + A+ F ++TP G TIR+
Sbjct: 541 HKMWEKLNQKIKEIGYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNTPPGSTIRI 600
Query: 119 INNL 122
+ N+
Sbjct: 601 MKNI 604
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA A RW+D +R ++ KG+KK P S E+ +SHP +I
Sbjct: 1501 YVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQI 1560
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L L +M++ GYVP T ALHDVE+E K+ L HS + AI F ++T G IR+
Sbjct: 1561 YEELDVLVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRI 1620
Query: 119 INNL 122
NL
Sbjct: 1621 TKNL 1624
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV LS+ YAAA R++D ++R + + + K P SW E+ KSHP +I
Sbjct: 557 YVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQI 616
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L L E++++ GYVP T+ LHDV++EQK+ +L HS R AI +G + TP G IR+
Sbjct: 617 YVELGKLTEQIKEMGYVPDTRFVLHDVDEEQKERILFSHSERLAITYGLMKTPPGMPIRI 676
Query: 119 INNL 122
+ NL
Sbjct: 677 VKNL 680
>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
Length = 920
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 55/125 (44%), Positives = 72/125 (57%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKK-TPACSWTEIK-----------SHPYRLR 57
YV+LSN YAAA RW+D+ R+R + + +KK P S +K SHP
Sbjct: 752 YVVLSNIYAAAGRWEDSIRVREDMAERRVKKRVPGKSSIVVKNRVHEFFARDRSHPQSDA 811
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I L+ L + + GYVP T+ LHDVE+EQK+ LL YHS + AI FG IS P +IR
Sbjct: 812 IYAELERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIR 871
Query: 118 LINNL 122
+I NL
Sbjct: 872 VIKNL 876
>gi|302141658|emb|CBI18837.3| unnamed protein product [Vitis vinifera]
Length = 1589
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 80/134 (59%), Gaps = 18/134 (13%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHP 53
+N YV+LSN YA+A RW++ A +R +R++G+KK P CSW E+K SHP
Sbjct: 171 SNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHP 230
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDE-----QKKNLLHYHSGRFAIVFGAI 108
I E L+++ +M++ GYVP + AL V+D+ +K+ L +HS + A+ FG I
Sbjct: 231 MIKEIYEFLEEMSGKMKRAGYVPDVRWAL--VKDDGTRGGEKEIRLGHHSEKLAVAFGLI 288
Query: 109 STPDGRTIRLINNL 122
ST DG I ++ NL
Sbjct: 289 STKDGEPILVVKNL 302
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 73/125 (58%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA +W +LR ++NKG++KTP CSW E+ +SH +I
Sbjct: 318 YVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQI 377
Query: 59 NEALKDLFERMEQEG-YVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
++++ R+ +G +VP T L D+E+E+K++ L HS + AI G ISTP G IR
Sbjct: 378 YAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIR 437
Query: 118 LINNL 122
++ NL
Sbjct: 438 IVKNL 442
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 70/129 (54%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHP 53
+N VYV+L N YAA +RW D LR + +KG+KK P CS E+ +SHP
Sbjct: 573 DNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHP 632
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
I+ L + + ++ GY P E D+ +E K+N + HS + AI FG I++P G
Sbjct: 633 QTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPG 692
Query: 114 RTIRLINNL 122
TIR+ NL
Sbjct: 693 VTIRITKNL 701
>gi|359497341|ref|XP_003635488.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 358
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 80/134 (59%), Gaps = 18/134 (13%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHP 53
+N YV+LSN YA+A RW++ A +R +R++G+KK P CSW E+K SHP
Sbjct: 184 SNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHP 243
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDE-----QKKNLLHYHSGRFAIVFGAI 108
I E L+++ +M++ GYVP + AL V+D+ +K+ L +HS + A+ FG I
Sbjct: 244 MIKEIYEFLEEMSGKMKRAGYVPDVRWAL--VKDDGTRGGEKEIRLGHHSEKLAVAFGLI 301
Query: 109 STPDGRTIRLINNL 122
ST DG I ++ NL
Sbjct: 302 STKDGEPILVVKNL 315
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 73/125 (58%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA +W +LR ++NKG++KTP CSW E+ +SH +I
Sbjct: 520 YVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQI 579
Query: 59 NEALKDLFERMEQEG-YVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
++++ R+ +G +VP T L D+E+E+K++ L HS + AI G ISTP G IR
Sbjct: 580 YAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIR 639
Query: 118 LINNL 122
++ NL
Sbjct: 640 IVKNL 644
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 12/130 (9%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK------------SH 52
NN Y++LSN Y++ RWKD LR ++R K ++K+P CSW E+ SH
Sbjct: 398 NNAGPYILLSNLYSSQSRWKDVVELRKTMRAKNLRKSPGCSWIEVDKKVHIFSGGGSTSH 457
Query: 53 PYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPD 112
P I + L L + + GY P +HDV++E+K + L HS + A+ +G + P+
Sbjct: 458 PEHEMILKKLGKLGALLREAGYCPDGSFVMHDVDEEEKVHSLRDHSEKLAVAYGLLKVPE 517
Query: 113 GRTIRLINNL 122
G IR++ NL
Sbjct: 518 GMPIRVMKNL 527
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 76/132 (57%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
++ +N YV+LSN YA AR WKD R+R+ V+ + ++K P S E+K
Sbjct: 499 LDASNSGYYVLLSNIYAEARMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDK 558
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP + I L+ L ERM++ GYVP T LHD+++E+K++ L HS + A+ F +++
Sbjct: 559 SHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNS 618
Query: 111 PDGRTIRLINNL 122
I +I NL
Sbjct: 619 VPRSVIHIIKNL 630
>gi|358357244|gb|AEU08462.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 69/116 (59%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRINEALKDLF 66
AAA RW DTA++R + +G++K P S E+ HP I+ L+ L
Sbjct: 1 AAAGRWDDTAKVRKMMLARGVRKEPGHSCIEVHGQVHTFVVEDILHPQMEEIHGELRRLA 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
ERM++ GYVP T+ LHDVE+EQK+ L YHS + A+ FG ISTP G +R+I NL
Sbjct: 61 ERMKETGYVPDTRFVLHDVEEEQKEFSLCYHSEKLAMAFGLISTPAGTPMRIIKNL 116
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 74/129 (57%), Gaps = 12/129 (9%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK------------SHP 53
N YV+L+N YA A + ++ R+R + KG++K P CSW EIK SHP
Sbjct: 634 NTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHP 693
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+ +I LK + +M++EGY P TK AL + ++ QK+ L HS + A+ FG ++ P
Sbjct: 694 HSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPR 753
Query: 114 RTIRLINNL 122
+TIR+ NL
Sbjct: 754 KTIRVTKNL 762
>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 47/132 (35%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
I N +V+LSN YA + WK +++R +++KG+KK P CS E+ K
Sbjct: 454 IESKNDAAHVLLSNIYAESHNWKGVSKVRNMMKSKGVKKMPGCSAIEVDGKVHEFFVGSK 513
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP I L ++ R+ +GY TKE L D+E+E+K+ + HS + A+ FG I+
Sbjct: 514 SHPRYKDIQTMLAEMSHRLRLQGYAANTKEVLFDIEEEEKEGAISLHSEKLALAFGLITL 573
Query: 111 PDGRTIRLINNL 122
P+ IR++ NL
Sbjct: 574 PEDTVIRIVKNL 585
>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 654
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 74/124 (59%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRL--------RINEA 61
YV+LS+ YA +R W D R+R + ++G++K P+CSW E+K Y L +I E
Sbjct: 488 YVLLSHIYAKSRMWNDVRRVRKQLESRGLQKIPSCSWIEVKRKIYSLVSIEEYNPQIEEL 547
Query: 62 ---LKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L L ++ +GYVP T +D+++E+K+ ++ HSG+ A+ FG I+T G IR+
Sbjct: 548 CAFLITLLTEIKNQGYVPQTNVVTYDLDEEEKERIVLGHSGKLAVAFGLINTSKGEIIRI 607
Query: 119 INNL 122
NNL
Sbjct: 608 SNNL 611
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK------------SHPYRLR 57
Y++LSN YA+ RWKD A LR ++R + + K+P CSW E+ SHP
Sbjct: 536 YILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKVHMFTGGGSASHPEHEM 595
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I + L+ L + + GY P +HDV++E K + L +HS + A+ +G + P G+ IR
Sbjct: 596 IMKKLEKLGASLREAGYCPDGSFVMHDVDEEDKVHSLRHHSEKMAVAYGLLKVPVGKPIR 655
Query: 118 LINNL 122
++ NL
Sbjct: 656 VMKNL 660
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV L+N YA A +W D +R+R +++ + KTP SW EIK HP I
Sbjct: 447 YVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLI 506
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+E L L ERM+ GYVP LHDV++ K +L HS + AI FG IST G T+R+
Sbjct: 507 HEKLGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTAPGMTLRI 566
Query: 119 INNL 122
NL
Sbjct: 567 FKNL 570
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
I+ +N YV LSN YAAAR W A +RV ++ KG+ K CSW E+ K
Sbjct: 520 IDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDK 579
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP I ++ + R+++ G+V +LHD+ DE+ + L HS R I +G IST
Sbjct: 580 SHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERITIAYGLIST 639
Query: 111 PDGRTIRLINNL 122
P G T+R+ NL
Sbjct: 640 PQGTTLRITKNL 651
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN +A+ +RW D + +R ++R++ +KK P SW E+K SHP + I
Sbjct: 491 YVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEPGISWLEVKNQIHQFCMGDKSHPKSVEI 550
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L++L M++ GYVP LHD++ E K+ L +HS + AI F + TP G IR+
Sbjct: 551 ASYLRELTSEMKKRGYVPDIDSVLHDMDVEDKEYSLVHHSEKLAIAFALLYTPVGTPIRV 610
Query: 119 INNL 122
I NL
Sbjct: 611 IKNL 614
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRL-----------RI 58
YV+LSN YA A RW+D +R + +KG+KK P S EI H Y I
Sbjct: 511 YVLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEI 570
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+AL L RM++ GY+P T ALHDVE+E K+ L HS + AIVF ++T G TIR+
Sbjct: 571 YKALGVLVGRMKELGYMPETDSALHDVEEEDKECHLAVHSEKLAIVFAILNTKPGSTIRI 630
Query: 119 INNL 122
N+
Sbjct: 631 TKNI 634
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 48/124 (38%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+L+N YA+A +W++ A +R +R+ +KK P SW E+K SH I
Sbjct: 767 HVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEI 826
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L +L + M++ GYVP + LHDVE +K+ LL++HS + A+ FG I+TP G IR+
Sbjct: 827 YAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRV 886
Query: 119 INNL 122
NL
Sbjct: 887 KKNL 890
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 48/124 (38%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+L+N YA+A +W++ A +R +R+ +KK P SW E+K SH I
Sbjct: 740 HVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEI 799
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L +L + M++ GYVP + LHDVE +K+ LL++HS + A+ FG I+TP G IR+
Sbjct: 800 YAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRV 859
Query: 119 INNL 122
NL
Sbjct: 860 KKNL 863
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV L+N YAA RW A +R S+++ + KTP SW E+KS HP I
Sbjct: 433 YVQLANVYAAMNRWDHVAMVRRSMKDNKVIKTPGYSWIEVKSVVHEFRSGDRIHPELAFI 492
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+E L +L +M GYVP + ALHDV +EQKK +L HS + AI +G I P G IR+
Sbjct: 493 HEKLNELERKMRLAGYVPDLEYALHDVGEEQKKQILLRHSEKLAIAYGLIRMPLGTPIRV 552
Query: 119 INNL 122
NL
Sbjct: 553 FKNL 556
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 73/125 (58%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA +W +LR ++NKG++KTP CSW E+ +SH +I
Sbjct: 422 YVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQI 481
Query: 59 NEALKDLFERMEQEG-YVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
++++ R+ +G +VP T L D+E+E+K++ L HS + AI G ISTP G IR
Sbjct: 482 YAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIR 541
Query: 118 LINNL 122
++ NL
Sbjct: 542 IVKNL 546
>gi|383165810|gb|AFG65809.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
Length = 156
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 65/112 (58%), Gaps = 11/112 (9%)
Query: 22 RWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRINEALKDLFERME 70
RW D A +R +++KG+KK P CSW E+ SHP I L L +M+
Sbjct: 2 RWNDAANVRRMMKDKGLKKQPGCSWIEVNNKMHSFVVGDTSHPQTEEIYTLLDALAGQMK 61
Query: 71 QEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
+ GY+P T LHDVE+EQKK+LL +HS + AI FG ISTP +I + NL
Sbjct: 62 EAGYLPDTDFVLHDVEEEQKKDLLCHHSEKLAISFGLISTPPWTSITVTKNL 113
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 73/125 (58%), Gaps = 11/125 (8%)
Query: 9 VYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRL-----------R 57
++V+LSNAYAAA R++D A+ R +R++G+KK SW E + ++
Sbjct: 460 LHVMLSNAYAAAGRYEDAAKARKMLRDRGVKKETGLSWIEEGNRVHKFAAGDRFHVRMKE 519
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I + L+DL E ME+ GYV T L +V E+K + YHS R AI FG IS P GR IR
Sbjct: 520 IYQKLEDLGEEMERAGYVADTSFVLREVGSEEKNQTIRYHSERLAIAFGLISIPLGRPIR 579
Query: 118 LINNL 122
++ NL
Sbjct: 580 IMKNL 584
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS---------- 51
I+ NN Y ++N Y+A RW D AR+ + + K ++K SWT I+S
Sbjct: 524 IDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDV 583
Query: 52 -HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
HP R + ++E ++ G+VP + LHDV+DE K+ LL HS + AI FG IST
Sbjct: 584 VHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLIST 643
Query: 111 PDGRTIRLINNL 122
P+ T+R++ NL
Sbjct: 644 PEKTTLRVMKNL 655
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA+ RRW D +R S+ G+KKTP S E+ +SHP +
Sbjct: 425 YVLLSNLYASERRWSDVQVIRRSMLKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDV 484
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ + E ++ EGYVP T L D+E+E+K+ L YHS + AI F ++TP G IR+
Sbjct: 485 YALLEKITELLKLEGYVPHTANVLADIEEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRV 544
Query: 119 INNL 122
+ NL
Sbjct: 545 MKNL 548
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 81/133 (60%), Gaps = 11/133 (8%)
Query: 1 MINLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS--------- 51
+I+ N Y+ L+N Y+A +W++ A+ R ++++G++K SW IK+
Sbjct: 607 LIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVED 666
Query: 52 --HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIS 109
HP + I + + +++E +++ G++P T+ LHD+E+E K+ +L YHS + AI FG ++
Sbjct: 667 VIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLN 726
Query: 110 TPDGRTIRLINNL 122
TP+ +R++ NL
Sbjct: 727 TPENTALRIMKNL 739
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS---------- 51
I+ NN Y ++N Y+A RW D AR+ + + K ++K SWT I+S
Sbjct: 630 IDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDV 689
Query: 52 -HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
HP R + ++E ++ G+VP + LHDV+DE K+ LL HS + AI FG IST
Sbjct: 690 VHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLIST 749
Query: 111 PDGRTIRLINNL 122
P+ T+R++ NL
Sbjct: 750 PEKTTLRVMKNL 761
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y++LSN YA+ +W + + +R +++ K + K CSW E++ SHP I
Sbjct: 683 YILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEI 742
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L++L ++++ GYVP LHDVE+EQK+ LL HS + A+ FG IST + IR+
Sbjct: 743 YDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRV 802
Query: 119 INNL 122
NL
Sbjct: 803 FKNL 806
>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
Length = 610
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YVILSN YAAAR WKD RLR + K + K P SW + + HP + I
Sbjct: 444 YVILSNIYAAARMWKDVFRLRKLMLKKTVIKEPGRSWMILDKVIHTFHSSERFHPRKEDI 503
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
N + +++ ++ G+VP LHDV+DEQK+ +L HS + AI FG +STP TI++
Sbjct: 504 NVKINEIYAAIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQV 563
Query: 119 INNL 122
+ NL
Sbjct: 564 MKNL 567
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 81/133 (60%), Gaps = 11/133 (8%)
Query: 1 MINLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS--------- 51
+I+ N Y+ L+N Y+A +W++ A+ R ++++G++K SW IK+
Sbjct: 607 LIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVED 666
Query: 52 --HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIS 109
HP + I + + +++E +++ G++P T+ LHD+E+E K+ +L YHS + AI FG ++
Sbjct: 667 VIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLN 726
Query: 110 TPDGRTIRLINNL 122
TP+ +R++ NL
Sbjct: 727 TPENTALRIMKNL 739
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS------------HPYRLR 57
Y++LSN YA+ RW D A LR ++R K + K+P CSW E++ HP
Sbjct: 536 YILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHMFTGGVSTKHPELSS 595
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I + L+ L + + GY P + LHDV++E+K L +HS R A+ FG + P+G IR
Sbjct: 596 IMKMLEKLDGMLREAGYYPDSSFVLHDVDEEEKVRSLGHHSERLAVAFGLLKVPEGMPIR 655
Query: 118 LINNL 122
++ NL
Sbjct: 656 VMKNL 660
>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
Length = 674
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 76/132 (57%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
++ +N YV+LSN YA AR WKD R+R+ V+ + ++K P S E+K
Sbjct: 500 LDASNSGYYVLLSNIYAEARMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDK 559
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP + I L+ L ERM++ GYVP T LHD+++E+K++ L HS + A+ F +++
Sbjct: 560 SHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNS 619
Query: 111 PDGRTIRLINNL 122
I +I NL
Sbjct: 620 VPRSVIHIIKNL 631
>gi|376338373|gb|AFB33718.1| hypothetical protein 2_9455_01, partial [Pinus cembra]
Length = 156
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 65/112 (58%), Gaps = 11/112 (9%)
Query: 22 RWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRINEALKDLFERME 70
RW D A +R +++KG+KK P CSW E+ SHP I L L +M+
Sbjct: 2 RWNDAANVRKMMKDKGLKKQPGCSWIEVNNKMYSFVVGDTSHPQTEEIYALLDALAGQMK 61
Query: 71 QEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
+ GY+P T LHDVE+EQKK+LL +HS + AI FG I+TP +I + NL
Sbjct: 62 EAGYLPDTDFVLHDVEEEQKKDLLCHHSEKLAIAFGLINTPPWTSITVTKNL 113
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTE-----------IKSHPYRLRI 58
YV+L+N Y++A W +R +++ +G++K P CSW E SHP ++
Sbjct: 720 YVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKL 779
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L+ERM +EGY+P T LH+VE+++K+ LL HS + AI FG ++T G IR+
Sbjct: 780 RGYLETLWERMRKEGYIPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRV 839
Query: 119 INNL 122
NL
Sbjct: 840 AKNL 843
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 72/128 (56%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPY 54
N YV+L+N YA A +W++ +LR + +G++K P CSW EIK SHP
Sbjct: 654 NTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPL 713
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+I LK RM++EG+ P + AL +D +K+ L HS + A+ FG +S P G+
Sbjct: 714 ANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGK 773
Query: 115 TIRLINNL 122
T+R+ NL
Sbjct: 774 TVRVTKNL 781
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV L+N YA A +W D +R+R +++ + KTP SW EIK HP I
Sbjct: 496 YVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLI 555
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+E L L ERM+ GYVP LHDV++ K +L HS + AI FG IST G T+R+
Sbjct: 556 HEKLGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTAPGMTLRI 615
Query: 119 INNL 122
NL
Sbjct: 616 FKNL 619
>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
Length = 960
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 12/124 (9%)
Query: 11 VILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRIN 59
V++SN +A RW D ++R ++ GM+K P CSW E+ KSHP I
Sbjct: 794 VLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIY 853
Query: 60 EALKDLFERMEQE-GYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L ++ ++E+E GYV TK LH+V++ +K +LH HS R AI +G + TPD +R+
Sbjct: 854 EKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRI 913
Query: 119 INNL 122
NL
Sbjct: 914 TKNL 917
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS---------- 51
I+ NN Y ++N Y+A RW D AR+ + + K ++K SWT I+S
Sbjct: 630 IDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDV 689
Query: 52 -HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
HP R + ++E ++ G+VP + LHDV+DE K+ LL HS + AI FG IST
Sbjct: 690 VHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLIST 749
Query: 111 PDGRTIRLINNL 122
P+ T+R++ NL
Sbjct: 750 PEKTTLRVMKNL 761
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 71/131 (54%), Gaps = 11/131 (8%)
Query: 3 NLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS----------- 51
NL N Y++LSN YAA W ARLR +++ G+KK P CS E+ +
Sbjct: 389 NLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLN 448
Query: 52 HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTP 111
HP R I L+++ ++ GY P T LHD+ + +K+ L HS + AI FG I+T
Sbjct: 449 HPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQ 508
Query: 112 DGRTIRLINNL 122
G TI+++ NL
Sbjct: 509 PGTTIKIVKNL 519
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 72/128 (56%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPY 54
N YV+L+N YA A +W++ +LR + +G++K P CSW EIK SHP
Sbjct: 527 NTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPL 586
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+I LK RM++EG+ P + AL +D +K+ L HS + A+ FG +S P G+
Sbjct: 587 ANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGK 646
Query: 115 TIRLINNL 122
T+R+ NL
Sbjct: 647 TVRVTKNL 654
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS---------- 51
I NN YV+LSN YA A RW + AR+R + +KGMKK P CS EI S
Sbjct: 496 IEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIGDK 555
Query: 52 -HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
HP I L+++ +++ G+VP T E L ++E+E K+ L +HS + AI FG IST
Sbjct: 556 FHPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQEMEEEFKEGALRHHSEKLAIAFGLIST 615
Query: 111 PDGRTIRLINNL 122
+ ++ NL
Sbjct: 616 KPETKLTIVKNL 627
>gi|302764606|ref|XP_002965724.1| hypothetical protein SELMODRAFT_85078 [Selaginella moellendorffii]
gi|300166538|gb|EFJ33144.1| hypothetical protein SELMODRAFT_85078 [Selaginella moellendorffii]
Length = 258
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y +L N YAA R+ D R+R S+ ++G+KK P S+ E+K +HP R I
Sbjct: 135 YTLLGNVYAATERYGDQMRVRKSMTDRGLKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEI 194
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L RM + YVP TK+ LH V +E+K+ L+ HS + AI FG I+TP G + +
Sbjct: 195 LLELEKLGGRMREARYVPNTKDVLHAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLI 254
Query: 119 INNL 122
+ NL
Sbjct: 255 VKNL 258
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 80/134 (59%), Gaps = 18/134 (13%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHP 53
+N YV+LSN YA+A RW++ A +R +R++G+KK P CSW E+K SHP
Sbjct: 545 SNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHP 604
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDE-----QKKNLLHYHSGRFAIVFGAI 108
I E L+++ +M++ GYVP + AL V+D+ +K+ L +HS + A+ FG I
Sbjct: 605 MIKEIYEFLEEMSGKMKRAGYVPDVRWAL--VKDDGTRGGEKEIRLGHHSEKLAVAFGLI 662
Query: 109 STPDGRTIRLINNL 122
ST DG + ++ NL
Sbjct: 663 STKDGEPVLVVKNL 676
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 72/133 (54%), Gaps = 11/133 (8%)
Query: 1 MINLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK---------- 50
M+N + YV+LSN YA A RW D A +R + KG+KK P S E+
Sbjct: 485 MLNPEHSGYYVLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGISNVELNDGVHTFLAGD 544
Query: 51 -SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIS 109
SHP +I E L L +M++ GY+P T ALHDVE+E K+ L HS + A+ F I+
Sbjct: 545 HSHPQSKKIYEELDVLVGKMKELGYMPETDSALHDVEEEDKEYHLAVHSEKLAVAFAIIN 604
Query: 110 TPDGRTIRLINNL 122
T G IR+ NL
Sbjct: 605 TKPGTPIRVTKNL 617
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 80/134 (59%), Gaps = 18/134 (13%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHP 53
+N YV+LSN YA+A RW++ A +R +R++G+KK P CSW E+K SHP
Sbjct: 545 SNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHP 604
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDE-----QKKNLLHYHSGRFAIVFGAI 108
I E L+++ +M++ GYVP + AL V+D+ +K+ L +HS + A+ FG I
Sbjct: 605 MIKEIYEFLEEMSGKMKRAGYVPDVRWAL--VKDDGTRGGEKEIRLGHHSEKLAVAFGLI 662
Query: 109 STPDGRTIRLINNL 122
ST DG + ++ NL
Sbjct: 663 STKDGEPVLVVKNL 676
>gi|383165816|gb|AFG65812.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
gi|383165818|gb|AFG65813.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
Length = 156
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 64/112 (57%), Gaps = 11/112 (9%)
Query: 22 RWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRINEALKDLFERME 70
RW D A +R ++ KG+KK P CSW E+ SHP I L L +M+
Sbjct: 2 RWNDAANVRRMMKEKGLKKQPGCSWIEVNNKMHSFVVGDTSHPQTEEIYTLLDALAGQMK 61
Query: 71 QEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
+ GY+P T LHDVE+EQKK+LL +HS + AI FG ISTP +I + NL
Sbjct: 62 EAGYLPDTDFVLHDVEEEQKKDLLCHHSEKLAIAFGLISTPPWTSITVTKNL 113
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 71/131 (54%), Gaps = 11/131 (8%)
Query: 3 NLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS----------- 51
NL N Y++LSN YAA W ARLR +++ G+KK P CS E+ +
Sbjct: 402 NLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLN 461
Query: 52 HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTP 111
HP R I L+++ ++ GY P T LHD+ + +K+ L HS + AI FG I+T
Sbjct: 462 HPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQ 521
Query: 112 DGRTIRLINNL 122
G TI+++ NL
Sbjct: 522 PGTTIKIVKNL 532
>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
Length = 635
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 70/132 (53%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
I N YV L+N YA+ + + R + KG+ K PA SW E+ K
Sbjct: 461 IEPENPATYVTLANIYASVGLFDEVENTRRIMELKGITKMPASSWIEVGTRMHVFLVGDK 520
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
HP ++ LK L+ +M +EGYV T LHDVEDEQK+ + YHS R A+ FG I+T
Sbjct: 521 LHPQAEQVYALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIAT 580
Query: 111 PDGRTIRLINNL 122
P G I++ NL
Sbjct: 581 PKGAPIKVFKNL 592
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV LSN YA + +W+ AR+R + N+G+KK ACSW E+K SHP I
Sbjct: 471 YVHLSNIYAQSGKWEKAARVRKLMTNRGLKKILACSWIELKGKTHGFLVGDASHPRSDEI 530
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L M GYVP H+V+D++K+N++ HS R AI FG ISTP G + +
Sbjct: 531 YGELERLEGLMSDAGYVPDIIPVFHNVDDDEKRNMVRSHSERLAIAFGLISTPPGTKLLV 590
Query: 119 INNL 122
NL
Sbjct: 591 TKNL 594
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 71/131 (54%), Gaps = 11/131 (8%)
Query: 3 NLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS----------- 51
NL N Y++LSN YAA W ARLR +++ G+KK P CS E+ +
Sbjct: 455 NLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLN 514
Query: 52 HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTP 111
HP R I L+++ ++ GY P T LHD+ + +K+ L HS + AI FG I+T
Sbjct: 515 HPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQ 574
Query: 112 DGRTIRLINNL 122
G TI+++ NL
Sbjct: 575 PGTTIKIVKNL 585
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA + W++ A++R + + +KK P SW E+K SHP + +I
Sbjct: 705 YVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQI 764
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+DL R++ GY P T L D++DE K+ +L HS R AI FG I+TP G + +
Sbjct: 765 YMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLI 824
Query: 119 INNL 122
I NL
Sbjct: 825 IKNL 828
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
I+ +N YV LSN YAAAR W A +RV ++ KG+ K CSW E+ K
Sbjct: 520 IDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDK 579
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP I ++ + R+++ G+V +LHD+ DE+ + L HS R AI +G IST
Sbjct: 580 SHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLIST 639
Query: 111 PDGRTIRLINNL 122
P G +R+ NL
Sbjct: 640 PQGTPLRITKNL 651
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++ N+ VYVILSN YAAA WK+ ++R + ++G+ K P SW E+ K
Sbjct: 806 LDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDK 865
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
+HP I+ L L M++ GYVP T+ LHDVED +K++ L +HS R AI +G + T
Sbjct: 866 THPQIEEIHAELGRLHMEMKKLGYVPDTRYVLHDVEDSEKEHALCHHSERLAIAYGLLKT 925
Query: 111 PDGRTIRLINNL 122
P I + NL
Sbjct: 926 PPLTPIVISKNL 937
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 67/129 (51%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHP 53
N+ VYV LSN YA RW D R + K + K P CSW E+ K+HP
Sbjct: 618 NDATVYVTLSNMYAEVGRWADAENQRRLMEQKEISKEPGCSWIEVNNKMYKFFSHDKAHP 677
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
++ E LK L +++ GY P T LH + K+ L+ YHS + A+ FG +S P G
Sbjct: 678 EMPKVYEKLKQLVRQIQDIGYSPPTTTVLHPESRQPKEQLILYHSEKLAVCFGLLSLPPG 737
Query: 114 RTIRLINNL 122
+ IR++ NL
Sbjct: 738 KPIRVLKNL 746
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 11 VILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTE 48
++LSN YA A RW + A+++ ++ + K P CSW E
Sbjct: 1282 LLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 1319
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 76/124 (61%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
Y++LSNAY+++ +WK+ A +R ++R +G++K P CS E+ + HP + +I
Sbjct: 455 YILLSNAYSSSGKWKEAAEVRTNMREEGIEKEPGCSSIEVNNEIHEFLLGDLRHPQKEKI 514
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L++L + + EGY P T+ LHD+E +K+ L HS R AI +G IST T+R+
Sbjct: 515 YKKLEELNQILRLEGYTPATEVVLHDIEKSEKEWALAIHSERLAICYGLISTKPLTTLRV 574
Query: 119 INNL 122
+ NL
Sbjct: 575 VKNL 578
>gi|357509743|ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360204|gb|ABN08217.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355500175|gb|AES81378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 74/125 (59%), Gaps = 11/125 (8%)
Query: 9 VYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTE-----------IKSHPYRLR 57
++V+LSNAYAAA RW++ A+ R +R++G+KK SW E +SH +
Sbjct: 429 LHVMLSNAYAAAGRWEEAAKARKMMRDRGIKKETGLSWVEEGNRIHTFAAGDRSHAKSVE 488
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I + L +L E M++ GYV T L +V+ E+K + YHS R AI FG I+ P G+ IR
Sbjct: 489 IYDKLDELGEEMDKAGYVADTSFVLKEVDGEEKSRSIRYHSERLAIAFGFITFPHGQPIR 548
Query: 118 LINNL 122
++ NL
Sbjct: 549 VMKNL 553
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
I+ +N YV LSN YAAAR W A +RV ++ KG+ K CSW E+ K
Sbjct: 520 IDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDK 579
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP I ++ + R+++ G+V +LHD+ DE+ + L HS R AI +G IST
Sbjct: 580 SHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLIST 639
Query: 111 PDGRTIRLINNL 122
P G +R+ NL
Sbjct: 640 PQGTPLRITKNL 651
>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
Length = 610
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 68/129 (52%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HP 53
N YV L+N YA A +W D +R+R +++ + KTP SW EIK HP
Sbjct: 439 QNAGAYVQLANIYAVANKWADVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHP 498
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
I++ L L M+ GYVP ALHDVED K +L HS + AI FG IST G
Sbjct: 499 QLGLIHDKLDRLQMLMKAMGYVPDLDFALHDVEDSLKSQMLMRHSEKLAIAFGLISTSPG 558
Query: 114 RTIRLINNL 122
T+R+ NL
Sbjct: 559 MTLRIFKNL 567
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA + W++ A++R + + +KK P SW E+K SHP + +I
Sbjct: 701 YVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQI 760
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+DL R++ GY P T L D++DE K+ +L HS R AI FG I+TP G + +
Sbjct: 761 YMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLI 820
Query: 119 INNL 122
I NL
Sbjct: 821 IKNL 824
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 78/125 (62%), Gaps = 13/125 (10%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+ +LSN YA+A +WKD A++R +++ G+KK PACSW EI+ SHP + ++
Sbjct: 502 HTLLSNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKV 561
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNL-LHYHSGRFAIVFGAISTPDGRTIR 117
E ++L +++++ GYVP T +H D+Q+K L L YHS + A+ F ++T G IR
Sbjct: 562 YEMWENLNQKIKEIGYVPDTSH-VHVFVDQQEKELNLQYHSEKLALAFALLNTKPGSVIR 620
Query: 118 LINNL 122
++ N+
Sbjct: 621 IMKNI 625
>gi|326524233|dbj|BAK00500.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 688
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA +W+DT++LR + +G++K P SW +K +HP I
Sbjct: 525 YVMLSNMYATHSKWRDTSKLRSLMLERGVRKQPGRSWIHLKNTVHTFVAGDAAHPRSSEI 584
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L ER+++ GY HDVE+EQ++ L +HS + A+ FG ISTP G +R+
Sbjct: 585 YTYLEKLMERLKELGYTSRIDLVAHDVEEEQRETALKFHSEKLAMAFGIISTPSGTPLRI 644
Query: 119 INNL 122
NL
Sbjct: 645 FKNL 648
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA+A RW D A++R+S++ KG++K P S +I+ SHP +I
Sbjct: 675 YVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSVIQIRGKTHEFTSGDESHPEMRKI 734
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L +L +R G+VP L DV++++K +L HS + A+ FG IS+ G TIR+
Sbjct: 735 EAMLDELSQRASDLGHVPDLSNVLMDVDEQEKIFMLSRHSEKLAMAFGLISSNKGTTIRI 794
Query: 119 INNL 122
+ NL
Sbjct: 795 VKNL 798
>gi|20197649|gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 472
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA + W++ A++R + + +KK P SW E+K SHP + +I
Sbjct: 305 YVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQI 364
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+DL R++ GY P T L D++DE K+ +L HS R AI FG I+TP G + +
Sbjct: 365 YMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLI 424
Query: 119 INNL 122
I NL
Sbjct: 425 IKNL 428
>gi|190612837|gb|ACE80796.1| pentatricopeptide repeat protein [Isoetes engelmannii]
Length = 152
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 70/116 (60%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRINEALKDLF 66
A RW+D AR+R + ++G++K P SW E+ SHP +I L++L
Sbjct: 1 GALGRWEDKARVRKLMEDQGVRKEPGRSWIEVNGSVHSFVVEDVSHPKTEQIYIELQNLS 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
E++ Q GYVP T+ LHD+ +E+KK L +HS + AI FG ISTP G TIR+I NL
Sbjct: 61 EQIVQAGYVPDTRFVLHDLTEEEKKFSLCHHSEKLAIAFGLISTPQGATIRVIKNL 116
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN A + RW+D +++R ++R + ++K P SW E+K SH + I
Sbjct: 481 YVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREI 540
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L+++ R+ Q GY P HD+EDE+K+ L +HS + AI F +S P+G IR+
Sbjct: 541 VECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPIRV 600
Query: 119 INNL 122
+ NL
Sbjct: 601 MKNL 604
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV LSN YA+ W + + +R+ ++ K ++K P CS +I SHP I
Sbjct: 480 YVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEI 539
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
N L ++ +++ GY P T + L ++E+E K+N+LHYHS + A FG IST G+ IR+
Sbjct: 540 NSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRI 599
Query: 119 INNL 122
+ NL
Sbjct: 600 VKNL 603
>gi|361068227|gb|AEW08425.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
Length = 156
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 65/112 (58%), Gaps = 11/112 (9%)
Query: 22 RWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRINEALKDLFERME 70
RW D A +R +++KG+KK P CSW E+ SHP I L L +M+
Sbjct: 2 RWNDAANVRKMMKDKGLKKKPGCSWIEVNNKMYSFVVGDTSHPQTEEIYALLDALAGQMK 61
Query: 71 QEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
+ GY+P T LHDVE+EQKK+LL +HS + AI FG I+TP +I + NL
Sbjct: 62 EAGYLPDTDFVLHDVEEEQKKDLLCHHSEKLAIAFGLINTPPWTSITVTKNL 113
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y++LSN YA+ RW D A LR S++ K + K SW E+ SHP +I
Sbjct: 654 YILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDNQVHKFHVGDTSHPQARKI 713
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L +L +++ GY+P T LHDVEDEQK+ L HS + A+ + ISTP + IR+
Sbjct: 714 YDELDELALKIKNLGYIPNTDFVLHDVEDEQKEQYLFQHSEKIAVAYALISTPKPKPIRV 773
Query: 119 INNL 122
NL
Sbjct: 774 FKNL 777
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y++LSN +A+A +W++ A +R ++ + + K CSW E++ SHP I
Sbjct: 557 YILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKVHKFYVGDTSHPQAQEI 616
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L L ++++ GY+P+T LHDVE+EQK+ L HS + A+ +G IST R IR+
Sbjct: 617 YDELDQLALKIKELGYIPSTDFVLHDVEEEQKEQYLFQHSEKIAVAYGFISTSTSRPIRV 676
Query: 119 INNL 122
NL
Sbjct: 677 FKNL 680
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y++LSN YA+ +W + + +R +++ K + K CSW E++ SHP I
Sbjct: 683 YILLSNLYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEI 742
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L++L ++++ GYVP LHDVE+EQK+ LL HS + A+ FG IST + IR+
Sbjct: 743 YDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRV 802
Query: 119 INNL 122
NL
Sbjct: 803 FKNL 806
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YAA+ +W++ A++R + +G+KK P SW E+ SHP +I
Sbjct: 516 YVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEKI 575
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L +L + ++ GYVPTT L D+E+E+K++ + HS + A+ FG IST I +
Sbjct: 576 YAKLGELAKDLKAAGYVPTTDHVLFDIEEEEKEHFIGCHSEKLAVAFGLISTAPNDKILV 635
Query: 119 INNL 122
+ NL
Sbjct: 636 VKNL 639
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA A +W+D A+ R + G++K P +W E+ K+HP I
Sbjct: 458 YVLLSNIYANAGKWEDMAKTRDLMTKGGLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEI 517
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ LK L E++E GY P T + L+DV++E K+ LL+ HS + AI FG + P G IR+
Sbjct: 518 YKMLKRLGEKLEVAGYHPDTNDVLYDVDEEVKQGLLYSHSEKLAIAFGLLVLPQGHPIRI 577
Query: 119 INNL 122
NL
Sbjct: 578 TKNL 581
>gi|357139833|ref|XP_003571481.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Brachypodium distachyon]
Length = 617
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 70/131 (53%), Gaps = 11/131 (8%)
Query: 3 NLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS----------- 51
N N YV L+N YA A +W D +R+R +++ + KTP SW EI
Sbjct: 444 NPQNAGAYVQLANIYAVANQWADVSRVRRWMKDNAVVKTPGYSWVEINGVIHVFRSNDRL 503
Query: 52 HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTP 111
HP I+E L L ERM+ GYVP ALHDV++ K +L HS + AI FG +ST
Sbjct: 504 HPQLSLIHERLCQLEERMKAMGYVPDLDFALHDVDESLKVQMLMRHSEKLAIAFGLLSTA 563
Query: 112 DGRTIRLINNL 122
G T+R+ NL
Sbjct: 564 PGITLRIFKNL 574
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPY 54
N YV+LSN YAA W + +R + + G+KK P CSW ++K SHP
Sbjct: 590 NPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQ 649
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+I E + ++ + M + G+ P ALHDVE+++++ +L HS + A+VFG ++TPDG
Sbjct: 650 IDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGT 709
Query: 115 TIRL 118
+++
Sbjct: 710 PLQV 713
>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YVILSN YAAA WKD R+R + + K PA SW + + HP + I
Sbjct: 448 YVILSNIYAAAGMWKDVFRVRKLMLENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDI 507
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
N +K+++ ++ G+VP LHDV+DEQK+ +L HS + AI FG ++TP G TI++
Sbjct: 508 NAKIKEVYVDVKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIQV 567
Query: 119 INNL 122
+ NL
Sbjct: 568 MKNL 571
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 72/128 (56%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPY 54
N YV+++N YA A +W++ RLR + +G++K P CSW EIK S+P
Sbjct: 701 NTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPE 760
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+I L+ + RM +EGY P TK AL D E+ +K+ L HS + A+ G IS+ G+
Sbjct: 761 TEKIEAFLRGVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGK 820
Query: 115 TIRLINNL 122
IR+ NL
Sbjct: 821 IIRVTKNL 828
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
Y +LSN YA +++W +R +R+ G+KK P CSW E+ +SHP + +
Sbjct: 416 YTVLSNIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHAFIIGDESHPQIVEV 475
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
N+ L L R+ GYVP T L D+E EQ ++ L +HS + A+ FG ++ P + IR+
Sbjct: 476 NKKLNQLIHRLIGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPSEKVIRI 535
Query: 119 INNL 122
NL
Sbjct: 536 RKNL 539
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++ N+ V L+N YA+ R D A R+ +R+ KTP CSW EI
Sbjct: 489 LDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDS 548
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP LRI +++L +M+ GY P T +H++++E+K++ L HS + A+ FG I+T
Sbjct: 549 SHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINT 608
Query: 111 PDGRTIRLINNL 122
+G TIR++ NL
Sbjct: 609 SEGTTIRIVKNL 620
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 77/136 (56%), Gaps = 17/136 (12%)
Query: 4 LNNMRV------YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK------- 50
L NM+V YV +SN +A A +W +++ ++R++G++K PA SW EIK
Sbjct: 637 LFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDRGVRKLPAYSWVEIKHKVHVFS 696
Query: 51 ----SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFG 106
HP +L I ++ L E+ME+EGY P A +V+ E K + L YHS R AI F
Sbjct: 697 ANDDKHPQQLEILRKIEMLAEQMEKEGYDPDISCAHQNVDKESKIDSLKYHSERLAIAFA 756
Query: 107 AISTPDGRTIRLINNL 122
I+TP+G I ++ NL
Sbjct: 757 LINTPEGSPILVMKNL 772
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN Y+AA +W++ A+ R ++ +G+ K P CSW E+ +SHP I
Sbjct: 274 YVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEI 333
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ ++ +++ GYVP ALHD+++E K+ L YHS + A+ FG ++ P G IR+
Sbjct: 334 YSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRI 393
Query: 119 INNL 122
NL
Sbjct: 394 FKNL 397
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 70/129 (54%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHP 53
N+ YV+LSN YA A W+ R S+R+K +KK P S EI K HP
Sbjct: 526 NDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDPGFSSIEINQEIYTFMAGEKDHP 585
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+I LK L ++++ GYVP T L DV D+ KK++L++HS + AI FG + T G
Sbjct: 586 QYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPG 645
Query: 114 RTIRLINNL 122
IR+ NL
Sbjct: 646 TIIRITKNL 654
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 11/115 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y++LSN YA+ W + R+R ++NKG++K P CSW E+K SHP +I
Sbjct: 592 YILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQI 651
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
E L L M++ GY P L DVE++ K+ +L HS + A+VFG ++TP G
