BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033312
(122 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZPV8|COAD_ARATH Phosphopantetheine adenylyltransferase OS=Arabidopsis thaliana
GN=COAD PE=1 SV=1
Length = 176
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 90/106 (84%), Positives = 101/106 (95%)
Query: 12 NSNISPDNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELI 71
+S +SP NS+GAVVLGGTFDRLHDGHR+FLKA+AELARDRIVVGVCDGPMLT KQF+++I
Sbjct: 6 DSKMSPANSFGAVVLGGTFDRLHDGHRMFLKAAAELARDRIVVGVCDGPMLTKKQFSDMI 65
Query: 72 QPVDERMRNVEAYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVV 117
QP++ERMRNVE Y+KSIKPELVVQ EPITDPYGPSIVDENLEAIVV
Sbjct: 66 QPIEERMRNVETYVKSIKPELVVQAEPITDPYGPSIVDENLEAIVV 111
>sp|Q13057|COASY_HUMAN Bifunctional coenzyme A synthase OS=Homo sapiens GN=COASY PE=1 SV=4
Length = 564
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 65/108 (60%)
Query: 10 VVNSNISPDNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAE 69
V S P Y +GGTFDRLH+ H++ L + LA++++VVGV D +L +K E
Sbjct: 180 VAGSPKQPVRGYYRGAVGGTFDRLHNAHKVLLSVACILAQEQLVVGVADKDLLKSKLLPE 239
Query: 70 LIQPVDERMRNVEAYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVV 117
L+QP ER+ ++ ++ IKP L P+ DPYGP+ D +LE +VV
Sbjct: 240 LLQPYTERVEHLSEFLVDIKPSLTFDVIPLLDPYGPAGSDPSLEFLVV 287
>sp|Q9DBL7|COASY_MOUSE Bifunctional coenzyme A synthase OS=Mus musculus GN=Coasy PE=1 SV=2
Length = 563
Score = 89.7 bits (221), Expect = 5e-18, Method: Composition-based stats.
Identities = 44/108 (40%), Positives = 65/108 (60%)
Query: 10 VVNSNISPDNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAE 69
V S P Y +GGTFDRLH+ H++ L + LA++++VVGV D +L +K E
Sbjct: 179 VARSPRQPVRGYHRGAVGGTFDRLHNAHKVLLSVACVLAQEQLVVGVADKDLLKSKLLPE 238
Query: 70 LIQPVDERMRNVEAYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVV 117
L+QP ER+ ++ ++ IKP L + P+ DPYGP+ D LE +VV
Sbjct: 239 LLQPYAERVEHLTEFLVDIKPSLTFELVPLLDPYGPAGSDPTLEFLVV 286
>sp|P53332|COAD_YEAST Phosphopantetheine adenylyltransferase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CAB4 PE=1 SV=1
Length = 305
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 60/99 (60%)
Query: 19 NSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERM 78
N + LGGTFD +HDGH++ L S + R++ G+ +L NK++ ELI+P D R
Sbjct: 140 NKFHVTALGGTFDHIHDGHKILLSVSTFITSQRLICGITCDELLQNKKYKELIEPYDTRC 199
Query: 79 RNVEAYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVV 117
R+V +IK +KP+L V+ P+ D GP+ +E +VV
Sbjct: 200 RHVHQFIKLLKPDLSVELVPLRDVCGPTGKVPEIECLVV 238
>sp|Q8MIR4|COASY_PIG Bifunctional coenzyme A synthase OS=Sus scrofa GN=COASY PE=1 SV=1
Length = 562
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 65/108 (60%)
Query: 10 VVNSNISPDNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAE 69
V S P + +GGTFDRLH+ H++ L + LA++++VVGV D +L +K E
Sbjct: 179 VARSAKQPVRGHQRGAVGGTFDRLHNAHKVLLSVACILAQEQLVVGVADKDLLKSKLLPE 238
Query: 70 LIQPVDERMRNVEAYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVV 117
