Query 033313
Match_columns 122
No_of_seqs 135 out of 889
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 20:39:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033313.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033313hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ljo_A Non-specific lipid-tran 99.7 6E-18 2E-22 114.1 -0.0 78 43-121 1-93 (93)
2 2rkn_A DIR1 protein, AT5G48485 99.6 3.4E-17 1.2E-21 106.5 1.2 69 43-112 2-75 (77)
3 2alg_A Non-specific lipid tran 99.6 3.5E-17 1.2E-21 109.9 -0.7 74 44-119 2-91 (92)
4 1afh_A Maize nonspecific lipid 99.6 1.1E-16 3.7E-21 107.7 1.2 75 44-120 2-93 (93)
5 1siy_A LTP 1, NS-LTP1, nonspec 99.6 2E-16 6.8E-21 106.0 1.3 75 44-120 1-91 (91)
6 1bwo_A NS-LTP1, nonspecific li 99.6 1.8E-16 6.3E-21 106.0 -0.3 74 44-119 1-90 (90)
7 1n89_A Lipid transfer protein; 99.6 3.4E-16 1.2E-20 99.5 0.4 62 46-111 2-65 (67)
8 1l6h_A LTP2, non-specific lipi 99.5 1.7E-16 5.7E-21 101.5 -3.4 66 45-117 2-69 (69)
9 1t12_A LTP 1, nonspecific lipi 99.5 1.4E-15 4.8E-20 101.9 -0.9 74 44-120 2-91 (91)
10 1hyp_A Hydrophobic protein fro 96.0 0.0031 1E-07 41.0 2.0 63 54-118 11-79 (80)
11 3ob4_A Conglutin, maltose ABC 87.0 0.067 2.3E-06 43.6 -1.5 48 68-117 429-489 (500)
12 1s6d_A Albumin 8; all helix, f 84.9 0.46 1.6E-05 31.7 2.1 66 44-109 9-97 (103)
13 2lvf_A 2S albumin; allergen, c 84.1 0.062 2.1E-06 36.7 -2.6 57 53-109 17-101 (114)
14 2ds2_B Sweet protein mabinlin- 83.1 0.23 7.8E-06 31.2 -0.0 44 68-111 8-64 (72)
15 1hss_A 0.19 alpha-amylase inhi 80.8 0.15 5.2E-06 35.4 -1.6 62 53-114 16-108 (124)
16 1sm7_A Recombinant IB pronapin 80.5 0.29 9.8E-06 32.8 -0.3 44 68-111 46-101 (109)
17 1bea_A Bifunctional amylase/se 78.4 0.43 1.5E-05 33.2 0.1 66 53-118 16-117 (127)
18 1w2q_A Conglutin, ARA H 6; all 78.1 0.55 1.9E-05 32.6 0.5 69 43-111 13-114 (127)
19 1psy_A 2S albumin, RICC3; albu 76.7 0.37 1.3E-05 33.3 -0.7 65 44-108 16-116 (125)
20 1b1u_A Protein (alpha-amylase/ 76.0 0.18 6E-06 35.0 -2.5 62 53-114 16-111 (122)
21 1pnb_B Napin BNIB; napin IA an 31.6 12 0.00043 23.1 0.5 51 65-117 9-71 (75)
22 2kse_A Sensor protein QSEC; me 29.6 54 0.0018 21.4 3.5 9 1-9 1-9 (186)
23 1z65_A PRPLP, prion-like prote 26.1 52 0.0018 17.0 2.2 16 4-19 1-16 (30)
No 1
>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}
Probab=99.66 E-value=6e-18 Score=114.15 Aligned_cols=78 Identities=23% Similarity=0.560 Sum_probs=65.0
Q ss_pred CCCCchhhhccccCCcccccC-CCCCHhHHHHHHhc--------CccccccCCC--CCCcCCCCHHHHHHHHhhcCCCCC
Q 033313 43 PSQCNEERRLGLNACKPIVYG-QPPSPACCQRIRVQ--------HFECICPSIT--PKLASLVDINKAILLLKTCGRRVP 111 (122)
Q Consensus 43 ~~~C~~~~~~~L~pC~~yv~g-~~Ps~~CC~~vk~~--------d~~ClC~~~~--~~~~~~in~~~a~~Lp~~Cgv~~p 111 (122)
+++|+++ ...|.||++|++| ..|++.||++++++ |++|+|..+. ......||.++|..||++||+++|