Sbjct: 652 IENLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSEKLAVVFGLLNTPPG 706
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 68/128 (53%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPY 54
N +Y++LSN YA ARRW +R +RN+G+KKTP S E SHP
Sbjct: 635 NPGIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPN 694
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
I L+ L +E GYVP T L DV++E K +L HS R AI FG ++TP G
Sbjct: 695 WEEIYHFLESLRSAVETSGYVPDTSCVLRDVDEEMKVRMLWGHSERLAIAFGLLTTPAGS 754
Query: 115 TIRLINNL 122
IR+ NL
Sbjct: 755 LIRITKNL 762
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 75/133 (56%), Gaps = 11/133 (8%)
Query: 1 MINLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI----------- 49
M L + YV +SN YA A +W++ A+++ ++R +G+KK A SW EI
Sbjct: 644 MDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTAND 703
Query: 50 KSHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIS 109
++HP +I + L E M++EGY P T L +V++E K L YHS R AI F I+
Sbjct: 704 RTHPQTEQIRRKINSLVELMDKEGYKPDTSCTLQNVDEEMKIESLKYHSERLAIAFALIN 763
Query: 110 TPDGRTIRLINNL 122
TP+G I ++ NL
Sbjct: 764 TPEGSPIIIMKNL 776
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 71/123 (57%), Gaps = 11/123 (8%)
Query: 11 VILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRIN 59
V L+N YA+ R D A R+ +R+ KTP CSW EI SHP LRI
Sbjct: 467 VYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIY 526
Query: 60 EALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLI 119
+++L +M+ GY P T +H++++E+K++ L HS + A+ FG I+T +G TIR++
Sbjct: 527 SMIRELKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIV 586
Query: 120 NNL 122
NL
Sbjct: 587 KNL 589
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA+ +RW D ++R + G++K P S E+ KSHP I
Sbjct: 429 YVLLSNMYASEQRWSDVQKIRKQMLRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMI 488
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
LK++ +R+ EGYVP DVE+E+K+N L YHS + AI F ISTP+ IR+
Sbjct: 489 YAKLKEMTDRLRLEGYVPQISNVYVDVEEEEKENALVYHSEKIAIAFMLISTPERWPIRV 548
Query: 119 INNL 122
+ NL
Sbjct: 549 VKNL 552
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/124 (37%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN Y+AA +WK+ +R + K ++K CSW +IK SHP +I
Sbjct: 664 YVLLSNIYSAAGKWKEKDEVRKLMDTKKVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQI 723
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ + +++QEGY P T HDV ++QK+ +L HS R A+ FG I+TP + +
Sbjct: 724 YAKLRAMTAKLKQEGYCPDTSFVPHDVAEDQKEAMLAMHSERLALAFGLIATPPAAPLHI 783
Query: 119 INNL 122
NL
Sbjct: 784 FKNL 787
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN Y ++++W++ R R + +GM+K P CS E+ SH I
Sbjct: 494 YVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVHEFVKGDSSHRQSSEI 553
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
NE L+D+ +++ GYVP E L D+ +E+K+ L HS + AI FG +ST G IR+
Sbjct: 554 NEMLEDMISKLKNAGYVPDKSEVLFDMAEEEKETELSLHSEKLAIAFGLLSTSVGTPIRV 613
Query: 119 INNL 122
+ NL
Sbjct: 614 VKNL 617
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 78/133 (58%), Gaps = 11/133 (8%)
Query: 1 MINLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS--------- 51
+I+ NN Y+ L+N +A +W+D A++R S+++K +KK SW +IK+
Sbjct: 610 LIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVED 669
Query: 52 --HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIS 109
HP R I + +++ +++ G++P T LHD+E E K+ +L +HS + AI F I+
Sbjct: 670 ALHPQRDAIYCMISKIWKEIKKMGFIPDTNSVLHDLEQEVKEQILRHHSEKLAIAFALIN 729
Query: 110 TPDGRTIRLINNL 122
TP T+R++ NL
Sbjct: 730 TPKHTTVRIMKNL 742
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y +LSN YA +++W +R +R++G+KK P CSW E+ SHP + +
Sbjct: 464 YTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEV 523
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
++ L L R+ GYVP T L D+E EQ ++ L +HS + A+ FG ++ P + IR+
Sbjct: 524 SKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRI 583
Query: 119 INNL 122
NL
Sbjct: 584 RKNL 587
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN Y+AA +W++ A+ R ++ +G+ K P CSW E+ +SHP I
Sbjct: 620 YVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEI 679
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ ++ +++ GYVP ALHD+++E K+ L YHS + A+ FG ++ P G IR+
Sbjct: 680 YSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRI 739
Query: 119 INNL 122
NL
Sbjct: 740 FKNL 743
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 76/131 (58%), Gaps = 14/131 (10%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPY 54
N YV+LSN YA+A RW++ A ++ +R +G+KK P CSW EI SHP
Sbjct: 549 NAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPM 608
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEAL---HDVEDEQKKNLLHYHSGRFAIVFGAISTP 111
I+ + + ++M+Q GYVP + AL +VE ++++ L YHS + A+ FG IST
Sbjct: 609 IKEIHVYMGKMLKKMKQAGYVPDIRWALVKDEEVEPDERERRLLYHSEKLAVAFGLISTE 668
Query: 112 DGRTIRLINNL 122
+G I ++ NL
Sbjct: 669 EGVPILVVKNL 679
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y +LSN YA +++W +R +R++G+KK P CSW E+ SHP + +
Sbjct: 464 YTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEV 523
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
++ L L R+ GYVP T L D+E EQ ++ L +HS + A+ FG ++ P + IR+
Sbjct: 524 SKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRI 583
Query: 119 INNL 122
NL
Sbjct: 584 RKNL 587
>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
Length = 590
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 68/119 (57%), Gaps = 11/119 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YVILSN YAAA WKD ++R + K + K P SW + + HP + I
Sbjct: 417 YVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDI 476
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
N +K++F ++ G+VP LHDV+DEQK+ +L HS + AI FG ++TP G TIR
Sbjct: 477 NAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIR 535
>gi|302799360|ref|XP_002981439.1| hypothetical protein SELMODRAFT_114283 [Selaginella moellendorffii]
gi|300150979|gb|EFJ17627.1| hypothetical protein SELMODRAFT_114283 [Selaginella moellendorffii]
Length = 283
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YAA RW D AR+R + ++G+KK S E+ ++HP R I
Sbjct: 117 YVLLSNIYAARDRWNDVARIRKLMADRGVKKPSGRSSIEVGDKIHEFVAGDRAHPRREEI 176
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L L RM+ GY+ AL D E+E+K+ +L YHS + AI FG+++TP G+T+ +
Sbjct: 177 YQELSRLGSRMKALGYIQDRSSALRDGEEEEKEQMLWYHSEKLAIAFGSVATPAGKTLYV 236
Query: 119 INNL 122
I NL
Sbjct: 237 IKNL 240
>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
Length = 719
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN Y+AA +W++ A+ R ++ +G+ K P CSW E+ +SHP I
Sbjct: 553 YVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEI 612
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ ++ +++ GYVP ALHD+++E K+ L YHS + A+ FG ++ P G IR+
Sbjct: 613 YSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRI 672
Query: 119 INNL 122
NL
Sbjct: 673 FKNL 676
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+L+N YA+A W D A++R +++ +KK PA SW E+K SHP I
Sbjct: 711 HVLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDI 770
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L +L + M + GYVP + LHDV+ +K+ LL +HS R A+ F ISTP G IR+
Sbjct: 771 YAKLDELGDLMTKAGYVPNVEVDLHDVDKNEKELLLSHHSERLAVAFALISTPAGAPIRV 830
Query: 119 INNL 122
NL
Sbjct: 831 KKNL 834
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 74/132 (56%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRLRINEA 61
+N ++ YV++SN YAA +W +R S++ +G+KK P CSW EI++ Y
Sbjct: 774 LNPDDTGYYVLVSNVYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTK 833
Query: 62 LKDLFER-----------MEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
+ FE M +EGY+ + LHD+++++K+++L HS R AI FG ++T
Sbjct: 834 FSEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNT 893
Query: 111 PDGRTIRLINNL 122
G ++++ NL
Sbjct: 894 KPGTPLQVMKNL 905
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+L+N YA+A W + A++R +++ +KK PA SW EIK SHP I
Sbjct: 716 HVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPMTRDI 775
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L +L + M + GYVP + LHDV+ +K+ LL +HS R A+ F ISTP G IR+
Sbjct: 776 YGKLAELGDLMNKAGYVPNVEVDLHDVDRSEKELLLSHHSERLAVAFALISTPSGAPIRV 835
Query: 119 INNL 122
NL
Sbjct: 836 KKNL 839
>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
Length = 588
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YVILSN YAAA WKD R+R + K + K P SW + + HP + I
Sbjct: 422 YVILSNIYAAAGMWKDVFRVRKLMLKKTVIKEPGRSWMILDKVIHTFHSCERFHPRKEDI 481
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
N +K+++ ++ G+VP LHDV+DEQK+ +L HS + AI FG +STP TI++
Sbjct: 482 NAKIKEIYVAIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQV 541
Query: 119 INNL 122
+ NL
Sbjct: 542 MKNL 545
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA A RW+D +R ++ KG+KK P S E+ +SHP +I
Sbjct: 512 YVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQI 571
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L +M++ GYVP T ALHDVE+E K+ L HS + AI F ++T G IR+
Sbjct: 572 YEELDVSVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRI 631
Query: 119 INNL 122
NL
Sbjct: 632 TKNL 635
>gi|358357210|gb|AEU08445.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 68/116 (58%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSW-----------TEIKSHPYRLRINEALKDLF 66
AA RW D A++R + ++G++K P S E K HP + I+ L+ LF
Sbjct: 1 AAGGRWDDKAQVRKMMEDRGVRKEPGHSCIVVNDHVHTFVVEDKLHPQIVEIHAELERLF 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
+M++ GY P T+ LHDVEDEQK+ L +HS + AI FG ISTP G IR+I NL
Sbjct: 61 RQMKEAGYQPDTRFVLHDVEDEQKELSLCHHSEKLAIAFGLISTPSGMPIRIIKNL 116
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 76/132 (57%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
I +N YV+LSN Y++ W + A +R ++ +G+ K P CSWT+IK
Sbjct: 748 IEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDK 807
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
H I L++L+ ++ GYVP T+ LHD+++EQK++ L YHS + A+ + ++T
Sbjct: 808 QHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLAT 867
Query: 111 PDGRTIRLINNL 122
P G I+++ NL
Sbjct: 868 PKGMPIQILKNL 879
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 76/132 (57%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
I +N YV+LSN Y++ W + A +R ++ +G+ K P CSWT+IK
Sbjct: 748 IEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDK 807
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
H I L++L+ ++ GYVP T+ LHD+++EQK++ L YHS + A+ + ++T
Sbjct: 808 QHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLAT 867
Query: 111 PDGRTIRLINNL 122
P G I+++ NL
Sbjct: 868 PKGMPIQILKNL 879
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 76/133 (57%), Gaps = 11/133 (8%)
Query: 1 MINLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK---------- 50
M L + YV +SN YAAA +W++ +++ ++R++G+KK PA SW EIK
Sbjct: 650 MEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSAND 709
Query: 51 -SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIS 109
HP I + + L + ME+ GY P T ALH+ +++ K L YHS R AI F IS
Sbjct: 710 RCHPQIEEIRKKIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALIS 769
Query: 110 TPDGRTIRLINNL 122
TP+G I ++ NL
Sbjct: 770 TPEGSPILVMKNL 782
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 75/133 (56%), Gaps = 11/133 (8%)
Query: 1 MINLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI----------- 49
M L + YV +SN YAAA +W++ ++ ++R +G+KK PA SW E+
Sbjct: 644 MEKLRDAAAYVSMSNIYAAAGKWENVRHVKKAMRERGIKKVPAYSWVEVNHKIHVFSSND 703
Query: 50 KSHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIS 109
++HP I + + +L +E+EGY P T + D++++ K L YHS R A+ F IS
Sbjct: 704 QTHPNGDEIVKKINELTTEIEREGYKPDTSSVVQDIDEQMKIESLKYHSERLAVAFALIS 763
Query: 110 TPDGRTIRLINNL 122
TP+G I ++ NL
Sbjct: 764 TPEGCPIVVMKNL 776
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 71/125 (56%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV++SN +A +W + +R + +G++K PACSW EI SH RI
Sbjct: 773 YVLVSNVFAEMGKWNNAKEVRARISERGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERI 832
Query: 59 NEALKDLFERMEQEG-YVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
N L ++ ER+ +EG Y T+ LHDV +E+K ++LH HS R AI FG I+T G +R
Sbjct: 833 NLKLAEITERLRKEGGYTEDTRSVLHDVSEEEKVDVLHRHSERLAISFGLINTRPGMPLR 892
Query: 118 LINNL 122
+ NL
Sbjct: 893 IAKNL 897
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 12/129 (9%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI------------KSHP 53
N YV+LSN YA RW+D LR ++ + + K P CSW E+ K HP
Sbjct: 540 NAGPYVLLSNMYAYKGRWRDVEVLREKIKARSVTKLPGCSWIEVEKKVHMFTGGDSKGHP 599
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+ I + L+ L + + GY P LHDV++E+K + L YHS + A+ +G + P+G
Sbjct: 600 EQPIIMKMLEKLGGLLREAGYCPDGSFVLHDVDEEEKTHSLGYHSEKLAVAYGLLKVPEG 659
Query: 114 RTIRLINNL 122
IR++ NL
Sbjct: 660 MPIRVMKNL 668
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/130 (36%), Positives = 71/130 (54%), Gaps = 11/130 (8%)
Query: 4 LNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSH 52
L N YV+LSN YAAA +W++ R+R +R G++K P CS E+ +SH
Sbjct: 461 LANSGTYVLLSNMYAAAGKWREVGRVRSMMRASGVQKEPGCSAVEVGRRVVEFVAGDRSH 520
Query: 53 PYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPD 112
P I L+++ G+VP T+ LHD++D K+ L HS + A+ FG ISTP
Sbjct: 521 PRSAEIYAKLEEVNSIARARGHVPHTELVLHDLDDAAKERALAVHSEKLALAFGLISTPP 580
Query: 113 GRTIRLINNL 122
I+++ NL
Sbjct: 581 RTGIKIVKNL 590
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 76/133 (57%), Gaps = 11/133 (8%)
Query: 1 MINLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK---------- 50
M L + YV +SN YAAA +W++ +++ ++R++G+KK PA SW EIK
Sbjct: 610 MEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSAND 669
Query: 51 -SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIS 109
HP I + + L + ME+ GY P T ALH+ +++ K L YHS R AI F IS
Sbjct: 670 RCHPQIEEIRKKIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALIS 729
Query: 110 TPDGRTIRLINNL 122
TP+G I ++ NL
Sbjct: 730 TPEGSPILVMKNL 742
>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 923
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA + RW D R+R ++ + K PACSW + K SH + +I
Sbjct: 757 YVLLSNLYATSARWSDVDRVRSHMKTINLNKIPACSWLKQKKEVSTFGIGDHSHKHADKI 816
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L ++ ++ + GYV T ALHD ++EQK+ L HS + A+ +G I+ P+G T+R+
Sbjct: 817 YMKLDEILLKLREVGYVADTSSALHDTDEEQKEQNLWNHSEKLALAYGLITVPEGCTVRI 876
Query: 119 INNL 122
NL
Sbjct: 877 FKNL 880
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
Y++L++ YAAA RW + A +R ++ +KG++ P CS E+ KSHP I
Sbjct: 769 YIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEI 828
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L ++ GYV T LHDV E K+ LL HS + AI FG +STP G +R+
Sbjct: 829 YLELERLHWSIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRV 888
Query: 119 INNL 122
I NL
Sbjct: 889 IKNL 892
>gi|449446363|ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Cucumis sativus]
Length = 576
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRL-----------RI 58
+V+LSN YAA +RW D R+R ++R + +KKTP S+ EIK Y+ I
Sbjct: 410 FVLLSNVYAARQRWDDVGRVRDAMRRRDVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREI 469
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L ++ R++ GY T LHD+ DE K+N L YHS + A+ FG T +G I++
Sbjct: 470 YAKLDEINLRIKAYGYSADTSNVLHDIGDEDKENALCYHSEKLAVAFGLTCTEEGTPIQV 529
Query: 119 INNL 122
I NL
Sbjct: 530 IKNL 533
>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 928
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 73/125 (58%), Gaps = 11/125 (8%)
Query: 9 VYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLR 57
VYV+ SN +A RW+D +R + K +KK ACSW ++K +HP +
Sbjct: 753 VYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTME 812
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I L+D+ + +++ GYV T +AL D ++EQK++ L HS R A+ + +STP+G T+R
Sbjct: 813 IYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVR 872
Query: 118 LINNL 122
+ NL
Sbjct: 873 IFKNL 877
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS---------- 51
I +N YV+LSN Y++ W + A++R ++ +G+ K P CSW +IK+
Sbjct: 747 IEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCSWMQIKNKMHSFVTGDE 806
Query: 52 -HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
H I L +L+ ++ GYVP T LHD+++EQK++ L YHS + A+ +G + T
Sbjct: 807 EHEQIQNIYATLWELYTLLKATGYVPDTDFVLHDIDEEQKESSLLYHSEKLAVAYGLLVT 866
Query: 111 PDGRTIRLINNL 122
P G I+++ NL
Sbjct: 867 PKGMPIQIMKNL 878
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 73/125 (58%), Gaps = 11/125 (8%)
Query: 9 VYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLR 57
VYV+ SN +A RW+D +R + K +KK ACSW ++K +HP +
Sbjct: 770 VYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTME 829
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I L+D+ + +++ GYV T +AL D ++EQK++ L HS R A+ + +STP+G T+R
Sbjct: 830 IYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVR 889
Query: 118 LINNL 122
+ NL
Sbjct: 890 IFKNL 894
>gi|449494077|ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g34160-like [Cucumis sativus]
Length = 576
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRL-----------RI 58
+V+LSN YAA +RW D R+R ++R + +KKTP S+ EIK Y+ I
Sbjct: 410 FVLLSNVYAARQRWDDVGRVRDAMRRRDVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREI 469
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L ++ R++ GY T LHD+ DE K+N L YHS + A+ FG T +G I++
Sbjct: 470 YAKLDEINLRIKAYGYSADTSNVLHDIGDEDKENALCYHSEKLAVAFGLTCTEEGTPIQV 529
Query: 119 INNL 122
I NL
Sbjct: 530 IKNL 533
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
Y++L++ YAAA RW + A +R ++ +KG++ P CS E+ KSHP I
Sbjct: 635 YIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEI 694
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L ++ GYV T LHDV E K+ LL HS + AI FG +STP G +R+
Sbjct: 695 YLELERLHWSIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRV 754
Query: 119 INNL 122
I NL
Sbjct: 755 IKNL 758
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
++ +N YV+LSN YA A WKD R+R+ V+ + ++K P S E+K
Sbjct: 354 LDASNSGYYVLLSNIYAEAGMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDK 413
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP + I L+ L ERM++ GYVP T LHD+++E+K++ L HS + A+ F +++
Sbjct: 414 SHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNS 473
Query: 111 PDGRTIRLINNL 122
I +I NL
Sbjct: 474 VPRSVIHIIKNL 485
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 72/129 (55%), Gaps = 12/129 (9%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPY 54
N+ YV+LSN Y+ R + A +R V+ + + KTP C+ EI +SHP
Sbjct: 617 NVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQ 676
Query: 55 RLRINEALKDLFERMEQEGY-VPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
I E L+ L +M + GY T ALHDVEDE+K+ +++ HS + AI FG IST G
Sbjct: 677 ATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPG 736
Query: 114 RTIRLINNL 122
IR+I NL
Sbjct: 737 TEIRIIKNL 745
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 72/129 (55%), Gaps = 12/129 (9%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPY 54
N+ YV+LSN Y+ R + A +R V+ + + KTP C+ EI +SHP
Sbjct: 617 NVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQ 676
Query: 55 RLRINEALKDLFERMEQEGY-VPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
I E L+ L +M + GY T ALHDVEDE+K+ +++ HS + AI FG IST G
Sbjct: 677 ATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPG 736
Query: 114 RTIRLINNL 122
IR+I NL
Sbjct: 737 TEIRIIKNL 745
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV L+N YAA +W A++R ++ + K P SW EIKS HP I
Sbjct: 501 YVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSI 560
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
++ L +L +M+ GYVP + ALHDVE+E K+ LL +HS + AI FG + T G IR+
Sbjct: 561 HKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRV 620
Query: 119 INNL 122
NL
Sbjct: 621 FKNL 624
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 73/125 (58%), Gaps = 11/125 (8%)
Query: 9 VYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLR 57
VYV+ SN +A RW+D +R + K +KK ACSW ++K +HP +
Sbjct: 860 VYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTME 919
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I L+D+ + +++ GYV T +AL D ++EQK++ L HS R A+ + +STP+G T+R
Sbjct: 920 IYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVR 979
Query: 118 LINNL 122
+ NL
Sbjct: 980 IFKNL 984
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV L+N YAA +W A++R ++ + K P SW EIKS HP I
Sbjct: 501 YVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSI 560
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
++ L +L +M+ GYVP + ALHDVE+E K+ LL +HS + AI FG + T G IR+
Sbjct: 561 HKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRV 620
Query: 119 INNL 122
NL
Sbjct: 621 FKNL 624
>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YAA RW D LR ++ G++K P S E++ SHP +I
Sbjct: 430 YVLLSNLYAAVGRWADAHVLRKTMATHGVRKNPGHSLVELRNSVYEFVMGDRSHPESDQI 489
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L ++ ER+ +GYVP T L D+E+E+K+ L+YHS R AI F + + G IR+
Sbjct: 490 YQTLAEIAERLRCQGYVPRTSNVLADIEEEEKETALNYHSERLAIAFALLKSLPGSPIRI 549
Query: 119 INNL 122
+ NL
Sbjct: 550 VKNL 553
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 76/132 (57%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRL----- 56
+N ++ YV++SN YAA +W +R S++ +G+KK P CSW EI++ Y
Sbjct: 715 LNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTK 774
Query: 57 ------RINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
+N+ L L M +EGY+ + LHD+++++K+++L HS R AI FG ++T
Sbjct: 775 FFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNT 834
Query: 111 PDGRTIRLINNL 122
G ++++ NL
Sbjct: 835 KPGTPLQVMKNL 846
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YAAA +W++ A R +R +KK P SW ++K SH I
Sbjct: 1445 YVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVI 1504
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
++ + +R+ +EGYVP T AL DVE+E K+ L+YHS + AI +G + TP T+R+
Sbjct: 1505 YNKVEYIMKRIREEGYVPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRV 1564
Query: 119 INNL 122
I NL
Sbjct: 1565 IKNL 1568
>gi|358357242|gb|AEU08461.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 68/116 (58%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRINEALKDLF 66
AAA RW A++R + ++G++K P CS E+ KSHP ++ LK L
Sbjct: 1 AAAGRWDGKAKVRRMMEDRGVRKEPGCSCIEVNNQVHTFVVEDKSHPQIEEVHAELKRLS 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
E+++ GYVP T+ L D+E+EQK+ L +HS R AI FG I TP G IR+I NL
Sbjct: 61 EQLKDAGYVPDTRFVLLDLEEEQKEFSLCHHSERLAIAFGLICTPPGAPIRIIKNL 116
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LS+ YA+ +W A+LR +R+K ++K P SW + K S P+ +I
Sbjct: 577 YVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSADDQSSPFLGQI 636
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L +M +EGYVP LHDVE+ +K +L++HS + AI FG I P G IR+
Sbjct: 637 YAELEKLNYKMIEEGYVPDMSSVLHDVEESEKIKMLNHHSEKLAIAFGLIFVPPGLPIRV 696
Query: 119 INNL 122
I NL
Sbjct: 697 IKNL 700
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/124 (36%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+L+N YA++ W + A++R +++ +KK PA SW E+K SHP I
Sbjct: 711 HVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEI 770
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L +L + M + GY+P LHD++ +K+ LL +HS R A+ F +STP G IR+
Sbjct: 771 YSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRV 830
Query: 119 INNL 122
NL
Sbjct: 831 KKNL 834
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/124 (36%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+L+N YA++ W + A++R +++ +KK PA SW E+K SHP I
Sbjct: 618 HVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEI 677
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L +L + M + GY+P LHD++ +K+ LL +HS R A+ F +STP G IR+
Sbjct: 678 YSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRV 737
Query: 119 INNL 122
NL
Sbjct: 738 KKNL 741
>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
Length = 668
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
++ N YV+LSN YA A WK+ R+RV V+ +G++K P S E+K
Sbjct: 494 LDATNSGYYVLLSNIYAEAGMWKEVERMRVLVKTRGIEKPPGYSSVELKGKTHLFYVGDK 553
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP I L+ L ER+ GYVP T LHD++ E+++++L HS + A+ F +++
Sbjct: 554 SHPQYKEIYAYLEKLLERIHDAGYVPNTGSVLHDLDVEERESMLRIHSEKLAVAFALMNS 613
Query: 111 PDGRTIRLINNL 122
G I +I NL
Sbjct: 614 VQGSVIHVIKNL 625
>gi|358357216|gb|AEU08448.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 69/116 (59%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRINEALKDLF 66
AAA RW D A++R + ++G++K P SW EI KSHP +I L +L
Sbjct: 1 AAAGRWGDAAKVRKVMSDRGVRKKPGRSWIEINNKVHFFVAGDKSHPETPKIYAFLDNLN 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
+++ GYVP T+ LHD+ ++QK+ +L YHS R A +G +STP G IR++ NL
Sbjct: 61 QQIRDAGYVPDTRYVLHDMNEKQKEQVLCYHSERLATAYGLLSTPPGTPIRIMKNL 116
>gi|358357194|gb|AEU08437.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRINEALKDLF 66
AAA RW DTA++R ++ +G++K P S+ EI K HP + I+ LK L
Sbjct: 1 AAAGRWDDTAKVRKMMKVRGVRKEPGRSYVEIGNEVHTFVVDDKLHPQIVEIHAELKRLS 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
+M++ GYVP + LHDVE+EQK+ L++HS + AI FG IST G +R+I NL
Sbjct: 61 GQMKEAGYVPDLRFVLHDVEEEQKEFSLYHHSEKLAIAFGLISTAPGTPLRVIKNL 116
>gi|356574307|ref|XP_003555290.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g43790-like [Glycine max]
Length = 516
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 72/124 (58%), Gaps = 12/124 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA+ RW D R+R+ ++++G+ K P S EI K+HP+ I
Sbjct: 367 YVLLSNMYASIARWNDVKRVRMLMKDRGVDKLPGFSLVEINGAMHEFLTGDKAHPFSKEI 426
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ + ++ R+++ G+ P T E L DVE E K++ L YHS R AI F I++P IR+
Sbjct: 427 HLKIGEINRRLQEYGHKPRTSEVLFDVE-EDKEDFLSYHSERLAIAFALIASPSSMPIRI 485
Query: 119 INNL 122
I NL
Sbjct: 486 IKNL 489
>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
Length = 605
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 68/129 (52%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HP 53
N YV L+N YA A RW D +R+R +++ + KTP SW EIK HP
Sbjct: 434 QNAGAYVQLANIYAVANRWDDVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHP 493
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
I++ L L + M+ GY P ALHDVE+ K +L HS + AI FG IST G
Sbjct: 494 QLDLIHDKLDRLGKLMKAMGYSPDLDFALHDVEESLKSQMLMRHSEKLAIAFGLISTSPG 553
Query: 114 RTIRLINNL 122
T+R+ NL
Sbjct: 554 MTLRIFKNL 562
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++ N+ YV+LSN YA +W+ ++R R +G+KKTP S E+ +
Sbjct: 717 VDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQ 776
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP I E L+ L +M+ GY+P L DVE+++K+++L HS R AI FG IST
Sbjct: 777 SHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIIST 836
Query: 111 PDGRTIRLINNL 122
P IR+ NL
Sbjct: 837 PPKSPIRIFKNL 848
>gi|297597505|ref|NP_001044065.2| Os01g0715700 [Oryza sativa Japonica Group]
gi|255673627|dbj|BAF05979.2| Os01g0715700 [Oryza sativa Japonica Group]
Length = 699
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 74/132 (56%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
I N +V+LSN YA ++ WK + +R ++ KG+KK P CS E+ K
Sbjct: 525 IESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKKVPGCSAIEVGGKVHEFFVGGK 584
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
+HP I L ++ +R+ +GY+ TKE L D+E+E K++ + HS + AI FG ++
Sbjct: 585 THPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDIEEEDKEDAISLHSEKLAIAFGLVAL 644
Query: 111 PDGRTIRLINNL 122
P+ IR++ NL
Sbjct: 645 PEDMEIRIVKNL 656
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++ N+ YV+LSN YA +W+ ++R R +G+KKTP S E+ +
Sbjct: 717 VDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQ 776
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP I E L+ L +M+ GY+P L DVE+++K+++L HS R AI FG IST
Sbjct: 777 SHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIIST 836
Query: 111 PDGRTIRLINNL 122
P IR+ NL
Sbjct: 837 PPKSPIRIFKNL 848
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++ N+ YV+LSN YA +W+ ++R R +G+KKTP S E+ +
Sbjct: 484 VDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQ 543
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP I E L+ L +M+ GY+P L DVE+++K+++L HS R AI FG IST
Sbjct: 544 SHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIIST 603
Query: 111 PDGRTIRLINNL 122
P IR+ NL
Sbjct: 604 PPKSPIRIFKNL 615
>gi|222619165|gb|EEE55297.1| hypothetical protein OsJ_03249 [Oryza sativa Japonica Group]
Length = 706
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 74/132 (56%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
I N +V+LSN YA ++ WK + +R ++ KG+KK P CS E+ K
Sbjct: 532 IESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKKVPGCSAIEVGGKVHEFFVGGK 591
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
+HP I L ++ +R+ +GY+ TKE L D+E+E K++ + HS + AI FG ++
Sbjct: 592 THPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDIEEEDKEDAISLHSEKLAIAFGLVAL 651
Query: 111 PDGRTIRLINNL 122
P+ IR++ NL
Sbjct: 652 PEDMEIRIVKNL 663
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 70/128 (54%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPY 54
N YV+++N YA A +W+ RLR + +G++K P CSW EIK S+P
Sbjct: 701 NTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPE 760
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
I L+ + RM +EGY P TK AL D E+ +K+ L HS + A+ G IS+ G+
Sbjct: 761 TENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGK 820
Query: 115 TIRLINNL 122
IR+ NL
Sbjct: 821 IIRVTKNL 828
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 74/132 (56%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRLRINEA 61
+N ++ YV++SN YA +W +R S++ KG+KK P SW EI+ Y R +
Sbjct: 721 LNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDK 780
Query: 62 -------LKDLFER----MEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
+KDL E M +EGYV + ALHDVE++ K+++L HS R AI FG ++T
Sbjct: 781 SFEQYDKVKDLLEYLVRLMAKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLNT 840
Query: 111 PDGRTIRLINNL 122
G + ++ NL
Sbjct: 841 KPGSPLLVMKNL 852
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 76/132 (57%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRL----- 56
+N ++ YV++SN YAA +W +R S++ +G+KK P CSW EI++ Y
Sbjct: 552 LNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTK 611
Query: 57 ------RINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
+N+ L L M +EGY+ + LHD+++++K+++L HS R AI FG ++T
Sbjct: 612 FFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNT 671
Query: 111 PDGRTIRLINNL 122
G ++++ NL
Sbjct: 672 KPGTPLQVMKNL 683
>gi|218188961|gb|EEC71388.1| hypothetical protein OsI_03510 [Oryza sativa Indica Group]
Length = 706
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 74/132 (56%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
I N +V+LSN YA ++ WK + +R ++ KG+KK P CS E+ K
Sbjct: 532 IESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKKVPGCSAIEVGGKVHEFFVGGK 591
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
+HP I L ++ +R+ +GY+ TKE L D+E+E K++ + HS + AI FG ++
Sbjct: 592 THPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDIEEEDKEDAISLHSEKLAIAFGLVAL 651
Query: 111 PDGRTIRLINNL 122
P+ IR++ NL
Sbjct: 652 PEDMEIRIVKNL 663
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 70/128 (54%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPY 54
N YV+++N YA A +W+ RLR + +G++K P CSW EIK S+P
Sbjct: 550 NTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPE 609
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
I L+ + RM +EGY P TK AL D E+ +K+ L HS + A+ G IS+ G+
Sbjct: 610 TENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGK 669
Query: 115 TIRLINNL 122
IR+ NL
Sbjct: 670 IIRVTKNL 677
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 72/130 (55%), Gaps = 12/130 (9%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK------------SH 52
+N+ Y++LSN YA+A RW D +++R +R K +KK P SW E K SH
Sbjct: 445 DNIGNYLLLSNTYASAGRWDDVSKVRKLLREKNLKKNPGWSWVEAKNGMIHKFVAGDVSH 504
Query: 53 PYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPD 112
P I + L DL ER++ GY P + + D +K+ LL HS + A+ FG +ST
Sbjct: 505 PKINEIKKELNDLLERLKGIGYQPNLSSLPYGINDREKRLLLMAHSEKLALAFGLLSTDV 564
Query: 113 GRTIRLINNL 122
G TI+++ NL
Sbjct: 565 GSTIKIMKNL 574
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YVILSN +A A +W+D A ++ +R++G++K SW E+K ++P I
Sbjct: 648 YVILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHKVYSFSSNDQTNPMITEI 707
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+ L++ M+++GY P T L V+D+ K L YHS R AI F I+TP G IR+
Sbjct: 708 KDELERLYKEMDKQGYKPDTSCTLQQVDDDIKLESLKYHSERLAIAFALINTPPGTPIRV 767
Query: 119 INNL 122
+ NL
Sbjct: 768 MKNL 771
>gi|242076142|ref|XP_002448007.1| hypothetical protein SORBIDRAFT_06g019570 [Sorghum bicolor]
gi|241939190|gb|EES12335.1| hypothetical protein SORBIDRAFT_06g019570 [Sorghum bicolor]
Length = 458
Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 74/125 (59%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-------SHPYRLRINEA- 61
Y+++SN +A +W + +R + +G++K+PACSW EI S Y R +EA
Sbjct: 291 YILVSNVFAEMGKWNNVKEIRTRMAEQGLRKSPACSWIEIGNNIHTFTSRDYCHRDSEAI 350
Query: 62 ---LKDLFERMEQEG-YVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
L ++ E++ +EG YV T+ LHDV +E+K ++LH HS R AI FG IST G IR
Sbjct: 351 HLKLSEITEKLRKEGGYVEDTRFVLHDVSEEEKIDMLHKHSERLAIAFGLISTRPGMPIR 410
Query: 118 LINNL 122
+ NL
Sbjct: 411 IAKNL 415
>gi|297804490|ref|XP_002870129.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
gi|297315965|gb|EFH46388.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
Length = 853
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 72/128 (56%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPY 54
N YV L+N YA+ W+D AR+R ++ + K P SW EI++ HP
Sbjct: 469 NAAGYVQLANIYASKNLWEDVARVRKRMKESNVVKVPGYSWIEIRNKIHHFRSSDRIHPE 528
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
I++ LK+L +M+ GY P + ALH+VE+EQK+ LL +HS + A+ FG I P G
Sbjct: 529 LDSIHKKLKELERKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGS 588
Query: 115 TIRLINNL 122
I++ NL
Sbjct: 589 PIQVFKNL 596
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YVILSN YA+A RW+D +R + K + K P SW E+ +SHP R +
Sbjct: 420 YVILSNLYASAGRWEDVRNVRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEV 479
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+++L + ++ GYVP L+DV++EQK+ +L HS + A+ FG IST +G +R+
Sbjct: 480 FLKVRELLVKFKESGYVPDQSCVLYDVDEEQKEKILLGHSEKLALAFGLISTSEGVPLRV 539
Query: 119 INNL 122
I NL
Sbjct: 540 IKNL 543
>gi|308080542|ref|NP_001183145.1| uncharacterized protein LOC100501514 [Zea mays]
gi|238009628|gb|ACR35849.1| unknown [Zea mays]
Length = 332
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 71/131 (54%), Gaps = 11/131 (8%)
Query: 3 NLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KS 51
L N YV+LSN YAAA +W++ R+R +R G++K P CS E+ +S
Sbjct: 159 GLANSGTYVLLSNMYAAAGKWREVGRVRSMMRASGVQKEPGCSAVEVGRRVVEFVAGDRS 218
Query: 52 HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTP 111
HP I L+++ G+VP T+ LHD++D K+ L HS + A+ FG ISTP
Sbjct: 219 HPRSAEIYAKLEEVNSIARARGHVPHTELVLHDLDDAAKERALAVHSEKLALAFGLISTP 278
Query: 112 DGRTIRLINNL 122
I+++ NL
Sbjct: 279 PRTGIKIVKNL 289
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 69/128 (53%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPY 54
N +YV+LSN YA AR+W+ +R +R +GMKK P S E+ SHP
Sbjct: 651 NSGIYVMLSNIYAEARKWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASDDSHPS 710
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
I + L++L +E EGY+P T L DV + K LL HS R AI FG +STP G
Sbjct: 711 WADIYQLLENLRLEVEAEGYIPDTSCVLRDVNEPMKVKLLWGHSERLAIAFGLLSTPCGS 770
Query: 115 TIRLINNL 122
I++ NL
Sbjct: 771 LIKITKNL 778
>gi|357484833|ref|XP_003612704.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514039|gb|AES95662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 572
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 74/133 (55%), Gaps = 11/133 (8%)
Query: 1 MINLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRLR--- 57
M+N NN Y++L+N YA A++W D A++R + + + +TP S E K Y+
Sbjct: 397 MLNQNNSGDYLVLANMYAKAQKWDDVAKIRTKLAERNLVQTPGFSLIEAKRKVYKFVSQD 456
Query: 58 --------INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIS 109
I E + + +++ EGY+P T + L DV+DE+KK L +HS + AI FG I
Sbjct: 457 KSIPQWNIIYEMIHQMEWQLKFEGYIPDTSQVLLDVDDEEKKERLKFHSQKLAIAFGLIH 516
Query: 110 TPDGRTIRLINNL 122
T +G +R+ NL
Sbjct: 517 TSEGSPLRITRNL 529
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 73/124 (58%), Gaps = 12/124 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+L+N YA+ W A++R ++ +KG+ KTP CSW E++ +HP +I
Sbjct: 653 HVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESKKI 712
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L + ++ GYVP +++HDVE++ KK LL HS R AI FG ++T G T+ +
Sbjct: 713 YAFLETLGDEIKAAGYVP-DPDSIHDVEEDVKKQLLSSHSERLAIAFGLLNTSPGTTLHI 771
Query: 119 INNL 122
NL
Sbjct: 772 RKNL 775
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI------------KSHPYRLR 57
+V+LSN Y+A RW D A++R + + +G +K+P CSW EI +SHP +
Sbjct: 632 FVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHPQLTQ 691
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I+ L +L M++ GY + DVE+E+K+ +L YHS + AI FG +S + I
Sbjct: 692 ISNKLDELLVEMKRLGYQAESSYVFQDVEEEEKERVLLYHSEKLAIAFGILSLSPDKHII 751
Query: 118 LINNL 122
+ NL
Sbjct: 752 VTKNL 756
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 72/125 (57%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
Y+ILSN A A RW+D +R + +G+ K P CS E+ + H ++
Sbjct: 428 YIILSNLCARAGRWEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKL 487
Query: 59 NEALKDLFERMEQEGYVPTTKEALH-DVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
++AL +L + ++ GYVP T H D+EDE+K+ L YHS + AI FG ++TP G TIR
Sbjct: 488 HQALDELVKELKLVGYVPNTSLVFHADMEDEEKEVTLRYHSEKLAITFGLLNTPPGTTIR 547
Query: 118 LINNL 122
++ NL
Sbjct: 548 VVKNL 552
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 71/132 (53%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
I+ N YV+L + +AA +W + A+LR +R++ +KK P CSW + K
Sbjct: 571 IDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQ 630
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP I E L+ L +M +EGY P LHDV D K +++ +HS + AI FG I
Sbjct: 631 SHPCSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLIFV 690
Query: 111 PDGRTIRLINNL 122
P IR++ NL
Sbjct: 691 PQEMPIRIVKNL 702
>gi|358357212|gb|AEU08446.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 69/116 (59%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRINEALKDLF 66
AAA RW D ++R + ++G++K P S E+ + HP ++I++ L+ L
Sbjct: 1 AAAGRWDDKVKVRKMMEDRGIRKEPGRSCIEVDNLVHTFVVEDELHPQIVKIHDELRRLQ 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
ME+ GYVP T+ LHDVE EQK+ L +HS + AI FG ISTP G IR+I NL
Sbjct: 61 GLMEEAGYVPDTRFVLHDVEGEQKEFSLCHHSEKLAIAFGLISTPPGTPIRIIKNL 116
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 69/129 (53%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHP 53
N YV+L + +A+ W + A LR +R++ +KK P CSW + K SHP
Sbjct: 583 QNPASYVLLCSMHASKGEWSEVALLRRGMRDRQVKKEPGCSWIKYKNRVHIFSADDQSHP 642
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+ I E L+ L +M +EGY P LHDV D +K ++L HS + AI FG I P+
Sbjct: 643 FSGTIYEKLQWLNSKMAEEGYKPDVSSVLHDVADAEKVHMLSNHSEKLAIAFGLIFVPEE 702
Query: 114 RTIRLINNL 122
IR++ NL
Sbjct: 703 MPIRVVKNL 711
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 72/124 (58%), Gaps = 12/124 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+L+N YA+A W AR+R ++ KG++KTP CS E++ +HP RI
Sbjct: 651 HVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKRI 710
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L + M+ GYVP T ++HDVE++ K+ LL HS R AI FG ++T G I +
Sbjct: 711 YAYLETLGDEMKAAGYVPDTN-SIHDVEEDVKEQLLSSHSERLAIAFGLLNTRHGTAIHI 769
Query: 119 INNL 122
NL
Sbjct: 770 RKNL 773
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+L+N YA+A W + A++R +++ +KK PA SW E+K SHP I
Sbjct: 713 HVLLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPRARDI 772
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L++L + M + GYVP + LHDV+ +K+ LL +HS R A+ F ISTP G IR+
Sbjct: 773 YAKLEELGDLMSKAGYVPNLEVDLHDVDKSEKELLLSHHSERLAVAFALISTPAGAPIRV 832
Query: 119 INNL 122
NL
Sbjct: 833 KKNL 836
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 74/124 (59%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV L+N YAA +RW AR+R S+++ + KTP SW E+KS HP I
Sbjct: 403 YVQLANVYAATKRWDHVARVRKSMKSCKVVKTPGYSWIEVKSMAHQFRSGDKFHPELASI 462
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ LK+L ++M+ GYVP + ALHDV +EQK+ LL +HS + AI +G I P G IR+
Sbjct: 463 HGKLKELEKKMKLAGYVPDLEFALHDVGEEQKEQLLLWHSEKLAIAYGLIKLPPGTPIRV 522
Query: 119 INNL 122
NL
Sbjct: 523 FKNL 526
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-------------KSHPYRL 56
YV++SN YA A RW+D AR+R ++++G+KKT W+ I ++HP
Sbjct: 348 YVVISNIYAEAERWEDAARVRKLMKDRGVKKTSG--WSSITVNGVVHEFVAGDQTHPQAE 405
Query: 57 RINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTI 116
I + L +M++ GY P T L D+E+++K+ L+ HS + A+VFG ++TP+G I
Sbjct: 406 DICKIWDKLLVKMKRRGYAPKTSVVLLDMEEKEKEKFLYRHSEKLAVVFGLMTTPEGTPI 465
Query: 117 RLINNL 122
R++ NL
Sbjct: 466 RIMKNL 471
>gi|358357226|gb|AEU08453.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRINEALKDLF 66
A A RW A++ + +G+K+ P CSW E++ SHP I L+ L
Sbjct: 1 ATAGRWDAVAKVGKVMEERGVKREPGCSWIEVRKRVHSFIVDDRSHPQTEEIYAELEKLT 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
M++EGY+P T+ LHDV+ + K+ L +HS + AI FG ISTP G IR++ NL
Sbjct: 61 SHMKEEGYIPDTRFILHDVDQQTKEQALCHHSEKLAICFGLISTPPGTPIRIVKNL 116
>gi|326528959|dbj|BAJ97501.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 514