L+QP ER+ ++ ++ IKP L P+ DPYGP+ D +LE +VV
Sbjct: 239 LLQPYTERVEHLSEFLVDIKPSLSFDLIPLLDPYGPAGSDPSLEFLVV 286
>sp|Q8ZY96|COAD_PYRAE Phosphopantetheine adenylyltransferase OS=Pyrobaculum aerophilum
(strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC
100827) GN=coaD PE=3 SV=1
Length = 155
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVC-DGPMLTNKQFAELIQPVDERMRNVE 82
VVLGGTFD LH GH + L A+A L DRI++G+ D T KQ+ ++P R+ N+
Sbjct: 8 VVLGGTFDTLHSGH-VKLLATATLIGDRILIGLTSDSFASTYKQYK--VRPFSVRLANLR 64
Query: 83 AYIKSIKPELVVQTEPITDPYGPSIVDENLEAIV 116
+ I PE V I DPYGP++ D LEAIV
Sbjct: 65 NLMSLIAPEREVAYVEIHDPYGPAVFDPRLEAIV 98
>sp|Q10350|YDA8_SCHPO Uncharacterized protein C1F12.08 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC1F12.08 PE=4 SV=2
Length = 316
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 53/92 (57%)
Query: 26 LGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYI 85
+GGTFD LH GH++ L +A ++VGV +L K E ++ + +R V ++
Sbjct: 161 VGGTFDHLHVGHKVLLTLTAWFGVKEVIVGVSGDELLKKKVQKEFLENIQKRKEEVSNFL 220
Query: 86 KSIKPELVVQTEPITDPYGPSIVDENLEAIVV 117
SIK ++ + I DP+GP+I D +++++V
Sbjct: 221 HSIKEDINCRVVTIHDPFGPTITDAEIDSLIV 252
>sp|Q8TGY4|COAD_METKA Phosphopantetheine adenylyltransferase OS=Methanopyrus kandleri
(strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)
GN=coaD PE=3 SV=1
Length = 157
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 15 ISPDNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPV 74
++P + VV+GGTFDRLH GH+ L + EL DR+V+GV + ++ + ++P
Sbjct: 1 MTPLARFRKVVVGGTFDRLHLGHQRLLSVALELG-DRVVIGVTTDSFV-REEGKKGVEPF 58
Query: 75 DERMRNVEAYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVV 117
+ER+R V +++ V+ P+ D YG ++ D+ ++AIVV
Sbjct: 59 EERVRAVRRFVEEKGASDRVEIVPLEDRYGTTLEDDEMDAIVV 101
>sp|O27918|COAD_METTH Phosphopantetheine adenylyltransferase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=coaD PE=3 SV=2
Length = 164
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 20 SYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMR 79
Y V +GGTFDR H GHR L + + + +++GV K E I+P RM+
Sbjct: 4 KYSLVAVGGTFDRFHKGHRRLLDEAFRVG-ETVMIGVTSDEFAAAK--GEGIEPCSVRMK 60
Query: 80 NVEAYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVV 117
N+E Y++ + V + DPYG ++ DE EAIVV
Sbjct: 61 NLEEYLRDKDADYHVMR--LDDPYGTTVTDEAFEAIVV 96
>sp|Q5JHE8|COAD_PYRKO Phosphopantetheine adenylyltransferase OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=coaD PE=3 SV=1
Length = 165
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 19 NSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERM 78
Y VV+GGTFDRLH GH+ L+ + E+ + + +G+ M+ NK +AE I P + R+
Sbjct: 3 KKYRKVVVGGTFDRLHLGHKALLRKAFEVGKI-VYIGLTSDEMVRNKPYAERILPYEHRL 61
Query: 79 RNVEAYI 85
+++ +I
Sbjct: 62 KDLLKFI 68
>sp|Q9UYT0|COAD_PYRAB Phosphopantetheine adenylyltransferase OS=Pyrococcus abyssi (strain
GE5 / Orsay) GN=coaD PE=1 SV=3
Length = 157
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 59/100 (59%), Gaps = 6/100 (6%)
