BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033311
(122 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|F4JWS8|QCR72_ARATH Cytochrome b-c1 complex subunit 7-2 OS=Arabidopsis thaliana
GN=QCR7-2 PE=1 SV=1
Length = 122
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 102/122 (83%), Positives = 114/122 (93%)
Query: 1 MASLLQSLLDPKKNWLAAQHMKTISKRLRNFGLRYDDLYDPYYDLDIKEALDRLPREIVD 60
MAS LQ L+DP+KN+LA HMK++S RLR +GLRYDDLYDP YDLDIKEAL+RLPREIVD
Sbjct: 1 MASFLQRLVDPRKNFLARMHMKSVSNRLRRYGLRYDDLYDPLYDLDIKEALNRLPREIVD 60
Query: 61 ARNQRLKRAMDLSMKHEYLPEDLQAMQTPFRNYLQDMLALVKREKAEREALGALPLYQRT 120
ARNQRL RAMDLSMKHEYLP++LQA+QTPFR+YLQDMLALVKRE+AEREALGALPLYQRT
Sbjct: 61 ARNQRLMRAMDLSMKHEYLPDNLQAVQTPFRSYLQDMLALVKRERAEREALGALPLYQRT 120
Query: 121 IP 122
IP
Sbjct: 121 IP 122
>sp|P48502|QCR7_SOLTU Cytochrome b-c1 complex subunit 7 OS=Solanum tuberosum PE=1 SV=1
Length = 123
Score = 204 bits (520), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 101/121 (83%), Positives = 112/121 (92%)
Query: 2 ASLLQSLLDPKKNWLAAQHMKTISKRLRNFGLRYDDLYDPYYDLDIKEALDRLPREIVDA 61
+S + L+DPKKN LAA HMKT+S RLRN+GLR+DDLYDP YDLD+KEAL+RLPREIVDA
Sbjct: 3 SSFSRWLVDPKKNPLAAIHMKTLSSRLRNYGLRHDDLYDPMYDLDVKEALNRLPREIVDA 62
Query: 62 RNQRLKRAMDLSMKHEYLPEDLQAMQTPFRNYLQDMLALVKREKAEREALGALPLYQRTI 121
RNQRL RAMDLSMKH+YLPEDLQAMQTPFRNYLQ+MLALVKRE AEREALGALPLYQRT+
Sbjct: 63 RNQRLLRAMDLSMKHQYLPEDLQAMQTPFRNYLQEMLALVKRESAEREALGALPLYQRTL 122
Query: 122 P 122
P
Sbjct: 123 P 123
>sp|Q9SUU5|QCR71_ARATH Cytochrome b-c1 complex subunit 7-1 OS=Arabidopsis thaliana
GN=QCR7-1 PE=1 SV=1
Length = 122
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/122 (80%), Positives = 111/122 (90%)
Query: 1 MASLLQSLLDPKKNWLAAQHMKTISKRLRNFGLRYDDLYDPYYDLDIKEALDRLPREIVD 60
MASLL++ +DPKKN+LA HMK IS RLR +GLRYDDLYD YY +DIKEA++RLPRE+VD
Sbjct: 1 MASLLKAFIDPKKNFLARMHMKAISTRLRRYGLRYDDLYDQYYSMDIKEAMNRLPREVVD 60
Query: 61 ARNQRLKRAMDLSMKHEYLPEDLQAMQTPFRNYLQDMLALVKREKAEREALGALPLYQRT 120
ARNQRLKRAMDLSMKHEYLP+DLQA+QTPFR YLQDMLALV+RE EREALGALPLYQRT
Sbjct: 61 ARNQRLKRAMDLSMKHEYLPKDLQAVQTPFRGYLQDMLALVERESKEREALGALPLYQRT 120
Query: 121 IP 122
+P
Sbjct: 121 LP 122
>sp|Q5RC24|QCR7_PONAB Cytochrome b-c1 complex subunit 7 OS=Pongo abelii GN=UQCRB PE=3
SV=3
Length = 111
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 32 GLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRAMDLSMKHEYLPEDLQAMQTPFR 91
GL DD Y D D+KEA+ RLP + + R R+KRA+DLS+KH+ LP++
Sbjct: 31 GLMRDDTI--YEDEDVKEAIRRLPENLYNDRMFRIKRALDLSLKHQILPKEQWTKYEEEN 88
Query: 92 NYLQDMLALVKREKAERE 109
YL+ L V RE+ ERE
Sbjct: 89 FYLEPYLKEVIRERKERE 106
>sp|Q9D855|QCR7_MOUSE Cytochrome b-c1 complex subunit 7 OS=Mus musculus GN=Uqcrb PE=1
SV=3
Length = 111
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 46 DIKEALDRLPREIVDARNQRLKRAMDLSMKHEYLPEDLQAMQTPFRNYLQDMLALVKREK 105
D+KEA+ RLP ++ + R R+KRA+DL+M+H+ LP+D + YL+ L V RE+