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 46/124 (37%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWT-----------EIKSHPYRLRI 58
YV+LSN Y+ A RW D AR+R S++ +G+ K P CSW E + HP +
Sbjct: 348 YVMLSNLYSRAGRWGDVARVRTSMKARGITKEPGCSWVAANGVTHLFYVEDRRHPRAAEV 407
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
++++ ER+ +GYV T AL D E ++ L +HS R A+ FG ++ P G IR+
Sbjct: 408 YRKVEEMTERIRGQGYVADTAWALQDEGPEGREKGLAHHSERLAVAFGLLAVPAGAPIRV 467
Query: 119 INNL 122
NL
Sbjct: 468 FKNL 471
>gi|297607519|ref|NP_001060096.2| Os07g0578800 [Oryza sativa Japonica Group]
gi|255677918|dbj|BAF22010.2| Os07g0578800 [Oryza sativa Japonica Group]
Length = 967
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 64/97 (65%), Gaps = 11/97 (11%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPY 54
+M +VILSN Y+A+ RW + A+LR S+R KGMKK PACSW E+ KSHP+
Sbjct: 790 SMGSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPW 849
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKK 91
RI +AL E+M ++GYVP ++ L D+E+EQK+
Sbjct: 850 YDRIIDALNVYSEQMIRQGYVPNMEDVLQDIEEEQKR 886
>gi|215713517|dbj|BAG94654.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635568|gb|EEE65700.1| hypothetical protein OsJ_21333 [Oryza sativa Japonica Group]
Length = 382
Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 69/123 (56%), Gaps = 11/123 (8%)
Query: 11 VILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRIN 59
++LSN YA R+W D + +R++G+KK P SW E+ SHP I
Sbjct: 217 ILLSNTYADLRQWADAEKSWKMMRDRGVKKDPGRSWIELGKQVHVFIAGDLSHPCSESII 276
Query: 60 EALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLI 119
+ L LF R+ GY P T+ L D+ EQK++LL YHS + AI FG ++ +G+ IR++
Sbjct: 277 QELSRLFSRVTNLGYTPQTEFVLQDLATEQKEDLLKYHSEKLAIAFGTMNAMEGKPIRIM 336
Query: 120 NNL 122
NL
Sbjct: 337 KNL 339
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV LSN Y+ RW++ ++R +++ + ++K ACSW EI KSH +I
Sbjct: 522 YVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKI 581
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L +L ++ G+VPTT+ L D+E+E+K++ L YHS + A+ FG I++P IR+
Sbjct: 582 YAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRV 641
Query: 119 INNL 122
+ NL
Sbjct: 642 VKNL 645
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 12/124 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA+ +W+D AR R ++R +KK CSW +K SHP + I
Sbjct: 616 YVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLI 675
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
LK+L +++ GYVP K AL+D+E E K+ LL YHS + A+ F ++ G IR+
Sbjct: 676 YAKLKELDKKIRDAGYVPQIKFALYDLEPENKEELLSYHSEKLAVAF-VLTRNSGLPIRI 734
Query: 119 INNL 122
+ NL
Sbjct: 735 MKNL 738
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 76/132 (57%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++ +N Y++LS+ YA A RWKD R+R+ ++N+G+ K P S E+ +
Sbjct: 485 LDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDE 544
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
HP R +I E L +L ++ + GYV T HDV++E+K+ L HS + AI FG ++T
Sbjct: 545 EHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNT 604
Query: 111 PDGRTIRLINNL 122
G T+ ++ NL
Sbjct: 605 VPGSTVNVVKNL 616
>gi|358357240|gb|AEU08460.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 67/116 (57%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRINEALKDLF 66
AAA RW D AR+R + ++G++K P S+ E+ KSHP I+ L L
Sbjct: 1 AAAGRWDDAARVRKMMEDRGVRKEPGFSYIEVNHQVHTFVVEDKSHPQIEEIHAELNRLS 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
M++ GYVP T LHDVE+EQK+ L +HS + AI FG ISTP G I +I NL
Sbjct: 61 GWMKEAGYVPDTSYVLHDVEEEQKELSLCWHSEKLAIAFGLISTPPGAPICIIKNL 116
>gi|115468046|ref|NP_001057622.1| Os06g0472300 [Oryza sativa Japonica Group]
gi|113595662|dbj|BAF19536.1| Os06g0472300, partial [Oryza sativa Japonica Group]
Length = 397
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 69/123 (56%), Gaps = 11/123 (8%)
Query: 11 VILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRIN 59
++LSN YA R+W D + +R++G+KK P SW E+ SHP I
Sbjct: 232 ILLSNTYADLRQWADAEKSWKMMRDRGVKKDPGRSWIELGKQVHVFIAGDLSHPCSESII 291
Query: 60 EALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLI 119
+ L LF R+ GY P T+ L D+ EQK++LL YHS + AI FG ++ +G+ IR++
Sbjct: 292 QELSRLFSRVTNLGYTPQTEFVLQDLATEQKEDLLKYHSEKLAIAFGTMNAMEGKPIRIM 351
Query: 120 NNL 122
NL
Sbjct: 352 KNL 354
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 76/132 (57%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++ +N Y++LS+ YA A RWKD R+R+ ++N+G+ K P S E+ +
Sbjct: 485 LDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDE 544
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
HP R +I E L +L ++ + GYV T HDV++E+K+ L HS + AI FG ++T
Sbjct: 545 EHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNT 604
Query: 111 PDGRTIRLINNL 122
G T+ ++ NL
Sbjct: 605 VPGSTVNVVKNL 616
>gi|297824049|ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325746|gb|EFH56166.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 565
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 78/132 (59%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRLRINE- 60
I+ N+ YV+L+N +A+A+RW+D + +R S+R+K +KK SW E K ++ ++ +
Sbjct: 391 IDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDR 450
Query: 61 ----------ALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
LK+L M+ +GY P T LHD+++E+K++ L HS + A+ F +
Sbjct: 451 SQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMIL 510
Query: 111 PDGRTIRLINNL 122
P+G IR+I NL
Sbjct: 511 PEGAPIRIIKNL 522
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 75/129 (58%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHP 53
+N Y++LS+ YA + RWKD R+R++++N+G+ K P S E+ + HP
Sbjct: 488 SNCGYYMLLSHIYADSGRWKDVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHP 547
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
R +I E L +L ++ + GYV T HDV++E+K+ L HS + AI FG ++T G
Sbjct: 548 QREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPG 607
Query: 114 RTIRLINNL 122
T+ ++ NL
Sbjct: 608 STVNVVKNL 616
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 75/125 (60%), Gaps = 11/125 (8%)
Query: 9 VYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLR 57
++V+LSN YA+A +W D AR+R+ ++ KG++K P S E++ SH
Sbjct: 669 IHVLLSNIYASAGKWTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTH 728
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I L+++ R+ + GYVP T L DV++++K++LL HS + A+ +G I+T G IR
Sbjct: 729 IGLMLEEINCRLSEAGYVPDTTNVLLDVDEQEKEHLLSRHSEKLAMAYGLITTGQGIPIR 788
Query: 118 LINNL 122
++ NL
Sbjct: 789 VVKNL 793
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV LSN Y+ RW++ ++R +++ + ++K ACSW EI KSH +I
Sbjct: 522 YVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKI 581
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L +L ++ G+VPTT+ L D+E+E+K++ L YHS + A+ FG I++P IR+
Sbjct: 582 YAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRV 641
Query: 119 INNL 122
+ NL
Sbjct: 642 VKNL 645
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 69/129 (53%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHP 53
N+ YV+LSN YA A W+ R S+R+K MKK P S EI K HP
Sbjct: 526 NDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSIEINQEIYTFMAGEKDHP 585
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+I LK L ++++ GYVP T L DV D+ KK++L++HS + AI FG + T
Sbjct: 586 QYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPE 645
Query: 114 RTIRLINNL 122
IR+ NL
Sbjct: 646 TIIRITKNL 654
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 70/128 (54%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPY 54
N YV+LSN Y++ + W+ ++R + + +KK P CS E+ SHP
Sbjct: 410 NGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQ 469
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
I E L D+ R++ GYVP E L D+++++K+N L HS + AI FG +ST G
Sbjct: 470 SSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGT 529
Query: 115 TIRLINNL 122
IR++ NL
Sbjct: 530 PIRVVKNL 537
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA+ +RW D ++R + G+KK P S E+ KSHP I
Sbjct: 429 YVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAI 488
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
LK++ R+ EGYVP DVE+E+K+N + YHS + AI F ISTP+ I +
Sbjct: 489 YAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITV 548
Query: 119 INNL 122
+ NL
Sbjct: 549 VKNL 552
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 70/128 (54%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPY 54
N YV+LSN Y++ + W+ ++R + + +KK P CS E+ SHP
Sbjct: 541 NGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQ 600
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
I E L D+ R++ GYVP E L D+++++K+N L HS + AI FG +ST G
Sbjct: 601 SSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGT 660
Query: 115 TIRLINNL 122
IR++ NL
Sbjct: 661 PIRVVKNL 668
>gi|115458888|ref|NP_001053044.1| Os04g0469400 [Oryza sativa Japonica Group]
gi|113564615|dbj|BAF14958.1| Os04g0469400, partial [Oryza sativa Japonica Group]
Length = 401
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 72/125 (57%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS--HPYRLR---------I 58
YV++SN +A +W + +R + +G++K PACSW EI + H + R I
Sbjct: 234 YVLVSNVFAEMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAI 293
Query: 59 NEALKDLFERMEQEG-YVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
+ L ++ E++ +EG YV T LHDV +E+K +LLH HS R AI FG IST G +R
Sbjct: 294 HLKLAEITEKLRREGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLR 353
Query: 118 LINNL 122
+ NL
Sbjct: 354 IAKNL 358
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 69/123 (56%), Gaps = 11/123 (8%)
Query: 11 VILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRIN 59
V+LSN YA R+W D + ++R++GMKK P SW E++ SHP I
Sbjct: 485 VLLSNTYADLRQWTDAEKSWKAMRDRGMKKEPGRSWIELEKHVHVFIAGDLSHPCSDTIV 544
Query: 60 EALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLI 119
+ L L R+ GYVP T+ L D+ EQK++LL YHS + AI FG + G+ IR++
Sbjct: 545 QELNRLIGRISALGYVPQTEFVLQDLAIEQKEDLLKYHSEKMAIAFGTMHAVGGKPIRIM 604
Query: 120 NNL 122
NL
Sbjct: 605 KNL 607
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA W+ R+R ++ KGMKK P + E+ KSH I
Sbjct: 321 YVLLSNIYAKMSDWEKKTRIREAMDMKGMKKIPGSTMIELDNEIYEFVAGDKSHAQSKEI 380
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E + ++ + M++ GY+PTT E L D++DE K++ L+ HS + AI F ++TP G IR+
Sbjct: 381 YEMVDEMGKEMKRAGYMPTTTEVLLDIDDEDKEDTLNRHSEKLAIAFALLNTPPGTLIRI 440
Query: 119 INNL 122
+ NL
Sbjct: 441 VKNL 444
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YAAA +W++ A R +R +KK P SW ++K SH I
Sbjct: 1416 YVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVI 1475
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
++ + +R+ +EGY+P T AL DVE+E K+ L+YHS + AI +G + TP T+R+
Sbjct: 1476 YNKVEYIMKRIREEGYLPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRV 1535
Query: 119 INNL 122
I NL
Sbjct: 1536 IKNL 1539
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 73/125 (58%), Gaps = 11/125 (8%)
Query: 9 VYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLR 57
V+V+ SN +A RW+D +R + K +KK ACSW ++K +HP +
Sbjct: 871 VFVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTME 930
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I L+D+ + +++ GYV T +AL D ++EQK++ L HS R A+ + +STP+G T+R
Sbjct: 931 IYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVR 990
Query: 118 LINNL 122
+ NL
Sbjct: 991 IFKNL 995
>gi|3402709|gb|AAD12003.1| hypothetical protein [Arabidopsis thaliana]
Length = 563
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 78/132 (59%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRLRINE- 60
I+ N+ YV+L+N +A+A+RW+D + +R S+R+K +KK SW E K ++ ++ +
Sbjct: 389 IDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDR 448
Query: 61 ----------ALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
LK+L M+ +GY P T LHD+++E+K++ L HS + A+ F +
Sbjct: 449 SQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMIL 508
Query: 111 PDGRTIRLINNL 122
P+G IR+I NL
Sbjct: 509 PEGAPIRIIKNL 520
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 13/125 (10%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI------------KSHPYRLR 57
YV+LS+ YA RW+D LR + N+ + K P CSW E+ KSHP +
Sbjct: 541 YVLLSHMYATKGRWRDVEVLRKKI-NRRVIKFPGCSWIEVEKKVHMFTGGDSKSHPEQHM 599
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I + L+ L + + GY P LHDV++E+K + L YHS R A+ +G + P+G IR
Sbjct: 600 ITQMLEKLSGFLREAGYCPDGSFVLHDVDEEEKTHSLGYHSERLAVAYGLLKVPEGMPIR 659
Query: 118 LINNL 122
++ NL
Sbjct: 660 VMKNL 664
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA+ +RW D ++R + G+KK P S E+ KSHP I
Sbjct: 296 YVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAI 355
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
LK++ R+ EGYVP DVE+E+K+N + YHS + AI F ISTP+ I +
Sbjct: 356 YAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITV 415
Query: 119 INNL 122
+ NL
Sbjct: 416 VKNL 419
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS---------- 51
++ +N YV+LSN YA A RW D R+R+ ++N+ + K P S E+K
Sbjct: 1551 LDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDK 1610
Query: 52 -HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
HP+ I + L+ L +++ GYVP LHDV++E+K+ +L HS + A+ FG +++
Sbjct: 1611 EHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNS 1670
Query: 111 PDGRTIRLINNL 122
G TI +I NL
Sbjct: 1671 APGTTINIIKNL 1682
>gi|30688521|ref|NP_850342.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|18491267|gb|AAL69458.1| At2g41080/T3K9.15 [Arabidopsis thaliana]
gi|330254831|gb|AEC09925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 565
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 78/132 (59%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRLRINE- 60
I+ N+ YV+L+N +A+A+RW+D + +R S+R+K +KK SW E K ++ ++ +
Sbjct: 391 IDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDR 450
Query: 61 ----------ALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
LK+L M+ +GY P T LHD+++E+K++ L HS + A+ F +
Sbjct: 451 SQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMIL 510
Query: 111 PDGRTIRLINNL 122
P+G IR+I NL
Sbjct: 511 PEGAPIRIIKNL 522
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 71/128 (55%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPY 54
N+ YV+LSN YA W+ +R R++G+KKTP S E+ ++HP
Sbjct: 646 NVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPK 705
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
I L++L +M+ GYVP L DVED++K+N+L HS R A+ FG ISTP
Sbjct: 706 CEEIYSELRNLTAKMKSIGYVPDYNFVLQDVEDDEKENILTSHSERLAMAFGIISTPPKT 765
Query: 115 TIRLINNL 122
T+++ NL
Sbjct: 766 TLQIFKNL 773
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 71/129 (55%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHP 53
N YV+LSN YA RW+D +R + G+KK P CS E+ SHP
Sbjct: 370 TNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSLIEVGGVLHEFFVGDDSHP 429
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+I+ L+++ ER++ EGYV TKE L D+++E K+ L HS + A+ +G + T G
Sbjct: 430 ETRQIHMMLEEILERLKVEGYVGNTKEVLLDLDEEGKELALSLHSEKLALAYGFLKTSPG 489
Query: 114 RTIRLINNL 122
IR++ NL
Sbjct: 490 TPIRIVKNL 498
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 73/129 (56%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHP 53
+N YV+L+N YA A +W++ +LR + +G+KK+P CSW E++ +HP
Sbjct: 1056 DNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHP 1115
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
I L +L +M+ EG+ P + AL + D +K+ L HS + A+ FG ++ P G
Sbjct: 1116 QAKSIFSLLNNLRIKMKNEGHSPKMRYALINAGDMEKEVALCGHSEKLAMAFGILNLPSG 1175
Query: 114 RTIRLINNL 122
RTIR+ NL
Sbjct: 1176 RTIRVAKNL 1184
>gi|222629025|gb|EEE61157.1| hypothetical protein OsJ_15124 [Oryza sativa Japonica Group]
Length = 383
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 72/125 (57%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS--HPYRLR---------I 58
YV++SN +A +W + +R + +G++K PACSW EI + H + R I
Sbjct: 216 YVLVSNVFAEMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAI 275
Query: 59 NEALKDLFERMEQEG-YVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
+ L ++ E++ +EG YV T LHDV +E+K +LLH HS R AI FG IST G +R
Sbjct: 276 HLKLAEITEKLRREGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLR 335
Query: 118 LINNL 122
+ NL
Sbjct: 336 IAKNL 340
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS---------- 51
++ +N YV+LSN YA A RW D R+R+ ++N+ + K P S E+K
Sbjct: 2424 LDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDK 2483
Query: 52 -HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
HP+ I + L+ L +++ GYVP LHDV++E+K+ +L HS + A+ FG +++
Sbjct: 2484 EHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNS 2543
Query: 111 PDGRTIRLINNL 122
G TI +I NL
Sbjct: 2544 APGTTINIIKNL 2555
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 74/131 (56%), Gaps = 11/131 (8%)
Query: 3 NLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------S 51
L N +Y++LSN YAA W++ AR+R ++ G++K P CS E+ S
Sbjct: 462 GLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIEVGRKVYEFVAGDMS 521
Query: 52 HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTP 111
HP I L+ + ++++G+VP T+ LHD+++ K+ L HS + A+ FG IST
Sbjct: 522 HPRTDEIYAMLEKMNGIVKEQGHVPQTELVLHDLDEVTKEKALAVHSEKLAVAFGLISTA 581
Query: 112 DGRTIRLINNL 122
G TI+++ NL
Sbjct: 582 PGETIKIVKNL 592
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA+ +RW D ++R + G+KK P S E+ KSHP I
Sbjct: 429 YVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAI 488
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
LK++ R+ EGYVP DVE+E+K+N + YHS + AI F ISTP+ I +
Sbjct: 489 YAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITV 548
Query: 119 INNL 122
+ NL
Sbjct: 549 VKNL 552
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 74/131 (56%), Gaps = 11/131 (8%)
Query: 3 NLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------S 51
L N +Y++LSN YAA W++ AR+R ++ G++K P CS E+ S
Sbjct: 461 GLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIEVGRKVYEFVAGDMS 520
Query: 52 HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTP 111
HP I L+ + ++++G+VP T+ LHD+++ K+ L HS + A+ FG IST
Sbjct: 521 HPRTDEIYAMLEKMNGIVKEQGHVPQTELVLHDLDEVTKEKALAVHSEKLAVAFGLISTA 580
Query: 112 DGRTIRLINNL 122
G TI+++ NL
Sbjct: 581 PGETIKIVKNL 591
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 14/131 (10%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPY 54
N YV+LSN YA+A RW++ A ++ +R +G+KK P CSW EI SHP
Sbjct: 549 NAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPM 608
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEAL---HDVEDEQKKNLLHYHSGRFAIVFGAISTP 111
I+ + ++ +M+Q GYVP + AL +VE ++K+ L YHS + A+ FG IST
Sbjct: 609 IKEIHVYMGEILRKMKQAGYVPDIRWALVKDEEVEPDEKERRLLYHSEKLAVAFGLISTE 668
Query: 112 DGRTIRLINNL 122
+ I ++ NL
Sbjct: 669 EWVPILVVKNL 679
>gi|3377941|emb|CAA17526.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1331
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA+ +RW D ++R + G+KK P S E+ KSHP I
Sbjct: 212 YVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAI 271
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
LK++ R+ EGYVP DVE+E+K+N + YHS + AI F ISTP+ I +
Sbjct: 272 YAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITV 331
Query: 119 INNL 122
+ NL
Sbjct: 332 VKNL 335
>gi|190612741|gb|ACE80748.1| pentatricopeptide repeat protein [Lepidogyna hodgsoniae]
Length = 143
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 72/129 (55%), Gaps = 11/129 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++ N YV+LSN YAAA +W +A ++ +G+KK P C+W + +
Sbjct: 15 LDPQNASGYVMLSNIYAAAGKWDRSADIQQLRMERGVKKQPGCTWIAVDDLVHSFIVDDE 74
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
+HP + I+ L+ L + M++ GYVP T LHDV++E+K L +HS + AI +G I T
Sbjct: 75 THPQIVEIHTELERLSQEMKESGYVPDTGFVLHDVDEEEKLGRLCHHSEKLAIGYGLIXT 134
Query: 111 PDGRTIRLI 119
P G I +
Sbjct: 135 PPGTPIHIF 143
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 72/125 (57%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS--HPYRLR---------I 58
YV++SN +A +W + +R + +G++K PACSW EI + H + R I
Sbjct: 772 YVLVSNVFAEMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAI 831
Query: 59 NEALKDLFERMEQEG-YVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
+ L ++ E++ +EG YV T LHDV +E+K +LLH HS R AI FG IST G +R
Sbjct: 832 HLKLAEITEKLRREGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLR 891
Query: 118 LINNL 122
+ NL
Sbjct: 892 IAKNL 896
>gi|190612859|gb|ACE80807.1| pentatricopeptide repeat protein [Pinus nigra]
Length = 152
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 69/116 (59%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRINEALKDLF 66
AA+ RW + A++R +++KG+ K+P CSW E K S+P +I L+ L
Sbjct: 1 AASGRWDNVAKMRTMLKDKGLTKSPGCSWVENKNKFHVFTVGDRSNPQSEKIYALLECLS 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
++MEQ GYVP T LHDVE+E+K+++L HS + AI F IST +I + NL
Sbjct: 61 QQMEQAGYVPDTGFVLHDVEEEEKEHMLSTHSEKLAIAFALISTYPRTSIHITKNL 116
>gi|218546768|sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
Length = 650
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 78/132 (59%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRLRINE- 60
I+ N+ YV+L+N +A+A+RW+D + +R S+R+K +KK SW E K ++ ++ +
Sbjct: 476 IDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDR 535
Query: 61 ----------ALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
LK+L M+ +GY P T LHD+++E+K++ L HS + A+ F +
Sbjct: 536 SQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMIL 595
Query: 111 PDGRTIRLINNL 122
P+G IR+I NL
Sbjct: 596 PEGAPIRIIKNL 607
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 11/133 (8%)
Query: 1 MINLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI----------- 49
M L + YV +SN YAAA W+ ++ ++R +G+KK PA SW E+
Sbjct: 650 MEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSND 709
Query: 50 KSHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIS 109
++HP I + +L +E+EGY P T + DV+++ K L YHS R A+ F IS
Sbjct: 710 QTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALIS 769
Query: 110 TPDGRTIRLINNL 122
TP+G I ++ NL
Sbjct: 770 TPEGCPIVVMKNL 782
>gi|358357218|gb|AEU08449.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 67/116 (57%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRINEALKDLF 66
AAA RW D A++R + ++G++K P S EI KSHP + I+ LK L
Sbjct: 1 AAAGRWDDKAKVRKMMEDRGVRKEPGRSCIEINNQVHTFVVEDKSHPQIVEIHAELKRLS 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
M++ GYVP T LHDVE+EQK+ L YHS + AI FG IS P G I +I NL
Sbjct: 61 GWMKEAGYVPDTGFVLHDVEEEQKEFSLCYHSEKLAIGFGLISLPPGMPIHIIKNL 116
>gi|357126224|ref|XP_003564788.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Brachypodium distachyon]
Length = 515
Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWT-----------EIKSHPYRLRI 58
Y++LSN Y+ RRW D AR+R ++++G+ K P CSW E + HP I
Sbjct: 349 YIMLSNLYSRERRWSDVARIRTLMKSRGIAKEPGCSWVVASGVTHLFYVEDRGHPRTDEI 408
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
++++ E++ EG+V T AL D E ++ L +HS R A+ FG ++ P G +R+
Sbjct: 409 YRKVEEMMEKVRAEGFVADTDWALQDEAPEGREKGLAHHSERLAVAFGLLALPAGAPVRV 468
Query: 119 INNL 122
NL
Sbjct: 469 FKNL 472
>gi|190612745|gb|ACE80750.1| pentatricopeptide repeat protein [Lepidogyna hodgsoniae]
Length = 143
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 71/128 (55%), Gaps = 11/128 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++ N YV+LSN YAAA +W +A+++ +G+KK P +W E+ K
Sbjct: 15 LDPGNAGGYVLLSNIYAAAGKWDSSAKVQKLRLKRGVKKEPGRTWIEVNNEVHSFTVDDK 74
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
HP I L L +ME+ GY P T+ LHDVE+E+K N L HS + AI +G IST
Sbjct: 75 EHPQINVILAELSVLAVQMEEAGYTPDTRYVLHDVEEEEKANHLLNHSEKLAIAYGLIST 134
Query: 111 PDGRTIRL 118
P G +R+
Sbjct: 135 PPGTPLRI 142
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 73/125 (58%), Gaps = 13/125 (10%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA+ +W+ ++R ++ +G + P CSW EI K HP I
Sbjct: 497 YVLLSNLYASMGQWESVTKVRKAMSQRGSEGCPGCSWIEIDGVVHEFLAADKLHPRISEI 556
Query: 59 NEALKDLFERMEQEG-YVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
N+ L ++ R+ EG YVP+TK+ L D+ +E K+ + +HS + A+ FG +ST +G TIR
Sbjct: 557 NKKLNEVLRRISIEGGYVPSTKQVLFDLNEEDKEQAVSWHSEKLAVAFGLLSTQEG-TIR 615
Query: 118 LINNL 122
+ NL
Sbjct: 616 ITKNL 620
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HP 53
N++ Y +LSN YA +RW ++R +R+K +KK P SW EI + HP
Sbjct: 536 NDVGTYTLLSNIYAKEKRWDGVVKVRKLMRDKKIKKEPGVSWIEIGNVTHIFTSEDNKHP 595
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+ + +K+L ++ GY P LHDVEDEQK+ L YHS + AI +G + P
Sbjct: 596 DYGQTYQKVKELLAMIKPLGYTPDIGAVLHDVEDEQKEYYLSYHSEKLAIAYGLLKLPSE 655
Query: 114 RTIRLINNL 122
+I +I NL
Sbjct: 656 ASILVIKNL 664
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-------------KSHPYRL 56
YV+LSN YA A RW+DTAR+R ++++ +KKTP W+ I +SHP
Sbjct: 433 YVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPG--WSSITVDGVVHEFVAGEESHPDTE 490
Query: 57 RINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTI 116
+I + ++L E M +GYVP T L D+E+ +K + HS + A+VFG ++TP I
Sbjct: 491 QIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPI 550
Query: 117 RLINNL 122
R++ NL
Sbjct: 551 RIMKNL 556
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTE-----------IKSHPYRLRI 58
YVILSN YA+A RW+D +R + K + K P SW + ++HP R +
Sbjct: 461 YVILSNLYASAGRWEDVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEV 520
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+K++ +M+Q GYVP L+DV++EQK+ +L HS + A+ FG I+T +G IR+
Sbjct: 521 LAKMKEISIKMKQAGYVPDISCVLYDVDEEQKEKMLLGHSEKLALTFGLITTGEGIPIRV 580
Query: 119 INNL 122
NL
Sbjct: 581 FKNL 584
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-------------KSHPYRL 56
YV+LSN YA A RW+DTAR+R ++++ +KKTP W+ I +SHP
Sbjct: 466 YVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPG--WSSITVDGVVHEFVAGEESHPDTE 523
Query: 57 RINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTI 116
+I + ++L E M +GYVP T L D+E+ +K + HS + A+VFG ++TP I
Sbjct: 524 QIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPI 583
Query: 117 RLINNL 122
R++ NL
Sbjct: 584 RIMKNL 589
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 74/129 (57%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTE-----------IKSHP 53
N+ +V+LSN YAA RW D R+R +++N+ +KK P S+ E KSH
Sbjct: 407 NHCGDFVLLSNVYAARERWADVGRVREAMKNRDVKKVPGLSYIEGNGVIHKFYNADKSHE 466
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
I L ++ R+++ GYV T LHD+ +E K+N+L +HS + A+ FG IST +G
Sbjct: 467 SWREIYAKLDEIRFRVKEYGYVAETSFVLHDIGEEDKENVLGHHSEKLAVAFGLISTSEG 526
Query: 114 RTIRLINNL 122
I++I NL
Sbjct: 527 TPIQVIKNL 535
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-------------KSHPYRL 56
YV+LSN YA A RW+DTAR+R ++++ +KKTP W+ I +SHP
Sbjct: 466 YVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPG--WSSITVDGVVHEFVAGEESHPDTE 523
Query: 57 RINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTI 116
+I + ++L E M +GYVP T L D+E+ +K + HS + A+VFG ++TP I
Sbjct: 524 QIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPI 583
Query: 117 RLINNL 122
R++ NL
Sbjct: 584 RIMKNL 589
>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA+ RW D R+R+ +++ G+ K P S EI K+HP+ I
Sbjct: 425 YVLLSNMYASIGRWNDVKRVRMLMKDHGVDKLPGFSLVEINGAMHEFLTGDKAHPFSKEI 484
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ ++ R+ + G+ P T E L DVE+E K++ L YHS R AI F I++ IR+
Sbjct: 485 YSKIGEINRRLLEYGHKPRTSEVLFDVEEEDKEDFLSYHSERLAIAFALIASSSSMPIRI 544
Query: 119 INNL 122
I NL
Sbjct: 545 IKNL 548
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
+VIL N YA+ RW D AR+R ++ G+KK PACSW EI++ HP R I
Sbjct: 467 HVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEI 526
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+++ ++++ GYVP T + V+ ++++ L YHS + A+ F ++TP G TI +
Sbjct: 527 ARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHI 586
Query: 119 INNL 122
N+
Sbjct: 587 KKNI 590
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
+VIL N YA+ RW D AR+R ++ G+KK PACSW EI++ HP R I
Sbjct: 467 HVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEI 526
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+++ ++++ GYVP T + V+ ++++ L YHS + A+ F ++TP G TI +
Sbjct: 527 ARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHI 586
Query: 119 INNL 122
N+
Sbjct: 587 KKNI 590
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+LSN YA RRW A +R ++NKG+KK P SW E + SHP I
Sbjct: 550 HVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGDTSHPDMKMI 609
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+ L + E+ GYVP L DVED++KK L HS R A+ FG I TP IR+
Sbjct: 610 SGMLEWLNMKTEKAGYVPDLNAVLRDVEDDEKKRHLWVHSERLALAFGLIRTPSRGHIRI 669
Query: 119 INNL 122
+ NL
Sbjct: 670 LKNL 673
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
+VIL N YA+ RW D AR+R ++ G+KK PACSW EI++ HP R I
Sbjct: 458 HVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEI 517
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+++ ++++ GYVP T + V+ ++++ L YHS + A+ F ++TP G TI +
Sbjct: 518 ARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHI 577
Query: 119 INNL 122
N+
Sbjct: 578 KKNI 581
>gi|190612855|gb|ACE80805.1| pentatricopeptide repeat protein [Picea abies]
Length = 152
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 70/116 (60%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRINEALKDLF 66
A A RW++ A+LR ++ + +KK P CS+ E+ K+HP +I L++++
Sbjct: 1 AEAGRWEEVAKLRTMMKEREVKKQPGCSFIEVNREVHSFLVRDKTHPQSEKIYATLENVY 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
+M++ GYVP T LHDVE+E K+++L HS + I FG I+T G IR++ NL
Sbjct: 61 GQMKKAGYVPNTNLVLHDVEEEMKEDILCSHSEKLTISFGIINTSPGTPIRIMKNL 116
>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 923
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA RW D +LR ++ + K PACSW ++K SH + +I
Sbjct: 757 YVLLSNLYATNARWVDVDKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKI 816
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L ++ ++ + GYV T ALHD ++EQK++ L HS + A+ +G + P+G TIR+
Sbjct: 817 YVKLDEILLKLREVGYVADTSSALHDTDEEQKEHNLWNHSEKLALAYGLLVVPEGSTIRI 876
Query: 119 INNL 122
NL
Sbjct: 877 FKNL 880
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 71/129 (55%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHP 53
N YV+LSN YA RW+D +R + G+KK P CS E+ SHP
Sbjct: 401 TNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSLIEVGGVLHEFFVGDDSHP 460
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+I+ L+++ ER++ EGYV TKE L D+++E K+ L HS + A+ +G + T G
Sbjct: 461 ETRQIHMMLEEILERLKVEGYVGNTKEVLLDLDEEGKELALSLHSEKLALAYGFLKTSPG 520
Query: 114 RTIRLINNL 122
IR++ NL
Sbjct: 521 TPIRIVKNL 529
>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
Length = 652
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+LSN YA A RW D AR+R +++ K SW E+K HP I
Sbjct: 486 YVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEI 545
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+ L + M+ GYVP T+ LHDV+ E K+ ++ YHS + A+ F ++TP+G IR+
Sbjct: 546 HAELQRLTKLMKAAGYVPDTEMVLHDVKQEVKETMVGYHSEKLAMAFALLTTPEGSPIRV 605
Query: 119 INNL 122
+ NL
Sbjct: 606 VKNL 609
>gi|297817620|ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 76/135 (56%), Gaps = 13/135 (9%)
Query: 1 MINLNNMR--VYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS--HPYRL 56
+I L+ M YV+LSN YA RW + R+R + KG+KK P CS+ E++ H + +
Sbjct: 395 LIELDPMNSGAYVLLSNVYAKTGRWIEVKRIRHEMEVKGIKKVPGCSYVEVEGVVHEFVV 454
Query: 57 ---------RINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGA 107
RI L+++ +R+ + GYV TKE L D+E++ K+ L YHS + AI F
Sbjct: 455 GDESQQESERIYAMLEEIMQRLREAGYVSDTKEVLLDLEEKDKEMALSYHSEKLAIAFCL 514
Query: 108 ISTPDGRTIRLINNL 122
+ T G +R+I NL
Sbjct: 515 MKTRPGTPVRIIKNL 529
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 90.9 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+L+N YA+ W AR+R +++ +KK P SW E+K SH I
Sbjct: 620 HVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSRSTEI 679
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L +L + +++ GYVP + LHDVE +K+ LL++HS + A+ FG I+TP G IR+
Sbjct: 680 YAKLDELSDLLKKAGYVPMVEIDLHDVERSEKEQLLYHHSEKLAVAFGLIATPPGAPIRV 739
Query: 119 INNL 122
NL
Sbjct: 740 KKNL 743
>gi|190612933|gb|ACE80844.1| pentatricopeptide repeat protein [Fossombronia pusilla]
Length = 152
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRINEALKDLF 66
A W+ R++ +++G K P CSW E+ S HP I+E L+ L
Sbjct: 1 AGGGEWECCKRVQEMRKSRGAHKLPGCSWIEVDSQVHSFIVDDQVHPQIGEIHEELQRLL 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
E+M + GYVP T+ LHD+E+++K L +HS + AI +G ISTP G TIR+ NL
Sbjct: 61 EQMVEAGYVPDTRSVLHDLEEDEKVAHLSHHSEKLAIAYGLISTPPGTTIRIYKNL 116
>gi|302776458|ref|XP_002971391.1| hypothetical protein SELMODRAFT_95540 [Selaginella moellendorffii]
gi|300160523|gb|EFJ27140.1| hypothetical protein SELMODRAFT_95540 [Selaginella moellendorffii]
Length = 598
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+++N YA+ R + RLR + ++ +KK P SW E+ K H + I
Sbjct: 432 YVLMANIYASIRNFDLAERLRSVMADRNVKKQPGLSWIEVRGRIHTFAANDKLHARKEEI 491
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L LF +++EGY P T+ AL+DVE+E+K +L +HS + AI+FG +STPDG + +
Sbjct: 492 YAGLDRLFVELQREGYRPDTRVALYDVEEEKKVRMLLHHSEKLAIMFGLMSTPDGSPLFV 551
Query: 119 INNL 122
+ NL
Sbjct: 552 LKNL 555
>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Brachypodium distachyon]
Length = 642
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 72/123 (58%), Gaps = 11/123 (8%)
Query: 11 VILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRIN 59
++LSN YA R+W + + ++R++G+KK P SW E+ SHP RI
Sbjct: 477 ILLSNIYADLRQWSNAEKSWKTMRDQGVKKEPGRSWIELGKLVHVFIAGELSHPCSDRIV 536
Query: 60 EALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLI 119
+ L L R + GYVP T+ L D+ EQK++LL YHS + AI FG +++ +G+ +R++
Sbjct: 537 QELNRLIRRAKDLGYVPQTEFVLQDLGTEQKEDLLKYHSEKLAIAFGTMNSMEGKPVRIM 596
Query: 120 NNL 122
NL
Sbjct: 597 KNL 599
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+LSN YA A RW D AR+R +++ K SW E+K HP I
Sbjct: 471 YVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEI 530
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+ L + M++ GYVP T+ LHDV+ E K+ ++ YHS + A+ F ++TP+G IR+
Sbjct: 531 HAELQRLTKLMKEAGYVPDTEMVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPIRV 590
Query: 119 INNL 122
+ NL
Sbjct: 591 VKNL 594
>gi|302781642|ref|XP_002972595.1| hypothetical protein SELMODRAFT_97496 [Selaginella moellendorffii]
gi|300160062|gb|EFJ26681.1| hypothetical protein SELMODRAFT_97496 [Selaginella moellendorffii]
Length = 606
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 75/124 (60%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
Y +LSN Y+ A +W A+++ +R++G+KK SW EI HP ++I
Sbjct: 440 YSLLSNIYSDAGKWDMAAKVQKLMRDRGIKKPGGRSWIEINGKTSEFIVGDSWHPDLVQI 499
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ ++ + + M++ GYVP TK+ LHD E+E+K+++L++HS + AI G I TP TI +
Sbjct: 500 CQEIQRVSKVMKEHGYVPDTKQVLHDAEEEEKEDILYFHSEKLAIGLGLIKTPPKTTISI 559
Query: 119 INNL 122
+ N+
Sbjct: 560 VKNI 563
>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 993
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA RW D +LR ++ + K PACSW ++K SH + +I
Sbjct: 757 YVLLSNLYATNARWVDVDKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKI 816
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L ++ ++ + GYV T ALHD ++EQK++ L HS + A+ +G + P+G TIR+
Sbjct: 817 YVKLDEILLKLREVGYVADTSSALHDTDEEQKEHNLWNHSEKLALAYGLLVVPEGSTIRI 876
Query: 119 INNL 122
NL
Sbjct: 877 FKNL 880
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/129 (36%), Positives = 72/129 (55%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTE-----------IKSHP 53
+N YV+LSN YA A RW D R+R+ ++N G+ KTP S E K HP
Sbjct: 501 SNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHP 560
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+I E L +L ++++ GY+P L+DV+ E+K +L HS + A+ FG +++ G
Sbjct: 561 QHEKIYEYLDELNVKLQEVGYMPNVTSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPG 620
Query: 114 RTIRLINNL 122
I++I NL
Sbjct: 621 SVIQIIKNL 629
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/130 (36%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-------------H 52
N+ YV++SN YA +W +R VR + ++KTP S E+K H
Sbjct: 574 NVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPH 633
Query: 53 PYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPD 112
P I L DL +M+ GYVP L DVE+++K+ +L+ HS R AI FG I+TP
Sbjct: 634 PQHEEIQRGLHDLLAKMKSAGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPP 693
Query: 113 GRTIRLINNL 122
G + + NL
Sbjct: 694 GTPLHIYKNL 703
>gi|302780547|ref|XP_002972048.1| hypothetical protein SELMODRAFT_96927 [Selaginella moellendorffii]
gi|300160347|gb|EFJ26965.1| hypothetical protein SELMODRAFT_96927 [Selaginella moellendorffii]
Length = 606
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 75/124 (60%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
Y +LSN Y+ A +W A+++ +R++G+KK SW EI HP ++I
Sbjct: 440 YSLLSNIYSDAGKWDMAAKVQKLMRDRGIKKPGGRSWIEINGKTSEFIVGDSWHPDLVQI 499
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ ++ + + M++ GYVP TK+ LHD E+E+K+++L++HS + AI G I TP TI +
Sbjct: 500 CQEIQRVSKVMKEHGYVPDTKQVLHDAEEEEKEDILYFHSEKLAIGLGLIKTPPKTTISI 559
Query: 119 INNL 122
+ N+
Sbjct: 560 VKNI 563
>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 650
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 45/128 (35%), Positives = 73/128 (57%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPY 54
N VYV+L N YAA+++W++ ++R + +G+KKTP CS E+ +SHP
Sbjct: 480 NGAVYVLLCNIYAASKKWENLCQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQ 539
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
I L+++ + + + GY P T E D+ +E K+ L+ HS + AI + IS+ G
Sbjct: 540 SKEIYAKLENMMQGLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGV 599
Query: 115 TIRLINNL 122
TIR++ NL
Sbjct: 600 TIRIVKNL 607
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS---------- 51
I+ N Y LSN Y+A RW D A++ ++K +KK SWT I +
Sbjct: 628 IDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRVHVFGADDV 687
Query: 52 -HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
HP R + +++ +++ G+VP + LHDV+DE K+ +L HS + AI FG +ST
Sbjct: 688 LHPQRDTVYRTAAKMWDDIKKAGFVPDLQSVLHDVDDELKEEMLSRHSEKLAIAFGLVST 747
Query: 111 PDGRTIRLINNL 122
P+ T+R++ NL
Sbjct: 748 PEKTTLRIMKNL 759
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y++ S+ A RW++ A++R ++ +G+KK P+ SW ++K SHP +I
Sbjct: 842 YILFSSICATEHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTKI 901
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L +L R+++ GY + DVE EQ++ LL YHS + AI +G IST G IR+
Sbjct: 902 YSYLDELIGRLKEIGYSTDVTPVMQDVEQEQRQVLLGYHSEKLAIAYGIISTAPGTPIRV 961
Query: 119 INNL 122
+ NL
Sbjct: 962 MKNL 965
>gi|294460181|gb|ADE75673.1| unknown [Picea sitchensis]
Length = 246
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 71/128 (55%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPY 54
N+ YV+L N YAA +W D A++R + KG++KT CS+ E+ +SHP
Sbjct: 76 NVGYYVVLCNIYAATGKWDDVAKVRTLMNEKGLRKTAECSFIEVNNSVHTFHMEDRSHPQ 135
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
I L+ L +M++ GYVP ++VED+ K+ +L HS + AI FG I+T G
Sbjct: 136 SQGIYLMLESLVGQMKEAGYVPNLDSVFNNVEDDVKERMLMGHSEKLAIAFGLINTNSGT 195
Query: 115 TIRLINNL 122
+R+ +L
Sbjct: 196 PLRITKSL 203
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 74/134 (55%), Gaps = 15/134 (11%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI------------ 49
++ N+ YV+LSN YA +W+ ++R R++G++KTP W+ +
Sbjct: 650 VDSENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPG--WSSVVVGSVVEVFYAG 707
Query: 50 -KSHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAI 108
+SHP I E L+ L +M+ GYVP L DVE+++K+ +L HS R AIVFG I
Sbjct: 708 NQSHPQCAEIYEELRVLNAKMKSLGYVPDYSFVLQDVEEDEKEEILTSHSERLAIVFGII 767
Query: 109 STPDGRTIRLINNL 122
STP IR+ NL
Sbjct: 768 STPPKSPIRIFKNL 781
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++ N+ YV+LSN YA +W+ ++R R +G+KKTP S E+ +
Sbjct: 674 VDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQ 733
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP I L+ L +M+ GY+P L DVE+++K+++L HS R AI FG IST
Sbjct: 734 SHPKCKEIYAELRILTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIIST 793
Query: 111 PDGRTIRLINNL 122
P IR+ NL
Sbjct: 794 PPKSAIRIFKNL 805
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/130 (35%), Positives = 73/130 (56%), Gaps = 11/130 (8%)
Query: 4 LNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SH 52
L N +Y++LSN YAA +W++ AR+R ++ G++K P CS EI SH
Sbjct: 452 LANSGMYILLSNIYAAVGKWEEVARVRSMMKASGIQKEPGCSAIEIDRKVYEFVAGDMSH 511
Query: 53 PYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPD 112
P I L + +++ G+VP T+ LHD+++ K+ L HS + A+ FG IS+
Sbjct: 512 PCTDEIYAMLDKMNALVKEHGHVPQTELVLHDLDEATKEKALAVHSEKLAVAFGLISSRP 571
Query: 113 GRTIRLINNL 122
G TI+++ NL
Sbjct: 572 GSTIKIVKNL 581
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRL-----------RI 58
YVILSN YA A +W+D A ++ +R++G++K SW EIK Y I
Sbjct: 644 YVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEI 703
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L L++ M+++GY P ALH V+ E K L YHS R AI F ++TP G IR+
Sbjct: 704 KDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRI 763
Query: 119 INNL 122
+ NL
Sbjct: 764 MKNL 767
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 68/125 (54%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
Y ++SN +AA RW D +R+ ++ G+KK P CSW E+ KSHP I
Sbjct: 756 YALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDI 815
Query: 59 NEALKDLFERMEQE-GYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
L + +E++ GY+ TK H+V +E+K +L+ HS R A+ +G + TP G IR
Sbjct: 816 YLKLAQFTKLLEKKGGYIAQTKFVFHNVSEEEKTQMLYGHSERLALGYGLLVTPKGTCIR 875