Query: 20 SYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMR 79
+ VV+GGTFDRLH GH+ L+ + E+ + + +G+ M+ NK +AE I P + R++
Sbjct: 3 KFKKVVVGGTFDRLHLGHKALLRKAFEVGKI-VYIGLTSDDMVKNKPYAEKILPYERRLK 61
Query: 80 NVEAYIK--SIKPELVVQTEPITDPYGPSIVDENLEAIVV 117
++ +++ + + +++ I + G + +LEAIVV
Sbjct: 62 DLIEFLEVNNFRRYRIIK---INNAIGFTTRIRSLEAIVV 98
>sp|C5A3G3|COAD_THEGJ Phosphopantetheine adenylyltransferase OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=coaD PE=3 SV=1
Length = 159
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERM 78
Y VV+GGTFDRLH GH+ L+ + E+ R + VG+ M+ NK +AE I P + R+
Sbjct: 5 YRKVVVGGTFDRLHLGHKALLRKAFEVGR-YVYVGLTSDEMIRNKPYAEKILPYELRL 61
>sp|O58358|COAD_PYRHO Phosphopantetheine adenylyltransferase OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=coaD PE=3 SV=2
Length = 158
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 58/99 (58%), Gaps = 6/99 (6%)
Query: 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRN 80
+ VV+GGTFDRLH GH+ L+ + E+ + + +G+ M+ K +AE I P + R+++
Sbjct: 4 FKKVVVGGTFDRLHLGHKALLRKAFEVGKI-VYIGLTSDEMVKEKPYAEKILPYERRLKD 62
Query: 81 VEAYIK--SIKPELVVQTEPITDPYGPSIVDENLEAIVV 117
+ +++ + K +++ I + G + +LEAIVV
Sbjct: 63 LIEFLEVNNFKGYRIIK---INNAIGFTTEIRSLEAIVV 98
>sp|Q8U1X0|COAD_PYRFU Phosphopantetheine adenylyltransferase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=coaD
PE=3 SV=1
Length = 160
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 27 GGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86
GGTFDRLH GH+ L+ + E+ + + +G+ M+ KQ++E I P ++R+ ++ +++
Sbjct: 11 GGTFDRLHLGHKALLRKAFEVG-EIVYIGLTSDEMIKEKQYSERILPYEKRLLDLIKFLE 69
Query: 87 SIKPELVVQTEPITDPYGPSIVDENLEAIVV 117
+ + I + G + ++LEAIVV
Sbjct: 70 -VNKYRNYRIMKIHNAIGFTTKIKSLEAIVV 99
>sp|Q58436|COAD_METJA Phosphopantetheine adenylyltransferase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=coaD PE=3 SV=1
Length = 147
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83
VV+GGTFD LH GH+ LK ++ L ++ +G+ K I + R+ N++
Sbjct: 3 VVVGGTFDILHRGHKELLKFASSLG--KLTIGITSDE-FAKKYKTHKINDLKTRIENLKK 59
Query: 84 YIKSIKPELVVQTEPITDPYGPSIVDENLEAIVV 117
++ SIK + ++ I D YG +I E+ + IVV
Sbjct: 60 FLDSIKADYEIKV--INDAYGDAIT-EDYDIIVV 90
>sp|Q46A30|COAD_METBF Phosphopantetheine adenylyltransferase OS=Methanosarcina barkeri
(strain Fusaro / DSM 804) GN=coaD PE=3 SV=1
Length = 161
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARD-RIVVGVCDGPMLTNKQFAELIQPVDERMRNVE 82
V +GGTF HDGH ++ + E+A D ++ +G+ ML+ + + ++R +
Sbjct: 4 VAVGGTFQYFHDGHAKLIEKAFEIAEDGKVHIGLTSDEMLSK---SHSVDNYEKRRNWLL 60
Query: 83 AYIKSIK-PELVVQTEPITDPYGPSIVDENLEAIVV 117
YIK + P+ + + DPYGP++ +E+ + I+V
Sbjct: 61 QYIKEMGIPDDRYEITKLNDPYGPAL-EEDFDYIIV 95
>sp|O28077|COAD_ARCFU Phosphopantetheine adenylyltransferase OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=coaD PE=1 SV=1
Length = 148
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83
V LGGTF+ LH+GH+ + + +L I +GV M + + L P R NV+
Sbjct: 3 VALGGTFEPLHEGHKKLIDVAIKLGGRDITIGVTSDRMARARIRSVL--PFAIRAENVKR 60