T Consensus 1 AisC~~v-~~~L~pCl~Yv~g~~~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~~~~~in~~~a~~LP~~CgV~~p 79 (93)
T 2ljo_A 1 AISCGAV-TSDLSPCLTYLTGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIP 79 (93)
T ss_dssp CCSSHHH-HHHHHHHHHHHTTSSCCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGGGCTTCCHHHHHHHHHHHTCCCS
T ss_pred CCCHHHH-HHHHHhHHHHHcCCCCCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhhccCCcCHHHHHhhhHhcCCCCC
Confidence 4789998 5689999999986 57999999999995 5688888883 222235999999999999999887
Q ss_pred ----CCCCCCCccC
Q 033313 112 ----RHFKCGSLHF 121 (122)
Q Consensus 112 ----~~~~C~~~~v 121 (122)
+++||+++.|
T Consensus 80 ~~Is~~~dC~~v~~ 93 (93)
T 2ljo_A 80 YKISTTTNCNTVKF 93 (93)
T ss_dssp SCCSTTCCGGGCCC
T ss_pred CCCCCCCCCCCCCC
Confidence 9999999875
No 2
>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}
Probab=99.63 E-value=3.4e-17 Score=106.47 Aligned_cols=69 Identities=35% Similarity=0.626 Sum_probs=59.2
Q ss_pred CCCCchhhhccccCCcccccC---CCCCHhHHHHHHhcCccccccCCC-CCCcCC-CCHHHHHHHHhhcCCCCCC
Q 033313 43 PSQCNEERRLGLNACKPIVYG---QPPSPACCQRIRVQHFECICPSIT-PKLASL-VDINKAILLLKTCGRRVPR 112 (122)
Q Consensus 43 ~~~C~~~~~~~L~pC~~yv~g---~~Ps~~CC~~vk~~d~~ClC~~~~-~~~~~~-in~~~a~~Lp~~Cgv~~p~ 112 (122)
..+|+++ ...|.||++|+++ .+||++||++||+.|+.|+|.+++ +.+..+ ||+++|++||++||+++|+
T Consensus 2 ~~~C~~~-~~~L~pC~~yv~~~~~~~Ps~~CC~~lk~~~~~ClC~~~~~~~~~~~gin~~~A~~LP~~Cgv~~p~ 75 (77)
T 2rkn_A 2 IDLCGMS-QDELNECKPAVSKENPTSPSQPCCTALQHADFACLCGYKNSPWLGSFGVDPELASALPKQCGLANAP 75 (77)
T ss_dssp CCBTTBC-HHHHHHHGGGGBSSSCCCCCHHHHHHHTTCCHHHHHTTTTCHHHHHHTBCHHHHHHHHHHTTCSCCC
T ss_pred cchHHhH-HHhHhhCHHHHcCCCCCCCCHHHHHHHHhcCcCCcCcccCCcchhhcCcCHHHHHHHHHHcCCCCCC
Confidence 4679998 4579999999875 579999999999989999999995 334444 9999999999999999985
No 3
>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*
Probab=99.61 E-value=3.5e-17 Score=109.88 Aligned_cols=74 Identities=30% Similarity=0.593 Sum_probs=62.4
Q ss_pred CCCchhhhccccCCccccc-CCCCCHhHHHHHHhc--------C--ccccccCCC-CCCcCCCCHHHHHHHHhhcCCCCC
Q 033313 44 SQCNEERRLGLNACKPIVY-GQPPSPACCQRIRVQ--------H--FECICPSIT-PKLASLVDINKAILLLKTCGRRVP 111 (122)
Q Consensus 44 ~~C~~~~~~~L~pC~~yv~-g~~Ps~~CC~~vk~~--------d--~~ClC~~~~-~~~~~~in~~~a~~Lp~~Cgv~~p 111 (122)
++|+++ ...|.||++|++ |.+|+++||++||++ | ..|+|.+.. +.+. .||.++|.+||++||+++|
T Consensus 2 ~~C~~v-~~~L~pCl~y~~~~~~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~~~~~~~-~in~~~A~~LP~~Cgv~~p 79 (92)
T 2alg_A 2 ITCGQV-SSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVP-GVNPNNAAALPGKCGVSIP 79 (92)
T ss_dssp CCHHHH-HHHHGGGHHHHHHCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHST-TCCHHHHHHHHHHTTCCCS
T ss_pred CChHHH-HHhccCcHHHHcCCCCCCHHHHHHHHHHHhhhcccCCCCcCCccccCcccccC-ccChHHHHHHHHHcCCCCC