Query: 118 LINNL 122
+ NL
Sbjct: 876 ITKNL 880
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 69/128 (53%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPY 54
N VYV+L N YAA ++WK+ +R + +G+KK P CS E+ KSHP
Sbjct: 574 NGAVYVLLCNIYAACKKWKNLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQ 633
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
I L+++ + + GY P T E DV +E K+ L+ HS + AI + IS+ G
Sbjct: 634 SKEIYAKLENMKQDLSNAGYSPDTSEVFLDVGEEDKETALYMHSEKLAIAYALISSGKGV 693
Query: 115 TIRLINNL 122
TIR++ NL
Sbjct: 694 TIRIVKNL 701
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS---------- 51
I N Y++LSN YA+A RW+D AR+R + K MKK P CS E+ S
Sbjct: 497 IEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFVVGDK 556
Query: 52 -HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
HP I L+++ +E+ G+VP T E L ++E+E K+ L +HS + AI FG IST
Sbjct: 557 FHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIST 616
Query: 111 PDGRTIRLINNL 122
G + ++ NL
Sbjct: 617 KPGTKLTIVKNL 628
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 68/128 (53%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPY 54
N V+LSN YA R+W+D +R+ +R+ +KK P SW ++ SHP
Sbjct: 446 NSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPR 505
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+ I E L L ++++ GYVP T D++D K+ LLH HS R A+ F IS P G+
Sbjct: 506 KSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGK 565
Query: 115 TIRLINNL 122
I + NL
Sbjct: 566 PIIVKKNL 573
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 72/128 (56%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPY 54
N VYV+L N YAA +RW++ ++R + +G+KKTP CS E+ +SHP
Sbjct: 542 NGAVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQ 601
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
I L+++ + + + GY P T E D+ +E K+ L+ HS + AI + IS+ G
Sbjct: 602 SKEIYAKLENMMQDLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGI 661
Query: 115 TIRLINNL 122
TIR++ NL
Sbjct: 662 TIRIVKNL 669
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 67/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+LSN YAAA A LR S+RN G+KK SW EIK HP I
Sbjct: 659 YVLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLSWVEIKGEVHAFSVGSADHPDMRII 718
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
N L+ L + +EGYVP LHDV++E+K +L HS R A+ +G TP G IR+
Sbjct: 719 NAMLEWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRI 778
Query: 119 INNL 122
+ NL
Sbjct: 779 MKNL 782
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 71/125 (56%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YVILSN YA RW+D LR ++++G+ K P CS E+ + H + +
Sbjct: 437 YVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVEL 496
Query: 59 NEALKDLFERMEQEGYVPTTKEALH-DVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
AL +L + ++ GYVP T H D+E+E K+ +L YHS + A+ FG ++TP G TIR
Sbjct: 497 RRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLAMAFGLLNTPPGTTIR 556
Query: 118 LINNL 122
+ NL
Sbjct: 557 VAKNL 561
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 72/129 (55%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHP 53
N YV LS YAAA W+D A+LR ++ +G+KK P SW E+ +SHP
Sbjct: 649 QNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHP 708
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
I L+ L ++++ GYVP T+ +HD++ E K+ + +HS + AI +G ISTP
Sbjct: 709 RTEEIYSELEALTKQIKSLGYVPDTRFVMHDLDQEGKERAVCHHSEKLAIAYGLISTPPE 768
Query: 114 RTIRLINNL 122
IR+ NL
Sbjct: 769 TPIRVSKNL 777
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTE-----------IKSHPYRLRI 58
YVILSN YA+A RW D +R + K + K P SW + ++HP R +
Sbjct: 462 YVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEV 521
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+K++ +M+Q GYVP L+DV++EQK+ +L HS + A+ FG I+T +G IR+
Sbjct: 522 LAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRV 581
Query: 119 INNL 122
NL
Sbjct: 582 FKNL 585
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA+A RW D A++R+S++ KG++K P S +I+ SHP I
Sbjct: 676 YVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNI 735
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L ++ +R G+VP L DV++++K +L HS + A+ +G IS+ G TIR+
Sbjct: 736 EAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRI 795
Query: 119 INNL 122
+ NL
Sbjct: 796 VKNL 799
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA+A RW D A++R+S++ KG++K P S +I+ SHP I
Sbjct: 676 YVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNI 735
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L ++ +R G+VP L DV++++K +L HS + A+ +G IS+ G TIR+
Sbjct: 736 EAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRI 795
Query: 119 INNL 122
+ NL
Sbjct: 796 VKNL 799
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRL-----------RI 58
YVILSN YA A +W+D A ++ +R++G++K SW EIK Y I
Sbjct: 644 YVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEI 703
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L L++ M+++GY P ALH V+ E K L YHS R AI F ++TP G IR+
Sbjct: 704 KDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRI 763
Query: 119 INNL 122
+ NL
Sbjct: 764 MKNL 767
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/124 (37%), Positives = 65/124 (52%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y++LSN +A RW D R+R + +KG+KK P CSW E SHP I
Sbjct: 823 YILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEI 882
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L +L + YVP T+ LH+V + +KK L +HS R A+ F IST + IR+
Sbjct: 883 HLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRI 942
Query: 119 INNL 122
NL
Sbjct: 943 FKNL 946
>gi|302799324|ref|XP_002981421.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
gi|300150961|gb|EFJ17609.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
Length = 789
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 68/125 (54%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y +LSN Y+AA RW + +R + G +K P SW E+K SHP I
Sbjct: 622 YTVLSNVYSAAGRWDEAEEIRRRMSENGARKEPGRSWIEVKNRVHEFAVKDRSHPRTGEI 681
Query: 59 NEALKDLFERME-QEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
E L +L ++ +E YVP LHDVEDE ++NLL +HS + A+ FG I T +G I
Sbjct: 682 YERLDELRVVLKSEEDYVPDVGSVLHDVEDEHRENLLWHHSEKLALGFGLIGTKEGSKIT 741
Query: 118 LINNL 122
+I NL
Sbjct: 742 IIKNL 746
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+LSN YA A RW + A++R + +KGMKK P CS EI S HP I
Sbjct: 529 YVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREI 588
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+++ +E+ G+VP T E L ++E+E K+ L +HS + AI FG IST G + +
Sbjct: 589 YGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTI 648
Query: 119 INNL 122
+ NL
Sbjct: 649 VKNL 652
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+LSN YA A RW + A++R + +KGMKK P CS EI S HP I
Sbjct: 544 YVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREI 603
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+++ +E+ G+VP T E L ++E+E K+ L +HS + AI FG IST G + +
Sbjct: 604 YGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTI 663
Query: 119 INNL 122
+ NL
Sbjct: 664 VKNL 667
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++ N VY++LSN YA RW+D RLR ++ KG+KK P CS E+ +
Sbjct: 453 LDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIKKEPGCSLIEMDGIIHEFVAGDQ 512
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP I L+ + + GY P E +V +++KK +L++HS + AI F +S+
Sbjct: 513 SHPMSKEIYSKLESIISDLNNVGYFPDVTEVFVEVAEKEKKKVLYWHSEKLAIAFALLSS 572
Query: 111 PDGRTIRLINNL 122
IR++ NL
Sbjct: 573 KPNTVIRIVKNL 584
>gi|190612765|gb|ACE80760.1| pentatricopeptide repeat protein [Pellia epiphylla]
Length = 152
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 68/116 (58%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRINEALKDLF 66
AAA W+++A ++ R +G++K P C+W E+ + HP I+ L L
Sbjct: 1 AAAGEWENSAAIQQLRRQRGVRKLPGCTWIEVNKEVHSFIVDDQEHPSIGEIHSKLDILL 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
++M + GYVP T ALHDV++E+K+ L HS + AI FG ISTP G+ +R+ NL
Sbjct: 61 DQMMESGYVPDTDFALHDVDEERKQVHLCRHSEKLAIAFGLISTPSGQPLRIFKNL 116
>gi|356521885|ref|XP_003529581.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Glycine max]
Length = 603
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 70/126 (55%), Gaps = 13/126 (10%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRL------------R 57
YV LSNAYA A W++ LR +++ G+ K P SW EIK Y
Sbjct: 435 YVTLSNAYALAGDWENAHNLRSEMKHTGVYKEPGSSWIEIKESTYLFHAGDISKYTQGRE 494
Query: 58 INEALKDLFERMEQEGYVPTTKEALH-DVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTI 116
I L++L ERM+ GYV TK + DVE+E K+ ++ HS + A+ FG I+TP G TI
Sbjct: 495 ILSLLRELEERMKGRGYVGGTKGLVFVDVEEEAKEEIVSMHSEKLALAFGLINTPKGVTI 554
Query: 117 RLINNL 122
R++ NL
Sbjct: 555 RIMKNL 560
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+L N YA A RW D A++R ++ G+KK PACSW E++ +HP R I
Sbjct: 424 HVLLYNIYALAGRWNDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREI 483
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ + + +++++ GYVP + L ++ ++++ L YHS + A+ F ++TP G TIR+
Sbjct: 484 HNMWEQISDKIKEIGYVPDSSHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRI 543
Query: 119 INNL 122
N+
Sbjct: 544 KKNI 547
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 71/125 (56%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YVILSN A A +W+D LR + +KG K P CS E+ + H +
Sbjct: 434 YVILSNLCARAGKWEDVDTLRKLMIHKGAVKIPGCSSIEVDNVVHEFFSGDGVHYVSTAL 493
Query: 59 NEALKDLFERMEQEGYVPTTKEALH-DVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
+ AL +L + ++ GYVP T +H D+EDE+K+ L YHS + AI FG ++TP G TIR
Sbjct: 494 HRALDELVKELKSVGYVPDTSLVVHPDMEDEEKEITLRYHSEKLAISFGLLNTPPGTTIR 553
Query: 118 LINNL 122
++ NL
Sbjct: 554 VVKNL 558
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 74/130 (56%), Gaps = 12/130 (9%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHP 53
+N Y++LSN YAA RWKD A +R ++N +KK A SW EI ++H
Sbjct: 523 HNAGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHS 582
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+I E L L +++++ G+ P T LHDV +E+K + + YHS + A+ F I P G
Sbjct: 583 ETEQIYEELNRLIKKLQESGFTPDTNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKPHG 642
Query: 114 RT-IRLINNL 122
RT IR++ N+
Sbjct: 643 RTPIRIMKNI 652
>gi|242047426|ref|XP_002461459.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
gi|241924836|gb|EER97980.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
Length = 568
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YAA RW D LR ++ G++K P S E++ SHP +I
Sbjct: 428 YVLLSNLYAAVGRWADVHVLRKTMVKDGVRKNPGRSLVELRNSVYEFVMGDRSHPESEQI 487
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L ++ + + +EGY+P T L D+E+E+K+ L+YHS R AI F + + G IR+
Sbjct: 488 YQMLAEVADSLRREGYIPRTSNVLADIEEEEKETALNYHSERLAIAFALLKSLPGTPIRI 547
Query: 119 INNL 122
+ NL
Sbjct: 548 VKNL 551
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 68/122 (55%), Gaps = 14/122 (11%)
Query: 12 ILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRINE 60
+LSN YA A RW D + R + +K P CS+ EI KSHP I
Sbjct: 575 LLSNVYAEAGRWDDVRKTR---NRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAA 631
Query: 61 ALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLIN 120
+K L ++M+ GYVP + LH+V++E+K+ +L YHS + AI +G ISTP G + ++
Sbjct: 632 EIKRLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVK 691
Query: 121 NL 122
NL
Sbjct: 692 NL 693
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 74/128 (57%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPY 54
N YV++SN YAA W + +R + + G+KK P CSW ++K SHP
Sbjct: 590 NPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNKVYTLLACDKSHPQ 649
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+I E + ++ E M + G+ P AL DVE+++++ +L HS + A+VFG ++TPDG
Sbjct: 650 IDQITEKMDEISEEMRKSGHRPNLDFALQDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGT 709
Query: 115 TIRLINNL 122
+++I NL
Sbjct: 710 PLQVIKNL 717
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRLRINEA 61
+N ++ YV++SN YA +W +R S++ KG+KK P SW EI+ Y R +
Sbjct: 721 LNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDK 780
Query: 62 -------LKDLFER----MEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
+KDL E M +EGYV + ALHDVE++ K+++L HS R AI FG ++T
Sbjct: 781 SFEQYDKVKDLLEYLVRLMAKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLNT 840
Query: 111 PDGRTIRLINNL 122
G + + L
Sbjct: 841 KPGSPLLIFPTL 852
>gi|302818616|ref|XP_002990981.1| hypothetical protein SELMODRAFT_132724 [Selaginella moellendorffii]
gi|300141312|gb|EFJ08025.1| hypothetical protein SELMODRAFT_132724 [Selaginella moellendorffii]
Length = 578
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/124 (36%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y+++ N YA A +W + A +R S+ + G KK P SW E+K SHP I
Sbjct: 412 YLVMHNLYAGAGKWPEAAAVRKSMVDLGPKKEPGLSWIEVKGRIHEFRVGDTSHPRSSEI 471
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+ L ++M++ G+V TK ++D++ ++K++LL HS + AI FG IST G +R+
Sbjct: 472 HRELERLNDKMKRAGFVCDTKAVVYDLQAKEKESLLCQHSEKLAIAFGLISTAAGEPLRI 531
Query: 119 INNL 122
+ NL
Sbjct: 532 MKNL 535
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 68/122 (55%), Gaps = 14/122 (11%)
Query: 12 ILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRINE 60
+LSN YA A RW D + R + +K P CS+ EI KSHP I
Sbjct: 575 LLSNVYAEAGRWDDVRKTR---NRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAA 631
Query: 61 ALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLIN 120
+K L ++M+ GYVP + LH+V++E+K+ +L YHS + AI +G ISTP G + ++
Sbjct: 632 EIKRLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVK 691
Query: 121 NL 122
NL
Sbjct: 692 NL 693
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRL-----------RI 58
YVILSN YA A +W+D A ++ +R++G++K SW EIK Y I
Sbjct: 842 YVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEI 901
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L L++ M+++GY P ALH V+ E K L YHS R AI F ++TP G IR+
Sbjct: 902 KDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRI 961
Query: 119 INNL 122
+ NL
Sbjct: 962 MKNL 965
>gi|302773067|ref|XP_002969951.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
gi|300162462|gb|EFJ29075.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
Length = 789
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 68/125 (54%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y +LSN Y+AA RW + +R + G +K P SW E+K SHP I
Sbjct: 622 YTVLSNVYSAAGRWDEAEEIRRRMGENGARKEPGRSWIEVKNRVHEFAVKDRSHPRTGEI 681
Query: 59 NEALKDLFERME-QEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
E L +L ++ +E YVP LHDVEDE ++NLL +HS + A+ FG I T +G I
Sbjct: 682 YERLDELRVVLKSEEDYVPDVGSVLHDVEDEHRENLLWHHSEKLALGFGLIGTKEGSKIT 741
Query: 118 LINNL 122
+I NL
Sbjct: 742 IIKNL 746
>gi|190612849|gb|ACE80802.1| pentatricopeptide repeat protein [Isoetes velata]
Length = 152
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRINEALKDLF 66
A A RW D AR+R + +G+KK P CS EI SHP + I LK L
Sbjct: 1 ARAGRWVDVARIRKLMVERGIKKEPGCSSIEIGNQVHTFLIGDNSHPMKEAIYARLKLLN 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
+++ GYVP T LHD+++E K+ LL YHS + AI FG +ST G +R++ NL
Sbjct: 61 TQLDACGYVPDTSSVLHDLDEETKETLLGYHSEKLAISFGLLSTSSGTPLRIVKNL 116
>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA A+RW+D AR R ++ +KG+ + P S E+K HP +
Sbjct: 396 YVVLSNMYAQAQRWEDVARTRTNMFSKGLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESV 455
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L + +++ EGY P T + L DV++E+KK L HS + AI + I T G +R+
Sbjct: 456 YEMLYQMEWQLKFEGYXPDTTQVLCDVDEEEKKQRLSGHSQKLAIAYALIHTSQGSPVRI 515
Query: 119 INNL 122
+ NL
Sbjct: 516 VRNL 519
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
Y++LSN YA+ W + R+R +++KG++K P SW E+ +SHP I
Sbjct: 582 YILLSNIYASKGLWDEENRIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDI 641
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L L +M++ GY+P T L DVE++ K+ +L HS + A+V G ++T G+ +++
Sbjct: 642 LEKLDKLNMQMKKSGYLPKTNFVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQV 701
Query: 119 INNL 122
I NL
Sbjct: 702 IKNL 705
>gi|356537359|ref|XP_003537195.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g13770, mitochondrial-like
[Glycine max]
Length = 600
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YVILSN YA+A RW+D LR + K + K P S E+ SHP R +
Sbjct: 435 YVILSNLYASAGRWEDVTSLRNLMLKKAVTKEPGRSLIEVDQVLQTFHPSDCSHPRREEV 494
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ ++L R ++ GY P LHDV++EQK+ +L HS + A+ FG I+TP+ I +
Sbjct: 495 SAKXQELLVRFKEAGYFPDLSCVLHDVDEEQKEKILLSHSEKLALSFGLIATPESVLICV 554
Query: 119 INNL 122
I NL
Sbjct: 555 IKNL 558
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK------------SHPYRLR 57
+++LSN YA+ RW D A LR ++R++ + K P CSW ++ HP
Sbjct: 618 FILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSE 677
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
IN L+ L + + GY P LHDV++E+K L YHS + A+ +G + P G IR
Sbjct: 678 INRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIR 737
Query: 118 LINNL 122
++ NL
Sbjct: 738 VMKNL 742
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 76/132 (57%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS---------- 51
+N ++ YV+ SN A+ +RW D +R + ++ +KK PACSW ++K+
Sbjct: 951 LNSSDDSAYVLYSNVCASTQRWGDVENVRKQMESQSLKKKPACSWIKLKNKVMTFGMGDQ 1010
Query: 52 -HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
HP +I L++L + +EG++P T AL D ++EQK++ L HS R A+ FG I++
Sbjct: 1011 FHPQSAQIYAKLEELRKMTREEGHMPDTSYALQDTDEEQKEHNLWNHSERIALAFGLINS 1070
Query: 111 PDGRTIRLINNL 122
+G +R+ NL
Sbjct: 1071 AEGSPLRIFKNL 1082
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 75/129 (58%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRL-------- 56
NN YV+LSN Y+ RRW + +LR + +G++K P CS EI + Y
Sbjct: 391 NNGENYVLLSNIYSRERRWAEVGKLRGMMSLRGIRKVPGCSSIEINNVVYEFVASNDRKP 450
Query: 57 ---RINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
I + L +L +++++ GYV T AL+D+E E+K++ + YHS + A+ FG +++P
Sbjct: 451 EFEAIYKQLDNLIKKLKENGYVTGTDMALYDIEKEEKEHSVMYHSEKLALAFGLLNSPLD 510
Query: 114 RTIRLINNL 122
T+R++ NL
Sbjct: 511 CTLRIVKNL 519
>gi|190612831|gb|ACE80793.1| pentatricopeptide repeat protein [Psilotum nudum]
Length = 152
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 67/117 (57%), Gaps = 13/117 (11%)
Query: 18 AAARRWKDTARLRVSVRNKGMKK-TPACSWTEIKS-----------HPYRLRINEALKDL 65
AA+ RW D ++R + N+G+KK P C+W E+ S HP I+ L L
Sbjct: 1 AASSRWNDKLKVRTMMENRGVKKRQPGCTWIEVNSQLHSFVVDDMSHPQTKEIHAELNRL 60
Query: 66 FERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
F M + GYVP T+ LHD+E+++ +L H HS + AI FG I+TP G IR++ NL
Sbjct: 61 FGLMVEIGYVPDTRFVLHDLEEQEGTSLCH-HSEKLAIAFGLITTPAGTPIRIMKNL 116
>gi|147799436|emb|CAN76870.1| hypothetical protein VITISV_012312 [Vitis vinifera]
Length = 420
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 74/130 (56%), Gaps = 12/130 (9%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRL-------- 56
+N Y++LSN YAA RWKD A +R ++N +KK A SW EI S ++
Sbjct: 211 HNAGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDSQVHKFVAEDRTHS 270
Query: 57 ---RINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+I + L L +++++ G+ P T LHDV +E+K + + YHS + A+ F I P G
Sbjct: 271 ETEQIYDKLNRLIKKLQESGFTPDTNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKPHG 330
Query: 114 RT-IRLINNL 122
RT IR++ N+
Sbjct: 331 RTPIRIMKNI 340
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/124 (37%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y++LSN YA+ W + +R +R++G+KK P SW EIK SHP +I
Sbjct: 550 YILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVHMLLAGDSSHPQMPQI 609
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L L M++ GYVP T L DVE++ K+ +L HS + A+V G ++T G +++
Sbjct: 610 IEKLAKLTVEMKKSGYVPHTDFVLQDVEEQDKEQILCGHSEKLAVVLGLLNTKPGFPLQV 669
Query: 119 INNL 122
I NL
Sbjct: 670 IKNL 673
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 75/129 (58%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRL-------- 56
NN YV+LSN Y+ RRW + +LR + +G++K P CS EI + Y
Sbjct: 391 NNGENYVLLSNIYSRERRWAEVGKLRGMMNLRGIRKVPGCSSIEINNVVYEFVASNDRKP 450
Query: 57 ---RINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
I + L +L +++++ GYV T AL+D+E E+K++ + YHS + A+ FG +++P
Sbjct: 451 EFEAIYKQLDNLIKKLKENGYVTGTDMALYDIEKEEKEHSVMYHSEKLALAFGLLNSPLD 510
Query: 114 RTIRLINNL 122
T+R++ NL
Sbjct: 511 CTLRIVKNL 519
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK------------SHPYRLR 57
+++LSN YA+ RW D A LR ++R++ + K P CSW ++ HP
Sbjct: 618 FILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSE 677
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
IN L+ L + + GY P LHDV++E+K L YHS + A+ +G + P G IR
Sbjct: 678 INRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIR 737
Query: 118 LINNL 122
++ NL
Sbjct: 738 VMKNL 742
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/124 (37%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA A+RW+D A+ R ++ +KG+ + P S E+K HP +
Sbjct: 439 YVVLSNMYAQAQRWEDVAKTRTNMFSKGLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESV 498
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L + +++ EGY P T + L DV++E+KK L HS + AI + I T G IR+
Sbjct: 499 YEMLYQMEWQLKFEGYSPDTTQVLCDVDEEEKKQRLSGHSQKLAIAYALIHTSQGSPIRI 558
Query: 119 INNL 122
+ NL
Sbjct: 559 VRNL 562
>gi|383164857|gb|AFG65224.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
Length = 136
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 67/106 (63%), Gaps = 11/106 (10%)
Query: 28 RLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRINEALKDLFERMEQEGYVP 76
R+R ++++G++K P SW E+K SHP I + L+ L E++++ GY+P
Sbjct: 1 RMRQMMKSRGIQKKPGYSWIEVKNRVHSFMVNDRSHPQTEEIYKTLESLTEQIKEVGYMP 60
Query: 77 TTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
T LHD+E+E K+++L YHS + AI FG ISTP G +IR++ NL
Sbjct: 61 DTNFVLHDLEEEHKEHVLCYHSEKLAIAFGIISTPPGSSIRIVKNL 106
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+LSN YA A RW + A+ R + +KGMKK P CS EI S HP I
Sbjct: 544 YVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREI 603
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+++ +E+ G+VP T E L ++E+E K+ L +HS + AI FG IST G + +
Sbjct: 604 YGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTI 663
Query: 119 INNL 122
+ NL
Sbjct: 664 VKNL 667
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 67/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+LSN YA ARRW + A +R S++ KG++K P SW E + SHP I
Sbjct: 654 HVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPDTKLI 713
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
N L+ L + EGYVP L DVED K+ L HS R A+ +G I TP +R+
Sbjct: 714 NGMLEWLNMKARNEGYVPDFSSVLLDVEDVDKEQRLWVHSERLALAYGLIRTPSISPLRI 773
Query: 119 INNL 122
I NL
Sbjct: 774 IKNL 777
>gi|302765350|ref|XP_002966096.1| hypothetical protein SELMODRAFT_84620 [Selaginella moellendorffii]
gi|300166910|gb|EFJ33516.1| hypothetical protein SELMODRAFT_84620 [Selaginella moellendorffii]
Length = 598
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+++N YA+ R + RLR + ++ +KK P SW E+ K H + I
Sbjct: 432 YVLMANIYASIRNFDLAERLRSVMADRNVKKQPGLSWIEVRGRIHTFAANDKLHARKEEI 491
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L LF +++EGY P T+ AL+DVE+E+K +L +H + AI+FG +STPDG + +
Sbjct: 492 YAGLDRLFVELQREGYRPDTRVALYDVEEEKKVRMLLHHGEKLAIMFGLMSTPDGSPLFV 551
Query: 119 INNL 122
+ NL
Sbjct: 552 LKNL 555
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 68/129 (52%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHP 53
NN VYV+ N YAA +W LR + ++G+KKTP CS E+ +SHP
Sbjct: 464 NNGAVYVLQCNIYAACNKWDKLRELRQVMMDRGIKKTPGCSLIEMNGIVHEFVAGDQSHP 523
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
I L + ++ GY P T E D+ +E K+N ++ HS + AI FG I++ G
Sbjct: 524 QTKEIYGKLNKMTSDLKIAGYSPNTSEVFLDIAEEDKENAVYRHSEKLAIAFGLINSGPG 583
Query: 114 RTIRLINNL 122
TIR++ NL
Sbjct: 584 VTIRIVKNL 592
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YAA RW A LR +R + + KTP CS+ ++ SHP I
Sbjct: 474 YVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDLGDTIHEFVAGDSSHPQLEMI 533
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L ++ + ++ GY P T + L D+++E+K+ L +HS + AI FG I T G TIR+
Sbjct: 534 YAKLGEMSQELKAAGYKPDTGQVLLDMDEEEKETALCHHSEKLAIAFGLIKTDPGTTIRI 593
Query: 119 INNL 122
NL
Sbjct: 594 TKNL 597
>gi|383164847|gb|AFG65219.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164871|gb|AFG65231.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164873|gb|AFG65232.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164875|gb|AFG65233.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
Length = 136
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 66/106 (62%), Gaps = 11/106 (10%)
Query: 28 RLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRINEALKDLFERMEQEGYVP 76
R+R ++++G++K P SW E+K SHP I L+ L E++++ GY+P
Sbjct: 1 RMRQMMKSRGIQKKPGYSWIEVKNRVHSFMVNDRSHPQTQEIYTTLESLTEQIKEVGYMP 60
Query: 77 TTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
T LHD+E+E K+++L YHS + AI FG ISTP G +IR++ NL
Sbjct: 61 DTNFVLHDLEEEHKEHVLCYHSEKLAIAFGIISTPPGSSIRIVKNL 106
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 72/123 (58%), Gaps = 11/123 (8%)
Query: 11 VILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRIN 59
++LSN YA+A RW+D A++R ++ G+KK PACSW EI ++HP I
Sbjct: 496 MLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEIR 555
Query: 60 EALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLI 119
+++ ++++ GYVP T L V+ ++++ L YHS + A+ F ++TP G IR+
Sbjct: 556 GKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIK 615
Query: 120 NNL 122
N+
Sbjct: 616 KNI 618
>gi|356570490|ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Glycine max]
Length = 582
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 70/125 (56%), Gaps = 11/125 (8%)
Query: 9 VYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTE-----------IKSHPYRLR 57
+ V+LSNAYAAA RW++ AR R +R++G+KK SW E +SH
Sbjct: 415 IQVLLSNAYAAAGRWEEAARARKMMRDQGIKKETGLSWVEEGNRVHTFAAGDRSHGKTRE 474
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I E L++L E M + GYV T L +V+ ++K + YHS R AI FG I+ P IR
Sbjct: 475 IYEKLEELGEEMAKAGYVADTSFVLKEVDGDEKSQTIRYHSERLAIAFGLITFPPEWPIR 534
Query: 118 LINNL 122
++ NL
Sbjct: 535 VMKNL 539
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 69/132 (52%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
I+ N YV+L + +A W A+LR +R++ +KK P CSW + K
Sbjct: 571 IDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQ 630
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP+ I E L+ L +M +EGY P LHDV D K +++ +HS + AI FG +
Sbjct: 631 SHPFSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLMFV 690
Query: 111 PDGRTIRLINNL 122
P IR++ NL
Sbjct: 691 PHEMPIRIVKNL 702
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+LSN YA A RW + A +R + +KGMKK P CS EI S HP I
Sbjct: 544 YVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREI 603
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+++ +E+ G+VP T E L ++E+E K+ L +HS + AI FG IST G + +
Sbjct: 604 YGMLEEMEVLLEEAGFVPDTSEVLQEMEEEFKQGALRHHSEKLAIAFGLISTKPGTKLTI 663
Query: 119 INNL 122
+ NL
Sbjct: 664 VKNL 667
>gi|358357204|gb|AEU08442.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 151
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 70/116 (60%), Gaps = 12/116 (10%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRINEALKDLF 66
AA RW DTA++R ++++G++K P SW E+ K HP I LK L
Sbjct: 1 AAVGRWDDTAKVRKMMKDRGVRKEPGHSWIEVDNQVHRFVAEDKVHPKIEEILSELKRLT 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
+ M++ GY+P T+ ALH+ ++EQK++ L +HS + AI FG I TP G IR+I NL
Sbjct: 61 QWMKETGYIPDTRFALHE-QEEQKQSSLCHHSEKLAIAFGLICTPPGTLIRVIKNL 115
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV LSN YA++R W A++R+ +R KG+ K S EI KSHP I
Sbjct: 576 YVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEI 635
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L+ L R+++ G++P + LHD+ E+K+ L HS R AI +G IST G T+R+
Sbjct: 636 FEELESLERRLKEAGFIPHIESVLHDLNQEEKEETLCNHSERLAIAYGLISTAPGTTLRI 695
Query: 119 INNL 122
NL
Sbjct: 696 TKNL 699
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 66/124 (53%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YAAA W + +R + + +KK P SW E+K SHP I
Sbjct: 710 YVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHI 769
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L +L R+ GY P T HD+EDEQK+ +L +HS R AI FG I+T +++
Sbjct: 770 YSKLSELNTRLRDVGYQPDTNYVFHDIEDEQKETILSHHSERLAIAFGLIATLPEIPLQI 829
Query: 119 INNL 122
+ NL
Sbjct: 830 VKNL 833
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YAAA +W++ R ++ +KK P SW ++K SH I
Sbjct: 807 YVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLI 866
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
++ + +R+++EGYVP T+ AL D+E+E K++ L YHS + AI +G + TP T+R+
Sbjct: 867 YNKVEYVMKRIKEEGYVPDTEFALVDIEEEDKESALSYHSEKLAIAYGLMKTPPSTTLRV 926
Query: 119 INNL 122
I NL
Sbjct: 927 IKNL 930
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 67/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+LSN YAAA + A R S+RN G+KK SW EIK HP I
Sbjct: 657 YVLLSNMYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSVGSADHPDMRII 716
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
N L+ L + +EGYVP LHDV++E+K +L HS R A+ +G TP G IR+
Sbjct: 717 NAMLEWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRI 776
Query: 119 INNL 122
+ NL
Sbjct: 777 MKNL 780
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 71/129 (55%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHP 53
N+ YV+LSN Y+ R + A +R +V+ + + KTP C+ E+ +SH
Sbjct: 607 GNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCGDRSHS 666
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
I L++L +M + GY T ALHDVE+E+K+ + + HS + AI FG I+T G
Sbjct: 667 QTTSIYAKLEELTGKMREMGYQSETVTALHDVEEEEKELMFNVHSEKLAIAFGLITTEPG 726
Query: 114 RTIRLINNL 122
IR+I NL
Sbjct: 727 TEIRIIKNL 735
>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
Length = 702
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+L N Y+AA +W A +R +R +G+ K P CSW E+ +HP +
Sbjct: 536 YVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEV 595
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ ++ L+ M GY P T LHD++D K +L HS + AI FG + G TIR+
Sbjct: 596 HAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRV 655
Query: 119 INNL 122
NL
Sbjct: 656 AKNL 659
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+L+N YA+A W + A++R +++ +KK PA SW E+K SHP I
Sbjct: 711 HVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEI 770
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L +L + M + G+VP LHD++ +K+ LL +HS R A+ F +STP G IR+
Sbjct: 771 YAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRV 830
Query: 119 INNL 122
NL
Sbjct: 831 KKNL 834
>gi|190612795|gb|ACE80775.1| pentatricopeptide repeat protein [Scapania aequiloba]
Length = 143
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 71/129 (55%), Gaps = 11/129 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS---------- 51
+++ N YV+LSN Y+ A +W+ +AR + + G++K P +W ++
Sbjct: 15 MDVGNPAGYVLLSNIYSGAGKWEKSARTKQKMIEMGVRKDPGRTWIQVDGKIHSFTVDDN 74
Query: 52 -HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
HP I+E L+++ +E+ GY P T LHD ++ +K + L YHS + AI +G IST
Sbjct: 75 RHPQIQEIHEQLRNMSAHLEEAGYAPDTGHVLHDFDEGEKVSHLGYHSEKLAIAYGLIST 134
Query: 111 PDGRTIRLI 119
P G +R+
Sbjct: 135 PAGSLLRIF 143
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 72/129 (55%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHP 53
N+ YV+LSN Y+A + + + A +R V+ + + KTP C+ E+ +SHP
Sbjct: 610 QNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHP 669
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
I L+ L +M + G+ T ALHDVE+E+K+ ++ HS + AI FG I++ G
Sbjct: 670 QATAIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSEKLAIAFGLITSEPG 729
Query: 114 RTIRLINNL 122
IR+I NL
Sbjct: 730 TEIRIIKNL 738
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+L+N YA+A W + A++R +++ +KK PA SW E+K SHP I
Sbjct: 711 HVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEI 770
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L +L + M + G+VP LHD++ +K+ LL +HS R A+ F +STP G IR+
Sbjct: 771 YAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRV 830
Query: 119 INNL 122
NL
Sbjct: 831 KKNL 834
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACS-----------WTEIK 50
++ N+ YV+LSN YA +W+ ++R R++G++KTP S +T +
Sbjct: 624 VDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQ 683
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
+HP I + LK L +M+ GYVP D+E+++K+ +L+ HS R AI FG IST
Sbjct: 684 THPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIIST 743
Query: 111 PDGRTIRLINNL 122
P IR+ NL
Sbjct: 744 PPRSPIRIFKNL 755
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACS-----------WTEIK 50
++ N+ YV+LSN YA +W+ ++R R++G++KTP S +T +
Sbjct: 624 VDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQ 683
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
+HP I + LK L +M+ GYVP D+E+++K+ +L+ HS R AI FG IST
Sbjct: 684 THPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIIST 743
Query: 111 PDGRTIRLINNL 122
P IR+ NL
Sbjct: 744 PPRSPIRIFKNL 755
>gi|297743669|emb|CBI36552.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 72/129 (55%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHP 53
N+ YV+LSN Y+A + + + A +R V+ + + KTP C+ E+ +SHP
Sbjct: 555 QNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHP 614
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
I L+ L +M + G+ T ALHDVE+E+K+ ++ HS + AI FG I++ G
Sbjct: 615 QATAIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSEKLAIAFGLITSEPG 674
Query: 114 RTIRLINNL 122
IR+I NL
Sbjct: 675 TEIRIIKNL 683
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA R+W+ ++R + +GMKK P + E+ KSH I
Sbjct: 434 YVLLSNIYAKLRQWEKKTKVREMMDMRGMKKVPGSTMIEVNNEMYEFVAGDKSHDQYKEI 493
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E + ++ +++ GYVPTT + L D+++E K++ L+ HS + AI F ++TP G +IR+
Sbjct: 494 YEMVDEMGREIKKAGYVPTTSQVLLDIDEEDKEDALYRHSEKLAIAFALLNTPPGTSIRI 553
Query: 119 INNL 122
+ NL
Sbjct: 554 VKNL 557
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
I N YVILSN YA+A RW+D + LR + K + K P S E+ +
Sbjct: 666 IEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHASDR 725
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP R I +K+L ++ GYVP LHDV++EQK+ +L HS + A+ FG I++
Sbjct: 726 SHPRREEICMKVKELSTSFKEVGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLIAS 785
Query: 111 PDGRTIRLINNL 122
P IR+I NL
Sbjct: 786 PASVPIRVIKNL 797
>gi|302800080|ref|XP_002981798.1| hypothetical protein SELMODRAFT_115031 [Selaginella moellendorffii]
gi|300150630|gb|EFJ17280.1| hypothetical protein SELMODRAFT_115031 [Selaginella moellendorffii]
Length = 483
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 71/132 (53%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
+N N YV+LS+ +A ++ A+LR + KK P SW EIK
Sbjct: 309 LNRRNSASYVLLSDIHAVCGKFDAAAKLRRRIGRDCGKKVPGLSWIEIKDKVHKFASGSR 368
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
+HP I L+ L M + GYVP T+ L DVE+E+K+ +L YHS + A+ FG IST
Sbjct: 369 THPRNDEIFAELQRLGVLMREAGYVPDTEVVLMDVEEEEKEQVLCYHSEKQAMAFGLIST 428
Query: 111 PDGRTIRLINNL 122
P G +R++ NL
Sbjct: 429 PSGTPLRVVKNL 440
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 72/125 (57%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
Y++LSN YA+ RWKD A +R +++K +KK SW EI ++HP I
Sbjct: 528 YIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDI 587
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRT-IR 117
E L L ++++EG+ P T LHDV +++K + +HS + A+ FG I P+G + IR
Sbjct: 588 YEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIR 647
Query: 118 LINNL 122
+I N+
Sbjct: 648 IIKNI 652
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 72/125 (57%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
Y++LSN YA+ RWKD A +R +++K +KK SW EI ++HP I
Sbjct: 528 YIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDI 587
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRT-IR 117
E L L ++++EG+ P T LHDV +++K + +HS + A+ FG I P+G + IR
Sbjct: 588 YEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIR 647
Query: 118 LINNL 122
+I N+
Sbjct: 648 IIKNI 652
>gi|190612669|gb|ACE80712.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 64/116 (55%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRINEALKDLF 66
A W+ R++ +++G K P CSW E+ S HP I+E L+ L
Sbjct: 1 AGGGEWECCKRVQEMRKSRGAHKLPGCSWIEVDSQVHSFIVDDQVHPQIGEIHEELQRLL 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
E+M + GYVP T+ LHD+E+++K L +HS + AI G ISTP G TIR+ NL
Sbjct: 61 EQMVEAGYVPDTRSVLHDLEEDEKVAHLSHHSEKLAIAXGLISTPPGTTIRIYKNL 116
>gi|383164843|gb|AFG65217.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
Length = 136
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 66/106 (62%), Gaps = 11/106 (10%)
Query: 28 RLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRINEALKDLFERMEQEGYVP 76
R+R ++++G++K P SW E+K SHP I L+ L E++++ GY+P
Sbjct: 1 RMRQMMKSRGIQKKPGYSWIEVKNKVHSFMVNDRSHPQTEEIYTTLESLTEQIKEVGYMP 60
Query: 77 TTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
T LHD+E+E K+++L YHS + AI FG ISTP G +IR++ NL
Sbjct: 61 DTNFVLHDLEEEHKEHVLCYHSEKLAIAFGIISTPPGSSIRIVKNL 106
>gi|358345880|ref|XP_003637002.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502937|gb|AES84140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 242
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 66/115 (57%), Gaps = 11/115 (9%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTE-----------IK 50
+ +N Y +LSN YA ARRWKD AR+R ++ G+KK P SW + +
Sbjct: 83 LKADNDGTYTLLSNIYANARRWKDVARIRYLMKRTGIKKRPGWSWVQGRKGMETFYVGDR 142
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVF 105
+H +I E L DL +R++ GYVP T ALHDV+DE+K + L HS + A+ +
Sbjct: 143 THSQSQKIYETLADLIQRIKAIGYVPQTNFALHDVDDEEKGDQLLEHSEKLALAY 197
>gi|383164869|gb|AFG65230.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
Length = 136
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 66/106 (62%), Gaps = 11/106 (10%)
Query: 28 RLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRINEALKDLFERMEQEGYVP 76
R+R ++++G++K P SW E+K SHP I L+ L E++++ GY+P
Sbjct: 1 RMRQMMKSRGIQKKPGYSWIEVKNRVHSFMVNDRSHPQTEEIYTTLESLAEQIKEVGYMP 60
Query: 77 TTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
T LHD+E+E K+++L YHS + AI FG ISTP G +IR++ NL
Sbjct: 61 DTNFVLHDLEEEHKEHVLCYHSEKLAIAFGIISTPPGSSIRIVKNL 106
>gi|361066847|gb|AEW07735.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164845|gb|AFG65218.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164849|gb|AFG65220.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164851|gb|AFG65221.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164853|gb|AFG65222.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164855|gb|AFG65223.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164859|gb|AFG65225.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164861|gb|AFG65226.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164863|gb|AFG65227.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164865|gb|AFG65228.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164867|gb|AFG65229.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
Length = 136
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 66/106 (62%), Gaps = 11/106 (10%)
Query: 28 RLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRINEALKDLFERMEQEGYVP 76
R+R ++++G++K P SW E+K SHP I L+ L E++++ GY+P
Sbjct: 1 RMRQMMKSRGIQKKPGYSWIEVKNRVHSFMVNDRSHPQTEEIYTTLESLTEQIKEVGYMP 60
Query: 77 TTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
T LHD+E+E K+++L YHS + AI FG ISTP G +IR++ NL
Sbjct: 61 DTNFVLHDLEEEHKEHVLCYHSEKLAIAFGIISTPPGSSIRIVKNL 106
>gi|357477567|ref|XP_003609069.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510124|gb|AES91266.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 611
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 71/130 (54%), Gaps = 12/130 (9%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRL----RINE 60
NN +V+LSN YA A +WKD A +R ++ + MKK P S EI Y + NE
Sbjct: 439 NNSGDHVLLSNVYAVAGKWKDVAGIRRTMIEQSMKKIPGWSMIEIDKVNYGFVAGEKPNE 498
Query: 61 ALKDLFERM--------EQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPD 112
K+ +++ E+EGY P + LHDVE+E+K++ + HS + A FG P
Sbjct: 499 VTKEAHDKLREIMLRLREEEGYAPQVRSVLHDVEEEEKEDSMSKHSEKLAAAFGIAKLPK 558
Query: 113 GRTIRLINNL 122
GR +R++ NL
Sbjct: 559 GRILRIVKNL 568
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 68/125 (54%), Gaps = 11/125 (8%)
Query: 9 VYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLR 57
++V+LSN YA+A RW D A++R+ ++ KG K P S EI +SHP
Sbjct: 678 IHVLLSNIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTH 737
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I LK++ R+ GYVP L DV +++K+ LL HS + AI F IST G IR
Sbjct: 738 IEPMLKEICCRLRDIGYVPDLTNVLLDVNEKEKEYLLSRHSEKLAIAFALISTGQGMPIR 797
Query: 118 LINNL 122
+ NL
Sbjct: 798 VAKNL 802
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 72/123 (58%), Gaps = 11/123 (8%)
Query: 11 VILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRIN 59
++LSN YA+A RW+D A++R ++ G+KK PACSW EI ++HP I
Sbjct: 496 MLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIR 555
Query: 60 EALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLI 119
+++ ++++ GYVP T L V+ ++++ L YHS + A+ F ++TP G IR+
Sbjct: 556 GKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIK 615
Query: 120 NNL 122
N+
Sbjct: 616 KNI 618
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 71/131 (54%), Gaps = 11/131 (8%)
Query: 3 NLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------S 51