Sbjct: 43 DVKEAIRRLPEDLYNDRMLRIKRALDLTMRHQILPKDQWTKYEEDKFYLEPYLKEVIRER 102
Query: 106 AERE 109
ERE
Sbjct: 103 KERE 106
>sp|P14927|QCR7_HUMAN Cytochrome b-c1 complex subunit 7 OS=Homo sapiens GN=UQCRB PE=1
SV=2
Length = 111
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 32 GLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRAMDLSMKHEYLPEDLQAMQTPFR 91
GL DD Y D D+KEA+ RLP + + R R+KRA+DL++KH+ LP++
Sbjct: 31 GLMRDDTI--YEDEDVKEAIRRLPENLYNDRMFRIKRALDLNLKHQILPKEQWTKYEEEN 88
Query: 92 NYLQDMLALVKREKAERE 109
YL+ L V RE+ ERE
Sbjct: 89 FYLEPYLKEVIRERKERE 106
>sp|O74533|QCR7_SCHPO Cytochrome b-c1 complex subunit 7 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=qcr7 PE=3 SV=1
Length = 137
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 29 RNFGLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRAMDLSMKHEYLPEDLQAMQT 88
R +GLRYDDL D D ++AL RLP+ R R++RAM LS++++ LP+
Sbjct: 34 RKYGLRYDDLMLEEND-DTQKALSRLPKMESYDRVYRIRRAMQLSIENKILPKSEWTKPE 92
Query: 89 PFRNYLQDMLALVKREKAEREALGAL 114
+YL+ +LA V E+ EREA AL
Sbjct: 93 EDYHYLRPVLAEVIAERKEREAFDAL 118
>sp|P00129|QCR7_BOVIN Cytochrome b-c1 complex subunit 7 OS=Bos taurus GN=UQCRB PE=1 SV=3
Length = 111
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%)
Query: 46 DIKEALDRLPREIVDARNQRLKRAMDLSMKHEYLPEDLQAMQTPFRNYLQDMLALVKREK 105
D+KEA+ RLP + + R R+KRA+DLSM+ + LP++ ++YL+ L V RE+
Sbjct: 43 DVKEAIRRLPENLYNDRVFRIKRALDLSMRQQILPKEQWTKYEEDKSYLEPYLKEVIRER 102
Query: 106 AERE 109
ERE
Sbjct: 103 KERE 106
>sp|Q871K1|QCR7_NEUCR Cytochrome b-c1 complex subunit 7 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=qcr-7 PE=3 SV=1
Length = 123
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 13/117 (11%)
Query: 5 LQSLLDPKKNWL--AAQHMKTISKRLRNFGLRYDDLYDPYYDLDIKEALDRL-PREIVDA 61
L +L P NW AA + R GLR DDL + + AL RL P+E D
Sbjct: 16 LNKMLKPVSNWYINAAGY--------RQMGLRADDLISEENE-TVLAALQRLSPKESYD- 65
Query: 62 RNQRLKRAMDLSMKHEYLPEDLQAMQTPFRNYLQDMLALVKREKAEREALGALPLYQ 118
R R++RA LS+ H+ LP++ Q YL+ ++ ++ E AE++AL L + +
Sbjct: 66 RIYRIRRATQLSLTHKLLPKNEWTTQEEDVPYLRPLIDQIEAEAAEKDALDTLAVVK 122
>sp|O01369|QCR7_FASHE Cytochrome b-c1 complex subunit 7 OS=Fasciola hepatica GN=UBCRBP
PE=3 SV=2
Length = 130
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 32 GLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRAMDLSMKHEYLPEDLQAMQTPFR 91
GL Y D+ P+ L I EA+ RLPRE +AR+ R+ RA LS LP++
Sbjct: 43 GLLYHDVI-PHSPL-IAEAVRRLPREETEARDFRIARAFQLSASKTVLPKEQWTAIEDDI 100
Query: 92 NYLQDMLALVKREKAER 108
YL + + K+E E+
Sbjct: 101 PYLDPYIEVAKKEWKEK 117
>sp|A3CU73|CARB_METMJ Carbamoyl-phosphate synthase large chain OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=carB
PE=3 SV=1
Length = 1056
Score = 36.2 bits (82), Expect = 0.068, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 5/58 (8%)
Query: 64 QRLKRAMDLSMKHE--YLPEDLQ-AMQTPFRNYLQDMLALVKREKAEREALGALPLYQ 118