Confidence 579998 468999999987 457899999999994 3 489999863 4454 7999999999999999876
Q ss_pred ----CCCCCCCc
Q 033313 112 ----RHFKCGSL 119 (122)
Q Consensus 112 ----~~~~C~~~ 119 (122)
+++||+++
T Consensus 80 ~~is~~~dC~~v 91 (92)
T 2alg_A 80 YKISASTNCATV 91 (92)
T ss_dssp SCSSTTSCGGGC
T ss_pred CCCCCCCCCccC
Confidence 88999876
No 4
>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*
Probab=99.60 E-value=1.1e-16 Score=107.66 Aligned_cols=75 Identities=20% Similarity=0.523 Sum_probs=62.2
Q ss_pred CCCchhhhccccCCcccccC--CCCCHhHHHHHHhcC----------ccccccCCC-CCCcCCCCHHHHHHHHhhcCCCC
Q 033313 44 SQCNEERRLGLNACKPIVYG--QPPSPACCQRIRVQH----------FECICPSIT-PKLASLVDINKAILLLKTCGRRV 110 (122)
Q Consensus 44 ~~C~~~~~~~L~pC~~yv~g--~~Ps~~CC~~vk~~d----------~~ClC~~~~-~~~~~~in~~~a~~Lp~~Cgv~~ 110 (122)
++|+++ ...|.||++|++| .+|+++||++|+++. ..|+|.+.. ..+. .||.++|..||++||+++
T Consensus 2 ~~C~~v-~~~L~pCl~y~~~~~~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC~~~~~~~~~-~in~~~A~~LP~~C~v~~ 79 (93)
T 1afh_A 2 ISCGQV-ASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVS-GLNAGNAASIPSKCGVSI 79 (93)
T ss_dssp CSSHHH-HHHHGGGHHHHTTSCCSCCHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHTTST-TCCHHHHHHHHHHHHCCC
T ss_pred CChHHH-HHhccCcHHHHcCCCCCChHHHHHHHHHHHHhhcCCCCCcccCEeecccccccc-CcCHHHHHHHHHHcCCCC
Confidence 679998 5689999999985 468899999999972 489998763 4443 699999999999999987
Q ss_pred C----CCCCCCCcc
Q 033313 111 P----RHFKCGSLH 120 (122)
Q Consensus 111 p----~~~~C~~~~ 120 (122)
| +++||+++.
T Consensus 80 p~~is~~~dC~~v~ 93 (93)
T 1afh_A 80 PYTISTSTDCSRVN 93 (93)
T ss_dssp SSCCSTTCCSSSCC
T ss_pred CCCCCCCCCCccCC
Confidence 5 899999863
No 5
>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}
Probab=99.59 E-value=2e-16 Score=105.99 Aligned_cols=75 Identities=21% Similarity=0.472 Sum_probs=60.7
Q ss_pred CCCchhhhccccCCcccccC-CCCCHhHHHHHHhc--------Cc--cccccCCC-CCCcCCCCHHHHHHHHhhcCCCCC
Q 033313 44 SQCNEERRLGLNACKPIVYG-QPPSPACCQRIRVQ--------HF--ECICPSIT-PKLASLVDINKAILLLKTCGRRVP 111 (122)
Q Consensus 44 ~~C~~~~~~~L~pC~~yv~g-~~Ps~~CC~~vk~~--------d~--~ClC~~~~-~~~~~~in~~~a~~Lp~~Cgv~~p 111 (122)
++|+++ ...|.||++|++| .+|+++||++||++ |+ .|+|.... ..+. .||+++|.+||++||+++|
T Consensus 1 i~C~~v-~~~L~pCl~yv~~~~~Ps~~CC~~lk~l~~~a~t~~d~~~~ClC~k~~~~~~~-~in~~~A~~LP~~Cgv~~p 78 (91)
T 1siy_A 1 MTCGQV-QGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVR-GINPNNAEALPGKCGVNIP 78 (91)
T ss_dssp CCTTTT-HHHHHHHHHHHTSCSCCCHHHHHHHHHHHTTTCSSHHHHHHHHHHHHHTTCCS-SCCHHHHHHHHHHHTCCCS
T ss_pred CCHHHH-HHhccCcHHHHhCCCCCcHHHHHHHHHHHhhhccCCCCCcCCcccCCcccccC-CcCHHHHHHHHHHcCCCCC
Confidence 368888 4689999999975 46999999999995 43 89998432 3332 5999999999999999875
Q ss_pred ----CCCCCCCcc
Q 033313 112 ----RHFKCGSLH 120 (122)
Q Consensus 112 ----~~~~C~~~~ 120 (122)
+++||+++.