L N +Y++LSN YAA W + AR+R ++ G++K P CS EI S
Sbjct: 719 GLANSGMYILLSNIYAAVGNWGEVARVRSMMKASGIQKEPGCSSIEIDREVYEFVAGDMS 778
Query: 52 HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTP 111
HP I L + +++ G+VP T+ LHD+++ K+ L HS + A+ FG IST
Sbjct: 779 HPRTDEIYVMLDKMNGLVKEHGHVPQTELVLHDLDEATKEKALAVHSEKLALAFGLISTQ 838
Query: 112 DGRTIRLINNL 122
G TI+++ NL
Sbjct: 839 PGATIKIVKNL 849
>gi|302768253|ref|XP_002967546.1| hypothetical protein SELMODRAFT_88678 [Selaginella moellendorffii]
gi|300164284|gb|EFJ30893.1| hypothetical protein SELMODRAFT_88678 [Selaginella moellendorffii]
Length = 281
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 71/132 (53%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
+N N YV+LS+ +A ++ A+LR + KK P SW EIK
Sbjct: 107 LNRRNSASYVLLSDIHAVCGKFDAAAKLRRRIGRDCGKKVPGLSWIEIKDKVHKFASGSR 166
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
+HP I L+ L M + GYVP T+ L DVE+E+K+ +L YHS + A+ FG IST
Sbjct: 167 THPRNDEIFAELQRLGVLMREAGYVPDTEVVLMDVEEEEKEQVLCYHSEKQAMAFGLIST 226
Query: 111 PDGRTIRLINNL 122
P G +R++ NL
Sbjct: 227 PSGTPLRVVKNL 238
>gi|302805647|ref|XP_002984574.1| hypothetical protein SELMODRAFT_120669 [Selaginella moellendorffii]
gi|300147556|gb|EFJ14219.1| hypothetical protein SELMODRAFT_120669 [Selaginella moellendorffii]
Length = 369
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 46/124 (37%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+L++ Y AA +W++ AR+R + +G++K P S E++ SH I
Sbjct: 203 YVVLASIYRAAGKWEEAARIRSLMVERGVRKDPGRSAIEVEGRVFEFVAGDMSHVQMNPI 262
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L++L M++ GYVP T LHDV +E+K+ +L +HS + A+ FG ++TP G IR+
Sbjct: 263 RAKLQELSSAMKKAGYVPDTSLVLHDVAEEEKEQVLLWHSEKLAVAFGLLNTPAGSPIRV 322
Query: 119 INNL 122
I NL
Sbjct: 323 IKNL 326
>gi|225463123|ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Vitis vinifera]
Length = 573
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 74/129 (57%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHP 53
N+ +V+LSN YAA RW+D R+R +++++ ++K P S+ E+ +SHP
Sbjct: 402 NSCGDFVLLSNVYAARERWEDVGRVREAMKSRDVRKVPGFSYIEVEGVIHKFVNGDQSHP 461
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
I L ++ R++ GYV T LHD+ +E K+N L +HS + A+ FG IST +G
Sbjct: 462 DWREIYAKLDEIRFRIKAFGYVAETSLVLHDIGEEDKENALCHHSEKLAVAFGLISTSEG 521
Query: 114 RTIRLINNL 122
IR+ NL
Sbjct: 522 TPIRVNKNL 530
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 74/125 (59%), Gaps = 11/125 (8%)
Query: 9 VYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLR 57
++V+LSN YA+A +W D AR+R+ ++ KG +K S E+ +SH +
Sbjct: 661 IHVLLSNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQ 720
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I L+++ R+ Q GYVP T L DV++++K++LL HS + A+ +G I+T G IR
Sbjct: 721 IGLMLQEINCRISQVGYVPDTTNVLVDVDEQEKEHLLSRHSEKLAMAYGLINTGKGIPIR 780
Query: 118 LINNL 122
++ NL
Sbjct: 781 VVKNL 785
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 16/129 (12%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA A RW++ +R +++KG+KK P S E+ +SHP I
Sbjct: 515 YVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEI 574
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPD-----G 113
L L ++M++ GYVP ++ ALHDVE+E K+ L HS + AIVF ++T +
Sbjct: 575 YRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSN 634
Query: 114 RTIRLINNL 122
TIR+ NL
Sbjct: 635 NTIRITKNL 643
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 70/123 (56%), Gaps = 11/123 (8%)
Query: 11 VILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRIN 59
V+L N YA+ +W AR+R+ ++ G+KK PACSW E++ +HP I
Sbjct: 459 VLLYNIYASTGQWDAAARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQAEEIY 518
Query: 60 EALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLI 119
+ ++ +++ +EGYVP L V+D++K+ L YHS + A+ F I P G TIR++
Sbjct: 519 KMWGEISKKIRKEGYVPDMDYVLLHVDDQEKEANLQYHSEKLALAFALIEMPAGATIRIM 578
Query: 120 NNL 122
N+
Sbjct: 579 KNI 581
>gi|115470801|ref|NP_001058999.1| Os07g0172600 [Oryza sativa Japonica Group]
gi|34394447|dbj|BAC83621.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113610535|dbj|BAF20913.1| Os07g0172600 [Oryza sativa Japonica Group]
Length = 872
Score = 88.6 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWT-----------EIKSHPYRLRI 58
YV+ SN Y+ + RW+ + R+ +R KGM+K PA SWT +SHP I
Sbjct: 708 YVLASNLYSESARWQCSESTRLKMREKGMRKIPARSWTFHGNSIHSFFARDRSHPQSKDI 767
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L L + GY P T LHDVE+ QK++ L YHS + A ++G + + G TIR+
Sbjct: 768 YAGLDVLILECMKAGYEPDTTFVLHDVEEYQKRHFLMYHSVKLAAMYGLLMSGHGETIRV 827
Query: 119 INNL 122
+ N+
Sbjct: 828 VKNV 831
>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
Length = 908
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+ SN A +W+D ++R + +KK PACSW ++K SHP I
Sbjct: 742 YVLYSNICATTGKWEDVEKIRRQMGLNKIKKKPACSWVKLKNKLSLFGMGDHSHPQASEI 801
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L++L + +++ GY+P AL D ++EQK++ L HS R A+ +G IS+P+G T+++
Sbjct: 802 YAKLEELKKMIKEAGYIPDISYALQDTDEEQKEHNLWNHSERLALAYGLISSPEGSTLKI 861
Query: 119 INNL 122
NL
Sbjct: 862 FKNL 865
>gi|125599274|gb|EAZ38850.1| hypothetical protein OsJ_23267 [Oryza sativa Japonica Group]
Length = 872
Score = 88.6 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWT-----------EIKSHPYRLRI 58
YV+ SN Y+ + RW+ + R+ +R KGM+K PA SWT +SHP I
Sbjct: 708 YVLASNLYSESARWQCSESTRLKMREKGMRKIPARSWTFHGNSIHSFFARDRSHPQSKDI 767
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L L + GY P T LHDVE+ QK++ L YHS + A ++G + + G TIR+
Sbjct: 768 YAGLDVLILECMKAGYEPDTTFVLHDVEEYQKRHFLMYHSVKLAAMYGLLMSGHGETIRV 827
Query: 119 INNL 122
+ N+
Sbjct: 828 VKNV 831
>gi|125557391|gb|EAZ02927.1| hypothetical protein OsI_25067 [Oryza sativa Indica Group]
Length = 678
Score = 88.6 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWT-----------EIKSHPYRLRI 58
YV+ SN Y+ + RW+ + R+ +R KGM+K PA SWT +SHP I
Sbjct: 514 YVLASNLYSESARWQCSESTRLKMREKGMRKIPARSWTFHGNSIHSFFARDRSHPQSKDI 573
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L L + GY P T LHDVE+ QK++ L YHS + A ++G + + G TIR+
Sbjct: 574 YAGLDVLILECMKAGYEPDTTFVLHDVEEYQKRHFLMYHSVKLAAMYGLLMSGHGETIRV 633
Query: 119 INNL 122
+ N+
Sbjct: 634 VKNV 637
>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
Length = 854
Score = 88.6 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+L N Y+AA +W A +R +R +G+ K P CSW E+ +HP +
Sbjct: 688 YVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEV 747
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ ++ L+ M GY P T LHD++D K +L HS + AI FG + G TIR+
Sbjct: 748 HAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRV 807
Query: 119 INNL 122
NL
Sbjct: 808 AKNL 811
>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
Length = 854
Score = 88.6 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+L N Y+AA +W A +R +R +G+ K P CSW E+ +HP +
Sbjct: 688 YVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEV 747
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ ++ L+ M GY P T LHD++D K +L HS + AI FG + G TIR+
Sbjct: 748 HAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRV 807
Query: 119 INNL 122
NL
Sbjct: 808 AKNL 811
>gi|190612975|gb|ACE80865.1| pentatricopeptide repeat protein [Cyathea smithii]
Length = 153
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 63/116 (54%), Gaps = 12/116 (10%)
Query: 19 AARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRINEALKDLFE 67
A RW D ARLR + G+K+ P CS EI +SHP ++ L +L +
Sbjct: 2 ATGRWDDAARLRTLMVQHGVKQQPGCSSIEIGSEIHSFVVGDQSHPQTEKVYAELGNLSK 61
Query: 68 RMEQEGYVPT-TKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
ME+ GY P TK LHDVE+E+KK L+ HS AI FG ISTP G + + NL
Sbjct: 62 LMEEAGYEPADTKLVLHDVEEERKKESLYCHSEELAIAFGLISTPSGEGLHITKNL 117
>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
Length = 856
Score = 88.6 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+L N Y+AA +W A +R +R +G+ K P CSW E+ +HP +
Sbjct: 690 YVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEV 749
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ ++ L+ M GY P T LHD++D K +L HS + AI FG + G TIR+
Sbjct: 750 HAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRV 809
Query: 119 INNL 122
NL
Sbjct: 810 AKNL 813
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV LSN YA++ W A++RV +R KG+ K S EI K+HP I
Sbjct: 580 YVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEI 639
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E ++DL R+++ G+VP T+ LHD+ E+ + L HS R AI +G ISTP G T+R+
Sbjct: 640 FEEVEDLERRLKEAGFVPHTESVLHDLNYEETEETLCNHSERLAIAYGLISTPPGTTLRI 699
Query: 119 INNL 122
NL
Sbjct: 700 TKNL 703
>gi|125599128|gb|EAZ38704.1| hypothetical protein OsJ_23104 [Oryza sativa Japonica Group]
Length = 1280
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YAA W D LR ++ ++K P S E++ SHP +I
Sbjct: 1114 YVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLVELRNSVYEFVMGDRSHPESEQI 1173
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L ++ ER+ +EGY+P T L D+E+E+K+ L+YHS R AI F + + G IR+
Sbjct: 1174 YEMLAEIAERLRREGYIPRTSNVLADIEEEEKETALNYHSERLAIAFALLKSLPGIPIRI 1233
Query: 119 INNL 122
I NL
Sbjct: 1234 IKNL 1237
>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
Length = 592
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YAA W D LR ++ ++K P S E++ SHP +I
Sbjct: 426 YVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLVELRNSVYEFVMGDRSHPESEQI 485
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L ++ ER+ +EGY+P T L D+E+E+K+ L+YHS R AI F + + G IR+
Sbjct: 486 YEMLAEIAERLRREGYIPRTSNVLADIEEEEKETALNYHSERLAIAFALLKSLPGIPIRI 545
Query: 119 INNL 122
I NL
Sbjct: 546 IKNL 549
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS---------- 51
I N YV+LSN YA A RW + A+ R + +KGMKK P CS EI S
Sbjct: 536 IEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDK 595
Query: 52 -HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
HP I L+++ +E+ G+VP T E L ++E+E K+ L +HS + AI FG IST
Sbjct: 596 LHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIST 655
Query: 111 PDGRTIRLINNL 122
G + ++ NL
Sbjct: 656 KPGTKLTIVKNL 667
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 72/129 (55%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHP 53
+N VYV LSN YA A RW D+ ++R + +KG+KK S EI +HP
Sbjct: 719 SNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHP 778
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
I+ L+ L + M++ GY P + LHDV++ QK+ L +HS + AI +G + TP G
Sbjct: 779 EIDSIHAELEMLTKEMKEAGYTPDMRFVLHDVDEVQKERALCHHSEKLAIAYGLLKTPPG 838
Query: 114 RTIRLINNL 122
IR++ NL
Sbjct: 839 TPIRIMKNL 847
>gi|302790766|ref|XP_002977150.1| hypothetical protein SELMODRAFT_53291 [Selaginella moellendorffii]
gi|300155126|gb|EFJ21759.1| hypothetical protein SELMODRAFT_53291 [Selaginella moellendorffii]
Length = 287
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
Y++LSN Y++ R + R R ++R +G+ K P S E+K HP RI
Sbjct: 121 YILLSNLYSSTGRMDEARRTRKAMRLRGITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRI 180
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ ++ L R+++ GYV + L DVE+E+K+ LL YHS R AI FG ISTP G + +
Sbjct: 181 HAEIERLKARVKEAGYVADVRAVLRDVEEEEKEQLLWYHSERLAIAFGLISTPPGTALHI 240
Query: 119 INNL 122
+ NL
Sbjct: 241 VKNL 244
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 72/123 (58%), Gaps = 11/123 (8%)
Query: 11 VILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRIN 59
V++SN YA+A RW D A +R +++++G+ K P S E+ + HP ++
Sbjct: 636 VLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKVY 695
Query: 60 EALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLI 119
E + ++ E++E GY P LH+++ E+K + L+YHS + A+ +G IST G IR++
Sbjct: 696 EMIDEMREKLEDAGYTPDVSCVLHNIDKEKKVSALNYHSEKLAMAYGLISTAPGVPIRIV 755
Query: 120 NNL 122
NL
Sbjct: 756 KNL 758
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHP 53
N+ YV+LSN +A A W++ A +R + + +KK CSW EIK SHP
Sbjct: 707 NDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHP 766
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+ + L++L +++ GY P T HDVE+E K+ +L HS R AI +G I+ P G
Sbjct: 767 FSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPG 826
Query: 114 RTIRLINNL 122
I++ NL
Sbjct: 827 APIQIEKNL 835
>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
Length = 600
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
Y++LSN Y++ R + R R ++R +G+ K P S E+K HP RI
Sbjct: 434 YILLSNLYSSTGRMDEARRTRKAMRLRGITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRI 493
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ ++ L R+++ GYV + L DVE+E+K+ LL YHS R AI FG ISTP G + +
Sbjct: 494 HAEIERLKARVKEAGYVADVRAVLRDVEEEEKEQLLWYHSERLAIAFGLISTPPGTALHI 553
Query: 119 INNL 122
+ NL
Sbjct: 554 VKNL 557
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 72/127 (56%), Gaps = 14/127 (11%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA A RW++ +R +++KG+KK P S E+ +SHP I
Sbjct: 516 YVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEI 575
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPD---GRT 115
L L ++M++ GYVP ++ ALHDVE+E K+ L HS + AIVF ++T +
Sbjct: 576 YRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTEEEDSNNA 635
Query: 116 IRLINNL 122
IR+ NL
Sbjct: 636 IRITKNL 642
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 45/128 (35%), Positives = 74/128 (57%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPY 54
N YV+LSN Y + +++ + A +R +++ + KTP C+ EI ++HP
Sbjct: 626 NTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHVFMAGDRAHPQ 685
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
I L+ L +M + GY P T+ AL+DVE+E+K++++ HS + AI FG ++T G
Sbjct: 686 SDAIYLYLEKLTAKMIEAGYRPDTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLNTEPGT 745
Query: 115 TIRLINNL 122
IR+I NL
Sbjct: 746 EIRIIKNL 753
>gi|302793743|ref|XP_002978636.1| hypothetical protein SELMODRAFT_109283 [Selaginella moellendorffii]
gi|300153445|gb|EFJ20083.1| hypothetical protein SELMODRAFT_109283 [Selaginella moellendorffii]
Length = 438
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+L++ Y AA +W++ AR+R + +G++K P S E++ SH I
Sbjct: 272 YVVLASIYRAAGKWEEAARIRSLMVERGVRKDPGRSAIEVEGRVFEFVAGDMSHVQMNPI 331
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L++L M++ GYVP T LHDV +E+K+ +L +HS + A+ FG ++TP G IR+
Sbjct: 332 RAKLQELSSAMKEAGYVPDTSLVLHDVAEEEKEQVLLWHSEKLAVAFGLLNTPAGSPIRV 391
Query: 119 INNL 122
I NL
Sbjct: 392 IKNL 395
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+ SN A+ RRW+D +R + + +KK PACSW ++K+ HP I
Sbjct: 768 YVLYSNVCASTRRWRDVENVRKQMESHNIKKKPACSWVKLKNQVTTFGMGDQYHPQNAEI 827
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L++L + + + GY+P T +L D ++EQK++ L HS R A+ FG I++ +G +R+
Sbjct: 828 YAKLEELKKIIREAGYMPDTSYSLQDTDEEQKEHNLWNHSERIALAFGLINSSEGSPLRI 887
Query: 119 INNL 122
NL
Sbjct: 888 FKNL 891
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHP 53
N+ YV+LSN +A A W++ A +R + + +KK CSW EIK SHP
Sbjct: 707 NDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHP 766
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+ + L++L +++ GY P T HDVE+E K+ +L HS R AI +G I+ P G
Sbjct: 767 FSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPG 826
Query: 114 RTIRLINNL 122
I++ NL
Sbjct: 827 APIQIEKNL 835
>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 73/129 (56%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HP 53
N+ VYV+LSN +A +R W+ A++R + N+G+KK P SW I++ HP
Sbjct: 539 NDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHP 598
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
I +K++ +++ GY P A HDV++EQ+++ L YHS + A+ +G I TP+
Sbjct: 599 EITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEK 658
Query: 114 RTIRLINNL 122
+ + N+
Sbjct: 659 SPLYVTKNV 667
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 11/125 (8%)
Query: 9 VYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLR 57
VY+ LSN YA A RW D+ ++R + ++G+KK S EI +HP
Sbjct: 701 VYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDA 760
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I+ L+ L + M++ GY P + LHDV+D QK+ L +HS + AI +G + TP G IR
Sbjct: 761 IHAELETLTKEMKEAGYTPDMRFVLHDVDDVQKEKALCHHSEKLAIAYGLLKTPSGTPIR 820
Query: 118 LINNL 122
++ NL
Sbjct: 821 IMKNL 825
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YVI SN A +W D LR ++ +KG K P CS E+ + H +
Sbjct: 419 YVIFSNLCARYGKWDDVNHLRKTMIDKGAVKIPGCSSIEVNNVVHEFFAGEGVHSTSTTL 478
Query: 59 NEALKDLFERMEQEGYVPTTKEALH-DVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
+ AL +L + ++ GYVP T + D+EDE+K+ +L YHS + AI FG ++TP G TIR
Sbjct: 479 HRALDELVKELKSAGYVPDTSLVFYADMEDEEKEIILRYHSEKLAITFGLLNTPPGTTIR 538
Query: 118 LINNL 122
++ NL
Sbjct: 539 VVKNL 543
>gi|302773103|ref|XP_002969969.1| hypothetical protein SELMODRAFT_92492 [Selaginella moellendorffii]
gi|300162480|gb|EFJ29093.1| hypothetical protein SELMODRAFT_92492 [Selaginella moellendorffii]
Length = 331
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YAA RW D AR+R + +KG+KK S E+ ++HP R I
Sbjct: 165 YVLLSNIYAARDRWDDVARIRKLMADKGVKKPSGRSSIEVGDKVHEFVAGDRAHPRREEI 224
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L L +M+ GY+ AL D E+E+K+ +L YHS + AI FG+++TP +++ +
Sbjct: 225 YQELSRLGSQMKALGYIQDRSSALRDGEEEEKEQMLWYHSEKLAIAFGSVATPARKSLYV 284
Query: 119 INNL 122
I NL
Sbjct: 285 IKNL 288
>gi|356570245|ref|XP_003553300.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g26782, mitochondrial-like [Glycine max]
Length = 555
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 44/132 (33%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
++ +N YV+LSN YA A RW + R+R+ ++++G+ K P S E+K
Sbjct: 381 LDXSNCGYYVLLSNIYADAGRWDEVERMRILMKSRGLLKAPGFSIVELKGRIHVLLVGDK 440
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
HP +I E L ++++ GY+P LHDV++E+K +L HS + A+ FG +++
Sbjct: 441 EHPQHEKIYEYLDKXNVKLQELGYMPNXNMVLHDVDEEEKGMVLRVHSEKLAVAFGIMNS 500
Query: 111 PDGRTIRLINNL 122
G I +I NL
Sbjct: 501 VPGSIIHIIKNL 512
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 70/128 (54%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPY 54
N VYV+L N YAA RW+ +R + ++G+KKTP CS E+ + HP
Sbjct: 554 NGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQ 613
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
I L ++ ++ GY P T E D+ +E+K++ ++ HS + AI FG IS+ G
Sbjct: 614 SKEIYSKLDEMSVDLKFAGYSPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSGPGV 673
Query: 115 TIRLINNL 122
TIR++ NL
Sbjct: 674 TIRIVKNL 681
>gi|115476560|ref|NP_001061876.1| Os08g0434000 [Oryza sativa Japonica Group]
gi|42407498|dbj|BAD10615.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|42409483|dbj|BAD09839.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623845|dbj|BAF23790.1| Os08g0434000 [Oryza sativa Japonica Group]
Length = 601
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+L N YAA W A +R ++ KG++ TP C+ E+ SHP + I
Sbjct: 435 YVLLLNTYAAVEDWGKVAEVRKLMKEKGIQTTPGCTTVELNGEIHEFIAADASHPRKAEI 494
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L ++ + + GYVP LHD++ E K+ L YHS + AI F + TP R IRL
Sbjct: 495 YEKLDEINKHLRIAGYVPNVSSELHDLDSEGKECALAYHSEKLAIAFALLVTPQHRPIRL 554
Query: 119 INNL 122
NL
Sbjct: 555 AKNL 558
>gi|115469684|ref|NP_001058441.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|53791823|dbj|BAD53889.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|53792844|dbj|BAD53877.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113596481|dbj|BAF20355.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|125598347|gb|EAZ38127.1| hypothetical protein OsJ_22476 [Oryza sativa Japonica Group]
Length = 648
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 74/125 (59%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK------------SHPYRLR 57
YV+LSN A+A +W++ +++R+ +R + +KK PA S E + +HP
Sbjct: 481 YVLLSNILASAGKWEEVSKVRILMRKQRLKKDPAVSLFEGRDGLVHQFFAGDNAHPRTHE 540
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I +AL +L +++ EGYVP ++DV DE+K+ LL HS + A+ FG ++ G TIR
Sbjct: 541 IKKALLELVAKLKLEGYVPILSSIVYDVNDEEKERLLMGHSEKLALSFGLLTLGSGCTIR 600
Query: 118 LINNL 122
+I NL
Sbjct: 601 IIKNL 605
>gi|297743485|emb|CBI36352.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 70/128 (54%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPY 54
N VYV+L N YAA RW+ +R + ++G+KKTP CS E+ + HP
Sbjct: 435 NGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQ 494
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
I L ++ ++ GY P T E D+ +E+K++ ++ HS + AI FG IS+ G
Sbjct: 495 SKEIYSKLDEMSVDLKFAGYSPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSGPGV 554
Query: 115 TIRLINNL 122
TIR++ NL
Sbjct: 555 TIRIVKNL 562
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
Y ++SN +AA RW D +R+ ++ G+KK P CSW E+ KSHP I
Sbjct: 756 YALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDI 815
Query: 59 NEALKDLFERMEQEG-YVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
L + + ++G Y+ TK H+V +E+K +L+ HS R A+ +G + TP G +IR
Sbjct: 816 YLKLAQFTKLLGKKGGYIAQTKFVFHNVSEEEKTQMLYRHSERLALGYGLLVTPKGTSIR 875
Query: 118 LINNL 122
+ NL
Sbjct: 876 ITKNL 880
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+LSN YA+A R D A++R ++ G+KK PACSW EI+ SHP R I
Sbjct: 512 HVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEI 571
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ + ++++ GYVP T L + + ++ L YHS + A+ F + TP G TIR+
Sbjct: 572 QRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRI 631
Query: 119 INNL 122
N+
Sbjct: 632 KKNI 635
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 66/124 (53%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+LSN YA A WKD +R +++ G+KK P S E+ HP I
Sbjct: 512 YVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNI 571
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L L +M++ GY+P T+ ALHDVE E K+ L HS + AIVF ++T G IR+
Sbjct: 572 YGELDVLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRI 631
Query: 119 INNL 122
NL
Sbjct: 632 TKNL 635
>gi|357450099|ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484374|gb|AES65577.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 740
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA+ R D R+R +++ G+ K P S EIK SHP+ I
Sbjct: 574 YVLLSNMYASVGRVNDVKRVRKLMKHHGVNKLPGFSLVEIKGAMHEFLTGDRSHPFSKEI 633
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ ++ R+E+ G+ T EAL D+E+E K+ +L YHS R AI F I++P IR+
Sbjct: 634 YLKIAEINSRLEEYGHKARTSEALFDLEEEDKEGVLSYHSERLAIAFALIASPSSLAIRI 693
Query: 119 INNL 122
I NL
Sbjct: 694 IKNL 697
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 66/124 (53%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+LSN YA A WKD +R +++ G+KK P S E+ HP I
Sbjct: 512 YVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNI 571
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L L +M++ GY+P T+ ALHDVE E K+ L HS + AIVF ++T G IR+
Sbjct: 572 YGELDVLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRI 631
Query: 119 INNL 122
NL
Sbjct: 632 TKNL 635
>gi|222640613|gb|EEE68745.1| hypothetical protein OsJ_27435 [Oryza sativa Japonica Group]
Length = 461
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+L N YAA W A +R ++ KG++ TP C+ E+ SHP + I
Sbjct: 250 YVLLLNTYAAVEDWGKVAEVRKLMKEKGIQTTPGCTTVELNGEIHEFIAADASHPRKAEI 309
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L ++ + + GYVP LHD++ E K+ L YHS + AI F + TP R IRL
Sbjct: 310 YEKLDEINKHLRIAGYVPNVSSELHDLDSEGKECALAYHSEKLAIAFALLVTPQHRPIRL 369
Query: 119 INNL 122
NL
Sbjct: 370 AKNL 373
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 16/129 (12%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA A RW++ +R +++KG+KK P S E+ +SHP I
Sbjct: 515 YVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEI 574
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPD-----G 113
L L ++M++ GYVP ++ ALHDVE+E K+ L HS + AIVF ++T +
Sbjct: 575 YRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSN 634
Query: 114 RTIRLINNL 122
TIR+ NL
Sbjct: 635 NTIRITKNL 643
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 71/123 (57%), Gaps = 11/123 (8%)
Query: 11 VILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRIN 59
V+L N YA+ +W D AR+R ++ G+KK PACSW EI+ +HP I
Sbjct: 470 VLLYNIYASTGQWDDAARVRKMMKATGVKKEPACSWVEIENSVHMFVADDSTHPKSEEIY 529
Query: 60 EALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLI 119
+++ R+++ GYVP T L +++++++ L YHS + A+ F I+ P G TIR++
Sbjct: 530 RMWEEVNTRIKKAGYVPNTDYVLLHIKEQERETKLQYHSEKIALAFALINMPAGATIRIM 589
Query: 120 NNL 122
N+
Sbjct: 590 KNI 592
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+LSN YA+A R D A++R ++ G+KK PACSW EI+ SHP R I
Sbjct: 511 HVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEI 570
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ + ++++ GYVP T L + + ++ L YHS + A+ F + TP G TIR+
Sbjct: 571 QRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRI 630
Query: 119 INNL 122
N+
Sbjct: 631 KKNI 634
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 76/132 (57%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS---------- 51
+N ++ YV+LSN YA+A +WKD A +R ++++G++KTP CS E+
Sbjct: 520 LNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLIELDGVVFEFFAEDS 579
Query: 52 -HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
HP I + ++++ R++ GYVP T + +VE+ +K+ + +HS + AI FG +
Sbjct: 580 DHPELREIYQKVEEMIGRIKVAGYVPNTADVRLEVEEREKEVSVSHHSEKLAIAFGLMKL 639
Query: 111 PDGRTIRLINNL 122
G TIRL NL
Sbjct: 640 DPGATIRLSKNL 651
>gi|358357206|gb|AEU08443.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRINEALKDLF 66
AA RW D A+LR + ++ ++K P CS E+ K HP IN LK L
Sbjct: 1 AAVGRWDDRAKLREMMEDRVVEKEPGCSRIEVGDRVHTFIVEDKLHPQIEEINAELKRLA 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
+M++ G V T+ LHDVE+EQK+ L +HS R AI FG ISTP G IR+I NL
Sbjct: 61 GQMKEVGCVLDTRFVLHDVEEEQKQFSLWHHSERLAIAFGLISTPQGTPIRVIKNL 116
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 71/132 (53%), Gaps = 12/132 (9%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
+N ++ +V+L+N YA A W A++R + G++KTP CS EI
Sbjct: 531 LNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTT 590
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP +I L+ L + + GYVP T ++HDVED+ K LL+ HS + AI FG ++T
Sbjct: 591 SHPQSKKIYSYLETLVDEIRAAGYVPDT-NSIHDVEDDVKVQLLNTHSEKLAIAFGLLNT 649
Query: 111 PDGRTIRLINNL 122
G I + NL
Sbjct: 650 STGTPIHIRKNL 661
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 69/128 (53%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRLR-------- 57
N V+ SN YA+A+RW D +R ++ + GMKK P SW E+ + +
Sbjct: 575 NCGYSVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKACTQ 634
Query: 58 ---INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+ E + ++ ++ + GY P T L ++++E+K++ L YHS + A FG IST G
Sbjct: 635 TTKVYEMVTEMCIKLRESGYTPNTAAVLLNIDEEEKESALSYHSEKLATAFGLISTAPGT 694
Query: 115 TIRLINNL 122
IR++ NL
Sbjct: 695 PIRIVKNL 702
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
+++LSN YA+ RW A +R + G+ K P CS E+ + HP R RI
Sbjct: 463 FIMLSNFYASLGRWSYAAEVREKMEKGGIIKEPGCSSIEVNNAIHEFFSGDLRHPERKRI 522
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L++L + EGY+P T+ ALHD++DEQK+ L HS R AI +G +ST T+R+
Sbjct: 523 YKKLEELNYLTKFEGYLPATEVALHDIDDEQKELALAVHSERLAICYGLVSTEAYTTLRV 582
Query: 119 INNL 122
NL
Sbjct: 583 GKNL 586
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 72/124 (58%), Gaps = 12/124 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+L+N YA A WKD AR+R ++ KG++KTP S ++K +H + I
Sbjct: 528 HVLLANIYANASMWKDVARVRTAMEKKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDI 587
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L L E ++ GYVP T +++HDVED+ K LL+ HS + AI +G I T G TI++
Sbjct: 588 YARLAKLIEEIKDMGYVPDT-DSIHDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQI 646
Query: 119 INNL 122
NL
Sbjct: 647 KKNL 650
>gi|218200771|gb|EEC83198.1| hypothetical protein OsI_28453 [Oryza sativa Indica Group]
Length = 639
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+L N YAA+ R +R +R KG+ KTP CS EIK SHP+ I
Sbjct: 342 YVLLGNIYAASGRHASAREIRHLMREKGVDKTPGCSTVEIKGVIHQFIVGDLSHPFIEEI 401
Query: 59 NEALKDLFERME-QEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
++ R+ +EGYVP KE L D+E+E+K+N L HS + AI F I+T D IR
Sbjct: 402 LSKWDEIDSRIRLEEGYVPDKKEVLLDIEEEEKENALSRHSEKMAIAFALINTSDDMPIR 461
Query: 118 LINNL 122
++ NL
Sbjct: 462 IVKNL 466
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA+ +RW D ++R ++ +G+KKTP S E++ SHP I
Sbjct: 447 YVLLSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEI 506
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L ++ + ++ EGYVP L D+E+E+K+ L YHS + AI F I+T G IR+
Sbjct: 507 YVKLAEITKLLKLEGYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRV 566
Query: 119 INNL 122
+ NL
Sbjct: 567 VKNL 570
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 70/124 (56%), Gaps = 12/124 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA A RWK+ +R ++ K ++KTP S E+ SHP I
Sbjct: 494 YVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEI 553
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L L +M++ GYVP T ALHDVE+E K+ L HS + AIVF ++T + + IR+
Sbjct: 554 YEELGVLVAKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTQEYQ-IRI 612
Query: 119 INNL 122
NL
Sbjct: 613 TKNL 616
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
+N + + YV LSN YAA RRW+D +R V + ++K P+ S+ E+
Sbjct: 527 LNPDGVSGYVCLSNIYAAERRWEDVENVRALVAKRRLRKPPSYSFVELNKMVHQFFVGDT 586
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SH I LKDL E++++ GY P T L+DVE+E K+ +L HS R A+ F I+T
Sbjct: 587 SHEQSDDIYAKLKDLNEQLKKAGYKPDTSLVLYDVEEEIKEKMLWDHSERLALAFALINT 646
Query: 111 PDGRTIRLINNL 122
G TIR+ NL
Sbjct: 647 GPGTTIRITKNL 658
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 72/125 (57%), Gaps = 11/125 (8%)
Query: 9 VYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLR 57
V+V+LSN YA+A +W D AR+R+++R KG++K P S ++ +SHP
Sbjct: 501 VHVLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTH 560
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I L+++ R G++P L DV++++K+ LL HS + AI FG I+T IR
Sbjct: 561 IALMLQEMNCRFSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIR 620
Query: 118 LINNL 122
++ NL
Sbjct: 621 VVKNL 625
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 11/127 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPY 54
N YV+L+N YA A RW+ +L+ V +G+++ CSW E++ HP
Sbjct: 488 NTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFAENRNHPQ 547
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+RI E L D+ RM++EG+ P K AL +D L HS + A+ FG ++ GR
Sbjct: 548 GMRIAEFLDDVARRMQEEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLNLSQGR 607
Query: 115 TIRLINN 121
IR+ N
Sbjct: 608 PIRVTKN 614
>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
Length = 564
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHP 53
+N Y++LSN YA+ +W+ +++R ++ G+K P CS E+ SHP
Sbjct: 393 HNAENYILLSNLYASMSQWEKMSQVRKKMKGMGIKAVPGCSSIEVDGLVHEFVMGDWSHP 452
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+ + E L+D+ +R+ G+ P + LH+V DE+K+N L HS R AI +G + T
Sbjct: 453 EAMEVREILRDISKRVHAVGHQPGISDVLHNVVDEEKENALCEHSERLAIAYGLLKTKTP 512
Query: 114 RTIRLINNL 122
IR++ NL
Sbjct: 513 MAIRIVKNL 521
>gi|222640201|gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
Length = 983
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+L N YAA+ R +R +R KG+ KTP CS EIK SHP+ I
Sbjct: 549 YVLLGNIYAASGRHASAREIRHLMREKGVDKTPGCSTVEIKGVIHQFIVGDLSHPFIEEI 608
Query: 59 NEALKDLFERME-QEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
++ R+ +EGYVP KE L D+E+E+K+N L HS + AI F I+T D IR
Sbjct: 609 LSKWDEIDSRIRLEEGYVPDKKEVLLDIEEEEKENALSRHSEKMAIAFALINTSDDMPIR 668
Query: 118 LINNL 122
++ NL
Sbjct: 669 IVKNL 673
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 68/130 (52%), Gaps = 11/130 (8%)
Query: 4 LNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSH 52
L N YV+LSN YAA W+ A++R ++ G++K CS E+ + H
Sbjct: 473 LANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKH 532
Query: 53 PYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPD 112
P I L ++ ++ GY P T LHD+ +EQK+ L HS + AI FG IST
Sbjct: 533 PKSKEIYVMLNEINSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKP 592
Query: 113 GRTIRLINNL 122
G T++++ NL
Sbjct: 593 GTTVKIVKNL 602
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YVILSN A RW D LR + +KG K P CS E+ + H +
Sbjct: 442 YVILSNLCARNGRWDDVNHLRKMMVDKGALKVPGCSSIEVNNVVHEFFSGDGVHSTSTIL 501
Query: 59 NEALKDLFERMEQEGYVPTTKEALH-DVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
+ AL +L + ++ GYVP T + D+EDE+K+ +L YHS + AI +G ++TP G TIR
Sbjct: 502 HHALDELVKELKLAGYVPDTSLVFYADIEDEEKEIVLRYHSEKLAITYGLLNTPPGTTIR 561
Query: 118 LINNL 122
++ NL
Sbjct: 562 VVKNL 566
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 72/125 (57%), Gaps = 11/125 (8%)
Query: 9 VYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLR 57
V+V+LSN YA+A +W D AR+R+++R KG++K P S ++ +SHP
Sbjct: 669 VHVLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTH 728
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I L+++ R G++P L DV++++K+ LL HS + AI FG I+T IR
Sbjct: 729 IALMLQEMNCRFSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIR 788
Query: 118 LINNL 122
++ NL
Sbjct: 789 VVKNL 793
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+LSN YA A RW A++R + +KG+KK P CS EI S HP I
Sbjct: 506 YVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFIIGDKFHPRNREI 565
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+++ ME+ G+VP T E L ++E+E K+ L +HS + AI FG IST G + +
Sbjct: 566 YRMLEEMEMLMEETGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTI 625
Query: 119 INNL 122
+ NL
Sbjct: 626 VKNL 629
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 71/132 (53%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS---------- 51
I N YV+LSN YA A RW + A R + +KGMKK P CS EI S
Sbjct: 524 IEPENPGSYVLLSNIYATAGRWNEVANTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDK 583
Query: 52 -HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
HP I L+++ +E+ G+VP T E L ++E+E K+ L +HS + AI FG IST
Sbjct: 584 FHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIST 643
Query: 111 PDGRTIRLINNL 122
G + ++ NL
Sbjct: 644 KPGTKLTIVKNL 655
>gi|242069679|ref|XP_002450116.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
gi|241935959|gb|EES09104.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
Length = 597
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 69/112 (61%), Gaps = 11/112 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN Y+ + RW+D A+LR+ ++ KG++K PA SW E+ KSHP +I
Sbjct: 484 YVVLSNIYSNSGRWEDAAKLRLEMKAKGVEKVPASSWVELDGKVHEFHVGDKSHPLSDQI 543
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
L +L M+ GY P+T+ + D+E+E+K++ L +HS + AI F ++T
Sbjct: 544 YAKLDELGMEMKAMGYKPSTEVVMFDIENEEKEHTLVHHSEKIAIAFSLLTT 595
>gi|190612853|gb|ACE80804.1| pentatricopeptide repeat protein [Cycas revoluta]
Length = 152
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRINEALKDLF 66
AA RW D ++R + + +KK P CSW E+ SHP +I L+ L
Sbjct: 1 AATGRWDDMEKVRKLMTERRVKKIPGCSWIEVNNKVHAFLVGDTSHPQAQKIYAELERLS 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
+M++ GY+P T LHDVE+EQK+++L YHS + AI FG ++T +R++ NL
Sbjct: 61 GQMKEGGYLPNTNFVLHDVEEEQKEHILCYHSEKLAIAFGLLNTSPNTPVRIVKNL 116
>gi|125524834|gb|EAY72948.1| hypothetical protein OsI_00820 [Oryza sativa Indica Group]
Length = 370
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 11/127 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPY 54
N YV+L+N YA A RW+ +L+ V +G+++ CSW E++ HP
Sbjct: 200 NTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFAENRNHPQ 259
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+RI E L D+ RM++EG+ P K AL +D L HS + A+ FG ++ GR
Sbjct: 260 GMRIAEFLDDVARRMQEEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLNLSQGR 319
Query: 115 TIRLINN 121
IR+ N
Sbjct: 320 PIRVTKN 326
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+LSN YA+ RRW D +R + KG+KKTP S E+K SHP
Sbjct: 443 FVLLSNLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEET 502
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L + + ++ EGYVP T L D+E+E+K+ L +H+ + AI F ++TP G IR+
Sbjct: 503 YAMLAKITQLLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRI 562
Query: 119 INNL 122
+ NL
Sbjct: 563 MKNL 566
>gi|224117814|ref|XP_002331638.1| predicted protein [Populus trichocarpa]
gi|222874034|gb|EEF11165.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA+ +RW D +R ++ ++G++KTP S E+ ++HP I
Sbjct: 314 YVLLSNLYASEQRWSDVHEVRRTMLSEGVRKTPGYSLVELGNHVHEFVMGDRTHPQSEAI 373
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L ++ +++ GYVP T L D+E+E+K++ L YHS + AI F I+T G IR+
Sbjct: 374 YKMLVEMAMKLKLAGYVPHTANVLADIEEEEKESALFYHSEKIAIAFMLINTLPGTPIRI 433
Query: 119 INNL 122
I NL
Sbjct: 434 IKNL 437
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+LSN YA+ RRW D +R + KG+KKTP S E+K SHP
Sbjct: 443 FVLLSNLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEET 502
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L + + ++ EGYVP T L D+E+E+K+ L +H+ + AI F ++TP G IR+
Sbjct: 503 YAMLAKITQLLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRI 562
Query: 119 INNL 122
+ NL
Sbjct: 563 MKNL 566
>gi|225432322|ref|XP_002276230.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Vitis vinifera]
Length = 606
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 70/126 (55%), Gaps = 13/126 (10%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRL------------R 57
YV +SN YA A +W++ +R +++ G+ K P CSW EI+ Y
Sbjct: 438 YVTMSNTYAMAGKWENVHSIRYEMKHYGVYKEPGCSWVEIRDSAYVFYAGDVSLCARGSE 497
Query: 58 INEALKDLFERMEQEGYVPTTKEALH-DVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTI 116
+ L++L RM++ GYV ++ + DVE+E K+ ++ HS R A+ FG IS P G TI
Sbjct: 498 VASLLRELERRMKERGYVGGSRGLVSIDVEEEAKEEIVGLHSERLALAFGLISIPKGVTI 557
Query: 117 RLINNL 122
R++ NL
Sbjct: 558 RVMKNL 563
>gi|297739678|emb|CBI29860.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHP 53
+N Y++LSN YA+ +W+ +++R ++ G+K P CS E+ SHP
Sbjct: 462 HNAENYILLSNLYASMSQWEKMSQVRKKMKGMGIKAVPGCSSIEVDGLVHEFVMGDWSHP 521
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+ + E L+D+ +R+ G+ P + LH+V DE+K+N L HS R AI +G + T
Sbjct: 522 EAMEVREILRDISKRVHAVGHQPGISDVLHNVVDEEKENALCEHSERLAIAYGLLKTKTP 581
Query: 114 RTIRLINNL 122
IR++ NL
Sbjct: 582 MAIRIVKNL 590
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 67/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y++LSN +A+ RW D +R + ++G+KK P CSW E+ SHP I
Sbjct: 560 YILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQVHVFLSQDGSHPKIREI 619
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L L + + GYVP T+ LH+V +++K L+YHS R A+ F +ST + IR+
Sbjct: 620 YAKLDKLGQSLMSIGYVPKTEVVLHNVSNKEKMEHLYYHSERLALSFALLSTNAVKPIRI 679
Query: 119 INNL 122
NL
Sbjct: 680 FKNL 683
>gi|115475551|ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa Japonica Group]
Length = 951
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+L N YAA+ R +R +R KG+ KTP CS EIK SHP+ I
Sbjct: 549 YVLLGNIYAASGRHASAREIRHLMREKGVDKTPGCSTVEIKGVIHQFIVGDLSHPFIEEI 608
Query: 59 NEALKDLFERME-QEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
++ R+ +EGYVP KE L D+E+E+K+N L HS + AI F I+T D IR
Sbjct: 609 LSKWDEIDSRIRLEEGYVPDKKEVLLDIEEEEKENALSRHSEKMAIAFALINTSDDMPIR 668
Query: 118 LINNL 122
++ NL
Sbjct: 669 IVKNL 673
>gi|226530803|ref|NP_001148047.1| LOC100281656 [Zea mays]
gi|195615502|gb|ACG29581.1| selenium-binding protein-like [Zea mays]
Length = 597
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTE-----------IKSHPYRLRI 58
YV+L N YAA W + +R ++ +G++ TP C+ E +HP ++ I
Sbjct: 431 YVLLLNTYAAVGEWSKVSEIRKLMQEEGIQTTPGCTTVEHNGTVHEFIADDDAHPRKVEI 490
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L ++++++ GYVP LHD++ E K++ L YHS + AI F + TP R IRL
Sbjct: 491 YENLSEIYKQLRIAGYVPNVSSELHDLDSEGKESALTYHSEKLAIAFALLVTPQHRPIRL 550
Query: 119 INNL 122
NL
Sbjct: 551 AKNL 554
>gi|190612757|gb|ACE80756.1| pentatricopeptide repeat protein [Nardia scalaris]
Length = 152
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRINEALKDLF 66
+AA +W A ++ + KG+KK P C+W E+ HP I+E L+ L
Sbjct: 1 SAAGKWDRGAAIKQRMLEKGVKKDPGCTWIEVNRETHSFTVNRNDHPQIKEIHEQLEYLT 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
+M++ GYVP T++ LHD+ +E+K + L YHS + AI +G +STP G +R+ NL
Sbjct: 61 AQMKEAGYVPDTRQVLHDLAEEEKVSHLGYHSEKLAIAYGLMSTPPGTLLRIYKNL 116
>gi|449468588|ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 558
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 11/123 (8%)
Query: 11 VILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRIN 59
V+LSN Y AA RW + A +R +R K + K P CS + SHP I
Sbjct: 393 VLLSNVYGAAGRWVEKASIRSKMREKRIGKEPGCSSINVDQTIHEFVSGDNSHPQSEDIT 452
Query: 60 EALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLI 119
+ L + + GY+ TK LHD+E+E++++ L YHS + A+ F +S D RTIR++
Sbjct: 453 KFLSSIIGDLRNRGYMMQTKNVLHDIEEEEREHSLSYHSEKLAVAFAILSMKDKRTIRIM 512
Query: 120 NNL 122
NL
Sbjct: 513 KNL 515
>gi|449513257|ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 558
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 11/123 (8%)
Query: 11 VILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRIN 59
V+LSN Y AA RW + A +R +R K + K P CS + SHP I
Sbjct: 393 VLLSNVYGAAGRWVEKASIRSKMREKRIGKEPGCSSINVDQTIHEFVSGDNSHPQSEDIT 452
Query: 60 EALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLI 119
+ L + + GY+ TK LHD+E+E++++ L YHS + A+ F +S D RTIR++
Sbjct: 453 KFLSSIIGDLRNRGYMMQTKNVLHDIEEEEREHSLSYHSEKLAVAFAILSMKDKRTIRIM 512
Query: 120 NNL 122
NL
Sbjct: 513 KNL 515
>gi|358357232|gb|AEU08456.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRINEALKDLF 66
AAA RW DTA++R +R++G +K P E+ K HP I+ LK L
Sbjct: 1 AAAGRWDDTAKVRRMMRDRGARKEPGRCCIEVYSQVRTFVVNDKLHPQIEEIHAELKRLS 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