Query: 84 YIK---SIKPELVVQTEPITDPYGPSIVDENLEAIVV 117
Y+ +PE+V IT+PYG ++ D + E +VV
Sbjct: 61 YVMRKYGFEPEIV----KITNPYGKTL-DVDFEYLVV 92
>sp|Q97BQ0|COPP_THEVO Bifunctional phosphopantetheine adenylyltransferase/NTP phosphatase
OS=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299
/ JCM 9571 / NBRC 15438 / GSS1) GN=coaD PE=3 SV=1
Length = 328
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83
V+GGTF +LH GH+ L+ + E + ++ D + NK + + P ER RN+
Sbjct: 3 TVVGGTFSKLHKGHKALLEKAIETGNEIVIGLTSDEYVKRNKVYPAI--PYKERYRNLYN 60
Query: 84 YIKSIKPELVVQTEPITDPYGPSIVDENLEAIVV 117
Y+ +K + PI D G + + + E IVV
Sbjct: 61 YM--VKKTNKFRIRPIDDRNGNAPYERDYEIIVV 92
>sp|Q8PZN4|COAD_METMA Phosphopantetheine adenylyltransferase OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=coaD PE=3 SV=1
Length = 154
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELA-RDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVE 82
V +GGTF LHDGH ++ + E+A ++ +G+ ML E + R+
Sbjct: 4 VAVGGTFQYLHDGHARLIEKAFEIAGSGKVYIGLTSDEMLQKNHSVESYKIRRSRLLE-- 61
Query: 83 AYIKSIK-PELVVQTEPITDPYGPSIVDENLEAIVV 117
YIK + PE + + DP GP+I +E+ + I+V
Sbjct: 62 -YIKKMGVPEEKYEVTRLNDPCGPTI-EEDFDHIIV 95
>sp|Q8TK70|COAD_METAC Phosphopantetheine adenylyltransferase OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=coaD PE=3 SV=1
Length = 156
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARD-RIVVGVCDGPMLTNKQFAELIQPVDERMRNVE 82
V +GGTF LHDGH ++ + E+A D ++ +G+ ML + + + R+R +E
Sbjct: 4 VAVGGTFQYLHDGHARLIEKAFEIAGDGKVYIGLTSDEMLQKNHSIDNYE--NRRVRLLE 61
Query: 83 AYIKSIK-PELVVQTEPITDPYGPSIVDENLEAIVV 117
YI ++ P+ + + DP GP+ V+E+ + IVV
Sbjct: 62 -YIDEMEIPKEKYEITRLNDPCGPT-VEEDFDYIVV 95
>sp|E3GWN9|RIBL_METFV FAD synthase OS=Methanothermus fervidus (strain ATCC 43054 / DSM
2088 / JCM 10308 / V24 S) GN=ribL PE=3 SV=1
Length = 145
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 18/84 (21%)
Query: 28 GTFDRLHDGHRLFLKASAEL-----------ARDRIVVGVCDGPMLTNKQFAE---LIQP 73
GTFD +H GH +LK + EL ARD V P++ KQ E +++P
Sbjct: 4 GTFDIIHPGHGFYLKKAKELGGKNSKLVVIVARDSTVRARKRKPVINEKQRLEVVKMLKP 63
Query: 74 VDERMRNVEA----YIKSIKPELV 93
VDE E ++ IKP+++
Sbjct: 64 VDEAYLGCEGDIFKTVEKIKPDII 87
>sp|Q5JHT4|RIBL_PYRKO FAD synthase OS=Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM
12380 / KOD1) GN=ribL PE=3 SV=1
Length = 149
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDER---MRN 80
V++GG FD LH GH FLK + EL D +VV V + ++ E I P ++R +R
Sbjct: 10 VLVGGVFDILHVGHIHFLKQAKELG-DELVVIVAHDETVRMQKRREPINPAEDRAELLRA 68
Query: 81 V----EAYI---KSIKPELVVQTEPITDPYGP 105
+ E YI +I ELV + +P GP
Sbjct: 69 IRYVDEVYIGTPGTIDMELVKRIDPDVIAIGP 100
>sp|C5A1S7|RIBL_THEGJ FAD synthase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM
11827 / EJ3) GN=ribL PE=3 SV=1
Length = 151
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDER---MRN 80
V++GG FD LH GH FLK + EL + +V+ D + NK+ I P ++R +R
Sbjct: 12 VLVGGVFDILHVGHVHFLKQAKELGDELVVIVAHDETVRRNKR-RNPINPAEDRAELLRA 70
Query: 81 V----EAYIKS---IKPELVVQTEPITDPYGPSIVDENL 112