+++K +DL K E + PED++ A ++ F + +D+LAL K+ E EALG P Y+
Sbjct: 449 EKIKNIVDLERKLETDFEPEDVRVARRSGFSD--EDLLALTKKTAGEIEALGGTPTYK 504
>sp|P49345|QCR7_KLULA Cytochrome b-c1 complex subunit 7 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=QCR7 PE=3 SV=1
Length = 127
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 29 RNFGLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRAMDLSMKHEYLPED 82
R GLR+DDL + +L + AL RLP + AR R+ A LS+ H LP+D
Sbjct: 39 RKMGLRFDDLIEEENEL-AQTALRRLPADESYARIYRIINAHQLSLSHHLLPKD 91
>sp|Q6BNQ5|QCR7_DEBHA Cytochrome b-c1 complex subunit 7 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=QCR7 PE=3 SV=1
Length = 126
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 29 RNFGLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRAMDLSMKHEYLPEDLQAMQT 88
R GL+++DL + +++A+ RLP E + ARN R A S+ H+ LP +
Sbjct: 38 REMGLKFNDLLIEETPV-MQKAISRLPDEEIYARNYRFITAHQCSLSHQLLPANQAVKPE 96
Query: 89 PFRNYLQDMLALVKREKAEREAL 111
+YL + ++E ER L
Sbjct: 97 EDTHYLVPYILEAEKEAFERAEL 119
>sp|P46268|QCR7_CYBJA Cytochrome b-c1 complex subunit 7 OS=Cyberlindnera jadinii
GN=QCR7 PE=3 SV=1
Length = 126
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 29 RNFGLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRAMDLSMKHEYLPED 82
R GL++DDL + +++AL RLP++ + ARN R+ A + H L D
Sbjct: 38 RQLGLKFDDLIHEE-NPTVQKALSRLPKDEIYARNFRMLTAAQCGITHHLLSAD 90
>sp|Q751U4|QCR7_ASHGO Cytochrome b-c1 complex subunit 7 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=QCR7
PE=3 SV=1
Length = 126
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 29 RNFGLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRAMDLSMKHEYLP 80
R GL++DDL D+ ++ AL RLP E AR R+ +A L + H LP
Sbjct: 39 RQLGLKFDDLIAEENDI-VQTALRRLPEEESYARVFRIIQAHQLELTHHLLP 89
>sp|Q54M82|QCR7_DICDI Probable cytochrome b-c1 complex subunit 7 OS=Dictyostelium
discoideum GN=DDB_G0286171 PE=3 SV=1
Length = 109
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 29 RNFGLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRAMDLSMKHEYLPE 81
R GL + DLY+ +E RLP +++ R++RL+ A+DLS+K + LPE
Sbjct: 24 RKMGLYFADLYNN--TEANQEVYRRLPFDVLVQRDRRLRVAIDLSLKKQLLPE 74
>sp|O01374|QCR7_SCHMA Cytochrome b-c1 complex subunit 7 OS=Schistosoma mansoni PE=3 SV=1
Length = 130
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 49 EALDRLPREIVDARNQRLKRAMDLSMKHEYLPEDLQAMQTPFRNYLQDMLALVKREKAER 108
EAL RLPRE+ +AR+ R+ RA L LP++ YL+ + +V +E ++R
Sbjct: 57 EALRRLPRELQEARDFRIARASLLYASKHVLPKEQWTTIEDDIPYLEPYVNVVVKEMSDR 116
>sp|P87515|POLN_BFV Non-structural polyprotein OS=Barmah forest virus PE=2 SV=2
Length = 2410
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 9/87 (10%)
Query: 37 DLYDPYYDL-DIKEALDRLPREIVDARNQRLKRAMDLSMKHEYL-PEDLQAMQTPFRNYL 94
D YD Y D+ D E+ +D + R H YL P+ A+ +PF+N L
Sbjct: 1942 DEYDAYLDMVDGSES-------CLDRSSFSPSRLRSFPKTHSYLDPQINSAVPSPFQNTL 1994