+M++ GYVP T+ LHDVE EQK L +HS + AI FG IST G +R+I NL
Sbjct: 61 WQMKEAGYVPDTRFVLHDVEKEQKDISLCHHSEKLAIAFGLISTSPGSPLRVIKNL 116
>gi|125546238|gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indica Group]
Length = 602
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
Y++LSN +A +RWK+ + +R + +G+KK P CS E+ +SHP I
Sbjct: 436 YIMLSNVFALTQRWKEKSEIRREMSKRGIKKVPGCSIVELDGEVHEFIAGDESHPQYKDI 495
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
++++ + + G++ T E L D+++E K+ L +HS + AI F + TP G +R+
Sbjct: 496 YRMVEEMARELRRVGHIAATSEVLLDLDEEDKEGALQWHSEKLAIAFALLRTPPGTQVRV 555
Query: 119 INNL 122
+ NL
Sbjct: 556 VKNL 559
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 65/124 (52%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y++LSN +A RW D R+R + +KG+KK P CSW E SHP I
Sbjct: 823 YILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEI 882
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L +L + YVP T+ LH+V + +KK L +HS R A+ F IST + IR+
Sbjct: 883 HLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRI 942
Query: 119 INNL 122
NL
Sbjct: 943 FKNL 946
>gi|414870414|tpg|DAA48971.1| TPA: selenium-binding protein-like protein [Zea mays]
Length = 611
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTE-----------IKSHPYRLRI 58
YV+L N YAA W + +R ++ +G++ TP C+ E +HP ++ I
Sbjct: 445 YVLLLNTYAAVGEWSKVSEIRKLMQEEGIQTTPGCTTVEHNGTVHEFIADDDAHPRKVEI 504
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L ++++++ GYVP LHD++ E K++ L YHS + AI F + TP R IRL
Sbjct: 505 YENLSEIYKQLRIAGYVPNVSSELHDLDSEGKESALTYHSEKLAIAFALLVTPQHRPIRL 564
Query: 119 INNL 122
NL
Sbjct: 565 AKNL 568
>gi|361066849|gb|AEW07736.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
Length = 136
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 65/106 (61%), Gaps = 11/106 (10%)
Query: 28 RLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRINEALKDLFERMEQEGYVP 76
R+R ++++G++K P SW E+K SHP I L+ L E++++ GY P
Sbjct: 1 RMRQMMKSRGIQKKPGYSWIEVKNRVHSFMVNDRSHPQTQEIYTTLESLTEQIKEVGYTP 60
Query: 77 TTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
T LHD+E+E K+++L YHS + AI +G ISTP G +IR++ NL
Sbjct: 61 DTNFVLHDLEEEHKEHVLCYHSEKLAIAYGIISTPPGSSIRIVKNL 106
>gi|224080790|ref|XP_002306231.1| predicted protein [Populus trichocarpa]
gi|222849195|gb|EEE86742.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHP 53
N YV+L+N YA+ WK+ A++R + K +KK SW E+K SHP
Sbjct: 309 QNPASYVLLTNMYASVGNWKERAKVRKLMEEKKVKKVAGYSWIEVKNKTYTFLAGDVSHP 368
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+I L++L +++ GY P T DV++E K+ +L HS R AI FG I TP G
Sbjct: 369 LSNQIYAKLEELSCQLKGAGYQPDTSYVFQDVDEEHKEAILSQHSERLAIAFGLIGTPPG 428
Query: 114 RTIRLINNL 122
++++ NL
Sbjct: 429 TPLQIVKNL 437
>gi|297737119|emb|CBI26320.3| unnamed protein product [Vitis vinifera]
Length = 522
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA+ RW D R+R +++ G+ K P S E+ K+HP I
Sbjct: 356 YVLLSNMYASINRWDDVKRVRKLMKDHGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEI 415
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+++ R+ + G+ P T E L D+E+E+K++ L YHS R AI F I++ IR+
Sbjct: 416 YLKLEEMSRRLHEYGHKPRTLEVLFDIEEEEKEDALSYHSERLAIAFALIASHHCAPIRI 475
Query: 119 INNL 122
I NL
Sbjct: 476 IKNL 479
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 12/124 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+L+N YA+ +W A +R ++ KG+KKTP CS E++ +HP RI
Sbjct: 656 HVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRI 715
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L++L ++ GYVP T L DVED+ ++ LL+ HS + AI FG ++T G TI +
Sbjct: 716 YAFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHV 774
Query: 119 INNL 122
NL
Sbjct: 775 RKNL 778
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA+ RW D R+R +++ G+ K P S E+ K+HP I
Sbjct: 424 YVLLSNMYASINRWDDVKRVRKLMKDHGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEI 483
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+++ R+ + G+ P T E L D+E+E+K++ L YHS R AI F I++ IR+
Sbjct: 484 YLKLEEMSRRLHEYGHKPRTLEVLFDIEEEEKEDALSYHSERLAIAFALIASHHCAPIRI 543
Query: 119 INNL 122
I NL
Sbjct: 544 IKNL 547
>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 65/124 (52%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
+V+LSN +AAA RW++ +R +++ G+KK CSW SH I
Sbjct: 417 HVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEI 476
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L L ME GY+P T AL D+E+E+K + YHS + A+ FG IS P G IR+
Sbjct: 477 QAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRI 536
Query: 119 INNL 122
NL
Sbjct: 537 TKNL 540
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 12/124 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+L+N YA+ +W A +R ++ KG+KKTP CS E++ +HP RI
Sbjct: 656 HVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRI 715
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L++L ++ GYVP T L DVED+ ++ LL+ HS + AI FG ++T G TI +
Sbjct: 716 YAFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHV 774
Query: 119 INNL 122
NL
Sbjct: 775 RKNL 778
>gi|147809935|emb|CAN67095.1| hypothetical protein VITISV_016806 [Vitis vinifera]
Length = 348
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA+ +RW D ++R ++ +G+KKTP S E++ SHP I
Sbjct: 182 YVLLSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEI 241
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L ++ + ++ EGYVP L D+E+E+K+ L YHS + AI F I+T G IR+
Sbjct: 242 YVKLAEITKLLKLEGYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRV 301
Query: 119 INNL 122
+ NL
Sbjct: 302 VKNL 305
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA RW+ ++R + KGM+K P + E+ KSH I
Sbjct: 539 YVLLSNIYAKLLRWEKKTKVREMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHDQYKEI 598
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E ++++ +++ GYVPTT + L D+++E K++ L+ HS + AI F +STP G IR+
Sbjct: 599 YEMVEEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYRHSEKLAIAFALLSTPPGTPIRI 658
Query: 119 INNL 122
+ NL
Sbjct: 659 VKNL 662
>gi|115456255|ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|29124127|gb|AAO65868.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711802|gb|ABF99597.1| expressed protein [Oryza sativa Japonica Group]
gi|113550199|dbj|BAF13642.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|125588431|gb|EAZ29095.1| hypothetical protein OsJ_13153 [Oryza sativa Japonica Group]
gi|215736898|dbj|BAG95827.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 602
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
Y++LSN +A +RWK+ + +R + +G+KK P CS E+ +SHP I
Sbjct: 436 YIMLSNVFALTQRWKEKSEIRREMSKRGIKKVPGCSIVELDGEVHEFIAGDESHPQYKDI 495
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
++++ + + G++ T E L D+++E K+ L +HS + AI F + TP G +R+
Sbjct: 496 YRMVEEMARELRRVGHIAATSEVLLDLDEEDKEGALQWHSEKLAIAFALLRTPPGTQVRV 555
Query: 119 INNL 122
+ NL
Sbjct: 556 VKNL 559
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRLRINEALKD----- 64
YV+LSN YA +W R+R ++ G++K CSW E+ Y + ++L+
Sbjct: 758 YVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQPKSAEI 817
Query: 65 ------LFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L ER+ + GY P T LH+V +E+K ++L HS + AI FG + T G T+R+
Sbjct: 818 RVIWRRLEERISEIGYKPNTSSVLHEVGEEEKIDILRGHSEKLAISFGLLKTTKGTTLRI 877
Query: 119 INNL 122
NL
Sbjct: 878 YKNL 881
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 70/124 (56%), Gaps = 12/124 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
+V+L+N YA A WKD AR+R ++ G++KTP S ++K+ H I
Sbjct: 569 HVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEI 628
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L L E ++ GYVP T +++HDVED+ K LL+ HS + AI FG I T G TI++
Sbjct: 629 YSRLAKLIEEIKAVGYVPDT-DSIHDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQI 687
Query: 119 INNL 122
NL
Sbjct: 688 KKNL 691
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 70/124 (56%), Gaps = 12/124 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
+V+L+N YA A WKD AR+R ++ G++KTP S ++K+ H I
Sbjct: 569 HVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEI 628
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L L E ++ GYVP T +++HDVED+ K LL+ HS + AI FG I T G TI++
Sbjct: 629 YSRLAKLIEEIKAVGYVPDT-DSIHDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQI 687
Query: 119 INNL 122
NL
Sbjct: 688 KKNL 691
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 68/128 (53%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPY 54
N V+LSN YA R+W+D +R+ +R+ +KK P SW ++ SHP
Sbjct: 511 NSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPR 570
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+ I E L L ++++ GYVP T D++D K+ LLH HS R A+ F IS P G+
Sbjct: 571 KSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGK 630
Query: 115 TIRLINNL 122
I + NL
Sbjct: 631 PIIVKKNL 638
>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 695
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 74/129 (57%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSW-----------TEIKSHP 53
+N V+V LS YA+ +W+D +R +R+ +KK P SW +E SHP
Sbjct: 524 DNTGVHVSLSGIYASLGQWEDVKAVRKLMRDNRIKKLPGFSWVDSNKKTHVFGSEDWSHP 583
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+ +I E L++L+ER+++EGYVP T+ ++ED K+ +L YHS R A+ F IS P
Sbjct: 584 QQEKIYEKLEELYERIKEEGYVPDTRFLPCNLEDTAKQRILRYHSERIAVAFALISMPAT 643
Query: 114 RTIRLINNL 122
+ I + NL
Sbjct: 644 KPIIVKKNL 652
>gi|225441064|ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Vitis vinifera]
Length = 882
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 66/124 (53%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSW-----------TEIKSHPYRLRI 58
Y+++SN Y+A RW + +R +R KG +K P SW KSHP I
Sbjct: 716 YILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSWIIHENKVHSFYARDKSHPQAKDI 775
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+ L + GYVP T LH+VE+ QKK+ L YHS + A +G + T GR IR+
Sbjct: 776 HSGLELLIMECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKIAATYGLLMTRPGRPIRI 835
Query: 119 INNL 122
+ N+
Sbjct: 836 VKNI 839
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 65/124 (52%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
+V+LSN +AAA RW++ +R +++ G+KK CSW SH I
Sbjct: 518 HVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEI 577
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L L ME GY+P T AL D+E+E+K + YHS + A+ FG IS P G IR+
Sbjct: 578 QAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRI 637
Query: 119 INNL 122
NL
Sbjct: 638 TKNL 641
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 70/128 (54%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI--KSH---------PY 54
N+ YV LSN YA + RW D R+R +++ G++K CSW E+ K H P
Sbjct: 640 NVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQ 699
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
++ + L ++M + GY P T LHDV++E+K L HS + AI FG ++T G
Sbjct: 700 SKEMSMTWRKLEKKMCKIGYKPNTSAVLHDVDEEKKIEKLRGHSEKLAICFGLLNTTKGT 759
Query: 115 TIRLINNL 122
T+R+ NL
Sbjct: 760 TLRIFKNL 767
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 70/131 (53%), Gaps = 11/131 (8%)
Query: 3 NLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS----------- 51
L + YV+LSN YAAAR W A++R ++ G++K P CS E+K+
Sbjct: 455 GLASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKEPGCSSIEVKNRVHEFVAGDRR 514
Query: 52 HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTP 111
HP I L+ + +++ Y P T LHD+ +++K+ L HS + A+ FG IST
Sbjct: 515 HPRSKDIYSMLEKMNGWLKERHYTPKTDAVLHDIGEQEKEQSLEVHSEKLALAFGLISTS 574
Query: 112 DGRTIRLINNL 122
G I+++ NL
Sbjct: 575 PGAAIKIVKNL 585
>gi|297740028|emb|CBI30210.3| unnamed protein product [Vitis vinifera]
Length = 900
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 66/124 (53%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSW-----------TEIKSHPYRLRI 58
Y+++SN Y+A RW + +R +R KG +K P SW KSHP I
Sbjct: 734 YILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSWIIHENKVHSFYARDKSHPQAKDI 793
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+ L + GYVP T LH+VE+ QKK+ L YHS + A +G + T GR IR+
Sbjct: 794 HSGLELLIMECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKIAATYGLLMTRPGRPIRI 853
Query: 119 INNL 122
+ N+
Sbjct: 854 VKNI 857
>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
Length = 631
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 66/124 (53%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+LSN +AAA RW + +R +++ G+KK CSW K SH I
Sbjct: 465 HVLLSNMFAAAGRWDEATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAKDTSHERNSEI 524
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L L M+ GY+P T AL+D+E+E+K + YHS + A+ FG I+ P G IR+
Sbjct: 525 QAMLVKLRTEMQAAGYMPDTNYALYDLEEEEKMTEVGYHSEKIALAFGLIALPPGVPIRI 584
Query: 119 INNL 122
NL
Sbjct: 585 TKNL 588
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 70/125 (56%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-------KSHPYRLRINEA- 61
Y+++SN +A +W + R + +G++K PACSW EI S Y R +EA
Sbjct: 774 YILVSNVFAEMGKWNNAKETRTRMAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAI 833
Query: 62 ---LKDLFERMEQEG-YVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
L ++ E + +EG YV T+ LHD +E+K ++LH HS R AI FG IST G IR
Sbjct: 834 HLKLSEITEMLRREGGYVEDTRFVLHDTSEEEKIDMLHKHSERIAIAFGLISTRPGMPIR 893
Query: 118 LINNL 122
+ NL
Sbjct: 894 IAKNL 898
>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 1 MINLNNM--RVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI--------- 49
+IN+ + R Y++LSN Y+A+R WKD A++R ++ +G+K+TP S E
Sbjct: 433 LINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFV 492
Query: 50 --KSHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGA 107
+SHP +I L++L ++ + GY T+ L DVE+E K+++++ HS + AI FG
Sbjct: 493 GDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGL 552
Query: 108 ISTPDGRTIRLINNL 122
+ + +G + + NL
Sbjct: 553 LVSKEGEALIITKNL 567
>gi|190612833|gb|ACE80794.1| pentatricopeptide repeat protein [Psilotum nudum]
Length = 152
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 66/117 (56%), Gaps = 13/117 (11%)
Query: 18 AAARRWKDTARLRVSVRNKGMKK-TPACSWTEIKS-----------HPYRLRINEALKDL 65
AA+ RW D ++R + N+G+KK P C+W E+ S HP I+ L L
Sbjct: 1 AASSRWNDKLKVRTMMENRGVKKRQPGCTWIEVNSQLHSFVVDDMSHPQTKEIHAELNRL 60
Query: 66 FERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
F M + GYVP T+ LHD+E+++ +L H HS + AI FG I+TP G + ++ NL
Sbjct: 61 FGLMVEIGYVPDTRFVLHDLEEQEGTSLCH-HSEKLAIAFGLITTPAGTPVHIMKNL 116
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+LSN YA A W + A++R + KGMKK P CS EI S HP I
Sbjct: 507 YVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVGDKLHPRNREI 566
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+++ +E+ G+VP T E L ++E+E K+ L +HS + AI FG IST G + +
Sbjct: 567 YGMLEEMEALLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTI 626
Query: 119 INNL 122
+ NL
Sbjct: 627 VKNL 630
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS---------- 51
++ N YV+LSN Y + + + + A +R + + + KTP C+ EI
Sbjct: 613 LDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRPHVFMAGDH 672
Query: 52 -HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
HP I L+ L +M + GY P T+ AL+DVE+E+K++++ HS + AI FG +ST
Sbjct: 673 LHPQSEAIYSYLERLTAKMIEAGYQPVTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLST 732
Query: 111 PDGRTIRLINNL 122
G IR+I NL
Sbjct: 733 EPGTEIRIIKNL 744
>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 1 MINLNNM--RVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI--------- 49
+IN+ + R Y++LSN Y+A+R WKD A++R ++ +G+K+TP S E
Sbjct: 433 LINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFV 492
Query: 50 --KSHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGA 107
+SHP +I L++L ++ + GY T+ L DVE+E K+++++ HS + AI FG
Sbjct: 493 GDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGL 552
Query: 108 ISTPDGRTIRLINNL 122
+ + +G + + NL
Sbjct: 553 LVSKEGEALIITKNL 567
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA+ +RW D ++R ++ +G+KKTP S E++ SHP I
Sbjct: 302 YVLLSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEI 361
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L ++ + ++ EGYVP L D+E+E+K+ L YHS + AI F I+T G IR+
Sbjct: 362 YVKLAEITKLLKLEGYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRV 421
Query: 119 INNL 122
+ NL
Sbjct: 422 VKNL 425
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 67/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+LSN YA ARRW + A +R ++ KG+KK P SW E + SH I
Sbjct: 555 HVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVHCFTVADTSHADLKLI 614
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
N L+ L + + GY P L DVED++K+ LL HS R A+ FG + P G IR+
Sbjct: 615 NGMLEFLNMKTRKAGYSPQLNAVLLDVEDDEKERLLWLHSERLALAFGLVRMPAGCPIRI 674
Query: 119 INNL 122
I NL
Sbjct: 675 IKNL 678
>gi|147804919|emb|CAN78051.1| hypothetical protein VITISV_015864 [Vitis vinifera]
Length = 231
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 13/126 (10%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRL------------R 57
YV +SN YA A +W++ +R +++ G+ K P CSW EI+ Y
Sbjct: 63 YVTMSNTYAMAGKWENVHSIRYEMKHYGVYKEPGCSWVEIRDSAYVFYAGDVSLCARGSE 122
Query: 58 INEALKDLFERMEQEGYVPTTKEALH-DVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTI 116
+ L +L RM++ GYV ++ + DVE+E K+ ++ HS R A+ FG IS P G TI
Sbjct: 123 VASLLXELERRMKERGYVGGSRGLVSIDVEEEAKEEIVGLHSERLALAFGLISIPKGVTI 182
Query: 117 RLINNL 122
R++ NL
Sbjct: 183 RVMKNL 188
>gi|242081563|ref|XP_002445550.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
gi|241941900|gb|EES15045.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
Length = 595
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTE-----------IKSHPYRLRI 58
YV+L N YAA W + +R ++ KG++ TP C+ E +HP ++ I
Sbjct: 429 YVLLLNTYAAVGEWSKVSEVRKLMQEKGIQTTPGCTTVEHNGEVYEFIADDDAHPRKVEI 488
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L ++ +++ GYVP LHD++ E K++ L YHS + AI F + TP R IRL
Sbjct: 489 YEKLNEINKQLRIAGYVPNVSSELHDLDSEGKESALTYHSEKLAIAFALLVTPQNRPIRL 548
Query: 119 INNL 122
NL
Sbjct: 549 AKNL 552
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV LSN YA++ W A +R+ +++ ++K P CSW EI SH I
Sbjct: 472 YVALSNMYASSGNWDGVAAVRLMMKDMDIRKDPGCSWIEIDGVIHEFLVEDDSHSRAKDI 531
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+++ ++ EG++P T + L ++++ K+++LHYHS + A+ FG ISTP + +
Sbjct: 532 HSMLEEISNKLSLEGHMPDTTQVLLKMDEKHKESVLHYHSEKIAVAFGLISTPPKTPLCI 591
Query: 119 INNL 122
+ NL
Sbjct: 592 VKNL 595
>gi|224139038|ref|XP_002326752.1| predicted protein [Populus trichocarpa]
gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
+N +N YV+LSN YA A+RW+D A++R + KG +TP S +++
Sbjct: 385 LNSSNPGDYVVLSNMYARAKRWEDVAKIRTEMARKGFTQTPGFSLVQVERKIYKFVSQDM 444
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP + E + + +++ EGY P T + L DV++E+K+ L HS + A+ F I T
Sbjct: 445 SHPQCKGMYEMIHQMEWQLKFEGYSPDTSQVLFDVDEEEKRQRLKAHSQKLAMAFALIHT 504
Query: 111 PDGRTIRLINNL 122
G IR+ NL
Sbjct: 505 SQGAPIRIARNL 516
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 12/124 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+L+N YA A WKD AR+R ++ KG++KTP S ++K +H I
Sbjct: 735 HVLLANIYANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDI 794
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L L E ++ GYVP T +++HDVED+ K LL+ HS + AI +G I T G TI++
Sbjct: 795 YARLAKLIEEIKAVGYVPDT-DSIHDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQI 853
Query: 119 INNL 122
NL
Sbjct: 854 KKNL 857
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN Y+ A+ W +R ++N ++K P S E+ +SHP +I
Sbjct: 474 YVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKI 533
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L ++ R++ GY P T L D ++++K+N L +HS + AI FG +ST G TIR+
Sbjct: 534 LRMLSEITARLKANGYAPLTASVLQDFDEKEKENALAHHSEKLAIAFGLLSTAPGSTIRI 593
Query: 119 INNL 122
+ NL
Sbjct: 594 VKNL 597
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 76/127 (59%), Gaps = 14/127 (11%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
Y++L++ Y+AAR+W++ AR+R +R++G++K P CSW E+ SHP I
Sbjct: 551 YIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPRIKEI 610
Query: 59 NEALKDLFERMEQEGYVPTTKEAL---HDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRT 115
+ L ++F +M++ GYVP + A + +++K+ +L +HS + A+ FG + T G
Sbjct: 611 HMYLDEMFVKMKRAGYVPDVRWAFVKDDETGEQEKEIMLAHHSEKLAVAFGLLFTKHGEP 670
Query: 116 IRLINNL 122
+ ++ NL
Sbjct: 671 LLVVKNL 677
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 72/131 (54%), Gaps = 11/131 (8%)
Query: 3 NLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI--KSHPYRLRINE 60
N++N +YV+LSN YA ++ A++R ++ KG+ K P S EI K H +R E
Sbjct: 457 NISNSGIYVLLSNIYALVGDYEGVAKVRNLMKEKGIVKEPGISTIEIDNKVHEFRAGDRE 516
Query: 61 ALKD---------LFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTP 111
LK + ER++ GYVP T LHD+E+ +K+ L HS R AI +G IST
Sbjct: 517 HLKSKEIYTMLRKMSERIKSHGYVPNTNTVLHDLEETEKERSLQVHSERLAIAYGLISTK 576
Query: 112 DGRTIRLINNL 122
G +++ NL
Sbjct: 577 PGSPLKIFKNL 587
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS---------- 51
+N N YV L+N YA+ RW+D AR+R ++ + K P SW EI++
Sbjct: 482 LNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDR 541
Query: 52 -HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
HP I++ LK+L ++M+ GY P + ALH+VE+EQK+ LL +HS + A+ FG I
Sbjct: 542 IHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKL 601
Query: 111 PDGRTIRLINNL 122
P G I++ NL
Sbjct: 602 PQGSQIQVFKNL 613
>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Vitis vinifera]
gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 67/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
+V+LSN YAAA RW ++R ++ KG +K A S E KSHP I
Sbjct: 444 HVLLSNMYAAAGRWHCVEKVRQRMKKKGARKVAAYSSVEFNGEIHILYGGDKSHPQSASI 503
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+DL ++M+ GY+P T HDVEDE+K++ L HS + AI F I+ IR+
Sbjct: 504 LAKLEDLLKQMKSMGYIPETDSVFHDVEDEEKESTLSTHSEKLAIAFSLINGSPKFPIRV 563
Query: 119 INNL 122
+ NL
Sbjct: 564 MKNL 567
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA W+ ++R + KGMKK P + EI KSH I
Sbjct: 440 YVLLSNIYAKTLSWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQHKEI 499
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E + ++ M++ GY P+T E L D+ +E K++ L+ HS + AI FG + TP G IR+
Sbjct: 500 YEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDSLNRHSEKLAIAFGLLRTPPGTPIRI 559
Query: 119 INNL 122
+ NL
Sbjct: 560 VKNL 563
>gi|358357188|gb|AEU08434.1| pentatricopeptide repeat protein [Lejeunea cavifolia]
Length = 152
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 67/116 (57%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRLRINE-------ALKDLFER-- 68
A+A WK +A + +KG++K P C+W E+ + + R+++ A++ ER
Sbjct: 1 ASAGDWKRSAGVSRERLDKGVRKQPGCTWMEVDGNVHVFRVDDREHPQLPAIRAELERLS 60
Query: 69 --MEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
M+ GYVP T LHDVE+EQK + L YHS + AI FG +STP G IR+ NL
Sbjct: 61 VLMKDAGYVPDTSFVLHDVEEEQKISRLLYHSEKLAIAFGLLSTPAGTPIRIFKNL 116
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN A A +W++ ++R + + G++K P S+ E+ KSHP I
Sbjct: 556 YVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEI 615
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
LKD+ R++ GYVP T + + D+++E+K++++ YHS + A+ FG + TIR+
Sbjct: 616 ELMLKDMAMRLKSAGYVPNTAQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTDTIRI 675
Query: 119 INNL 122
+ NL
Sbjct: 676 VKNL 679
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 67/130 (51%), Gaps = 12/130 (9%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHP 53
N YV+LSN YA A +W + LR +R+ G+KK P CS E+ SHP
Sbjct: 450 GNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHP 509
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQ-KKNLLHYHSGRFAIVFGAISTPD 112
+I L ++ R+E GYVP L VE+E K+ L HS + AI FG IST
Sbjct: 510 SAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQ 569
Query: 113 GRTIRLINNL 122
+ IR++ NL
Sbjct: 570 SQPIRIVKNL 579
>gi|297739965|emb|CBI30147.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN A A +W++ ++R + + G++K P S+ E+ KSHP I
Sbjct: 341 YVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEI 400
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
LKD+ R++ GYVP T + + D+++E+K++++ YHS + A+ FG + TIR+
Sbjct: 401 ELMLKDMAMRLKSAGYVPNTAQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTDTIRI 460
Query: 119 INNL 122
+ NL
Sbjct: 461 VKNL 464
>gi|358357234|gb|AEU08457.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRINEALKDLF 66
AAA RW D A++R + ++G++K P E+ + HP I+ LK L
Sbjct: 1 AAAGRWDDAAKIRKMMHDRGIRKEPGRCCIEVDNQVHTFVVDDNLHPRIEEIHAELKRLS 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
RM+ GYVP T+ LHDVE+E+K+ L +HS R AI FG IS P IR+I NL
Sbjct: 61 RRMKDAGYVPDTQFVLHDVEEERKELSLCHHSERLAIAFGLISMPTAMPIRIIKNL 116
>gi|358357230|gb|AEU08455.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 68/116 (58%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRINEALKDLF 66
AAA RW DTA++R +++++G++K P E+ + HP I LK L+
Sbjct: 1 AAAGRWDDTAKVRKTMKDRGVRKEPGRCCIEVDNRVHTFVVDDTLHPQIDEIQAELKSLY 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
++ + GYV T+ LHDV+++QKK L +HS + AI FG IST G +R+I NL
Sbjct: 61 VQIREAGYVADTQFVLHDVKEQQKKFFLCHHSEKLAIAFGLISTSPGTPLRVIKNL 116
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 74/133 (55%), Gaps = 12/133 (9%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKK-TPACSWTEIKS--------- 51
I N YV+LSN YAAA RW + A++R + +KGMKK P CS EI S
Sbjct: 525 IEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGD 584
Query: 52 --HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIS 109
HP I L+++ +E+ G+VP T E L ++E+E ++ L +HS + AI FG IS
Sbjct: 585 KLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWREGALRHHSEKLAIAFGLIS 644
Query: 110 TPDGRTIRLINNL 122
T G + ++ NL
Sbjct: 645 TKPGTKLTIMKNL 657
>gi|190612935|gb|ACE80845.1| pentatricopeptide repeat protein [Fossombronia pusilla]
Length = 152
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 63/116 (54%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRINEALKDLF 66
AAA W +A L+ G KK P C+WTE+ + HP + I L+ L
Sbjct: 1 AAAHNWDSSAILQRKRMEMGAKKQPGCTWTEVNNEVHSFIGDDQDHPQIVEIRAELRRLL 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
+M++ GYVP T LH+V++E+K L +HSG+ AI FG +STP G I + NL
Sbjct: 61 LQMKEAGYVPDTSFVLHNVDEEEKVLRLCHHSGKLAIAFGLLSTPPGTPISIFKNL 116
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
Y++LSN YA+ +WK+ A +R ++ KG++K P CS E++ HP I
Sbjct: 579 YILLSNTYASVGQWKNAAMVRKEMKEKGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEI 638
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E + ++ E ++ GY+P T +A DV++ +K+ + +HS + AI FG + + G TIRL
Sbjct: 639 YEKVHEMIENIKMVGYIPNTADARLDVDEYEKQVSVSHHSEKLAIAFGLMKSRPGATIRL 698
Query: 119 INNL 122
NL
Sbjct: 699 SKNL 702
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+LSN YAA ++W++ A+ R +R+ +KK SW +IK SHP I
Sbjct: 471 HVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGQSWIDIKDKVHIFRVGESSHPRIREI 530
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L +L + + GY P+ + LHDVE +K+ LL HS + A+VFG + P+G T+R+
Sbjct: 531 CTMLDNLVIELRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPEGSTVRI 590
Query: 119 INNL 122
+ NL
Sbjct: 591 MKNL 594
>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN A+ RW + AR+R + +G+KK P SW ++K SHP I
Sbjct: 845 YVLLSNMCASNHRWDEAARVRSLMHQRGIKKQPGQSWIQLKDQIHTFIMGDRSHPQDEEI 904
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L L R+++ GY K + DVE+EQ + L+ +HS + A+VFG I+T + IR+
Sbjct: 905 YSYLDILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRTPIRI 964
Query: 119 INNL 122
I NL
Sbjct: 965 IKNL 968
>gi|190612973|gb|ACE80864.1| pentatricopeptide repeat protein [Cyathea smithii]
Length = 152
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 68/116 (58%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRINEALKDLF 66
AAA W+ A++R ++RN GMKK S+ E+ SHP + I L+ L
Sbjct: 1 AAAGMWEGVAKVREALRNSGMKKKHGRSYIEVNKRVHGFIAGDTSHPLKGEIYSELQRLI 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
++++ GYVP TK L+DVE+E K++++ YHS + AI FG I+TP G + + NL
Sbjct: 61 MQVKEAGYVPDTKSVLNDVEEEIKEHVIGYHSEKLAIAFGLIATPTGSPLFITKNL 116
>gi|302824741|ref|XP_002994011.1| hypothetical protein SELMODRAFT_137997 [Selaginella moellendorffii]
gi|300138173|gb|EFJ04951.1| hypothetical protein SELMODRAFT_137997 [Selaginella moellendorffii]
Length = 434
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 73/125 (58%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK------------SHPYRLR 57
YV+LSN +AAA + A++R + +G++K P S EI HP + +
Sbjct: 267 YVLLSNIHAAAGDHAEKAKVRDLMEARGVRKKPGWSTIEINDRFHEFTAGEKFQHPKKQQ 326
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I E LK L M+++GYVP T E L V +++K++LL +HS + AI G ISTP G T+R
Sbjct: 327 ILEELKRLSVLMKEDGYVPDTTEVLRLVNEDEKESLLFFHSEKLAIACGLISTPPGTTLR 386
Query: 118 LINNL 122
++ NL
Sbjct: 387 VVKNL 391
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/128 (35%), Positives = 67/128 (52%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPY 54
N+ YV++SN Y+ R++ A +R + K + KTP C+ EI +SHP
Sbjct: 435 NIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTLIEIGQVPHVFTSGDQSHPQ 494
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
I L L +M + G+ T LHD+E+E+K+ + HS + AI FG IST G
Sbjct: 495 SKAIYAELDKLTGKMTEAGFQTETTTVLHDLEEEEKELTMKVHSEKLAIAFGLISTEPGA 554
Query: 115 TIRLINNL 122
IR+I NL
Sbjct: 555 EIRIIKNL 562
>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
Length = 923
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
+N + Y+++ N YA A +W + A +R S+ G KK P SW E+K
Sbjct: 749 LNPGSTGPYLVMHNLYAGAGKWPEAAAVRKSMVELGPKKEPGLSWIEVKGRIHEFRVGDT 808
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP I+ L+ L E M++ G+V K ++D++ ++K++LL HS + AI FG IST
Sbjct: 809 SHPRSSEIHRELERLNEEMKRAGFVCDIKAVVYDLQAKEKESLLCQHSEKLAIAFGLIST 868
Query: 111 PDGRTIRLINNL 122
G +R++ NL
Sbjct: 869 AAGEPLRIMKNL 880
>gi|302809294|ref|XP_002986340.1| hypothetical protein SELMODRAFT_123858 [Selaginella moellendorffii]
gi|300145876|gb|EFJ12549.1| hypothetical protein SELMODRAFT_123858 [Selaginella moellendorffii]
Length = 203
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+LSN Y++ R + +R ++++ ++K P S E+ S HP I
Sbjct: 37 YVVLSNMYSSIGRRDKVSMIRNLMKSRRVRKVPGISNIEVGSEVHSFVVGDLSHPRSEDI 96
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ M GYVP TKE LHDV +EQK+ LLHYHS + A+ FG IST G +R+
Sbjct: 97 VVELQRPAREMRDAGYVPDTKEILHDVGEEQKEELLHYHSEKMAVAFGLISTEQGSPLRI 156
Query: 119 INNL 122
+ NL
Sbjct: 157 LKNL 160
>gi|297745917|emb|CBI15973.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 67/130 (51%), Gaps = 12/130 (9%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHP 53
N YV+LSN YA A +W + LR +R+ G+KK P CS E+ SHP
Sbjct: 480 GNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHP 539
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQ-KKNLLHYHSGRFAIVFGAISTPD 112
+I L ++ R+E GYVP L VE+E K+ L HS + AI FG IST
Sbjct: 540 SAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQ 599
Query: 113 GRTIRLINNL 122
+ IR++ NL
Sbjct: 600 SQPIRIVKNL 609
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 67/130 (51%), Gaps = 12/130 (9%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHP 53
N YV+LSN YA A +W + LR +R+ G+KK P CS E+ SHP
Sbjct: 571 GNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHP 630
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQ-KKNLLHYHSGRFAIVFGAISTPD 112
+I L ++ R+E GYVP L VE+E K+ L HS + AI FG IST
Sbjct: 631 SAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQ 690
Query: 113 GRTIRLINNL 122
+ IR++ NL
Sbjct: 691 SQPIRIVKNL 700
>gi|147864762|emb|CAN84062.1| hypothetical protein VITISV_010661 [Vitis vinifera]
Length = 641
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+LSN YAA RW++ AR R ++ KK SW EIK +HP + I
Sbjct: 455 HVLLSNIYAANNRWEEVARARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEI 514
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+DL M++ GY T+ LHDVE+ +K+ LL +HS + A+ FG + P G IR+
Sbjct: 515 YLKLEDLVGEMKKIGYKAKTEHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIRI 574
Query: 119 INNL 122
+ NL
Sbjct: 575 MKNL 578
>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 681
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 70/129 (54%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHP 53
+++ V ++SN YAA ++W ++R +++ G KK P CS EI+ SHP
Sbjct: 510 DDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHP 569
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
R I + L M + GY+P T+ HD+E+E K+ L YHS R AI FG ++T G
Sbjct: 570 QREEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPG 629
Query: 114 RTIRLINNL 122
+ +I NL
Sbjct: 630 TRLVIIKNL 638
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 66/125 (52%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
Y+ +SN YAA W+ A +R + +G+KK P S+ E+ K HP I
Sbjct: 650 YIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEI 709
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST-PDGRTIR 117
E L L M GYVP TK LHDV + +K+ +L YHS + AI FG +S+ G IR
Sbjct: 710 CEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIR 769
Query: 118 LINNL 122
++ NL
Sbjct: 770 VVKNL 774
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 74/133 (55%), Gaps = 12/133 (9%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPY------- 54
++ NN +V+LSNAYA A +WKD A +R S+ + + KTP S E+ Y
Sbjct: 468 LDPNNSSDHVLLSNAYAVAGKWKDAASVRRSMTEQRITKTPGWSMIEVDKIMYTFLAGTK 527
Query: 55 RLRINEA----LKDLFERMEQEG-YVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIS 109
+ +I E LK++ R+ EG YVP LHD+E+E+K+ + HS + A+ FG
Sbjct: 528 QYKITEEAYKKLKEIIRRLRVEGGYVPEIGRVLHDIEEEEKEGSVSVHSEKLAVAFGIAR 587
Query: 110 TPDGRTIRLINNL 122
GRTIR++ NL
Sbjct: 588 LCKGRTIRIVKNL 600
>gi|77548549|gb|ABA91346.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 624
Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
+V++SN YA RW D + R +++ G+ K+P S+ +I K+HP I
Sbjct: 458 HVLISNFYATTNRWDDAKKARKEMKSMGIDKSPGSSFVDINGVLHEFLVGDKTHPASKEI 517
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
++D+ R+ + G+ +T AL DVE+E K + L YHS R AI F I++ G IR+
Sbjct: 518 YAMVEDIETRLSECGHRSSTSSALFDVEEEDKADALSYHSERLAIAFALIASNPGAPIRI 577
Query: 119 INNL 122
I NL
Sbjct: 578 IKNL 581
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 66/125 (52%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
Y+ +SN YAA W+ A +R + +G+KK P S+ E+ K HP I
Sbjct: 650 YIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEI 709
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST-PDGRTIR 117
E L L M GYVP TK LHDV + +K+ +L YHS + AI FG +S+ G IR
Sbjct: 710 CEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIR 769
Query: 118 LINNL 122
++ NL
Sbjct: 770 VVKNL 774
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 12/130 (9%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTE------------IKSH 52
N YV+LS+ Y + RW+D +++R + ++ + K+P CSW E + +H
Sbjct: 534 GNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAH 593
Query: 53 PYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPD 112
P I L+ L + + GY LHD+++EQK + L YHS R A+ +G + P+
Sbjct: 594 PEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPE 653
Query: 113 GRTIRLINNL 122
G IR++ NL
Sbjct: 654 GMPIRVMKNL 663
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 66/124 (53%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YVIL+N YA + +W+ +LR + +K +KK ACSW E+K SH I
Sbjct: 454 YVILANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAI 513
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
LK L M + GY P T HDVE+++K +++ HS R AI FG IST G + +
Sbjct: 514 YAELKRLEGLMHEAGYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLI 573
Query: 119 INNL 122
NL
Sbjct: 574 TKNL 577
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA R+ D +++R ++N+G+K P S ++ SHP I
Sbjct: 500 YVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEI 559
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
LK + ER++ G+ P T + L D+++E+K+ ++YHS + AI FG I+T G+ I +
Sbjct: 560 YRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHI 619
Query: 119 INNL 122
+ NL
Sbjct: 620 VKNL 623
>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN A+ RW + AR+R + +G+KK P SW ++K SHP I
Sbjct: 845 YVLLSNMCASNHRWDEAARVRSLMHQRGVKKQPGQSWIQLKDQIHTFVMGDRSHPQDDEI 904
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L L R+++ GY K + DVE+EQ + L+ +HS + A+VFG I+T + IR+
Sbjct: 905 YSYLDILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRTPIRI 964
Query: 119 INNL 122
I NL
Sbjct: 965 IKNL 968
>gi|224074129|ref|XP_002304264.1| predicted protein [Populus trichocarpa]
gi|222841696|gb|EEE79243.1| predicted protein [Populus trichocarpa]
Length = 499
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+L N Y++ WK LR ++ KG++ TPA S E+K SHP + I
Sbjct: 333 YVLLFNLYSSVDNWKKVTELRKFMKEKGIQTTPASSSIELKGKVHEFVVDDVSHPQKDEI 392
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L ++ ++++ GYV L +++ E+K+ +L YHS + AI FG ++TP G TIR+
Sbjct: 393 YEMLDEISKQLKIAGYVAEITSELPNLDAEEKRYVLSYHSEKLAIAFGVLATPPGTTIRI 452
Query: 119 INNL 122
NL
Sbjct: 453 AKNL 456
>gi|359495686|ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Vitis vinifera]
Length = 540
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV +SN YA+ RW ++R ++ K KK S EI +SHP R +I
Sbjct: 374 YVFVSNVYASLGRWSSVCQVRSLMKEKAPKKQHGWSSIEINFMVHKFIMGEESHPKREKI 433
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L + +++Q G+V +T + LHD+++E+K+ L HS R AI +G + TP+G IR+
Sbjct: 434 YGMLHQMARKLKQVGHVASTVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRI 493
Query: 119 INNL 122
+ NL
Sbjct: 494 VKNL 497
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 12/130 (9%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTE------------IKSH 52
N YV+LS+ Y + RW+D +++R + ++ + K+P CSW E + +H
Sbjct: 534 GNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAH 593
Query: 53 PYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPD 112
P I L+ L + + GY LHD+++EQK + L YHS R A+ +G + P+
Sbjct: 594 PEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPE 653
Query: 113 GRTIRLINNL 122
G IR++ NL
Sbjct: 654 GMPIRVMKNL 663
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 76/132 (57%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++ +N+ +V+LSN ++A R + A +R + + + + K P + EI +
Sbjct: 618 LDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQ 677
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP I+E L+ L +M + GY P T+ ALHDVE+E+++ ++ HS R AI FG I+T
Sbjct: 678 SHPQVKAIHEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIAT 737
Query: 111 PDGRTIRLINNL 122
G IR+I NL
Sbjct: 738 EPGTEIRIIKNL 749
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 76/136 (55%), Gaps = 14/136 (10%)
Query: 1 MINLN--NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI--------- 49
+I LN N Y++LSN YAA RWKD A +R +++K +KK A SW EI
Sbjct: 517 LIELNPFNAVPYIMLSNMYAARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVA 576
Query: 50 --KSHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGA 107
++HP I+ L L ++++ G+ P T LHD +++K ++YHS + A+ +G
Sbjct: 577 DDRTHPDAKIIHVQLNRLIRKLQEAGFSPNTNLVLHDFGEDEKLESINYHSEKLALAYGL 636
Query: 108 ISTPDGRT-IRLINNL 122
I P G T IR+I N+
Sbjct: 637 IKKPHGVTPIRIIKNI 652
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 12/130 (9%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTE------------IKSH 52
N YV+LS+ Y + RW+D +++R + ++ + K+P CSW E + +H
Sbjct: 534 GNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAH 593
Query: 53 PYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPD 112
P I L+ L + + GY LHD+++EQK + L YHS R A+ +G + P+
Sbjct: 594 PEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPE 653
Query: 113 GRTIRLINNL 122
G IR++ NL
Sbjct: 654 GMPIRVMKNL 663
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 71/125 (56%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
+V+LSN YA A +WKD A LR S+ ++ +KKTP S E+ K + +
Sbjct: 475 HVLLSNIYAVAGKWKDVAALRRSMTHQRLKKTPGWSMIEVNRIIYSFVAGEKQNDIAVEA 534
Query: 59 NEALKDLFERMEQEG-YVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
++ L+++ R+ EG YVP LHD+E E+K++ + HS + A+ FG P GR IR
Sbjct: 535 HQKLREIMSRLRIEGGYVPEVGSVLHDIEVEEKEDSVSQHSEKLAVAFGMAKLPRGRAIR 594
Query: 118 LINNL 122
++ NL
Sbjct: 595 VVKNL 599
>gi|226507132|ref|NP_001145890.1| uncharacterized protein LOC100279406 [Zea mays]
gi|219884839|gb|ACL52794.1| unknown [Zea mays]
Length = 318
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA RRWK+ + +R + +G+KK P CS E+ +SHP I
Sbjct: 152 YVMLSNVYALTRRWKEKSEIRREMSKRGIKKVPGCSLVELDGEVHEFIAGDESHPQWKEI 211
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
++++ + + G++ T E L D+++E K+ L +HS + AI F + TP G +R+
Sbjct: 212 YMMVEEMARELRRAGHISATSEVLLDLDEEDKEVALQWHSEKLAIAFVLLRTPPGTQVRV 271
Query: 119 INNL 122
+ NL
Sbjct: 272 VKNL 275
>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 840
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+LSN ++ A RW+D A +R +++ G+ K P SW E+KS HP I
Sbjct: 609 YVLLSNMFSVAGRWEDAAHIRRAMKTMGINKEPGYSWIEMKSQVHTFISEDRSHPLAAEI 668
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ ++ +++ G+VP AL D+++E K+ L YHS + A+ FG ++ G IR+
Sbjct: 669 YSKIDEMMILIKEAGHVPDMNFALRDMDEEAKERSLAYHSEKLAVAFGLLTVAKGAPIRI 728
Query: 119 INNL 122
NL
Sbjct: 729 FKNL 732
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
+V+LSN YA+A +W+ +R KG++KTP S E+ ++HP +
Sbjct: 658 HVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEM 717
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L L E+++ GYVP + L DVED++K+++L HS R A+ F I+TP TIR+
Sbjct: 718 YRELTALHEKLKMVGYVPDHRFVLQDVEDDEKEHILMSHSERLAMAFALITTPAKTTIRI 777
Query: 119 INNL 122
NL
Sbjct: 778 FKNL 781
>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+LSN YAA RW++ AR R ++ KK SW EIK +HP + I