+ E YI S I ELV + P GP D+N
Sbjct: 71 IRYVDEVYIGSPGGIDFELVRRINPDVIAIGP---DQNF 106
>sp|Q9HIY2|COPP_THEAC Bifunctional phosphopantetheine adenylyltransferase/NTP phosphatase
OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM
1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=coaD PE=3
SV=1
Length = 328
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83
V+GGTF +LH GH+ L + + + ++ D + NK + + P R R +
Sbjct: 3 TVVGGTFSKLHKGHKALLNTAIDTGNEVVIGLTSDEYVKKNKVYPAI--PYSVRYRTLYN 60
Query: 84 YIKSIKPELVVQTEPITDPYGPSIVDENLEAIVV 117
Y+ IK + I D G + +++ E IVV
Sbjct: 61 YM--IKRTNKFRIRQIDDRNGNAPYEKDYEVIVV 92
>sp|Q493X3|HLDE_BLOPB Bifunctional protein HldE OS=Blochmannia pennsylvanicus (strain
BPEN) GN=hldE PE=3 SV=1
Length = 477
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 1 MKMAILDESVVNSNISPDNSYGA--VVLGGTFDRLHDGHRLFLKASAELARDRIVVGV-C 57
+ + ILDE + IS + G V+ G FD LH GH +L + +L DR++V V
Sbjct: 320 LPVGILDEKTLKQTISVVRNRGEKIVMTNGVFDILHSGHVSYLTNAKKLG-DRLIVAVNS 378
Query: 58 DGPMLTNKQFAELIQPVDERM 78
DG K I +++RM
Sbjct: 379 DGSTRRLKGKTRPINTLEQRM 399
>sp|O58466|RIBL_PYRHO FAD synthase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM
12428 / JCM 9974 / NBRC 100139 / OT-3) GN=ribL PE=3
SV=1
Length = 148
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83
VV+GG FD +H GH FLK + EL D ++V V + ++ I P ++R ++A
Sbjct: 9 VVVGGVFDIIHAGHVHFLKMAKELG-DELIVIVAHDETVKKRKGRPPINPAEDRAEVLKA 67
>sp|Q9UZ37|RIBL_PYRAB FAD synthase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ribL
PE=3 SV=1
Length = 148
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 19 NSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERM 78
N VV+GG FD LH GH FLK + EL D ++V V + ++ I P ++R
Sbjct: 4 NRRIRVVVGGVFDILHVGHIHFLKMAKELG-DELIVIVAHDETVKKRKGRPPINPAEDRA 62
Query: 79 RNVEA 83
+ A
Sbjct: 63 EVLRA 67
>sp|B6ELZ7|HLDE_ALISL Bifunctional protein HldE OS=Aliivibrio salmonicida (strain
LFI1238) GN=hldE PE=3 SV=1
Length = 476
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 14/84 (16%)
Query: 3 MAILDESVVNSNISPDNSYG--AVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGP 60
I++E ++ S + G V+ G FD LH GH +L +AEL DR++V V
Sbjct: 320 FGIINEELLISAVKQARERGEKVVMTNGCFDILHAGHVYYLNHAAELG-DRLIVAVN--- 375
Query: 61 MLTNKQFAEL------IQPVDERM 78
TN+ L I P D RM
Sbjct: 376 --TNESVQRLKGPGRPINPTDRRM 397
>sp|Q8TXT2|RIBL_METKA FAD synthase OS=Methanopyrus kandleri (strain AV19 / DSM 6324 /
JCM 9639 / NBRC 100938) GN=ribL PE=3 SV=1
Length = 150
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 18/89 (20%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAEL-----------ARDRIVVGVCDGPMLTNKQFAELI- 71
V+ GG FD LH GH FL+ + ++ ARD V + P++ +Q ++
Sbjct: 5 VLAGGVFDILHPGHVAFLEEARKIAGKNGELVVVVARDETVRRLKRTPIVPEEQRVRMVS 64
Query: 72 --QPVDERM----RNVEAYIKSIKPELVV 94
+PVD + R+ +K++KP++VV
Sbjct: 65 ALKPVDRAILGHPRDFSITLKTVKPDVVV 93
>sp|Q07Y78|HLDE_SHEFN Bifunctional protein HldE OS=Shewanella frigidimarina (strain NCIMB
400) GN=hldE PE=3 SV=1