T Consensus 79 ~~is~~~dC~~v~ 91 (91)
T 1siy_A 79 YKISTSTNCNSIN 91 (91)
T ss_dssp SCSCTTSCSSTTC
T ss_pred CCCCCCCCCccCC
Confidence 899999863
No 6
>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*
Probab=99.57 E-value=1.8e-16 Score=106.00 Aligned_cols=74 Identities=22% Similarity=0.490 Sum_probs=59.9
Q ss_pred CCCchhhhccccCCcccccC-CCCCHhHHHHHHhcC----------ccccccCCC-CCCcCCCCHHHHHHHHhhcCCCCC
Q 033313 44 SQCNEERRLGLNACKPIVYG-QPPSPACCQRIRVQH----------FECICPSIT-PKLASLVDINKAILLLKTCGRRVP 111 (122)
Q Consensus 44 ~~C~~~~~~~L~pC~~yv~g-~~Ps~~CC~~vk~~d----------~~ClC~~~~-~~~~~~in~~~a~~Lp~~Cgv~~p 111 (122)
++|+++ ...|.||++|++| .+|+++||++||++. ..|+|.+.. ..+. .||.++|.+||++||+++|
T Consensus 1 i~C~~v-~~~L~pCl~y~~~~~~Ps~~CC~~lk~l~~~a~t~~dr~~~ClClk~~~~~~~-~in~~~A~~LP~~C~v~~p 78 (90)
T 1bwo_A 1 IDCGHV-DSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIH-NLNEDNARSIPPKCGVNLP 78 (90)
T ss_dssp CCHHHH-HHHHGGGHHHHTTCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHTTCT-TCCHHHHHTHHHHHTCCCS
T ss_pred CCHHHH-HHhhcccHHHHcCCCCCCHHHhHHHHHHHhhccCCCCCCccCcCccCchhccC-CcCHHHHHHHHHHcCCCCC
Confidence 368888 4689999999985 469999999999952 489997542 3343 6999999999999999876
Q ss_pred ----CCCCCCCc
Q 033313 112 ----RHFKCGSL 119 (122)
Q Consensus 112 ----~~~~C~~~ 119 (122)
+++||+++
T Consensus 79 ~~is~~~dC~~v 90 (90)
T 1bwo_A 79 YTISLNIDCSRV 90 (90)
T ss_dssp SCCCTTCCGGGC
T ss_pred CCCCCCCCCCCC
Confidence 88999864
No 7
>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*
Probab=99.56 E-value=3.4e-16 Score=99.55 Aligned_cols=62 Identities=31% Similarity=0.694 Sum_probs=53.8
Q ss_pred CchhhhccccCCccccc-CCCCCHhHHHHHHhcCccccccCC-CCCCcCCCCHHHHHHHHhhcCCCCC
Q 033313 46 CNEERRLGLNACKPIVY-GQPPSPACCQRIRVQHFECICPSI-TPKLASLVDINKAILLLKTCGRRVP 111 (122)
Q Consensus 46 C~~~~~~~L~pC~~yv~-g~~Ps~~CC~~vk~~d~~ClC~~~-~~~~~~~in~~~a~~Lp~~Cgv~~p 111 (122)
|+.. .|.||++|++ |.+||++||++||++ ..|+|+++ ++.+..+||.++|.+||++||+++|
T Consensus 2 C~~~---~L~pC~~~v~~~~~Ps~~CC~~lk~~-~~ClC~~~k~~~~~~~in~~~A~~Lp~~Cgv~~P 65 (67)
T 1n89_A 2 CQAS---QLAVCASAILSGAKPSGECCGNLRAQ-QGCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVP 65 (67)
T ss_dssp CCSS---TTHHHHHHHTTCCCCCHHHHHHHHHH-SSHHHHGGGCSTTHHHHTCHHHHHHHHHHTSCCS
T ss_pred CChh---hcccCHHHHcCCCCCCHHHHHhhCCC-CCCCCccccCcccccccCHHHHHHHHHHcCCCCC
Confidence 5554 7999999987 468999999999998 79999988 5666556999999999999999987
No 8
>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1
Probab=99.52 E-value=1.7e-16 Score=101.53 Aligned_cols=66 Identities=30% Similarity=0.726 Sum_probs=56.4