Query: 95 QDMLALVKREKAEREALGALPLYQRTI 121
Q++LA + + LP Y +
Sbjct: 1995 QNVLAAATKRNCNVTQMRELPTYDSAV 2021
>sp|Q03K93|META_STRTD Homoserine O-succinyltransferase OS=Streptococcus thermophilus
(strain ATCC BAA-491 / LMD-9) GN=metA PE=3 SV=1
Length = 314
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 10/63 (15%)
Query: 18 AQHMKTISKRLRNFGLRYDDLYDPYYDLDIKEA--LDRLPREIVDARNQRLKRAMDLSMK 75
A+HM+T K +D++ D YYD I ++++P E VD Q L R D S K
Sbjct: 82 AEHMETFYKT-------FDEIKDKYYDGLIVTGAPVEQMPFEEVDYW-QELTRVFDWSKK 133
Query: 76 HEY 78
H Y
Sbjct: 134 HVY 136
>sp|Q5LZD5|META_STRT1 Homoserine O-succinyltransferase OS=Streptococcus thermophilus
(strain CNRZ 1066) GN=metA PE=3 SV=1
Length = 314
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 10/63 (15%)
Query: 18 AQHMKTISKRLRNFGLRYDDLYDPYYDLDIKEA--LDRLPREIVDARNQRLKRAMDLSMK 75
A+HM+T K +D++ D YYD I ++++P E VD Q L R D S K
Sbjct: 82 AEHMETFYKT-------FDEIKDKYYDGLIVTGAPVEQMPFEEVDYW-QELTRVFDWSKK 133
Query: 76 HEY 78
H Y
Sbjct: 134 HVY 136
>sp|Q6FRZ6|EIF3G_CANGA Eukaryotic translation initiation factor 3 subunit G OS=Candida
glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC
0622 / NRRL Y-65) GN=TIF35 PE=3 SV=1
Length = 274
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 51 LDRLPREIVDARNQRLKRAMDLSMKHEYLPEDLQAMQTPFRNYLQDMLAL 100
LDR R+I++AR Q+LK + ++ M PF+ L ++ AL
Sbjct: 82 LDRNWRKIIEARTQKLKASASKTITCRLCGNAHYTMNCPFKTILSEISAL 131
>sp|P75234|Y544_MYCPN Uncharacterized protein MG366 homolog OS=Mycoplasma pneumoniae
(strain ATCC 29342 / M129) GN=MPN_544 PE=4 SV=1
Length = 664
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 17 AAQHMKTISKRL-RNFGLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRA 69
A+Q +K K++ ++ D + DP +++DI E L+ P + D++N R+K A
Sbjct: 29 ASQLLKKHHKQVDTEIDVQEDLIEDPVFEIDILELLNEAPELLFDSKNPRVKEA 82
>sp|B0S169|SYT_FINM2 Threonine--tRNA ligase OS=Finegoldia magna (strain ATCC 29328)
GN=thrS PE=3 SV=1
Length = 634
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 26/41 (63%)
Query: 71 DLSMKHEYLPEDLQAMQTPFRNYLQDMLALVKREKAEREAL 111
DL H+++PEDL+ ++ + +++ LV+ E + +EAL
Sbjct: 105 DLDTDHKFVPEDLEKIEAEMKKIVKENPKLVRVEISRKEAL 145
>sp|P22010|GRP78_KLULA 78 kDa glucose-regulated protein homolog OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=GRP78 PE=3 SV=1
Length = 679
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 7/77 (9%)
Query: 10 DPKKNWLAAQHMKTISKRLRNFGLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRA 69
D KN A+ TI R GL+Y+D P DIK LP +V+ N+
Sbjct: 100 DAAKNQAASNPKNTIFDIKRLIGLQYND---PTVQRDIKH----LPYTVVNKGNKPYVEV 152
Query: 70 MDLSMKHEYLPEDLQAM 86
K E+ PE++ M
Sbjct: 153 TVKGEKKEFTPEEVSGM 169
>sp|P16474|GRP78_YEAST 78 kDa glucose-regulated protein homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=KAR2 PE=1
SV=1
Length = 682
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 13/80 (16%)