Length = 476
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTN-KQFAELIQPVDERM 78
V+ G FD LH GH +L+ + L DR++V V D +T K + PVD RM
Sbjct: 344 VMTNGCFDILHAGHVSYLQQAKALG-DRLIVAVNDDSSVTRLKGPGRPVNPVDRRM 398
>sp|Q3IHX7|HLDE_PSEHT Bifunctional protein HldE OS=Pseudoalteromonas haloplanktis (strain
TAC 125) GN=hldE PE=3 SV=1
Length = 479
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 6 LDESVVNSNISPDNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNK 65
D+ + + + N V G FD LH GH +L A A+ DR+VVG+ + ++
Sbjct: 327 FDDVLQHIEFAKQNGETIVFTNGCFDILHAGHVRYL-AQAKARGDRLVVGLNNDASISRL 385
Query: 66 QFAEL-IQPVDER 77
+ A+ I P+DER
Sbjct: 386 KGADRPINPLDER 398
>sp|D5VUB0|RIBL_METIM FAD synthase OS=Methanocaldococcus infernus (strain DSM 11812 /
JCM 15783 / ME) GN=ribL PE=3 SV=1
Length = 145
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 16/87 (18%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCD---------GPMLTNKQ---FAELI 71
VV GTFD LH GH FLK + L + IV+ D P++ +Q E +
Sbjct: 4 VVAAGTFDILHPGHYEFLKFAKSLGDELIVIVARDKTVEKIKGRKPIIPEEQRRAMVEAL 63
Query: 72 QPVDE----RMRNVEAYIKSIKPELVV 94
+PVD+ + N I +KP+++V
Sbjct: 64 KPVDKAILGSLNNKLEPIIELKPDIIV 90
>sp|A4SGY4|NADD_PROVI Probable nicotinate-nucleotide adenylyltransferase
OS=Prosthecochloris vibrioformis (strain DSM 265)
GN=nadD PE=3 SV=1
Length = 193
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 25 VLGGTFDRLHDGH-RLFLKASAELARDRIVVGVCDGPM 61
VLGGTFD H+GH L L A L DR+++ V D P+
Sbjct: 5 VLGGTFDPPHNGHLALALFARELLCVDRLILSVSDNPL 42
>sp|C6A439|RIBL_THESM FAD synthase OS=Thermococcus sibiricus (strain MM 739 / DSM
12597) GN=ribL PE=3 SV=1
Length = 148
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVV 54
VV GG FD LH GH FLK + EL + +V+
Sbjct: 9 VVTGGVFDILHVGHIHFLKQAKELGDELVVI 39
>sp|A0B7A6|RIBL_METTP FAD synthase OS=Methanosaeta thermophila (strain DSM 6194 / PT)
GN=ribL PE=3 SV=1
Length = 143
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83
V+ GTFD LH GH L+L+ S L + +VV D + K + P D+R+R V A
Sbjct: 8 VMATGTFDILHPGHLLYLERSRALGDELVVVVARD---INVKHKPRPVVPEDQRLRMVSA 64
>sp|Q12YR1|RIBL_METBU FAD synthase OS=Methanococcoides burtonii (strain DSM 6242)
GN=ribL PE=3 SV=1
Length = 143
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83
V+ GTFD LH GH FL+ + D + V V M+ +K A+ I P +R++ + A
Sbjct: 4 VLATGTFDLLHPGHVFFLRQARSFG-DELYVLVARDSMIKHK--AQPIVPEGQRLKMISA 60
Query: 84 Y 84
+
Sbjct: 61 F 61
>sp|D3S3T0|RIBL_METSF FAD synthase OS=Methanocaldococcus sp. (strain FS406-22) GN=ribL
PE=3 SV=1
Length = 151
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCD---------GPMLTNKQFAELIQ-- 72
VV GTFD LH GH LK + L + IV+ D P++ +Q E+++
Sbjct: 7 VVTAGTFDILHPGHYEILKFAKSLGDELIVIVARDETVKKLKGRKPIIPEEQRREMVEAL 66
Query: 73 -PVDE----RMRNVEAYIKSIKPELVV----QTEPITDPYGPSIVDENLEAIVVRY 119
PVD+ ++N I +KP+++V QT + + NL +VR+
Sbjct: 67 KPVDKAVLGSLKNKLEPILKLKPDIIVLGPDQTTFDEETLKQELAKYNLYPEIVRF 122
>sp|A6UWK8|RIBL_META3 FAD synthase OS=Methanococcus aeolicus (strain Nankai-3 / ATCC
BAA-1280) GN=ribL PE=3 SV=1