Q ss_pred CCchhhhccccCCccccc-CCCCCHhHHHHHHhcCccccccCC-CCCCcCCCCHHHHHHHHhhcCCCCCCCCCCC
Q 033313 45 QCNEERRLGLNACKPIVY-GQPPSPACCQRIRVQHFECICPSI-TPKLASLVDINKAILLLKTCGRRVPRHFKCG 117 (122)
Q Consensus 45 ~C~~~~~~~L~pC~~yv~-g~~Ps~~CC~~vk~~d~~ClC~~~-~~~~~~~in~~~a~~Lp~~Cgv~~p~~~~C~ 117 (122)
+|+.. .|.||++|++ |.+||++||++||++ ..|+|+++ ++.+..+||.++|.+||++||+++| +|+
T Consensus 2 ~C~~~---~L~pC~~~v~~~~~Ps~~CC~~lk~~-~~ClC~~~k~~~~~~~in~~~A~~Lp~~Cgv~~P---~C~ 69 (69)
T 1l6h_A 2 GCNAG---QLTVCTGAIAGGARPTAACCSSLRAQ-QGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALP---TCH 69 (69)
T ss_dssp CSTTT---THHHHHHHHTTCCSTTHHHHHHHHHH-HHHHHHHTTCSSHHHHTTTTTGGGCCCCCSSCSC---CCC
T ss_pred CCChh---hcccCHHHHcCCCCCCHHHHHhhCCC-CCCCCccccCcccccccCHHHHHHHHHHcCCCCC---CCC
Confidence 46665 7999999987 468999999999998 79999988 4666556999999999999999997 575
No 9
>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}
Probab=99.49 E-value=1.4e-15 Score=101.92 Aligned_cols=74 Identities=22% Similarity=0.536 Sum_probs=60.0
Q ss_pred CCCchhhhccccCCcccccC-CCCCHhHHHHHHhcC----------ccccccCCC-CCCcCCCCHHHHHHHHhhcCCCCC
Q 033313 44 SQCNEERRLGLNACKPIVYG-QPPSPACCQRIRVQH----------FECICPSIT-PKLASLVDINKAILLLKTCGRRVP 111 (122)
Q Consensus 44 ~~C~~~~~~~L~pC~~yv~g-~~Ps~~CC~~vk~~d----------~~ClC~~~~-~~~~~~in~~~a~~Lp~~Cgv~~p 111 (122)
++|+++ ...|.||++|++| .+|+ +||++|+++. ..|+|.... ..+. .||.++|..||++||+++|
T Consensus 2 ~~C~~v-~~~L~pCl~y~~~~~~P~-~CC~gv~~l~~~a~t~~dr~~~ClClk~~~~~~~-~in~~~A~~LP~~C~v~~p 78 (91)
T 1t12_A 2 ITCGQV-TSNLAPCLAYLRNTGPLG-RCCGGVKALVNSARTTEDRQIACTCLKSAAGAIS-GINLGKAAGLPSTCGVNIP 78 (91)
T ss_dssp CCHHHH-HHHTHHHHHHHTTSSCCT-THHHHHHHHHHTTCSTHHHHHHHHHHHHHHHHCT-TCCHHHHHHHHHHTTCCCS
T ss_pred CChHHH-HHhccCcHHHHcCCCChH-HHHHHHHHHHhhccCCCCCCccCCCccccccccC-CcChhHHHHHHHHcCCCCC
Confidence 679998 5689999999985 3477 9999999952 489997543 3343 6999999999999999876
Q ss_pred ----CCCCCCCcc
Q 033313 112 ----RHFKCGSLH 120 (122)
Q Consensus 112 ----~~~~C~~~~ 120 (122)
+++||+++.
T Consensus 79 ~~is~~~dC~~v~ 91 (91)
T 1t12_A 79 YKISPSTDCSKVQ 91 (91)
T ss_dssp SCSSSSSCCTTCC
T ss_pred CCCCCCCCCccCC
Confidence 899999863
No 10
>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1
Probab=95.98 E-value=0.0031 Score=40.99 Aligned_cols=63 Identities=27% Similarity=0.686 Sum_probs=46.3
Q ss_pred ccCCcccccCCC-CCHhHHHHHHhc-C---ccccccCCCCCCcCCCCHHHHHH-HHhhcCCCCCCCCCCCC
Q 033313 54 LNACKPIVYGQP-PSPACCQRIRVQ-H---FECICPSITPKLASLVDINKAIL-LLKTCGRRVPRHFKCGS 118 (122)
Q Consensus 54 L~pC~~yv~g~~-Ps~~CC~~vk~~-d---~~ClC~~~~~~~~~~in~~~a~~-Lp~~Cgv~~p~~~~C~~ 118 (122)
|.-|..-+.|.. |...||.-++.. | ..|+|..+.. +. .+|.+-+.+ |...||...|++|+|..