Query: 10 DPKKNWLAAQHMKTISKRLRNFGLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRA 69
D KN +AA TI R GL+Y+ D +++ + LP +V N+ K A
Sbjct: 99 DAAKNQVAANPQNTIFDIKRLIGLKYN-------DRSVQKDIKHLPFNVV---NKDGKPA 148
Query: 70 MDLSMKHE---YLPEDLQAM 86
+++S+K E + PE++ M
Sbjct: 149 VEVSVKGEKKVFTPEEISGM 168
>sp|Q8TK55|ARGJ_METAC Arginine biosynthesis bifunctional protein ArgJ OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=argJ PE=3 SV=1
Length = 395
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 32/63 (50%)
Query: 47 IKEALDRLPREIVDARNQRLKRAMDLSMKHEYLPEDLQAMQTPFRNYLQDMLALVKREKA 106
+ E+LD P + A + R +D+S E+LPE L+ + + L A++ +KA
Sbjct: 91 LSESLDLEPDTVAVASTGVIGRRLDVSWIREHLPEVLEGLGSSPECSLAAAKAIMTTDKA 150
Query: 107 ERE 109
+E
Sbjct: 151 LKE 153
>sp|Q0RAT5|POTA_FRAAA Spermidine/putrescine import ATP-binding protein PotA OS=Frankia
alni (strain ACN14a) GN=potA PE=3 SV=1
Length = 465
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 45 LDIKEALDRLPREIVDARNQR--LKRAMDLSMKHEYLPEDLQAMQTPFRNYLQDMLALVK 102
+++ E DR PRE+ + QR L RA+ L E L A+ R +Q L ++
Sbjct: 151 VELSELADRRPRELSGGQQQRVALARALVNRPAALLLDEPLGALDLKLRQTMQIQLKAIQ 210
Query: 103 RE 104
RE
Sbjct: 211 RE 212
>sp|Q5M3Y7|META_STRT2 Homoserine O-succinyltransferase OS=Streptococcus thermophilus
(strain ATCC BAA-250 / LMG 18311) GN=metA PE=3 SV=1
Length = 314
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 10/63 (15%)
Query: 18 AQHMKTISKRLRNFGLRYDDLYDPYYDLDIKEA--LDRLPREIVDARNQRLKRAMDLSMK 75
A+HM+T K +D++ D YYD I ++++P E VD Q L R D S
Sbjct: 82 AEHMETFYKT-------FDEIKDKYYDGLIVTGAPVEQMPFEEVDYW-QELTRVFDWSKN 133
Query: 76 HEY 78
H Y
Sbjct: 134 HVY 136
>sp|C4ZBG8|FTHS_EUBR3 Formate--tetrahydrofolate ligase OS=Eubacterium rectale (strain
ATCC 33656 / VPI 0990) GN=fhs PE=3 SV=1
Length = 556
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 14/67 (20%)
Query: 16 LAAQHMKTISKRLRNFGLRYDDLYDPYYDLDIKEALDRLPREIVD--------ARNQRLK 67
LA + ++TI + NF + YDD L +KE ++ + +EI A + LK
Sbjct: 419 LANKVLETIEHKESNFKVLYDD------SLSLKEKIETVAKEIYGADGVTYSPAAERELK 472
Query: 68 RAMDLSM 74
R DL M
Sbjct: 473 RITDLGM 479
>sp|Q87SV4|THIQ_VIBPA Thiamine import ATP-binding protein ThiQ OS=Vibrio parahaemolyticus
serotype O3:K6 (strain RIMD 2210633) GN=thiQ PE=3 SV=1
Length = 234
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 45 LDIKEALDRLPREIVDARNQRLKRAMDLSMKHEY--LPEDLQAMQTPFRNYLQDMLALVK 102
+ + E LDRLP + + QR+ A H L E A+ R ++ML+LVK
Sbjct: 117 VGVAEYLDRLPEHLSGGQRQRVALARCFVQPHPMWLLDEPFSALDPVLR---EEMLSLVK 173
Query: 103 REKAER 108
+ AER
Sbjct: 174 KLAAER 179
>sp|Q5KWD2|SYT_GEOKA Threonine--tRNA ligase OS=Geobacillus kaustophilus (strain HTA426)
GN=thrS PE=3 SV=1
Length = 652
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 26/41 (63%)
Query: 71 DLSMKHEYLPEDLQAMQTPFRNYLQDMLALVKREKAEREAL 111
D+ M+H+ P+DL ++ R +++ L +V++E + EA+
Sbjct: 108 DIDMEHKLTPDDLPKIEAEMRKIVKENLDIVRKEVSREEAI 148