Sbjct: 455 HVLLSNIYAANDRWEEVARARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEI 514
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+DL M++ GY T+ LHDVE+ +K+ LL +HS + A+ FG + P G IR+
Sbjct: 515 YLKLEDLVGEMKKIGYKAKTEHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIRI 574
Query: 119 INNL 122
+ NL
Sbjct: 575 MKNL 578
>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
Length = 787
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 70/129 (54%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHP 53
+++ V ++SN YAA ++W ++R +++ G KK P CS EI+ SHP
Sbjct: 510 DDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHP 569
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
R I + L M + GY+P T+ HD+E+E K+ L YHS R AI FG ++T G
Sbjct: 570 QREEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPG 629
Query: 114 RTIRLINNL 122
+ +I NL
Sbjct: 630 TRLVIIKNL 638
>gi|297820962|ref|XP_002878364.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324202|gb|EFH54623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 767
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 69/129 (53%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HP 53
NN YV+LSN Y+AA R + A +R ++++ + K P CSW E K HP
Sbjct: 580 NNAVPYVLLSNMYSAAGRQDEAANVRRLMKSRNINKEPGCSWVEEKGKVHSFMSEDRRHP 639
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+ I + ++ +++ GY+ ALHD++ E K+ L YHS + A+ FG + P G
Sbjct: 640 RMVEIYSKVDEMMLLIKEAGYLADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSG 699
Query: 114 RTIRLINNL 122
IR+I NL
Sbjct: 700 APIRIIKNL 708
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 67/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV LSN YA ++W A++R + +G+KK S EI +HP I
Sbjct: 663 YVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREI 722
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L L +M++ GYVP TK LH V++++K+ LL HS R AI G ISTP G +R+
Sbjct: 723 REELAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRV 782
Query: 119 INNL 122
NL
Sbjct: 783 TKNL 786
>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Vitis vinifera]
Length = 594
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+LSN YAA RW++ AR R ++ KK SW EIK +HP + I
Sbjct: 428 HVLLSNIYAANDRWEEVARARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEI 487
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+DL M++ GY T+ LHDVE+ +K+ LL +HS + A+ FG + P G IR+
Sbjct: 488 YLKLEDLVGEMKKIGYKAKTEHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIRI 547
Query: 119 INNL 122
+ NL
Sbjct: 548 MKNL 551
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 67/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV LSN YA ++W A++R + +G+KK S EI +HP I
Sbjct: 576 YVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREI 635
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L L +M++ GYVP TK LH V++++K+ LL HS R AI G ISTP G +R+
Sbjct: 636 REELAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRV 695
Query: 119 INNL 122
NL
Sbjct: 696 TKNL 699
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 71/128 (55%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPY 54
N YV+LSN YA + W + + +R S+++KG++K P CS E+ KSHP
Sbjct: 442 NHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPK 501
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+I+ KD+ R+ GY T + D+++E+K++ L HS + AI FG +S +
Sbjct: 502 YTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDV 561
Query: 115 TIRLINNL 122
IR++ NL
Sbjct: 562 PIRIVKNL 569
>gi|222624541|gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japonica Group]
Length = 669
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 66/124 (53%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA A RW D + +R + +KG+KK P S E+ SHP I
Sbjct: 388 YVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGDTSHPQSKMI 447
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L +L R+ + GY P + LHDVE+E K+ L HS + AI F I+T G IR+
Sbjct: 448 YKKLSELLRRIREMGYNPEVEATLHDVEEEDKEGHLSVHSEKLAIAFLLINTNPGTPIRI 507
Query: 119 INNL 122
NL
Sbjct: 508 TMNL 511
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 66/124 (53%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
Y +LS+ YA+ +W A+LR +R K +KK P SW + K S PY +I
Sbjct: 577 YTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQI 636
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L++L ++ GY P T HDVE+ K +L+YHS R AI FG I P G+ IR+
Sbjct: 637 YAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRV 696
Query: 119 INNL 122
NL
Sbjct: 697 GKNL 700
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV LSN YA++ W A +RV +R KG+ K S EI KSHP I
Sbjct: 561 YVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEI 620
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+ L R+++ G+VP T+ LHD+ E+K+ L +HS R A+ +G IST G T+R+
Sbjct: 621 FDELQRLERRLKEVGFVPYTESVLHDLNYEEKEENLSFHSERIAVAYGLISTAPGTTLRI 680
Query: 119 INNL 122
NL
Sbjct: 681 TKNL 684
>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
Length = 810
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 66/124 (53%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA A RW D + +R + +KG+KK P S E+ SHP I
Sbjct: 498 YVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGDTSHPQSKMI 557
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L +L R+ + GY P + LHDVE+E K+ L HS + AI F I+T G IR+
Sbjct: 558 YKKLSELLRRIREMGYNPEVEATLHDVEEEDKEGHLSVHSEKLAIAFLLINTNPGTPIRI 617
Query: 119 INNL 122
NL
Sbjct: 618 TMNL 621
>gi|302785459|ref|XP_002974501.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
gi|300158099|gb|EFJ24723.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
Length = 635
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 65/124 (52%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV LSN YA A RW D AR+R + +G+ K S EI SHP + I
Sbjct: 469 YVALSNLYALAERWDDMARMRKLMDQRGVFKMAGKSSIEIGGVLHEFIAGDTSHPRKREI 528
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L+ + + + GYVP K LH+ E K+ + +HS R AI FG IS+P G +R+
Sbjct: 529 YEELRRIEGVIRERGYVPDIKAVLHNAAREAKEKMCCFHSERLAIAFGMISSPGGTELRI 588
Query: 119 INNL 122
+ NL
Sbjct: 589 MKNL 592
>gi|125528625|gb|EAY76739.1| hypothetical protein OsI_04695 [Oryza sativa Indica Group]
Length = 494
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN Y+ ARRW D AR+R +R++G+ K P CSW + + H I
Sbjct: 328 YVMLSNLYSRARRWGDVARVRALMRSRGISKEPGCSWVVVAGVTHVFHAGDRDHQRAAEI 387
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+++ R+ G+VP T+ AL D E ++ L +H R A+ FG ++ P IR+
Sbjct: 388 YRKAEEMAARIRARGHVPDTEWALQDEAPEGREMGLAHHGERLAVAFGLLAVPAAAPIRV 447
Query: 119 INNL 122
NL
Sbjct: 448 YKNL 451
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 66/125 (52%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTE------------IKSHPYRLR 57
YV+LS+ Y + RW+D + +R + ++ + K+P CSW E + SHP
Sbjct: 539 YVLLSHIYTSTGRWEDASDMRKFISSRNLNKSPGCSWIEYNKMVHLFTSGDVLSHPEHAI 598
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I L++L + + GY LHDV++EQK L YHS R A+ +G + P G IR
Sbjct: 599 ILNMLEELDGLLMESGYSADGSFVLHDVDEEQKAQSLRYHSERQAVAYGLLKVPAGMPIR 658
Query: 118 LINNL 122
++ NL
Sbjct: 659 VMKNL 663
>gi|218192417|gb|EEC74844.1| hypothetical protein OsI_10704 [Oryza sativa Indica Group]
Length = 614
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 66/124 (53%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA A RW D + +R + +KG+KK P S E+ SHP I
Sbjct: 333 YVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDSVHTFHIGDTSHPQSKMI 392
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L +L R+ + GY P + LHDVE+E K+ L HS + AI F I+T G IR+
Sbjct: 393 YKKLSELLRRIREMGYNPEVEATLHDVEEEDKEGHLSVHSEKLAIAFLLINTNPGTPIRI 452
Query: 119 INNL 122
NL
Sbjct: 453 TMNL 456
>gi|413932592|gb|AFW67143.1| hypothetical protein ZEAMMB73_912965 [Zea mays]
Length = 619
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA RRWK+ + +R + +G+KK P CS E+ +SHP I
Sbjct: 453 YVMLSNVYALTRRWKEKSEIRREMSKRGIKKVPGCSLVELDGEVHEFIAGDESHPQWKEI 512
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
++++ + + G++ T E L D+++E K+ L +HS + AI F + TP G +R+
Sbjct: 513 YMMVEEMARELRRAGHISATSEVLLDLDEEDKEVALQWHSEKLAIAFVLLRTPPGTQVRV 572
Query: 119 INNL 122
+ NL
Sbjct: 573 VKNL 576
>gi|45935146|gb|AAS79604.1| putative pentatricopeptide repeat-containing protein [Ipomoea
trifida]
gi|118562903|dbj|BAF37793.1| hypothetical protein [Ipomoea trifida]
Length = 575
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+L N YAA +W++ A+ R + +G+ K PACS EI H +
Sbjct: 409 YVLLENVYAATGKWEEKAKTRELMYQRGLMKPPACSRIEIDGVVHEFTAGDSRHDEATAV 468
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L+D+ ER+ EGY P E L +++D++K + L +HS + A+ FG + + G IR+
Sbjct: 469 YEKLEDVEERLRGEGYNPIVSEVLLEIDDDEKASQLLHHSEKLAVSFGLVKSSPGSVIRI 528
Query: 119 INNL 122
+ NL
Sbjct: 529 VKNL 532
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 75/133 (56%), Gaps = 12/133 (9%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++ +++ +V+L+N Y+A+ +W + +R + G KKTP CS E+ +
Sbjct: 449 LDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDR 508
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQ-KKNLLHYHSGRFAIVFGAIS 109
SHP ++ L ++ +++ GYVP E L D++DE+ K+ L HS + AI FG I+
Sbjct: 509 SHPQTKQLYLFLDEMTTKLKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLIN 568
Query: 110 TPDGRTIRLINNL 122
TP G IR++ NL
Sbjct: 569 TPPGTAIRIVKNL 581
>gi|302794404|ref|XP_002978966.1| hypothetical protein SELMODRAFT_109758 [Selaginella moellendorffii]
gi|300153284|gb|EFJ19923.1| hypothetical protein SELMODRAFT_109758 [Selaginella moellendorffii]
Length = 318
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 72/125 (57%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK------------SHPYRLR 57
YV+LSN +AAA + A++R + +G++K P S EI HP + +
Sbjct: 151 YVLLSNIHAAAGDHAEKAKVRDLMEARGVRKKPGWSTIEINDRFHEFTAGEKFQHPKKQQ 210
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I E LK L M++ GYVP T E L V +++K++LL +HS + AI G ISTP G T+R
Sbjct: 211 ILEELKRLSVLMKEAGYVPDTTEVLRLVNEDEKESLLFFHSEKLAITCGLISTPPGTTLR 270
Query: 118 LINNL 122
++ NL
Sbjct: 271 VVKNL 275
>gi|302816501|ref|XP_002989929.1| hypothetical protein SELMODRAFT_428483 [Selaginella moellendorffii]
gi|300142240|gb|EFJ08942.1| hypothetical protein SELMODRAFT_428483 [Selaginella moellendorffii]
Length = 347
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 70/133 (52%), Gaps = 12/133 (9%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++ ++ Y+ +SN YAA W+ A +R + +G+KK P S+ E+ K
Sbjct: 171 LDPSSTASYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGK 230
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
HP I E L L M GYVP TK LHDV + +K+ +L YHS + AI FG +S+
Sbjct: 231 YHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSS 290
Query: 111 -PDGRTIRLINNL 122
G IR++ NL
Sbjct: 291 RGSGEPIRVVKNL 303
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+LSN YA A+RW + A +R +++ K +KK P SW E + SHP I
Sbjct: 614 HVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLI 673
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L+++ GYVP L DVED++K+ LL HS R A+ FG I P G +IR+
Sbjct: 674 FAMLEWLYKKTRDAGYVPDCSVVLLDVEDDEKERLLWMHSERLALAFGLIQIPSGCSIRI 733
Query: 119 INNL 122
I NL
Sbjct: 734 IKNL 737
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRL-----------RI 58
YV+L++ YA A+ W + + + +G++K P CSW E+K Y I
Sbjct: 492 YVLLADIYAEAKLWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEI 551
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L L M+ +GYVP T L+D+++E+K+ ++ HS + A+ FG I+T G TIR+
Sbjct: 552 HALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTAKGETIRI 611
Query: 119 INNL 122
NL
Sbjct: 612 RKNL 615
>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 70/123 (56%), Gaps = 11/123 (8%)
Query: 11 VILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRIN 59
V+L N YA+ +W D AR+R ++ G+KK PACSW +I+ +HP I
Sbjct: 365 VLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIY 424
Query: 60 EALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLI 119
+++ R+++ GYVP T L + +++++ L YHS + A+ F I+ P G +IR++
Sbjct: 425 RMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIM 484
Query: 120 NNL 122
N+
Sbjct: 485 KNI 487
>gi|297720639|ref|NP_001172681.1| Os01g0884800 [Oryza sativa Japonica Group]
gi|20161229|dbj|BAB90156.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|255673935|dbj|BAH91411.1| Os01g0884800 [Oryza sativa Japonica Group]
Length = 517
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN Y+ ARRW D AR+R +R++G+ K P CSW + + H I
Sbjct: 351 YVMLSNLYSRARRWGDVARVRALMRSRGISKEPGCSWVVVAGVTHVFHAGDRDHQRAAEI 410
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+++ R+ G+VP T+ AL D E ++ L +H R A+ FG ++ P IR+
Sbjct: 411 YRKAEEMAARIRARGHVPDTEWALQDEAPEGREMGLAHHGERLAVAFGLLAVPAAAPIRV 470
Query: 119 INNL 122
NL
Sbjct: 471 YKNL 474
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++ +N+ +V+LSN ++A R + A +R + + + + K P + EI +
Sbjct: 618 LDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQ 677
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
SHP I E L+ L +M + GY P T+ ALHDVE+E+++ ++ HS R AI FG I+T
Sbjct: 678 SHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIAT 737
Query: 111 PDGRTIRLINNL 122
G IR+I NL
Sbjct: 738 EPGTEIRIIKNL 749
>gi|302818245|ref|XP_002990796.1| hypothetical protein SELMODRAFT_429215 [Selaginella moellendorffii]
gi|300141357|gb|EFJ08069.1| hypothetical protein SELMODRAFT_429215 [Selaginella moellendorffii]
Length = 312
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
Y++LSN YAA ++W + A++R + G++K SW EI HP + RI
Sbjct: 146 YIMLSNLYAALKKWDEAAKVRKRMEQAGVRKQAGRSWIEIDKQVHEFVAGDSIHPDKSRI 205
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+ L M +GY P K +H +E+E+K +L YHS + A+ FG STP + +
Sbjct: 206 FKTLQRLMSEMRIKGYEPDRKVVIHSMEEEEKDEVLFYHSEKLAVAFGIASTPPRTPLCI 265
Query: 119 INNL 122
+ NL
Sbjct: 266 VENL 269
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI--KSHPYRL--- 56
+N+ N +YV+LSN YA+ ++ A++R ++ KG+ K P S EI K H +R
Sbjct: 458 LNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDR 517
Query: 57 ------RINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
I L+ + ER++ GYVP T L D+E+ +K+ L HS R AI +G IST
Sbjct: 518 EHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLIST 577
Query: 111 PDGRTIRLINNL 122
G +++ NL
Sbjct: 578 KPGSPLKIFKNL 589
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 75/133 (56%), Gaps = 12/133 (9%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++ +++ +V+L+N Y+A+ +W + +R + G KKTP CS E+ +
Sbjct: 364 LDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDR 423
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQ-KKNLLHYHSGRFAIVFGAIS 109
SHP ++ L ++ +++ GYVP E L D++DE+ K+ L HS + AI FG I+
Sbjct: 424 SHPQTKQLYLFLDEMTTKLKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLIN 483
Query: 110 TPDGRTIRLINNL 122
TP G IR++ NL
Sbjct: 484 TPPGTAIRIVKNL 496
>gi|367059928|gb|AEX10959.1| hypothetical protein 0_10719_01 [Pinus taeda]
gi|367059930|gb|AEX10960.1| hypothetical protein 0_10719_01 [Pinus taeda]
gi|367059932|gb|AEX10961.1| hypothetical protein 0_10719_01 [Pinus taeda]
gi|367059934|gb|AEX10962.1| hypothetical protein 0_10719_01 [Pinus taeda]
gi|367059936|gb|AEX10963.1| hypothetical protein 0_10719_01 [Pinus taeda]
gi|367059938|gb|AEX10964.1| hypothetical protein 0_10719_01 [Pinus taeda]
gi|367059940|gb|AEX10965.1| hypothetical protein 0_10719_01 [Pinus taeda]
gi|367059942|gb|AEX10966.1| hypothetical protein 0_10719_01 [Pinus taeda]
gi|367059944|gb|AEX10967.1| hypothetical protein 0_10719_01 [Pinus taeda]
gi|367059946|gb|AEX10968.1| hypothetical protein 0_10719_01 [Pinus taeda]
gi|367059948|gb|AEX10969.1| hypothetical protein 0_10719_01 [Pinus taeda]
Length = 153
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 63/109 (57%), Gaps = 11/109 (10%)
Query: 25 DTARLRVSVRNKGMKKTPACSWTEIKSHPYRLRINEA-----------LKDLFERMEQEG 73
D ++R ++ + +KK P CSW E+ + Y I E L+ L +M++ G
Sbjct: 2 DVGKVRKMMKERDVKKIPGCSWVEVNNKVYAFAIGEQQYLQKQKIFAELERLSGQMKEAG 61
Query: 74 YVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
YVP LHDVEDEQK+++L++HS + A+ FG I+T G IR+I NL
Sbjct: 62 YVPDKNFVLHDVEDEQKEHVLYHHSEKLALAFGLINTSPGNPIRIIKNL 110
>gi|302818247|ref|XP_002990797.1| hypothetical protein SELMODRAFT_132418 [Selaginella moellendorffii]
gi|300141358|gb|EFJ08070.1| hypothetical protein SELMODRAFT_132418 [Selaginella moellendorffii]
Length = 281
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 65/124 (52%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV LSN YA A RW D AR+R + +G+ K S EI SHP + I
Sbjct: 115 YVALSNLYALAERWDDMARMRKLMDQRGVFKMAGKSSIEIGGVLHEFIAGDTSHPRKREI 174
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L+ + + + GYVP K LH+ E K+ + +HS R AI FG IS+P G +R+
Sbjct: 175 YEELRRIEGVIRERGYVPDIKAVLHNAAREAKEKMCCFHSERLAIAFGMISSPGGTELRI 234
Query: 119 INNL 122
+ NL
Sbjct: 235 MKNL 238
>gi|297746380|emb|CBI16436.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 75/133 (56%), Gaps = 12/133 (9%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++ +++ +V+L+N Y+A+ +W + +R + G KKTP CS E+ +
Sbjct: 370 LDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDR 429
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQ-KKNLLHYHSGRFAIVFGAIS 109
SHP ++ L ++ +++ GYVP E L D++DE+ K+ L HS + AI FG I+
Sbjct: 430 SHPQTKQLYLFLDEMTTKLKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLIN 489
Query: 110 TPDGRTIRLINNL 122
TP G IR++ NL
Sbjct: 490 TPPGTAIRIVKNL 502
>gi|255551705|ref|XP_002516898.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543986|gb|EEF45512.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 406
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 67/125 (53%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRL--------RINEA 61
YV LSN YA A W++ LR ++ G+ K P CSW EIK Y R NE
Sbjct: 239 YVTLSNTYALAGEWENAYYLRSQMKRVGVYKEPGCSWVEIKDSTYVFYAGNLSCERGNEV 298
Query: 62 ---LKDLFERMEQEGYVPTTKEALH-DVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
LK+L RM++ GYV + + DVE E K+ ++ HS R A+ F +S P G T+R
Sbjct: 299 LNFLKELERRMKERGYVGGSMGLVFVDVEQEAKEEIVSLHSERLALAFALLSIPKGITVR 358
Query: 118 LINNL 122
++ NL
Sbjct: 359 VMKNL 363
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRL-----------RI 58
YV+L++ YA A+ W + + + +G++K P CSW E+K Y I
Sbjct: 492 YVLLADIYAEAKMWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEI 551
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L L M+ +GYVP T L+D+++E+K+ ++ HS + A+ FG I+T G TIR+
Sbjct: 552 HALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTVKGETIRI 611
Query: 119 INNL 122
NL
Sbjct: 612 RKNL 615
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 67/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YAA W+ +R ++ +G++K P SW E+ SHP I
Sbjct: 742 YVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEI 801
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
LKDL +R++ EGYVP T+ L + + E K+ L HS + AIV+G + TP IR+
Sbjct: 802 YAKLKDLIKRLKAEGYVPDTRLVLRNTDQEYKEQALCSHSEKLAIVYGLMHTPYRNPIRV 861
Query: 119 INNL 122
NL
Sbjct: 862 YKNL 865
>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
Length = 615
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
Y++LSN YAA ++W + A++R + G++K SW EI HP + RI
Sbjct: 449 YIMLSNLYAALKKWDEAAKVRKRMEQAGVRKQAGRSWIEIDKQVHEFVAGDSIHPDKSRI 508
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+ L M +GY P K +H +E+E+K +L YHS + A+ FG STP + +
Sbjct: 509 FKTLQRLMSEMRIKGYEPDRKVVIHSMEEEEKDEVLFYHSEKLAVAFGIASTPPRTPLCI 568
Query: 119 INNL 122
+ NL
Sbjct: 569 VKNL 572
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 84.7 bits (208), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK------------SHPYRLR 57
Y +LSN YA A RW++ +R ++ +G+K TP S ++ SHP
Sbjct: 505 YTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKD 564
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I + L + ER++ EGY P + L D+++E+K+ + HS + AI FG I+T G TIR
Sbjct: 565 IYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIR 624
Query: 118 LINNL 122
++ NL
Sbjct: 625 IVKNL 629
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 11/127 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPY 54
N YV+L+N YA A RW+ +L+ + +G+++ SW E++S HP
Sbjct: 921 NTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGYSWIEVRSKVHVFIADNRNHPD 980
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
RI E L D+ RM QEG+ P K AL +D L HS + A+ FG ++ P+GR
Sbjct: 981 WNRIAEFLDDVARRMRQEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLNLPEGR 1040
Query: 115 TIRLINN 121
IR+ N
Sbjct: 1041 PIRVTKN 1047
>gi|359481819|ref|XP_002283419.2| PREDICTED: MATE efflux family protein 1 [Vitis vinifera]
Length = 977
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 67/121 (55%), Gaps = 11/121 (9%)
Query: 13 LSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTE-----------IKSHPYRLRINEA 61
L +AA R+++ AR R +R++G+KK SW E +SHPY I +
Sbjct: 308 LGPVSSAAGRYEEAARARKMLRDQGVKKETGLSWVEEGNRIHTFAAGDRSHPYTKDIYKK 367
Query: 62 LKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINN 121
L++L E ME+ GY+ T L +V+ E+K + YHS R AI FG IS P R IR++ N
Sbjct: 368 LEELGEEMERAGYIADTSFVLQEVDGEEKNQTIRYHSERLAIAFGLISFPPERPIRVMKN 427
Query: 122 L 122
L
Sbjct: 428 L 428
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 70/123 (56%), Gaps = 11/123 (8%)
Query: 11 VILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRIN 59
V+L N YA+ +W D AR+R ++ G+KK PACSW +I+ +HP I
Sbjct: 468 VLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIY 527
Query: 60 EALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLI 119
+++ R+++ GYVP T L + +++++ L YHS + A+ F I+ P G +IR++
Sbjct: 528 RMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIM 587
Query: 120 NNL 122
N+
Sbjct: 588 KNI 590
>gi|357114903|ref|XP_003559233.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 611
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA +RWK+ + +R + +G+KK P CS E+ +SHP I
Sbjct: 445 YVMLSNVYALTQRWKEKSEIRREMSKRGIKKVPGCSLVELDGEVHEFIAGDESHPQYKEI 504
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
++++ + + G++ T E L D+++E K+ L +HS + AI F + TP G +R+
Sbjct: 505 YRMVEEMSRELRRIGHIAATSEVLLDLDEEDKEGALQWHSEKLAIAFVLLRTPPGTQVRV 564
Query: 119 INNL 122
+ NL
Sbjct: 565 VKNL 568
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
Y++LSN YA+ +WK+ A +R ++++G++KTP CS E+ HP I
Sbjct: 527 YILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIELDGVVVEFFAEDSDHPQLKEI 586
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ ++++ +R++ GY+P T + +V++ +K+ + +HS + AI FG + G TIRL
Sbjct: 587 YQKVEEMIDRIKMAGYIPNTADVRLEVDEHEKEVSVSHHSEKLAIAFGLMKLDPGATIRL 646
Query: 119 INNL 122
NL
Sbjct: 647 SKNL 650
>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
Length = 681
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHP 53
+++ V ++SN YAA ++W ++R +++ G KK P CS EI+ SHP
Sbjct: 510 DDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHAFLMEDQSHP 569
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
R I + L M + GY+P T+ HD+E+E K+ L YHS + AI FG ++T G
Sbjct: 570 QREEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSEKLAIAFGLLNTGPG 629
Query: 114 RTIRLINNL 122
+ +I NL
Sbjct: 630 TRLVIIKNL 638
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK------------SHPYRLR 57
Y +LSN YA A RW++ +R ++ +G+K TP S ++ SHP
Sbjct: 457 YTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKD 516
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I + L + ER++ EGY P + L D+++E+K+ + HS + AI FG I+T G TIR
Sbjct: 517 IYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIR 576
Query: 118 LINNL 122
++ NL
Sbjct: 577 IVKNL 581
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN Y + RW D +R S+ G+KKT S E+ +SHP +
Sbjct: 429 YVLLSNLYTSECRWADVQLIRRSMLKDGVKKTSGYSLVELGNRVYEFTMGNRSHPQSQDV 488
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ + E ++ EGYVP T L D+E+E+K+ L YHS + AI F ++T G TIR+
Sbjct: 489 YALLEKITELLKLEGYVPHTANVLADIEEEEKEQALSYHSEKXAIAFMRLNTAPGTTIRV 548
Query: 119 INNL 122
+ NL
Sbjct: 549 MKNL 552
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+L N Y++ W LR ++ KG++ +P CS E+K HP I
Sbjct: 477 YVLLLNIYSSVGNWDKVTDLRKFMKEKGIQTSPGCSTIELKGKVHEFVVDDILHPRTDEI 536
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L ++ ++++ GYV LH++ E+K N L YHS + AI FG ++TP G TIR+
Sbjct: 537 YEMLDEIGKQLKIAGYVAELSSELHNLGAEEKGNRLSYHSEKLAIAFGVLATPPGTTIRV 596
Query: 119 INNL 122
NL
Sbjct: 597 AKNL 600
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK------------SHPYRLR 57
Y +LSN YA A RW++ +R ++ +G+K TP S ++ SHP
Sbjct: 506 YTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKD 565
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I + L + ER++ EGY P + L D+++E+K+ + HS + AI FG I+T G TIR
Sbjct: 566 IYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIR 625
Query: 118 LINNL 122
++ NL
Sbjct: 626 IVKNL 630
>gi|242032459|ref|XP_002463624.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
gi|241917478|gb|EER90622.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
Length = 607
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA +RWK+ + +R + +G+KK P CS E+ +SHP I
Sbjct: 441 YVMLSNVYALTQRWKEKSEIRREMSKRGIKKVPGCSLVELDGEVHEFIAGDESHPQWKEI 500
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
++++ ++ G++ T E L D+++E K+ L +HS + AI F + TP G +R+
Sbjct: 501 YMMVEEMARELKHVGHISATSEVLLDLDEEDKEGALQWHSEKLAIAFVLLRTPPGTQVRV 560
Query: 119 INNL 122
+ NL
Sbjct: 561 VKNL 564
>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g01510, mitochondrial; Flags: Precursor
gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 584
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 66/124 (53%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
+V+LSN YAAA +W ++R +R G KK A S E KSHP I
Sbjct: 418 HVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAI 477
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L ++ +++ + GYVP T HDVE E+K+ L +HS + AI FG I G IR+
Sbjct: 478 YEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRV 537
Query: 119 INNL 122
+ NL
Sbjct: 538 MKNL 541
>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 558
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN Y RW + A +R S+R K + K P CS + +HP I
Sbjct: 392 YVLLSNVYGGVGRWAEKAGVRNSMREKRISKKPGCSLINVNHLIHEFVAGDNNHPQFESI 451
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L + + ++ GY P L D+E+E+K++ L YHS + A+ F + D RTIR+
Sbjct: 452 REFLVSMIDSLKVVGYTPDISNVLFDIEEEEKESTLGYHSEKLAVAFALLCFKDSRTIRV 511
Query: 119 INNL 122
+ NL
Sbjct: 512 MKNL 515
>gi|414592000|tpg|DAA42571.1| TPA: hypothetical protein ZEAMMB73_154468 [Zea mays]
Length = 872
Score = 84.7 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 45/124 (36%), Positives = 65/124 (52%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWT-----------EIKSHPYRLRI 58
YV+ SN + + RW+ + R+ + KGM+K PA SWT KSHP I
Sbjct: 708 YVLTSNLLSESARWRSSENTRLEMYEKGMRKIPARSWTFHGNMVHSFFARDKSHPQSRDI 767
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L L + GY P T LHDVE+ QK++ L YHS + A ++G + G+TIR+
Sbjct: 768 YAGLDVLILECIKAGYEPDTTFVLHDVEEYQKRHFLMYHSMKLASMYGLLMAGPGQTIRV 827
Query: 119 INNL 122
+ N+
Sbjct: 828 VKNI 831
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 70/128 (54%), Gaps = 11/128 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HP 53
+N R YV+L+N YA A +W++ +LR ++ +G K+ P CSW E+ HP
Sbjct: 973 DNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHP 1032
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
RI+ L+ L +M+ E Y + L + +D +K+ + HS + A+ FG ++ P G
Sbjct: 1033 QAKRIDVLLRKLTMQMQNEDYFSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPG 1092
Query: 114 RTIRLINN 121
RT+R+ N
Sbjct: 1093 RTVRVSKN 1100
>gi|297792601|ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310020|gb|EFH40444.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 69/125 (55%), Gaps = 11/125 (8%)
Query: 9 VYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLR 57
+++ LSNAYAA R++D A+ R +R++G KK SW E ++ H
Sbjct: 421 MHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHERSKE 480
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I E L +L E ME+ GYV T L +V+ ++K + YHS R AI FG I+ P R IR
Sbjct: 481 IYEKLAELGEEMEKAGYVADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIR 540
Query: 118 LINNL 122
++ NL
Sbjct: 541 VMKNL 545
>gi|147806246|emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
Length = 558
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN Y RW + A +R S+R K + K P CS + +HP I
Sbjct: 392 YVLLSNVYGGVGRWAEKAGVRNSMREKRISKKPGCSLINVNHLIHEFVAGDNNHPQFESI 451
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L + + ++ GY P L D+E+E+K++ L YHS + A+ F + D RTIR+
Sbjct: 452 REFLVSMIDSLKVVGYTPDISNVLFDIEEEEKESTLGYHSEKLAVAFALLCFKDSRTIRV 511
Query: 119 INNL 122
+ NL
Sbjct: 512 MKNL 515
>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 840
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+LSN ++ A RW+D A +R +++ G+ + P SW E+KS HP I
Sbjct: 609 YVLLSNMFSVAGRWEDAAHIRRAMKTMGIXQEPGYSWIEMKSQVHTFISEDRSHPLAAEI 668
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ ++ +++ G+VP AL D+++E K+ L YHS + A+ FG ++ G IR+
Sbjct: 669 YSKIDEMMILIKEAGHVPDMNFALRDMDEEAKERSLAYHSEKLAVAFGLLTVAKGAPIRI 728
Query: 119 INNL 122
NL
Sbjct: 729 FKNL 732
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 12/124 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+L+N Y AA W+ ++RVS+ +G++KTP CS EIK +HP +I
Sbjct: 644 HVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKKI 703
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L ++++ GYVP T L +ED+ K+ LL HS + AI FG ++T G TI +
Sbjct: 704 YAFLEKLICQIKEAGYVPDTNLIL-GLEDDVKEQLLSSHSEKLAISFGLLNTTAGTTIHV 762
Query: 119 INNL 122
NL
Sbjct: 763 RKNL 766
>gi|125572887|gb|EAZ14402.1| hypothetical protein OsJ_04322 [Oryza sativa Japonica Group]
Length = 490
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN Y+ ARRW D AR+R +R++G+ K P CSW + + H I
Sbjct: 324 YVMLSNLYSRARRWGDVARVRALMRSRGISKEPGCSWVVVAGVTHVFHAGDRDHQRAAEI 383
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+++ R+ G+VP T+ AL D E ++ L +H R A+ FG ++ P IR+
Sbjct: 384 YRKAEEMAARIRARGHVPDTEWALQDEAPEGREMGLAHHGERLAVAFGLLAVPAAAPIRV 443
Query: 119 INNL 122
NL
Sbjct: 444 YKNL 447
>gi|190612861|gb|ACE80808.1| pentatricopeptide repeat protein [Pinus nigra]
Length = 153
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 69/116 (59%), Gaps = 12/116 (10%)
Query: 19 AARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRINEALKDLFE 67
AA RW D R+R ++++G+KKTP SW ++ +SHP I L+ L
Sbjct: 2 AAGRWDDIERVRKLMKDRGVKKTPGYSWIKVNKQLHAFLVGDRSHPQMEEIYMELERLPL 61
Query: 68 RMEQEGYVPTTKEALHDVEDEQKKN-LLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
ME GYV T L+DV++E+K+ LL++HS + AI FG ++TP G TIR++ NL
Sbjct: 62 EMEMAGYVANTGFVLNDVKEEEKEQILLNHHSEKLAIAFGLLNTPPGTTIRVVKNL 117
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRL-----------RI 58
Y+ LSNAYAA +W+D R+RV ++N+G+ K S E++ +R I
Sbjct: 553 YIFLSNAYAALGQWEDAERVRVLMQNRGVHKNSGWSCIEVEGQVHRFVSGDHDHKDSKAI 612
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+++ ++GY+P T+ LH++E E+K+++L H + A+ F I T G TIR+
Sbjct: 613 CLKLEEIMAGAVKQGYIPGTEWVLHNMEQEEKEDVLGSHGEKLALAFALICTSPGMTIRI 672
Query: 119 INNL 122
+ NL
Sbjct: 673 VKNL 676
>gi|190612983|gb|ACE80869.1| pentatricopeptide repeat protein [Thyrsopteris elegans]
Length = 152
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRINEALKDLF 66
A+ +W + ++R + +G+KK CS E+ +SHP I L+ L
Sbjct: 1 ASEGKWDEELKMRKLMVERGVKKQAGCSAIEVGDVVHEFIVRDRSHPRTEEIYAELEKLN 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
+M+ EGYVP T LHDVE+E K++LL YHS + AI FG ISTP G + ++ NL
Sbjct: 61 LQMKVEGYVPDTNLVLHDVEEELKEHLLSYHSEKLAIAFGLISTPHGTPLHIVKNL 116
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV++SN YA+ RW ++R +++K KK S EI +SHP R +I
Sbjct: 414 YVLVSNVYASLGRWSSVCQVRSLMKDKAPKKQHGWSSIEINFMVHKFIMGDESHPEREKI 473
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L + +++Q G+V +T + LHD+++E+K+ L HS R AI +G + TP+G IR+
Sbjct: 474 YGMLHQMARKLKQVGHVNSTVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRI 533
Query: 119 INNL 122
+ NL
Sbjct: 534 VKNL 537
>gi|334183024|ref|NP_174678.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806500|sp|Q9FX24.2|PPR71_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g34160
gi|332193557|gb|AEE31678.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 581
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 74/135 (54%), Gaps = 14/135 (10%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
+ +NN +V+LSN YAA RWKD R+R + +K +KK P S+ E K
Sbjct: 404 MGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDK 463
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAI-- 108
SH I E + ++ ++ ++GYV T LHD+ +E+K+N L YHS + A+ +G +
Sbjct: 464 SHEQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMM 523
Query: 109 -STPDGRTIRLINNL 122
+ +R+INNL
Sbjct: 524 DGADEESPVRVINNL 538
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA R+ D +++R ++++G+K P S ++ SHP I
Sbjct: 500 YVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEI 559
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
LK + ER++ G+ P T + L D+++E+K+ ++YHS + AI FG I+T G+ I +
Sbjct: 560 YRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHI 619
Query: 119 INNL 122
+ NL
Sbjct: 620 VKNL 623
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 66/124 (53%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YAA +W+ +R ++ KG++K P SW E+ SHP I
Sbjct: 931 YVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEI 990
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L DL ER++ +GYVP T+ L + + E K+ L HS + AIV+G + T IR+
Sbjct: 991 YAQLNDLIERLKAKGYVPDTRLVLRNTDQEHKEQALCSHSEKLAIVYGLMHTQSKDPIRV 1050
Query: 119 INNL 122
NL
Sbjct: 1051 YKNL 1054
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTE------------I 49
I N Y++LS+ A+ +W D A +R ++R K + K P CSW E I
Sbjct: 529 IEPENAGPYILLSSINASRSKWGDVAEMRKNMRTKNVSKFPGCSWIEVGKKVHMFTRGGI 588
Query: 50 KSHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIS 109
++HP + I L+ + + GY P LHDV++E+K + L HS R A+ +G +
Sbjct: 589 RNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLK 648
Query: 110 TPDGRTIRLINNL 122
P+G IR++ NL
Sbjct: 649 LPEGVPIRVMKNL 661
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV LSN +A+ W+ ++R+ ++ ++K P CSW E+ SHP I
Sbjct: 463 YVALSNMFASEGNWEGVVKVRLKMKELDIRKDPGCSWIELDGVIHEFLVEDDSHPRAEGI 522
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+++ +R+ GY P T + L ++++++K++ LHYHS + AI FG IST +++
Sbjct: 523 HSMLEEMSDRLRSVGYRPNTTQVLLNMDEKEKQSALHYHSEKIAIAFGLISTRPQTPLQI 582
Query: 119 INNL 122
+ NL
Sbjct: 583 VKNL 586
>gi|15237212|ref|NP_200075.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
gi|75180446|sp|Q9LTF4.1|PP429_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g52630
gi|8953718|dbj|BAA98081.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332008860|gb|AED96243.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
Length = 588
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 11/125 (8%)
Query: 9 VYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLR 57
+++ LSNAYAA R++D A+ R +R++G KK SW E ++ H
Sbjct: 421 MHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKE 480
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I E L +L E ME+ GY+ T L +V+ ++K + YHS R AI FG I+ P R IR
Sbjct: 481 IYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIR 540
Query: 118 LINNL 122
++ NL
Sbjct: 541 VMKNL 545
>gi|413934702|gb|AFW69253.1| hypothetical protein ZEAMMB73_589560 [Zea mays]
Length = 664
Score = 84.3 bits (207), Expect = 9e-15, Method: Composition-based stats.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK------------SHPYRLR 57
YV+LSN A+A W + ++LR +R +G+KK PA SW E + +HP
Sbjct: 497 YVLLSNTLASAGEWDEVSKLRKLMRIRGLKKDPAVSWFEGRDGFVHQFFAGDNTHPSMHE 556
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
I + L +L E++ GYVP +++V +E+K+ LL HS + A+ FG ++ +IR
Sbjct: 557 IKKRLLELREKLNLAGYVPILSSVVYNVSEEEKERLLMGHSEKLALSFGLLTLESRSSIR 616
Query: 118 LINNL 122
++ NL
Sbjct: 617 IVKNL 621
>gi|449436862|ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
gi|449508034|ref|XP_004163198.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
Length = 606
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRL-----------RI 58
Y++LSN YA A++W++ A++R + N+G+ +TP S E+KS Y+ I
Sbjct: 440 YLVLSNMYARAQQWENAAKIRTKMINRGLIQTPGYSLVEVKSKVYKFVSQDKSYCKSGNI 499
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ + + ++ EGY+P T + + DV++E+K L HS + AI F I T G IR+
Sbjct: 500 YKMIHQMEWQLRFEGYMPDTSQVMLDVDEEEKGERLKGHSQKLAIAFALIHTSQGSAIRI 559
Query: 119 INNL 122
I NL
Sbjct: 560 IRNL 563
>gi|224140235|ref|XP_002323489.1| predicted protein [Populus trichocarpa]
gi|222868119|gb|EEF05250.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 67/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV++SN YAA+ RW + +R ++R++G++K P SW IK SHP I
Sbjct: 749 YVLVSNLYAASGRWHCSEMVRENMRDRGLRKHPCRSWVIIKKQLHTFYARDKSHPQSNDI 808
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L L + + GY P L +VE++QKK+ L YHS + A +G + T G IR+
Sbjct: 809 YSGLDILILKCLKAGYEPDMSFVLQEVEEQQKKDFLFYHSAKLAATYGLLKTRPGEPIRV 868
Query: 119 INNL 122
+ N+
Sbjct: 869 VKNI 872
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+ SN +A RW+D +R + ++K PA SW + K +HP +I
Sbjct: 772 YVLYSNVFATIGRWEDVEDVRGQMGAHKIQKKPAHSWVKWKGNISIFGMGDQTHPQMEQI 831
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
N L L + + + GYVP T +L D ++EQK++ + HS R A+ FG I+ P+G T+R+
Sbjct: 832 NGKLLGLMKIVGEAGYVPDTSYSLQDTDEEQKEHNMWSHSERIALAFGLINIPEGSTVRI 891
Query: 119 INNL 122
NL
Sbjct: 892 FKNL 895
>gi|358357196|gb|AEU08438.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRINEALKDLF 66
AAA RW D A++R ++ ++G++K CS E+ S HP I LK L
Sbjct: 1 AAAGRWDDKAKVRKTMEDRGVRKEAGCSSIELNSQLHAFVTEDKLHPQMEEIYAELKRLS 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
+M++ GYVP T+ L DVE++QKK L +HS + AI FG I+T G I ++ NL
Sbjct: 61 GQMQEAGYVPDTRFGLLDVEEDQKKISLCHHSEKLAIAFGLINTAPGTPIHVVKNL 116
>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 66/124 (53%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
+V+LSN YAA RW + ++R + +G K S E +SHP ++
Sbjct: 790 HVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKL 849
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L++L M+ GYVP T LHD+E+E K+ L YHS R AI FG I+T G T+R+
Sbjct: 850 YAKLEELAAPMKHLGYVPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRI 909
Query: 119 INNL 122
NL
Sbjct: 910 TKNL 913
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 65/124 (52%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA A W + AR+R ++R+ + K SW E++ SHP I
Sbjct: 656 YVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDI 715
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L L +++ GYVP T LHD+ DE K+ L HS + A+ FG I+T + IR+
Sbjct: 716 YGKLDTLVRQIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRI 775
Query: 119 INNL 122
NL
Sbjct: 776 FKNL 779
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 70/124 (56%), Gaps = 12/124 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+L+N YA A W AR+R ++ KG++KTP S E++ SHP +I
Sbjct: 684 HVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKI 743
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L R++ GY+P T ++HDVED K+ LL+ HS + AI F ++T G TI L
Sbjct: 744 YAFLETLGNRIKAAGYMPDTN-SVHDVEDVVKEQLLNSHSEKLAIAFSLLNTSPGTTIHL 802
Query: 119 INNL 122
NL
Sbjct: 803 RKNL 806
>gi|449482566|ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Cucumis sativus]
Length = 908
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSW-----------TEIKSHPYRLRI 58
Y++ SN Y+A+ RW + ++R +R KG +K P+ SW +SHP I
Sbjct: 742 YILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWIIHENKIHSFYARDRSHPQGKDI 801
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L + GYVP T L +VE+ QKK L YHSG+ A FG + T G+ I++
Sbjct: 802 YSGLEILILECLKVGYVPDTSFVLQEVEERQKKEFLFYHSGKLAATFGILMTKPGKPIQI 861
Query: 119 INNL 122
+ N+
Sbjct: 862 VKNV 865
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 66/124 (53%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
+V+LSN YAA RW + ++R + +G K S E +SHP ++
Sbjct: 1125 HVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKL 1184
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L++L M+ GYVP T LHD+E+E K+ L YHS R AI FG I+T G T+R+
Sbjct: 1185 YAKLEELAAPMKHLGYVPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRI 1244
Query: 119 INNL 122
NL
Sbjct: 1245 TKNL 1248
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 11/86 (12%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
Y++LSN YA +W + A LR ++ +G+KK S E++ HP +I
Sbjct: 615 YILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKI 674
Query: 59 NEALKDLFERMEQEGYVPTTKEALHD 84
E L+ L +M +E Y+P LHD
Sbjct: 675 YELLRKLEAQMGKEVYIPDLDFLLHD 700
>gi|449451241|ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Cucumis sativus]
Length = 908
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSW-----------TEIKSHPYRLRI 58
Y++ SN Y+A+ RW + ++R +R KG +K P+ SW +SHP I
Sbjct: 742 YILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWIIHENKIHSFYARDRSHPQGKDI 801
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L + GYVP T L +VE+ QKK L YHSG+ A FG + T G+ I++
Sbjct: 802 YSGLEILILECLKVGYVPDTSFVLQEVEERQKKEFLFYHSGKLAATFGILMTKPGKPIQI 861
Query: 119 INNL 122
+ N+
Sbjct: 862 VKNV 865
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRLRINEALKD 64
NN YV+L+N YA +RW +R + + ++K P CS EI + Y ++ +K
Sbjct: 444 NNGENYVLLANLYARDQRWDKVGEVREMMDCRRVRKVPGCSSIEIDNVVYEFVVSNYIKP 503
Query: 65 LFE-----------RMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
FE +++ GYV T A +D+E+E+K++ L YHS + A+ FG + +P G