T Consensus 11 LgvCanvL~g~~~~~~~CC~Ll~GL~dleAAvCLCtaik~-Lg-ilnlpv~L~llln~Cgk~~P~gF~C~~ 79 (80)
T 1hyp_A 11 LSICLNILGGSLGTVDDCCALIGGLGDIEAIVCLCIQLRA-LG-ILNLNRNLQLILNSCGRSYPSNATCPR 79 (80)
T ss_dssp CGGGGGGGGTCCTTHHHHHHHHHTSCHHHHHHHHHHHHHH-HT-CSCHHHHHHHHHHHTTCSSCCCCCCSC
T ss_pred hhHHHHHhCcCCCCCCccchhhhCcchhhhhhhhhhhccc-cc-eeecChhHHHHHHHhCCcCcCCCCCCC
Confidence 667877765543 678899999995 2 3999988752 22 257665665 55789999999999963
No 11
>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}
Probab=87.03 E-value=0.067 Score=43.59 Aligned_cols=48 Identities=21% Similarity=0.562 Sum_probs=34.2
Q ss_pred HhHHHHHHhcC--ccccccCCCCCCc-------C---C-CCHHHHHHHHhhcCCCCCCCCCCC
Q 033313 68 PACCQRIRVQH--FECICPSITPKLA-------S---L-VDINKAILLLKTCGRRVPRHFKCG 117 (122)
Q Consensus 68 ~~CC~~vk~~d--~~ClC~~~~~~~~-------~---~-in~~~a~~Lp~~Cgv~~p~~~~C~ 117 (122)
.+||+.++..+ +.|.|..+...+. . . .=..+|..||..||+..|. .|.
T Consensus 429 ~~cc~~l~~~~~~~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~c~~~~~~--~c~ 489 (500)
T 3ob4_A 429 ERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAPQ--RCD 489 (500)
T ss_dssp HHHHHHHGGGTTCHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHHHTHHHHTTCCCCS--CCC
T ss_pred HHHHHHHHhCCcccccccHHHHHHHHHHHHHhhhHHHHHHHHHHHhhCchhcCCCCCc--cCC
Confidence 68999999997 7999988721111 0 0 1145699999999998663 565
No 12
>1s6d_A Albumin 8; all helix, folded LEAF, right-handed superhelix, disulphide rich, plant protein; NMR {Helianthus annuus} SCOP: a.52.1.3
Probab=84.90 E-value=0.46 Score=31.71 Aligned_cols=66 Identities=21% Similarity=0.407 Sum_probs=45.8
Q ss_pred CCCchhhh-cc-ccCCccccc-C---C----------CCCHhHHHHHHhcCccccccCCCCC----CcCC---CCHHHHH
Q 033313 44 SQCNEERR-LG-LNACKPIVY-G---Q----------PPSPACCQRIRVQHFECICPSITPK----LASL---VDINKAI 100 (122)
Q Consensus 44 ~~C~~~~~-~~-L~pC~~yv~-g---~----------~Ps~~CC~~vk~~d~~ClC~~~~~~----~~~~---in~~~a~ 100 (122)
..|...+. .. |.+|..|+. . . ..-..||+.++.++..|.|..+... +..- -...+|.
T Consensus 9 q~C~qq~q~~q~L~~Cq~yv~qq~~~~~~~~~~~~~e~~~qqCC~qL~~~~~~CrC~al~~~~Q~q~~g~q~~~~~q~A~ 88 (103)
T 1s6d_A 9 SGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAH 88 (103)
T ss_dssp SSHHHHHHHTCSTTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHSCGGGSSHHHHHHTTSTTCSSTHHHHHHHHH
T ss_pred cccHHHHHhChhHHHHHHHHHHHhhccCCcccccccHHHHHHHHHHHHhcCcccCcHHHHHHHHHHhcchhHHHHHHHHH
Confidence 45776632 24 888999875 1 1 1247899999999999999998211 1110 2356789
Q ss_pred HHHhhcCCC
Q 033313 101 LLLKTCGRR 109 (122)
Q Consensus 101 ~Lp~~Cgv~ 109 (122)
+||..||++
T Consensus 89 ~LP~~C~i~ 97 (103)
T 1s6d_A 89 NLPIECNLM 97 (103)
T ss_dssp HHHHHTTSS
T ss_pred hcHHhcCCC
Confidence 999999995
No 13
>2lvf_A 2S albumin; allergen, copper binding, hydrophobic interaction; NMR {Bertholletia excelsa}
Probab=84.08 E-value=0.062 Score=36.69 Aligned_cols=57 Identities=16% Similarity=0.339 Sum_probs=39.1
Q ss_pred cccCCccccc----C-C---CCC-------HhHHHHHHhcCccccccCCCCC----------CcCC-C--CHHHHHHHHh