>sp|P39298|YJFP_ECOLI Esterase YjfP OS=Escherichia coli (strain K12) GN=yjfP PE=4 SV=1
Length = 249
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 9/92 (9%)
Query: 5 LQSLLDPKKNWLAAQHMKTISKR--LRNFGLRYDDLYDPYYDLDIKEALDRLPREIVDAR 62
+++ P W A H++ +S R L GL DD+ L +++AL R
Sbjct: 165 FNNIVAPLAEWEATNHLEQLSDRPLLLWHGLD-DDVVPADESLRLQQALSE------TGR 217
Query: 63 NQRLKRAMDLSMKHEYLPEDLQAMQTPFRNYL 94
++ L + ++H PE L A T FR +L
Sbjct: 218 DKLLTCSWQPGVRHRITPEALDAAVTFFRQHL 249
>sp|P47606|Y366_MYCGE Uncharacterized protein MG366 OS=Mycoplasma genitalium (strain
ATCC 33530 / G-37 / NCTC 10195) GN=MG366 PE=4 SV=1
Length = 667
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 24/36 (66%)
Query: 40 DPYYDLDIKEALDRLPREIVDARNQRLKRAMDLSMK 75
DP ++LD+ E L+ P ++D++N R++ A ++ K
Sbjct: 52 DPVFELDVLELLNEDPMLLLDSKNPRVQEAKIIANK 87
>sp|Q6FSJ2|QCR7_CANGA Cytochrome b-c1 complex subunit 7 OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=QCR7 PE=3 SV=1
Length = 128
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 29 RNFGLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRAMDLSMKHEYLPED 82
R GLR+DDL + ++ AL RLP ARN R+ RA + LP +
Sbjct: 39 RKLGLRFDDLIAEENPI-MQTALKRLPEGESYARNYRIIRAHQSELTKHLLPRN 91
>sp|Q5AEF0|CAF17_CANAL Putative transferase CAF17, mitochondrial OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=CAF17 PE=3 SV=1
Length = 469
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 17/19 (89%)
Query: 29 RNFGLRYDDLYDPYYDLDI 47
+N+GL ++D+YDP Y+++I
Sbjct: 65 KNYGLMHEDIYDPDYNINI 83
>sp|Q2R1U4|CK5P1_ORYSJ CDK5RAP1-like protein OS=Oryza sativa subsp. japonica
GN=Os11g0592800 PE=2 SV=1
Length = 600
Score = 29.3 bits (64), Expect = 7.7, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 9 LDPKKNWLAAQHMKTISKRLRNFGLRYDDLYD 40
L+P KNW ++ ++ K ++N GLR+ DL D
Sbjct: 318 LEPGKNWELSEGFSSMCK-VKNMGLRFADLLD 348
>sp|Q9GP40|QCR7_ECHMU Cytochrome b-c1 complex subunit 7 OS=Echinococcus multilocularis
GN=UBCRBP PE=2 SV=1
Length = 130
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 32 GLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRAMDLSMKHEYLPEDLQAMQTPFR 91
GLR+ D+ + ++EA RLPRE + + RL RA LS L ++ Q
Sbjct: 43 GLRWHDIMP--RNAVVEEAFRRLPREEREDMDFRLARATLLSANKTILSKEEWTKQEEDV 100
Query: 92 NYLQDMLALVKRE 104
YL + L++RE
Sbjct: 101 PYLDPYIKLIERE 113
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,737,950
Number of Sequences: 539616
Number of extensions: 1683146
Number of successful extensions: 6310
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 6282
Number of HSP's gapped (non-prelim): 55
length of query: 122
length of database: 191,569,459
effective HSP length: 89
effective length of query: 33
effective length of database: 143,543,635
effective search space: 4736939955
effective search space used: 4736939955
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)