Length = 156
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 18/94 (19%)
Query: 18 DNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDG------------PMLTNK 65
D + V+ GTFD LH GH LK + L + IVV D P +
Sbjct: 5 DKTKKIVLTAGTFDLLHPGHHNTLKYAKSLGDELIVVIARDETVKKIKGRKPVIPENQRR 64
Query: 66 QFAELIQPVDERM-----RNVEAYIKSIKPELVV 94
+ E I+PVD+ + +E +K IKP+++V
Sbjct: 65 EMIEAIKPVDKAILGSLTDKLEPILK-IKPDIIV 97
>sp|B7V388|HLDE_PSEA8 Bifunctional protein HldE OS=Pseudomonas aeruginosa (strain LESB58)
GN=hldE PE=3 SV=1
Length = 473
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 28 GTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTN-KQFAELIQPVDERM 78
G FD LH GH +L+ A DR++VGV D +T K I VD RM
Sbjct: 346 GCFDILHAGHVTYLE-QARAQGDRLIVGVNDDASVTRLKGVGRPINSVDRRM 396
>sp|Q9HUG9|HLDE_PSEAE Bifunctional protein HldE OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=hldE PE=3
SV=1
Length = 474
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 28 GTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTN-KQFAELIQPVDERM 78
G FD LH GH +L+ A DR++VGV D +T K I VD RM
Sbjct: 346 GCFDILHAGHVTYLE-QARAQGDRLIVGVNDDASVTRLKGVGRPINSVDRRM 396
>sp|Q02F21|HLDE_PSEAB Bifunctional protein HldE OS=Pseudomonas aeruginosa (strain
UCBPP-PA14) GN=hldE PE=3 SV=1
Length = 474
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 28 GTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTN-KQFAELIQPVDERM 78
G FD LH GH +L+ A DR++VGV D +T K I VD RM
Sbjct: 346 GCFDILHAGHVTYLE-QARAQGDRLIVGVNDDASVTRLKGVGRPINSVDRRM 396
>sp|Q3B146|NADD_PELLD Probable nicotinate-nucleotide adenylyltransferase OS=Pelodictyon
luteolum (strain DSM 273) GN=nadD PE=3 SV=1
Length = 194
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 24 VVLGGTFDRLHDGH-RLFLKASAELARDRIVVGVCDGPM 61
V GGTFD H+GH + L A L DRI++ V D P+
Sbjct: 4 AVFGGTFDPPHNGHLAMALFARELLPADRILISVSDNPL 42
>sp|A7MWN3|HLDE_VIBHB Bifunctional protein HldE OS=Vibrio harveyi (strain ATCC BAA-1116 /
BB120) GN=hldE PE=3 SV=1
Length = 476
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGV-CDGPMLTNKQFAELIQPVDERM 78
V+ G FD LH GH +L +AEL DR++V V D + K + P D RM
Sbjct: 343 VMTNGCFDILHAGHVSYLNHAAELG-DRLIVAVNTDESVKRLKGPGRPVNPTDRRM 397
>sp|B8GJN8|RIBL_METPE FAD synthase OS=Methanosphaerula palustris (strain ATCC BAA-1556 /
DSM 19958 / E1-9c) GN=ribL PE=3 SV=1
Length = 153
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 16/105 (15%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCD-------GPMLTNKQFAELI---QP 73
+V GTFD LH GH +L+ S +L + V+ D P++ +Q +++ +P
Sbjct: 4 IVATGTFDLLHPGHLFYLQESKKLGDELYVIVARDRNVKHKPRPIIPEEQRLQMVAALKP 63
Query: 74 VDERM----RNVEAYIKSIKPELVVQTEPITDPYGPSIVDENLEA 114
VD + ++ I++I+P+++ T + P+++ E L+A
Sbjct: 64 VDHALLGDTTDMFRPIEAIRPDVI--TLGFNQNFDPAVLTEALKA 106
>sp|Q87SJ9|HLDE_VIBPA Bifunctional protein HldE OS=Vibrio parahaemolyticus serotype O3:K6
(strain RIMD 2210633) GN=hldE PE=3 SV=1
Length = 476
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGV-CDGPMLTNKQFAELIQPVDERM 78