Q 033313 53 GLNACKPIVY----G-Q---PPS-------PACCQRIRVQHFECICPSITPK----------LASL-V--DINKAILLLK 104 (122)
Q Consensus 53 ~L~pC~~yv~----g-~---~Ps-------~~CC~~vk~~d~~ClC~~~~~~----------~~~~-i--n~~~a~~Lp~ 104 (122)
.|..|..|+. + . .+. ..||+.++.+|..|.|..+... +... + =+..|.+||+
T Consensus 17 ~L~~Cq~yv~qq~~~~~~~~~~~~~~~~~l~~CC~qL~qv~~~CrC~aL~~~v~~~~qq~~~~~~~~~~~~~q~A~~LP~ 96 (114)
T 2lvf_A 17 MLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGMDESCRCEGLRMMMRMMQQKEMQPRGEQMRRMMRLAENIPS 96 (114)
T ss_dssp HHHHHHHHHHHHHHTTTTCSCCSSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHHHHCCcCccCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhChH
Confidence 4788888864 1 1 111 3599999999999999987210 1100 1 1467999999
Q ss_pred hcCCC
Q 033313 105 TCGRR 109 (122)
Q Consensus 105 ~Cgv~ 109 (122)
.||+.
T Consensus 97 ~C~i~ 101 (114)
T 2lvf_A 97 RCNLS 101 (114)
T ss_dssp HHCCC
T ss_pred hcCCC
Confidence 99997
No 14
>2ds2_B Sweet protein mabinlin-2 chain B; plant protein, SEED storage protein; 1.70A {Capparis masaikai}
Probab=83.10 E-value=0.23 Score=31.20 Aligned_cols=44 Identities=20% Similarity=0.433 Sum_probs=32.8
Q ss_pred HhHHHHHHhcCccccccCCCCCC----------cC---CCCHHHHHHHHhhcCCCCC
Q 033313 68 PACCQRIRVQHFECICPSITPKL----------AS---LVDINKAILLLKTCGRRVP 111 (122)
Q Consensus 68 ~~CC~~vk~~d~~ClC~~~~~~~----------~~---~in~~~a~~Lp~~Cgv~~p 111 (122)
..||+.++..+..|.|..+...+ .. .=.+.+|..||..||+..|
T Consensus 8 qqCC~eL~~~~~~CrC~aL~~~~~~~~qqgq~~~~qq~~~~~q~a~~LP~~C~l~~~ 64 (72)
T 2ds2_B 8 RQCCNQLRQVDRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNI 64 (72)
T ss_dssp HHHHHHHTTSCGGGHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCTTC
T ss_pred HHHHHHHHhcCccccCHHHHHHHHHHHHhhhhhchHHHHHHHHHHHhhHHhcCCCCC
Confidence 57999999999999999982111 00 0236789999999999643
No 15
>1hss_A 0.19 alpha-amylase inhibitor; cereal inhibitor, animal amylase; 2.06A {Triticum aestivum} SCOP: a.52.1.2
Probab=80.80 E-value=0.15 Score=35.42 Aligned_cols=62 Identities=26% Similarity=0.474 Sum_probs=41.2
Q ss_pred cccCCccccc----C-CCC---CHhHHHHHHhcCccccccCCCCCC----------------cCC------CCHHHHHHH
Q 033313 53 GLNACKPIVY----G-QPP---SPACCQRIRVQHFECICPSITPKL----------------ASL------VDINKAILL 102 (122)
Q Consensus 53 ~L~pC~~yv~----g-~~P---s~~CC~~vk~~d~~ClC~~~~~~~----------------~~~------in~~~a~~L 102 (122)
.|..|..|+. | ..| ...||+.++.++..|.|..+...+ ..+ +-...|..|
T Consensus 16 pL~~Cr~Yv~~~C~g~~~p~~~~~~CC~QL~~i~~~CRC~ALr~m~~~~~~~~g~~~g~~~~e~~pgCrre~~~~~A~~L 95 (124)
T 1hss_A 16 ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEHGAQEGQAGTGAFPRCRREVVKLTAASI 95 (124)
T ss_dssp CCTTHHHHHHHHTTTCCCCHHHHHHHHHHHHTSCTTTHHHHHHHHHHHHHHHC---------CCSTTCCHHHHHHHHTTH
T ss_pred cchHHHHHHHHHccCCCCcHHHHHHHHHHHHhcCcccchHHHHHHHHhhhhhhhhhccccchhhccCCcHHHHHHHHHhc
Confidence 3667777764 2 223 356999999999999998872111 000 111258889
Q ss_pred HhhcCCCCC-CCC
Q 033313 103 LKTCGRRVP-RHF 114 (122)
Q Consensus 103 p~~Cgv~~p-~~~ 114 (122)
|..||++.+ .+.