Sbjct: 504 GFEEVYKLLADMNKKLKLAGYVADTGMASYDIEEEEKEHSLMYHSEKLALAFGLLKSPSG 563
Query: 114 RTIRLINNL 122
T+R++ NL
Sbjct: 564 LTLRIVKNL 572
>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
Length = 981
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 11/120 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA RW D +LR ++ + K PACSW ++K H + +I
Sbjct: 756 YVLLSNLYATNARWVDVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKI 815
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L ++ ++ + GY+ T ALHD ++EQK+ L HS + A+ +G I P+G T ++
Sbjct: 816 YAKLDEMLLKLREVGYIADTSSALHDTDEEQKEQNLWNHSEKLALAYGLIVVPEGSTCQM 875
>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 721
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 75/127 (59%), Gaps = 14/127 (11%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+L+N YA AR+W++ A +R S+R K ++K P CSW E+K SHP +
Sbjct: 552 YVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREV 611
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNL---LHYHSGRFAIVFGAISTPDGRT 115
NE L+++ ++M++ GYV K A+ ++ + + L +HS + A+ FG +ST DG
Sbjct: 612 NEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEE 671
Query: 116 IRLINNL 122
+ ++ NL
Sbjct: 672 LVVVKNL 678
>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
Length = 844
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
+V+LSN YA+A +W+ +R KG++KTP S E+ ++HP +
Sbjct: 575 HVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEM 634
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L L +++ GYVP + L DVED++K+++L HS R AI F I+TP TIR+
Sbjct: 635 YRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRI 694
Query: 119 INNL 122
NL
Sbjct: 695 FKNL 698
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
+V+LSN YA+A +W+ +R KG++KTP S E+ ++HP +
Sbjct: 657 HVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEM 716
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L L +++ GYVP + L DVED++K+++L HS R AI F I+TP TIR+
Sbjct: 717 YRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRI 776
Query: 119 INNL 122
NL
Sbjct: 777 FKNL 780
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 68/128 (53%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPY 54
N YV+LSN YA RW++ LR + +G+KK P CS E+ SHP
Sbjct: 398 NSSAYVLLSNVYAKLGRWREVRHLRDLMEVRGIKKLPGCSLVEVDGVIREFFAGDNSHPE 457
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
L + L ++ +R+E+ GY T E L D+++E K+ L HS + AI + + T G
Sbjct: 458 LLNLYVMLDEIMKRLEKHGYERNTGEVLLDLDEEGKEFALSLHSEKLAIAYCFLRTSPGT 517
Query: 115 TIRLINNL 122
TIR++ NL
Sbjct: 518 TIRIVKNL 525
>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
Y++L+N YA++ W+D ++R ++R+KG++K CSW + + HP R I
Sbjct: 754 YILLANLYASSGLWEDAIKVRKAMRDKGLRKEVGCSWIDTGNRRHVFVAGDVYHPQRKEI 813
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR-TIR 117
E L L + GYVP T+ LHDV++ +K+ +L HS + A+ FG ++ G IR
Sbjct: 814 YEKLAQLNYSCRRMGYVPMTELVLHDVDETEKEAILGCHSEKLAVSFGLLNCGVGNGVIR 873
Query: 118 LINNL 122
++ NL
Sbjct: 874 VMKNL 878
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 11/123 (8%)
Query: 11 VILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRIN 59
V+L N YA+ +W AR+R ++ G+KK PACSW E++ +HP I
Sbjct: 459 VLLYNIYASTGQWDAAARVRRIMKTTGVKKEPACSWVEMENSVHMFVANDDTHPRAEEIY 518
Query: 60 EALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLI 119
+ + +++ +EGYVP L V+D++++ L YHS + A+ F I P G TIR++
Sbjct: 519 KMWGQISKKIRKEGYVPDMDYVLLRVDDQEREANLQYHSEKLALAFALIEMPAGATIRIM 578
Query: 120 NNL 122
N+
Sbjct: 579 KNI 581
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV++SN YAA+ +WK+ +R +++++G+KK A S E +S PY +
Sbjct: 541 YVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREV 600
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
++ L M+ GYVP LHDVE E K++LL+YHS + A+ FG + G I++
Sbjct: 601 YRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQV 660
Query: 119 INNL 122
NL
Sbjct: 661 TKNL 664
>gi|225428400|ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
gi|297744424|emb|CBI37686.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
++ ++ YV+L N YA+A +W D A++R + KG+ K P CS E+
Sbjct: 397 MDSDDCGSYVLLGNVYASAGKWHDKAKMRELMNQKGLSKPPGCSRIEVDGLVHEFAAGDS 456
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
H +I L ++ ER++ EGY P E L ++++++K L +HS + A+ FG I T
Sbjct: 457 GHIEAEKIYAKLDEVEERLKAEGYHPKLSEVLLEIDNKEKAFQLRHHSEKLAVAFGLIKT 516
Query: 111 PDGRTIRLINNL 122
G IR++ NL
Sbjct: 517 SPGTEIRIVKNL 528
>gi|190612775|gb|ACE80765.1| pentatricopeptide repeat protein [Porella platyphylla]
Length = 152
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 61/116 (52%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRINEALKDLF 66
AAA +W +A + +G+KK P +W E+ + HP I L+ L
Sbjct: 1 AAAGKWDSSANFQRQRLERGVKKLPGRTWIEVNNKMHSFVVDDQEHPQLTEIRAELRRLS 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
E M GYVP T+ LHDVE+E+K + L HS + AI FG ISTP G IR+ NL
Sbjct: 61 ELMTAVGYVPDTQYVLHDVEEEEKVSRLSLHSEKLAIAFGLISTPPGTPIRIFKNL 116
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 12/130 (9%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTE------------IKSH 52
+N YV+LS+ A+ +W D A +R ++R + K P CSW E IK+H
Sbjct: 532 DNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNH 591
Query: 53 PYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPD 112
P + I L+ + + GY P LHDV++E+K + L HS R A+ +G + P+
Sbjct: 592 PEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPE 651
Query: 113 GRTIRLINNL 122
G IR++ NL
Sbjct: 652 GVPIRVMKNL 661
>gi|297817744|ref|XP_002876755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322593|gb|EFH53014.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 597
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 66/124 (53%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+LSN YAAA +W ++R +R G KK A S E SHP I
Sbjct: 418 HVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFDGKIHFFNRGDISHPQSKAI 477
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L ++ +++ GYVP T HDVE E+K++ L +HS + AI FG I+ G IR+
Sbjct: 478 YEKLDEILKKIRNMGYVPDTGSVFHDVEMEEKESSLSHHSEKLAIAFGLINGRAGHPIRV 537
Query: 119 INNL 122
+ NL
Sbjct: 538 MKNL 541
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 67/128 (52%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPY 54
N V+LSN YA R+W+D +R+ +R+ +KK P SW ++ SH
Sbjct: 511 NSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHXR 570
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
+ I E L L ++++ GYVP T D++D K+ LLH HS R A+ F IS P G+
Sbjct: 571 KSAIYEKLDXLLDQIKAAGYVPXTDSVPLDMDDXMKEKLLHRHSERIAVAFALISMPIGK 630
Query: 115 TIRLINNL 122
I + NL
Sbjct: 631 PIIVKKNL 638
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 68/129 (52%), Gaps = 20/129 (15%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YAA+ R +R +R KG+ KTP CS E+ SHP RI
Sbjct: 415 YVLLSNIYAASGRHASAREIRHLMREKGVDKTPGCSTVEVNGVIHQFIVGDLSHP---RI 471
Query: 59 NEALKDLFE-----RMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+ L +E R+E EGY+P KE L D+E+E+K+ L HS + AI F IS D
Sbjct: 472 KDILSKWYEIDTRIRLE-EGYIPDMKEVLLDIEEEEKEGALSRHSEKLAIAFALISISDN 530
Query: 114 RTIRLINNL 122
IR+ NL
Sbjct: 531 MPIRIFKNL 539
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 67/128 (52%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPY 54
N YV+LSN YA ++ W + +R ++ KG++K P CS E+ KSHP
Sbjct: 445 NHGAYVLLSNIYADSKDWDRVSNVRQTMNVKGVRKQPGCSVIEVGGEVHEFFVGDKSHPR 504
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
I L ++ R++ GYV T D+E+E+K++ L HS + AI FG IS
Sbjct: 505 YAEIQVMLGEISRRLKLSGYVANTNPVFFDIEEEEKEDALCMHSEKIAIAFGLISLSPDV 564
Query: 115 TIRLINNL 122
IR++ NL
Sbjct: 565 PIRIVKNL 572
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV++SN YAA+ +WK+ +R +++++G+KK A S E +S PY +
Sbjct: 510 YVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREV 569
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
++ L M+ GYVP LHDVE E K++LL+YHS + A+ FG + G I++
Sbjct: 570 YRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQV 629
Query: 119 INNL 122
NL
Sbjct: 630 TKNL 633
>gi|190612769|gb|ACE80762.1| pentatricopeptide repeat protein [Pellia epiphylla]
Length = 152
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRINEALKDLF 66
AAA W A++ + +G+KK P CSW E+ HP +I L L
Sbjct: 1 AAAGNWDGAAKIEQLRKRRGVKKQPGCSWIEVNKEVHSFVVDDDQHPLIGQIRAKLALLL 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
M++ GYVP T LHDV++E+K+ L HS + AI FG +STP G +R++ NL
Sbjct: 61 GCMKEAGYVPDTSFVLHDVDEEKKEFHLCGHSEKLAIAFGLMSTPSGTPLRILKNL 116
>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
[Vitis vinifera]
gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 65/130 (50%), Gaps = 12/130 (9%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS--HPY-------- 54
NN YV+LSN YA A W+ +R + +GM K CSW +IKS H +
Sbjct: 480 NNAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQIKSKIHTFVAGGSNEF 539
Query: 55 --RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPD 112
+ + K L E ME+ GYVP T LHDV +E + + HS R A +F I+T
Sbjct: 540 RNSVEYKKVWKRLMEAMEEVGYVPDTGVVLHDVSEEMRAMWVCGHSERLATMFALINTAS 599
Query: 113 GRTIRLINNL 122
G IR+ NL
Sbjct: 600 GMPIRITKNL 609
>gi|147800371|emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]
Length = 773
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 65/130 (50%), Gaps = 12/130 (9%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS--HPY-------- 54
NN YV+LSN YA A W+ +R + +GM K CSW +IKS H +
Sbjct: 479 NNAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQIKSKIHTFVAGGSNEF 538
Query: 55 --RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPD 112
+ + K L E ME+ GYVP T LHDV +E + + HS R A +F I+T
Sbjct: 539 RNSVEYKKVWKRLMEAMEEVGYVPDTGVVLHDVSEEMRAMWVCGHSERLATMFALINTAS 598
Query: 113 GRTIRLINNL 122
G IR+ NL
Sbjct: 599 GMPIRITKNL 608
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 69/130 (53%), Gaps = 12/130 (9%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRL-------- 56
+N +V+LSN YA A +WKD + +R ++ MKKTP S EI Y
Sbjct: 468 DNSGDHVLLSNVYAVAGKWKDVSSIRRTMTEHSMKKTPGWSMIEIDKVIYGFVAGEKPNE 527
Query: 57 ---RINEALKDLFERMEQE-GYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPD 112
+E L+++ R+ E GY P + LHD+E+E+K++ + HS + A FG P
Sbjct: 528 VTEEAHEKLREIMLRLRTEAGYAPQLRSVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPK 587
Query: 113 GRTIRLINNL 122
GR +R++ NL
Sbjct: 588 GRILRIVKNL 597
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRLRIN-------EAL 62
YV++SN +A + +W D R+R +++ G++K CSW E+ + I E +
Sbjct: 715 YVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEV 774
Query: 63 KDLFERMEQE----GYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
++ + R+E + GY P T LHD+E+E K +L HS + AI FG ++T G +R+
Sbjct: 775 RETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRV 834
Query: 119 INNL 122
NL
Sbjct: 835 YKNL 838
>gi|218185168|gb|EEC67595.1| hypothetical protein OsI_34962 [Oryza sativa Indica Group]
Length = 838
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
+V++SN YA RW D + R +++ G+ K+P S+ +I K+HP I
Sbjct: 672 HVLISNFYATTNRWDDAKKARKEMKSMGIDKSPGSSFVDINGVLHEFLVGDKTHPASKEI 731
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
++D+ R+ + G+ +T AL DVE+E K + L YHS R AI F I++ G IR+
Sbjct: 732 YAMVEDIETRLSECGHRSSTSSALFDVEEEDKADALSYHSERLAIAFALIASNPGAPIRI 791
Query: 119 INNL 122
I NL
Sbjct: 792 IKNL 795
>gi|212722964|ref|NP_001132833.1| uncharacterized protein LOC100194323 [Zea mays]
gi|194695520|gb|ACF81844.1| unknown [Zea mays]
Length = 230
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA A RW D +R + NKG+KK P S E+ + HP I
Sbjct: 64 YVLLSNMYARAGRWADVTSVRSVMVNKGIKKFPGTSIVELGDQVHTFHIGDRCHPQSEMI 123
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L +L ++ GY P + LHDVE+E K++ L HS + AI F ++T G IR+
Sbjct: 124 YHKLDELLGKIRGMGYNPEVEATLHDVEEEDKEDHLSVHSEKLAIAFLLLNTSPGTIIRV 183
Query: 119 INNL 122
NL
Sbjct: 184 TMNL 187
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 71/129 (55%), Gaps = 20/129 (15%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+L N Y+A+ R +R +R KG++KTP CS EIK SHP RI
Sbjct: 431 YVLLGNIYSASGRHASAREIRNLMREKGVEKTPGCSNVEIKGVIHQFIVGDLSHP---RI 487
Query: 59 NEALKDLFE-----RMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+ L +E R+E EGYVP KE L D+E+E+ ++ L HS + AI F IST D
Sbjct: 488 KDILTKWYEIDSRIRLE-EGYVPDKKEVLLDIEEEEMESALSRHSEKLAIAFALISTEDY 546
Query: 114 RTIRLINNL 122
IR++ NL
Sbjct: 547 MPIRIVKNL 555
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 12/132 (9%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK----------- 50
+N ++ +V+L+N Y AA W+ ++RVS+ +G++KTP CS EIK
Sbjct: 636 LNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGST 695
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
+HP +I L+ L +++ GYVP T L VE++ K+ LL HS + AI FG ++T
Sbjct: 696 AHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNT 754
Query: 111 PDGRTIRLINNL 122
G TI + NL
Sbjct: 755 TAGTTIHVRKNL 766
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 69/128 (53%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPY 54
N YV+LSN YA + W+ + LR +++ KG+KK P CS E+ KSHP
Sbjct: 446 NDGAYVLLSNIYADYKNWESVSSLRQTMKAKGVKKLPGCSVIEVDGEVHEFIVGDKSHPR 505
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
I L+++ + + GYV T L D+E+E+K++ L HS + AI FG IS
Sbjct: 506 YDEIEMKLEEISKCLRLSGYVANTNPVLFDIEEEEKEDALSKHSEKVAIAFGLISLKGVV 565
Query: 115 TIRLINNL 122
IR++ NL
Sbjct: 566 PIRVVMNL 573
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 69/128 (53%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPY 54
N YV+LSN YA A +W + +R +R +G++K P SW E+ SHP
Sbjct: 533 NAATYVLLSNIYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPE 592
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
INE+ + E+++ EGY+P T+ L + + K+ + HS + AIV+G + TP G
Sbjct: 593 CKEINESKDKVIEKIKAEGYIPDTRLVLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGN 652
Query: 115 TIRLINNL 122
IR+ NL
Sbjct: 653 PIRVFKNL 660
>gi|356565103|ref|XP_003550784.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g47530-like [Glycine max]
Length = 515
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
+V+L N Y++A W+ A +R ++NK ++ TP CS E+K SH I
Sbjct: 349 HVLLLNIYSSAGHWEKVAEVRKLMKNKSIQTTPGCSTIELKGVVHEFVVDDVSHTRNHEI 408
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L ++ ++ GYV LH ++D++K +L +HS + AI FG ++TP G T+R+
Sbjct: 409 YETLDEINHQLRIAGYVVELSSELHKMDDKEKGYVLSHHSEKLAIAFGVLATPPGTTLRV 468
Query: 119 INNL 122
NNL
Sbjct: 469 ANNL 472
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA A W + AR+R ++R+ + K SW E++ SHP I
Sbjct: 656 YVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDI 715
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L L ++ GYVP T LHD+ DE K+ L HS + A+ FG I+T + IR+
Sbjct: 716 YGKLDTLVGEIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRI 775
Query: 119 INNL 122
NL
Sbjct: 776 FKNL 779
>gi|190612767|gb|ACE80761.1| pentatricopeptide repeat protein [Pellia epiphylla]
Length = 152
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRINEALKDLF 66
AAA +W + ++ + +KK P C+W E+K+ HP + I LK LF
Sbjct: 1 AAAGKWDRSVTVQEQRLERQVKKEPGCTWIEVKNEVHSFTVDGRKHPQIVEIRAELKKLF 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
++M + GYVP T+ L DV +E+K+ L++HS + AI FG ++TP G +R+ +L
Sbjct: 61 KKMREVGYVPDTRFVLRDVTEEEKETQLYHHSEKLAIAFGLMNTPPGTPLRIFKSL 116
>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 1000
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 11/117 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA RW D +LR ++ + K PACSW ++K H + +I
Sbjct: 756 YVLLSNLYATNARWADVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKI 815
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRT 115
L ++ ++ + GY+ T ALHD ++EQK+ L HS + A+ +G I P+G T
Sbjct: 816 YAKLDEMLLKLREVGYIADTSSALHDTDEEQKEQNLWNHSEKLALAYGLIVVPEGST 872
>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 70/123 (56%), Gaps = 11/123 (8%)
Query: 11 VILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRIN 59
V+L N YA+ +W AR+R ++ G+KK PACSW EI+ +HP I
Sbjct: 348 VLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIY 407
Query: 60 EALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLI 119
+ +++ ++ + GYVP T L V++++++ L YHS + A+ F I+ P G TIR++
Sbjct: 408 KKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIM 467
Query: 120 NNL 122
N+
Sbjct: 468 KNI 470
>gi|15233050|ref|NP_191676.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|6850884|emb|CAB71047.1| putative protein [Arabidopsis thaliana]
gi|332646643|gb|AEE80164.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 783
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HP 53
NN YV LSN Y+AA R + A +R ++++ + K P CSW E K HP
Sbjct: 596 NNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHP 655
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+ I + ++ +++ GY ALHD++ E K+ L YHS + A+ FG + P G
Sbjct: 656 RMVEIYSKVDEMMLLIKEAGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSG 715
Query: 114 RTIRLINNL 122
IR+I NL
Sbjct: 716 APIRIIKNL 724
>gi|224118652|ref|XP_002331415.1| predicted protein [Populus trichocarpa]
gi|222873629|gb|EEF10760.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 11/123 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+++N Y + +WK+ A R + ++G+ K P S EI +SH + I
Sbjct: 292 YVLMANLYTSMGKWKEAAVTRSLMIDRGLVKAPGWSQVEINGSVHVFIAGDRSHTQSIDI 351
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+++ ++ + GYVP T +HD+E E+K+ L HS R AI FG IST G T+R+
Sbjct: 352 YKKLEEINLKLAEAGYVPETDTVIHDLEREEKEEALKVHSERLAIAFGLISTEAGSTLRI 411
Query: 119 INN 121
+ N
Sbjct: 412 MKN 414
>gi|242047556|ref|XP_002461524.1| hypothetical protein SORBIDRAFT_02g004050 [Sorghum bicolor]
gi|241924901|gb|EER98045.1| hypothetical protein SORBIDRAFT_02g004050 [Sorghum bicolor]
Length = 867
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWT-----------EIKSHPYRLRI 58
YV+ SN + + RW + R+ +R KGM+K PA SWT ++HP I
Sbjct: 703 YVLTSNLLSESARWHSSENRRLEMREKGMRKIPARSWTFHGNMVHSFFARDRTHPQSRDI 762
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L L + GY P T LHDVE+ QK++ L YHS + A ++G + G+T+R+
Sbjct: 763 YAGLDVLILECIKAGYEPDTTFVLHDVEEYQKRHFLMYHSVKLASMYGLLMAGPGQTVRV 822
Query: 119 INNL 122
+ N+
Sbjct: 823 VKNI 826
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRLRIN-------EAL 62
YV++SN +A + +W D R+R +++ G++K CSW E+ + I E +
Sbjct: 617 YVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEV 676
Query: 63 KDLFERMEQE----GYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
++ + R+E + GY P T LHD+E+E K +L HS + AI FG ++T G +R+
Sbjct: 677 RETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRV 736
Query: 119 INNL 122
NL
Sbjct: 737 YKNL 740
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 67/113 (59%), Gaps = 7/113 (6%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRLRINEALKDLFERM 69
YV+++N Y+AA RW+D A++R ++ +G+ K P CSW E+K + + + L E++
Sbjct: 806 YVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQI 865
Query: 70 EQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
+ K+ DV++++K+ L HS + A+ FG IST G +R+I NL
Sbjct: 866 -------SGKDGKLDVDEDEKEFSLCGHSEKIALAFGLISTTXGTPLRIIKNL 911
>gi|359479564|ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 616
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI--KSHPYRL----------R 57
YV+LSN YA A RW D A++R+ +R +G+KK CS + K H + L +
Sbjct: 449 YVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSMLVNGKVHEFLLGKELDSSYSGQ 508
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
+ + ++ R++ +GY P + L D+EDE K++LL+ HS + AI FG I I
Sbjct: 509 VLAKIAEVVSRLKLQGYEPDLTQVLLDIEDEGKESLLNLHSEKMAIAFGLIHINKSAPIH 568
Query: 118 LINNL 122
++ NL
Sbjct: 569 IVKNL 573
>gi|5050911|emb|CAB45019.1| PCMP-H2 [Arabidopsis thaliana]
Length = 287
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HP 53
NN YV LSN Y+AA R + A +R ++++ + K P CSW E K HP
Sbjct: 116 NNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHP 175
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+ I + ++ +++ GY ALHD++ E K+ L YHS + A+ FG + P G
Sbjct: 176 RMVEIYSKVDEMMLLIKEAGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSG 235
Query: 114 RTIRLINNL 122
IR+I NL
Sbjct: 236 APIRIIKNL 244
>gi|79456853|ref|NP_191848.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75116883|sp|Q683I9.1|PP295_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62890
gi|51968398|dbj|BAD42891.1| putative protein [Arabidopsis thaliana]
gi|332646886|gb|AEE80407.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 573
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 68/128 (53%), Gaps = 11/128 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS--HPYRL------- 56
N YV+LSN YA RW + +R + KG+ K P CS+ E++ H + +
Sbjct: 403 NSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQE 462
Query: 57 --RINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
RI L ++ +R+ + GYV TKE L D+ ++ K+ L YHS + AI F + T G
Sbjct: 463 SERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGT 522
Query: 115 TIRLINNL 122
+R+I NL
Sbjct: 523 PVRIIKNL 530
>gi|190612787|gb|ACE80771.1| pentatricopeptide repeat protein [Ptilidium pulcherrimum]
Length = 152
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 62/116 (53%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRINEALKDLF 66
AAA +W +A ++ + +G+KK C+W E+ + HP I+ L L
Sbjct: 1 AAAGKWGSSADVQQQRKERGVKKEVGCTWIEVNHELHSFTVDDQQHPQINSIHAELVRLS 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
E M + GY P T LHDVED++K + L YHS + AI FG IST G IR+ NL
Sbjct: 61 EEMNKVGYKPDTSFVLHDVEDQEKVSQLCYHSEKLAIAFGLISTAPGTPIRIFKNL 116
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 70/123 (56%), Gaps = 11/123 (8%)
Query: 11 VILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRIN 59
V+L N YA+ +W AR+R ++ G+KK PACSW EI+ +HP I
Sbjct: 472 VLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIY 531
Query: 60 EALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLI 119
+ +++ ++ + GYVP T L V++++++ L YHS + A+ F I+ P G TIR++
Sbjct: 532 KKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIM 591
Query: 120 NNL 122
N+
Sbjct: 592 KNI 594
>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
Length = 665
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA A RW D +R + NKG+KK P S E+ + HP I
Sbjct: 499 YVLLSNMYARAGRWADVTSVRSVMVNKGIKKFPGTSIVELGDQVHTFHIGDRCHPQSEMI 558
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L +L ++ GY P + LHDVE+E K++ L HS + AI F ++T G IR+
Sbjct: 559 YHKLDELLGKIRGMGYNPEVEATLHDVEEEDKEDHLSVHSEKLAIAFLLLNTSPGTIIRV 618
Query: 119 INNL 122
NL
Sbjct: 619 TMNL 622
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 70/123 (56%), Gaps = 11/123 (8%)
Query: 11 VILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRIN 59
V+L N YA+ +W AR+R ++ G+KK PACSW EI+ +HP I
Sbjct: 472 VLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIY 531
Query: 60 EALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLI 119
+ +++ ++ + GYVP T L V++++++ L YHS + A+ F I+ P G TIR++
Sbjct: 532 KKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIM 591
Query: 120 NNL 122
N+
Sbjct: 592 KNI 594
>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
Length = 1017
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 62/108 (57%), Gaps = 12/108 (11%)
Query: 11 VILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRIN 59
V++SN +A RW D ++R ++ GM+K P CSW E+ KSHP I
Sbjct: 757 VLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIY 816
Query: 60 EALKDLFERMEQE-GYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFG 106
E L ++ ++E+E GYV TK LH+V++ +K +LH HS R AI +G
Sbjct: 817 EKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYG 864
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 72/133 (54%), Gaps = 12/133 (9%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKK-TPACSWTEIKS--------- 51
I N YV+LSN YA A +W + ++R + +KGMKK P CS EI S
Sbjct: 511 IEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVVHEFIIGD 570
Query: 52 --HPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIS 109
HP I L+++ +E+ G+VP T E L ++E+E K+ L +HS + AI FG IS
Sbjct: 571 KLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIS 630
Query: 110 TPDGRTIRLINNL 122
T G + ++ NL
Sbjct: 631 TKPGTKLTIVKNL 643
>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
Length = 1215
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 11/117 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+LSN YA RW D +LR ++ + K PACSW ++K H + +I
Sbjct: 1058 YVLLSNLYATNARWADVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKI 1117
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRT 115
L ++ ++ + GY+ T ALHD ++EQK+ L HS + A+ +G I P+G T
Sbjct: 1118 YAKLDEMLLKLREVGYIADTSSALHDTDEEQKEQNLWNHSEKLALAYGLIVVPEGST 1174
>gi|296084925|emb|CBI28334.3| unnamed protein product [Vitis vinifera]
Length = 604
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI--KSHPYRL----------R 57
YV+LSN YA A RW D A++R+ +R +G+KK CS + K H + L +
Sbjct: 437 YVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSMLVNGKVHEFLLGKELDSSYSGQ 496
Query: 58 INEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
+ + ++ R++ +GY P + L D+EDE K++LL+ HS + AI FG I I
Sbjct: 497 VLAKIAEVVSRLKLQGYEPDLTQVLLDIEDEGKESLLNLHSEKMAIAFGLIHINKSAPIH 556
Query: 118 LINNL 122
++ NL
Sbjct: 557 IVKNL 561
>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
Length = 838
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 67/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+LSN YA + +W R R ++++G+KK P SW E+K+ HP +I
Sbjct: 672 YVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQI 731
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E + DL ER + GYV L+DVE EQK + HS + A+ FG +S + IR+
Sbjct: 732 YEYIDDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRV 791
Query: 119 INNL 122
I NL
Sbjct: 792 IKNL 795
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 11/127 (8%)
Query: 6 NMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPY 54
N YV+L+N YA A RW+ +L+ + +G+++ CSW E K HP
Sbjct: 700 NTGYYVLLANIYAEAERWEAVRKLKNKIGGRGLRENTGCSWIEAKGKVHVFIADNRNHPQ 759
Query: 55 RLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGR 114
RI E L ++ +RM++EG+ P K AL ++ L HS + A+ FG ++ +GR
Sbjct: 760 GTRIAEFLNEVAKRMQEEGHDPKKKYALMGADNAVHGEALCGHSSKLAVAFGVLNLSEGR 819
Query: 115 TIRLINN 121
IR+ N
Sbjct: 820 LIRVTKN 826
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 51/128 (39%), Positives = 71/128 (55%), Gaps = 15/128 (11%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV++SN YA A WK+ R+R V++K +KK SW EI +HP +I
Sbjct: 483 YVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLTEKI 542
Query: 59 NEALKDLFERMEQE-GYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAI--STPDGR- 114
+E LK++ RM++E GYV K ALHDVE+E K + L HS + AI + +GR
Sbjct: 543 HEILKEMERRMKEELGYVYGVKYALHDVEEESKMDNLRVHSEKLAIGLALVCGGLEEGRK 602
Query: 115 TIRLINNL 122
IR+ NL
Sbjct: 603 VIRVFKNL 610
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
+N++ YV+LSN YA A +W+ +R+R + + +K+ P S ++
Sbjct: 435 LNMHEPSTYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKRKPGYSSIDLGKESQVFHAGET 494
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
HP + I LK+L M + GY+P T LHD+E+++K+ L +HS R+A+ +G +
Sbjct: 495 CHPMKDEIFGLLKELDAEMRKRGYIPDTSYVLHDMEEQEKERELFWHSERWAVAYGLLKA 554
Query: 111 PDGRTIRLINNL 122
G IR++ NL
Sbjct: 555 VPGTVIRIVKNL 566
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 67/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+LSN YA + +W R R ++++G+KK P SW E+K+ HP +I
Sbjct: 823 YVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQI 882
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E + DL ER + GYV L+DVE EQK + HS + A+ FG +S + IR+
Sbjct: 883 YEYIDDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRV 942
Query: 119 INNL 122
I NL
Sbjct: 943 IKNL 946
>gi|296089328|emb|CBI39100.3| unnamed protein product [Vitis vinifera]
Length = 483
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA A+ W+ +R ++ KG+KK P S E+ SHP +I
Sbjct: 317 YVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIELDGRVHKFTIGDSSHPEMDKI 376
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+++ R+ GY T +AL D+++E+K++ LH HS + AI FG + + G IR+
Sbjct: 377 ERMWEEILMRIRAAGYRGNTADALFDIDEEEKESALHRHSEKLAIAFGMMRSEAGTPIRI 436
Query: 119 INNL 122
+ NL
Sbjct: 437 VKNL 440
>gi|358357236|gb|AEU08458.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRINEALKDLF 66
A RW DTA++R ++ +G++K P S E+ +SHP I+ L L
Sbjct: 1 AVVGRWDDTAKVRKLMQVRGIRKVPGRSCIEMDNVVHSYVVDHESHPQIKEIHVELNRLS 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
+M++ G +P T+ LHDVE+E KK L YHS + AI FG I TP G +R+I NL
Sbjct: 61 GQMKEAGSMPDTRFVLHDVEEEMKKFSLCYHSEKLAIAFGLIKTPPGTPLRIIKNL 116
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN Y+ R + A +R V+ + + K+P C+ E+ +SH + I
Sbjct: 617 YVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDI 676
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
L+ L +M + GY T ALHDVE+E+K+ ++ HS + AI FG I+T G IR+
Sbjct: 677 YAKLEKLTGKMREMGYQAETVPALHDVEEEEKELAVNVHSEKLAIAFGLITTEPGNEIRI 736
Query: 119 INNL 122
I NL
Sbjct: 737 IKNL 740
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 12/125 (9%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRL-----------RI 58
YVILSN YA ++W+ LR ++++ K P CS E+ + + ++
Sbjct: 438 YVILSNLYARNKKWEAVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKL 497
Query: 59 NEALKDLFERMEQEGYVPTTKEALH-DVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIR 117
+ AL ++ + ++ GYVP T +H D+ D++K+ L YHS + AI FG ++TP G TIR
Sbjct: 498 HRALDEMVKELKLAGYVPDTSMVVHADMGDQEKEITLRYHSEKLAIAFGLLNTPPGTTIR 557
Query: 118 LINNL 122
++ NL
Sbjct: 558 VVKNL 562
>gi|190612943|gb|ACE80849.1| pentatricopeptide repeat protein [Lepidogyna hodgsoniae]
Length = 152
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 63/116 (54%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRINEALKDLF 66
AAA +W + ++ +G KK P C+W E+ +HP +RI E L +
Sbjct: 1 AAAGKWSSSDSVQQLRLRRGAKKQPGCTWIEVNKQVHSFTVGDLNHPQIVRILEELDRVS 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
M++ GYVP T LHD+++E K+ L +HS + AI FG ISTP G +R+ NL
Sbjct: 61 GLMKEAGYVPDTSFVLHDIDEENKEVRLCHHSEKLAIAFGLISTPPGTPLRIFKNL 116
>gi|190612869|gb|ACE80812.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRINEALKDLF 66
AAA +W R++ + +G+ K P C+W E+ ++HP+ I+ L+ L
Sbjct: 1 AAAGQWDSRDRVQELRKERGVMKLPGCTWIEVGTQVHSFVVDDQAHPHINEIHAELQRLS 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
E+M++ GYVP T+ LHDVE+E+K L +HS + AI FG +ST G +R+ NL
Sbjct: 61 EQMKEAGYVPDTQFVLHDVEEEEKIFRLCHHSEKLAIAFGFLSTVAGTPLRIYKNL 116
>gi|358357154|gb|AEU08417.1| pentatricopeptide repeat protein [Atrichum undulatum]
Length = 152
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRINEALKDLF 66
AAA +W++ + +R ++ +G+ K P SW E+ SHP I L L
Sbjct: 1 AAAGKWEEVSMVRSMMQERGIHKEPGRSWIEVDGKIHGFVVGDTSHPEAKEIYAELNRLT 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
ER++ EGY+P T+ L ++++E K+ +L HS R AI +G I PDG+ IR+ NL
Sbjct: 61 ERIKDEGYIPDTRVVLENIDEEDKERVLCSHSERLAIAYGLICIPDGKPIRVYKNL 116
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+LS+ YA++ +WK+ A++R ++ GM+K P CS E+ + HP + RI
Sbjct: 484 YVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERI 543
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L++L + EGY P + L D+ED +K+ L HS R AI +G IST IR+
Sbjct: 544 YEKLEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAMHSERLAICYGLISTEPCTMIRV 603
Query: 119 INNL 122
+ NL
Sbjct: 604 MKNL 607
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRL-------- 56
N YV+LSN YA +W + ++R ++ G+ K CSW EI YR
Sbjct: 804 NKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLS 863
Query: 57 ---RINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
+I + L +++ + GY P T LH++E+E K +L HS + AI FG ++T G
Sbjct: 864 ESKKIQQTWIKLEKKISKIGYKPDTSCVLHELEEEGKIKILKSHSEKLAISFGLLNTAKG 923
Query: 114 RTIRLINNL 122
T+R+ NL
Sbjct: 924 TTLRVCKNL 932
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHP 53
+N YV+LSN YA + W + + +R S+++KG++K P CS E+ KSHP
Sbjct: 449 SNHGAYVLLSNIYADSDDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHP 508
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
I+ KD+ R+ GY T + D+++E+K++ L HS + AI FG +S
Sbjct: 509 KYNEIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKAD 568
Query: 114 RTIRLINNL 122
IR++ NL
Sbjct: 569 VPIRIVKNL 577
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 70/127 (55%), Gaps = 12/127 (9%)
Query: 8 RVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRL 56
R Y++LSN Y+A+ WKD +R+R ++ KG+ + S+ E SHP
Sbjct: 942 RNYIMLSNIYSASGLWKDASRIRNLMKQKGLVRASGYSYIEHGNKIHKFVVGDWSHPESE 1001
Query: 57 RINEALKDLFERMEQE-GYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRT 115
+I + LK++ ++M+ E G+ T+ LHDV+++ K+ +++ HS + A+ FG +
Sbjct: 1002 KIQKKLKEIRKKMKSELGFKSRTEFVLHDVDEDVKEEMINQHSEKIAMAFGLLVISPMEP 1061
Query: 116 IRLINNL 122
I + NL
Sbjct: 1062 IIIRKNL 1068
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRI 58
YV+LSN YA A+ W+ +R ++ KG+KK P S E+ SHP +I
Sbjct: 457 YVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIELDGRVHKFTIGDSSHPEMDKI 516
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+++ R+ GY T +AL D+++E+K++ LH HS + AI FG + + G IR+
Sbjct: 517 ERMWEEILMRIRAAGYRGNTADALFDIDEEEKESALHRHSEKLAIAFGMMRSEAGTPIRI 576
Query: 119 INNL 122
+ NL
Sbjct: 577 VKNL 580
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 11/123 (8%)
Query: 11 VILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRIN 59
V+LSN YA+ W D +R +R G+ KTP CS E K+HP I
Sbjct: 628 VLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIE 687
Query: 60 EALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLI 119
L ++ ++++ EGY P T+E D+++E+K+ L HS + AI FG I+ IR++
Sbjct: 688 HMLDEMAKKLKLEGYAPDTREVSLDIDEEEKETTLFRHSEKLAIAFGLIAIDPPTPIRIV 747
Query: 120 NNL 122
NL
Sbjct: 748 KNL 750
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+LS+ YA++ +WK+ A++R ++ GM+K P CS E+ + HP + RI
Sbjct: 448 YVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERI 507
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L++L + EGY P + L D+ED +K+ L HS R AI +G IST IR+
Sbjct: 508 YEKLEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAMHSERLAICYGLISTEPCTMIRV 567
Query: 119 INNL 122
+ NL
Sbjct: 568 MKNL 571
>gi|358357164|gb|AEU08422.1| pentatricopeptide repeat protein [Physcomitrium pyriforme]
Length = 152
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRINEALKDLF 66
A+ RW + LR ++ +G++K P SW E+ SHP I + L+
Sbjct: 1 ASDGRWDQVSLLRTLMQERGIRKEPGRSWIEVAGTIHHFVVGDTSHPEAKEIYAEQEKLW 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
ERM+ +GY P T+ LHD+++E K+ L YHS + AI +G + TP G IR+ NL
Sbjct: 61 ERMKAQGYSPDTRLVLHDIDEEDKEMALCYHSEKLAITYGLMRTPPGEAIRIFKNL 116
>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 802
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 67/123 (54%), Gaps = 11/123 (8%)
Query: 11 VILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRIN 59
V+L N YA+ W AR+R ++ G+KK PACSW EI+ +HP I
Sbjct: 459 VLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRAEEIY 518
Query: 60 EALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLI 119
+ ++ ++ +EGYVP L V++++++ L YHS + A+ F I P G TIR++
Sbjct: 519 KMWDEISMKIRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIM 578
Query: 120 NNL 122
N+
Sbjct: 579 KNI 581
>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
Length = 710
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 69/129 (53%), Gaps = 11/129 (8%)
Query: 5 NNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HP 53
N+ VYV+LSN +A +R W+ A +R + +G+KK P SW I++ HP
Sbjct: 539 NDSGVYVLLSNIHAKSREWEGVAEVRSLMNKRGVKKEPGVSWIGIRNQTHVFLAEENQHP 598
Query: 54 YRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDG 113
I +K++ ++ GY P HDV++EQ+++ L YHS + A+ +G + TP+
Sbjct: 599 EITLIYAKIKEVLSKIRPLGYSPDVAGVFHDVDEEQREDNLSYHSEKLAVAYGLMKTPEN 658
Query: 114 RTIRLINNL 122
+ + N+
Sbjct: 659 SPLYVTKNV 667
>gi|358357200|gb|AEU08440.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 151
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 18 AAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------KSHPYRLRINEALKDLF 66
AAA RW DTA++R ++ +G+ K P S E+ K HP I+ LK L
Sbjct: 1 AAAGRWLDTAKVRKMMQVRGVSKEPGHSCIEVDNRVHTFVVGDKLHPQMEEIHAELKRLS 60
Query: 67 ERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRLINNL 122
M+ GYVP T+ LHD+E+++++ L +HS + A+ FG ISTP G I +I NL
Sbjct: 61 TMMQVAGYVPDTRFVLHDLEEDEREFSLCHHSEKLALAFGLISTPPGTPICVIKNL 116
>gi|449433225|ref|XP_004134398.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
gi|449487598|ref|XP_004157706.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 583
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 74/134 (55%), Gaps = 13/134 (9%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRL----- 56
+N ++ YVI+SNA + A RW++ A +R ++ + +KK SW E++ +
Sbjct: 407 LNQHDDSAYVIVSNALSVAARWEEVALVRKLMKERHVKKISGKSWIEVRGEAHVFLAGDR 466
Query: 57 ------RINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIS- 109
+N LK+L +E+ GYVP E LH V ++++K L YHS + A+ +G ++
Sbjct: 467 NHERAEEMNAKLKELVGEIEKLGYVPVCSETLHKVGEKERKEALLYHSEKLALAYGILTG 526
Query: 110 -TPDGRTIRLINNL 122
P G+ +R+I NL
Sbjct: 527 VAPPGKALRIIKNL 540
>gi|414880744|tpg|DAA57875.1| TPA: hypothetical protein ZEAMMB73_657034, partial [Zea mays]
Length = 1822
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 11/132 (8%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEI-----------K 50
I N +V LSN YA ++ WK +R+R ++ KG+KK P S E+ +
Sbjct: 1648 IESENDAAHVQLSNIYAESQNWKGVSRVRGMMKAKGVKKVPGWSTIEVDGKVHEFYVGGR 1707
Query: 51 SHPYRLRINEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIST 110
HP I L ++ R+ +GY T+E L D+E+E+K+ + HS + A+ FG I
Sbjct: 1708 LHPRYNEIELMLAEMDRRLRLQGYTANTREVLFDIEEEEKEGAISLHSEKLALAFGLIVL 1767
Query: 111 PDGRTIRLINNL 122
P+ IR++ NL
Sbjct: 1768 PEDVEIRIVKNL 1779
>gi|297733980|emb|CBI15227.3| unnamed protein product [Vitis vinifera]
Length = 491
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 70/133 (52%), Gaps = 12/133 (9%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRLRINEA 61
++ NN +V+LSN YA A +WKD A +R S+ ++ M KTP S E+ Y E
Sbjct: 304 LDPNNSGDHVLLSNIYAVAGKWKDVAAVRRSMTDQRMNKTPGWSMIEVDKIMYSFVAGEV 363
Query: 62 -----------LKDLFERMEQEG-YVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIS 109
LK++ ++ EG Y+P LHD+EDE+K++ + HS + A+ FG
Sbjct: 364 QNSITEEAYEKLKEIMLKLRVEGCYIPEVGSVLHDIEDEEKEDSVSRHSEKLAVAFGIAR 423
Query: 110 TPDGRTIRLINNL 122
G IR++ NL
Sbjct: 424 LCKGSIIRIVKNL 436
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKS-----------HPYRLRI 58
YV+LS+ YA++ +WK+ A++R ++ GM+K P CS E+ + HP + RI
Sbjct: 484 YVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPRKERI 543
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
E L++L + EGY P + L D+ED +K+ L HS R AI +G IST IR+
Sbjct: 544 YEKLEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAIHSERLAICYGLISTEPCTVIRV 603
Query: 119 INNL 122
+ NL
Sbjct: 604 MKNL 607
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV LSN YA+ W+ A++R+ ++ ++K P CSW E+ SHP +I
Sbjct: 465 YVALSNIYASLGNWEGVAKVRLMMKEMDVRKDPGCSWIELDGVIHEFLVEDDSHPKSKKI 524
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+++ + GY P T + L ++++E K++ L+YHS + AI FG IST +R+
Sbjct: 525 HSMLQEMSRNLILVGYRPNTTQVLTNMDEEDKESSLNYHSEKIAIAFGLISTQPQTPLRI 584
Query: 119 INNL 122
NL
Sbjct: 585 TKNL 588
>gi|296085509|emb|CBI29241.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV LSN YA+ W+ A++R+ ++ ++K P CSW E+ SHP +I
Sbjct: 348 YVALSNIYASLGNWEGVAKVRLMMKEMDVRKDPGCSWIELDGVIHEFLVEDDSHPKSKKI 407
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAISTPDGRTIRL 118
+ L+++ + GY P T + L ++++E K++ L+YHS + AI FG IST +R+
Sbjct: 408 HSMLQEMSRNLILVGYRPNTTQVLTNMDEEDKESSLNYHSEKIAIAFGLISTQPQTPLRI 467
Query: 119 INNL 122
NL
Sbjct: 468 TKNL 471
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 70/133 (52%), Gaps = 12/133 (9%)
Query: 2 INLNNMRVYVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIKSHPYRLRINEA 61
++ NN +V+LSN YA A +WKD A +R S+ ++ M KTP S E+ Y E
Sbjct: 468 LDPNNSGDHVLLSNIYAVAGKWKDVAAVRRSMTDQRMNKTPGWSMIEVDKIMYSFVAGEV 527
Query: 62 -----------LKDLFERMEQEG-YVPTTKEALHDVEDEQKKNLLHYHSGRFAIVFGAIS 109
LK++ ++ EG Y+P LHD+EDE+K++ + HS + A+ FG
Sbjct: 528 QNSITEEAYEKLKEIMLKLRVEGCYIPEVGSVLHDIEDEEKEDSVSRHSEKLAVAFGIAR 587
Query: 110 TPDGRTIRLINNL 122
G IR++ NL
Sbjct: 588 LCKGSIIRIVKNL 600
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 73/127 (57%), Gaps = 14/127 (11%)
Query: 10 YVILSNAYAAARRWKDTARLRVSVRNKGMKKTPACSWTEIK-----------SHPYRLRI 58
YV+L+N YA A +W++ A +R S+R K ++K P CSW E+K SHP +
Sbjct: 552 YVMLANMYADAGKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREV 611
Query: 59 NEALKDLFERMEQEGYVPTTKEALHDVEDEQKKNL---LHYHSGRFAIVFGAISTPDGRT 115
NE L+++ ++M++ GYV K A+ ++ + L +HS + A+ FG +ST DG
Sbjct: 612 NEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGEEEMRLGHHSEKLAVAFGLMSTRDGEE 671
Query: 116 IRLINNL 122
I ++ NL
Sbjct: 672 IVVVKNL 678
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.133 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,870,489,276
Number of Sequences: 23463169
Number of extensions: 67559604
Number of successful extensions: 237912
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3347
Number of HSP's successfully gapped in prelim test: 151
Number of HSP's that attempted gapping in prelim test: 231875
Number of HSP's gapped (non-prelim): 3941
length of query: 122
length of database: 8,064,228,071
effective HSP length: 89
effective length of query: 33
effective length of database: 5,976,006,030
effective search space: 197208198990
effective search space used: 197208198990
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)