V+ G FD LH GH +L +AEL DR++V V D + K + P D RM
Sbjct: 343 VMTNGCFDILHAGHVSYLNHAAELG-DRLIVAVNTDESVKRLKGPGRPVNPTDRRM 397
>sp|Q58579|RIBL_METJA FAD synthase OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=ribL PE=1
SV=1
Length = 149
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCD---------GPMLTNKQFAELIQ-- 72
VV GTFD LH GH LK + L + IV+ D P++ +Q E+++
Sbjct: 5 VVTAGTFDILHPGHYEILKFAKSLGDELIVIVARDETVKKLKGRKPIIPEEQRREMVEAL 64
Query: 73 -PVDE----RMRNVEAYIKSIKPELVV----QTEPITDPYGPSIVDENLEAIVVRY 119
PVD+ ++N I +KP+++V QT + + NL +VR+
Sbjct: 65 KPVDKAILGSLKNKLEPILELKPDIIVLGPDQTTFDEETLKKELAKYNLYPEIVRF 120
>sp|C7NTR1|RIBL_HALUD FAD synthase OS=Halorhabdus utahensis (strain DSM 12940 / JCM
11049 / AX-2) GN=ribL PE=3 SV=1
Length = 142
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 16/87 (18%)
Query: 23 AVVLGGTFDRLHDGHRLFLKASAE--------LARDRIVVGVCDGPMLTNKQFAELI--- 71
VV GTFD LH GH +L+ +A LAR R V D P+L N+Q E++
Sbjct: 3 TVVAQGTFDLLHPGHLHYLREAAGMGDQLHVILAR-RENVTHKDPPILPNEQRREMVAAL 61
Query: 72 QPVDERM----RNVEAYIKSIKPELVV 94
PVDE + ++ ++ I P+L+V
Sbjct: 62 DPVDEAIVGHDDDIFIPVERIDPDLLV 88
>sp|B5FB67|HLDE_VIBFM Bifunctional protein HldE OS=Vibrio fischeri (strain MJ11) GN=hldE
PE=3 SV=1
Length = 476
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 12/61 (19%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAEL------IQPVDER 77
V+ G FD LH GH +L +AEL DR++V V TN+ L I P D R
Sbjct: 343 VMTNGCFDILHAGHVSYLNHAAELG-DRLIVAVN-----TNESVQRLKGPGRPINPTDRR 396
Query: 78 M 78
M
Sbjct: 397 M 397
>sp|Q5E2L7|HLDE_VIBF1 Bifunctional protein HldE OS=Vibrio fischeri (strain ATCC 700601 /
ES114) GN=hldE PE=3 SV=1
Length = 476
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 12/61 (19%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAEL------IQPVDER 77
V+ G FD LH GH +L +AEL DR++V V TN+ L I P D R
Sbjct: 343 VMTNGCFDILHAGHVSYLNHAAELG-DRLIVAVN-----TNESVQRLKGPGRPINPTDRR 396
Query: 78 M 78
M
Sbjct: 397 M 397
>sp|A6VDB5|HLDE_PSEA7 Bifunctional protein HldE OS=Pseudomonas aeruginosa (strain PA7)
GN=hldE PE=3 SV=1
Length = 474
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 28 GTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTN-KQFAELIQPVDERM 78
G FD LH GH +L+ A DR++VGV D +T K I VD RM
Sbjct: 346 GCFDILHAGHVTYLE-QARAQGDRLIVGVNDDASVTRLKGAGRPINSVDRRM 396
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.137 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,012,712
Number of Sequences: 539616
Number of extensions: 1685844
Number of successful extensions: 5503
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 183
Number of HSP's that attempted gapping in prelim test: 5368
Number of HSP's gapped (non-prelim): 308
length of query: 122
length of database: 191,569,459
effective HSP length: 89
effective length of query: 33
effective length of database: 143,543,635
effective search space: 4736939955
effective search space used: 4736939955
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)