BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033306
MASKLQQLQSKACQASKFVSQHGTAYYKQLLEQNKQYIQEPPTVEKCNLLSKQLFYTRLA
SIPTRREAFLKELDYVKNLWKNRQDLKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY
YV

High Scoring Gene Products

Symbol, full name Information P value
AT2G19680 protein from Arabidopsis thaliana 1.9e-51
AT4G26210 protein from Arabidopsis thaliana 3.1e-51
AT4G29480 protein from Arabidopsis thaliana 5.1e-51

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033306
        (122 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2051960 - symbol:AT2G19680 species:3702 "Arabi...   534  1.9e-51   1
TAIR|locus:2136789 - symbol:AT4G26210 species:3702 "Arabi...   532  3.1e-51   1
TAIR|locus:2118254 - symbol:AT4G29480 species:3702 "Arabi...   530  5.1e-51   1


>TAIR|locus:2051960 [details] [associations]
            symbol:AT2G19680 species:3702 "Arabidopsis thaliana"
            [GO:0000276 "mitochondrial proton-transporting ATP synthase
            complex, coupling factor F(o)" evidence=IEA] [GO:0015078 "hydrogen
            ion transmembrane transporter activity" evidence=IEA] [GO:0015986
            "ATP synthesis coupled proton transport" evidence=IEA] [GO:0015992
            "proton transport" evidence=ISS] [GO:0005739 "mitochondrion"
            evidence=IDA] InterPro:IPR006808 Pfam:PF04718 GO:GO:0005739
            EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC005169 GO:GO:0015986
            GO:GO:0000276 GO:GO:0015078 KO:K02140 EMBL:AF370542 EMBL:AY072517
            EMBL:AY085346 IPI:IPI00534057 PIR:G84579 RefSeq:NP_001077919.1
            RefSeq:NP_179558.1 UniGene:At.12886 STRING:O82209 PaxDb:O82209
            PRIDE:O82209 EnsemblPlants:AT2G19680.1 EnsemblPlants:AT2G19680.2
            GeneID:816487 KEGG:ath:AT2G19680 TAIR:At2g19680 eggNOG:NOG267144
            HOGENOM:HOG000238234 InParanoid:O82209 OMA:RANLKVE PhylomeDB:O82209
            ProtClustDB:CLSN2683189 ArrayExpress:O82209 Genevestigator:O82209
            Uniprot:O82209
        Length = 122

 Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
 Identities = 102/121 (84%), Positives = 109/121 (90%)

Query:     1 MASKLQQLQSKACQASKFVSQHGTAYYKQLLEQNKQYIQEPPTVEKCNLLSKQLFYTRLA 60
             MASKL QLQSKACQASKFV++HG +YYKQLLEQNKQYIQEP T+EKC+ LSKQL YTRLA
Sbjct:     1 MASKLVQLQSKACQASKFVAKHGNSYYKQLLEQNKQYIQEPATIEKCSELSKQLLYTRLA 60

Query:    61 SIPTRREAFLKELDYVKNLWKNRQDLKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
             SIP R E F KE+DY KNL KNR +LKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY
Sbjct:    61 SIPGRYETFRKEVDYAKNLLKNRANLKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query:   121 Y 121
             Y
Sbjct:   121 Y 121


>TAIR|locus:2136789 [details] [associations]
            symbol:AT4G26210 species:3702 "Arabidopsis thaliana"
            [GO:0015078 "hydrogen ion transmembrane transporter activity"
            evidence=IEA] [GO:0015986 "ATP synthesis coupled proton transport"
            evidence=IEA] [GO:0015992 "proton transport" evidence=ISS]
            [GO:0006626 "protein targeting to mitochondrion" evidence=RCA]
            [GO:0009536 "plastid" evidence=IDA] InterPro:IPR006808 Pfam:PF04718
            GO:GO:0009536 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL049171
            EMBL:AL161564 GO:GO:0015986 GO:GO:0000276 GO:GO:0015078 KO:K02140
            HOGENOM:HOG000238234 ProtClustDB:CLSN2683189 EMBL:AF370342
            EMBL:AY063002 EMBL:AY088514 IPI:IPI00547647 PIR:T06005
            RefSeq:NP_194351.1 RefSeq:NP_974621.1 UniGene:At.2882 STRING:Q9STR3
            PaxDb:Q9STR3 PRIDE:Q9STR3 EnsemblPlants:AT4G26210.1
            EnsemblPlants:AT4G26210.2 GeneID:828727 KEGG:ath:AT4G26210
            TAIR:At4g26210 eggNOG:NOG265340 InParanoid:Q9STR3 OMA:FVSKHGT
            PhylomeDB:Q9STR3 ArrayExpress:Q9STR3 Genevestigator:Q9STR3
            Uniprot:Q9STR3
        Length = 122

 Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
 Identities = 99/121 (81%), Positives = 110/121 (90%)

Query:     1 MASKLQQLQSKACQASKFVSQHGTAYYKQLLEQNKQYIQEPPTVEKCNLLSKQLFYTRLA 60
             MASKL QL+SKAC+ASKFVS+HGT YYKQLL++NK YIQEP T+EKCN LSKQL YTRLA
Sbjct:     1 MASKLLQLKSKACEASKFVSKHGTTYYKQLLDKNKMYIQEPATIEKCNELSKQLLYTRLA 60

Query:    61 SIPTRREAFLKELDYVKNLWKNRQDLKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
             SIP R E+F KE+++VK LWKNR DLKVEDAGIAALFGLECFAW+CAGEIVGRGFTFTGY
Sbjct:    61 SIPGRSESFWKEVNHVKGLWKNRADLKVEDAGIAALFGLECFAWYCAGEIVGRGFTFTGY 120

Query:   121 Y 121
             Y
Sbjct:   121 Y 121


>TAIR|locus:2118254 [details] [associations]
            symbol:AT4G29480 species:3702 "Arabidopsis thaliana"
            [GO:0015078 "hydrogen ion transmembrane transporter activity"
            evidence=IEA] [GO:0015986 "ATP synthesis coupled proton transport"
            evidence=IEA] [GO:0015992 "proton transport" evidence=ISS]
            [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=RCA]
            [GO:0009853 "photorespiration" evidence=RCA] [GO:0019932
            "second-messenger-mediated signaling" evidence=RCA] [GO:0046686
            "response to cadmium ion" evidence=RCA] [GO:0051788 "response to
            misfolded protein" evidence=RCA] [GO:0080129 "proteasome core
            complex assembly" evidence=RCA] InterPro:IPR006808 Pfam:PF04718
            GO:GO:0005739 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161575
            GO:GO:0015986 GO:GO:0000276 GO:GO:0015078 KO:K02140
            HOGENOM:HOG000238234 ProtClustDB:CLSN2683189 EMBL:AF326889
            EMBL:AF339706 EMBL:AY039587 EMBL:AY054144 EMBL:AY088504
            IPI:IPI00527471 PIR:A85344 RefSeq:NP_194677.1 UniGene:At.21381
            STRING:Q9M0D5 PaxDb:Q9M0D5 PRIDE:Q9M0D5 DNASU:829069
            EnsemblPlants:AT4G29480.1 GeneID:829069 KEGG:ath:AT4G29480
            TAIR:At4g29480 eggNOG:NOG287206 InParanoid:Q9M0D5 OMA:YCAGEIA
            PhylomeDB:Q9M0D5 Genevestigator:Q9M0D5 Uniprot:Q9M0D5
        Length = 122

 Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
 Identities = 99/121 (81%), Positives = 108/121 (89%)

Query:     1 MASKLQQLQSKACQASKFVSQHGTAYYKQLLEQNKQYIQEPPTVEKCNLLSKQLFYTRLA 60
             MASKL Q+QSKAC+ASKFV++HGT+YY+QLLE+NKQYIQEP TVEKC  LSKQL YTRLA
Sbjct:     1 MASKLIQVQSKACEASKFVAKHGTSYYRQLLEKNKQYIQEPATVEKCQELSKQLLYTRLA 60

Query:    61 SIPTRREAFLKELDYVKNLWKNRQDLKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
             SIP R E F KE+DY KNLWKNR  LKVEDAGIAALFGLECFAW+CAGEI GRGFTFTGY
Sbjct:    61 SIPGRYETFWKEVDYAKNLWKNRSGLKVEDAGIAALFGLECFAWYCAGEIAGRGFTFTGY 120

Query:   121 Y 121
             Y
Sbjct:   121 Y 121


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.135   0.410    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      122       122   0.00091  102 3  11 22  0.47    30
                                                     29  0.49    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  588 (63 KB)
  Total size of DFA:  137 KB (2085 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.43u 0.08s 14.51t   Elapsed:  00:00:06
  Total cpu time:  14.43u 0.08s 14.51t   Elapsed:  00:00:06
  Start:  Mon May 20 22:32:24 2013   End:  Mon May 20 22:32:30 2013

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