T Consensus 96 P~~Cnl~~~~~g~ 108 (124)
T 1hss_A 96 TAVCRLPIVVDAS 108 (124)
T ss_dssp HHHTTCCEECSTT
T ss_pred hhhcCCCCCCCCC
Confidence 999999987 554
No 16
>1sm7_A Recombinant IB pronapin; all alpha-helix, right-handed superhelix, plant protein; NMR {Brassica napus}
Probab=80.53 E-value=0.29 Score=32.81 Aligned_cols=44 Identities=18% Similarity=0.454 Sum_probs=31.9
Q ss_pred HhHHHHHHhcCccccccCCCCCC----cC-----C---CCHHHHHHHHhhcCCCCC
Q 033313 68 PACCQRIRVQHFECICPSITPKL----AS-----L---VDINKAILLLKTCGRRVP 111 (122)
Q Consensus 68 ~~CC~~vk~~d~~ClC~~~~~~~----~~-----~---in~~~a~~Lp~~Cgv~~p 111 (122)
..||+.++.++..|.|..+...+ .. . -....|..||..||+..+
T Consensus 46 qqCC~qL~~v~~qCrC~al~~~v~~~~~qgq~~~~~~~~~~~~a~~LP~~Cnl~~~ 101 (109)
T 1sm7_A 46 EQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQI 101 (109)
T ss_dssp HHHHHHTTTTCHHHHTTTTHHHHHTSSCSSCCCTTHHHHHHHTTSSHHHHSCCCSS
T ss_pred HHHHHHHHhcCccCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHhCHHhcCCCCC
Confidence 57999999999999999983111 00 0 134557889999999754
No 17
>1bea_A Bifunctional amylase/serine protease inhibitor; amylase/protease bifunctional inhibitor; 1.95A {Zea mays} SCOP: a.52.1.2 PDB: 1bfa_A
Probab=78.45 E-value=0.43 Score=33.20 Aligned_cols=66 Identities=20% Similarity=0.383 Sum_probs=43.4
Q ss_pred cccCCccccc----C---CCC----CHhHHHHHHhcCccccccCCC----CCCc--------C---CC-------CHHHH
Q 033313 53 GLNACKPIVY----G---QPP----SPACCQRIRVQHFECICPSIT----PKLA--------S---LV-------DINKA 99 (122)
Q Consensus 53 ~L~pC~~yv~----g---~~P----s~~CC~~vk~~d~~ClC~~~~----~~~~--------~---~i-------n~~~a 99 (122)
.|..|..|+. | ..| ...||+.+..++..|.|..+. ..+. . .. -...|
T Consensus 16 pL~~CR~Yv~~q~C~~g~~~p~e~~~~~CC~QL~~i~~~CRC~ALr~m~~~~~~~~~~~~~~G~~~~~pgC~re~~~~~A 95 (127)
T 1bea_A 16 PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFA 95 (127)
T ss_dssp CCHHHHHHHHHHHHSCCCSSCHHHHHHHHHHHHHTSCGGGHHHHHHHHHHCBCCCSSSCCCBCCCCCBTTBCHHHHHHHH
T ss_pred cchHHHHHHHHhhcccCCCCchHHHHHHHHHHHHhcCcccchHHHHHHHHhhhcccccccccccccccCCCcHHHHHHHH
Confidence 3667888863 2 123 345999999999999998871 1110 0 01 13458
Q ss_pred HHH--HhhcCCCCCCCC-CCCC
Q 033313 100 ILL--LKTCGRRVPRHF-KCGS 118 (122)
Q Consensus 100 ~~L--p~~Cgv~~p~~~-~C~~ 118 (122)
..| |..||++.++|. .|.-
T Consensus 96 ~~Lv~P~~Cnl~~~~g~~~C~~ 117 (127)
T 1bea_A 96 ATLVTEAECNLATISGVAECPW 117 (127)
T ss_dssp TTTTSTTTTCCCCTTSSSCCTT
T ss_pred HhcCCcccCCCCCCCCCCCCCc
Confidence 889 999999887544 5643
No 18
>1w2q_A Conglutin, ARA H 6; allergen, allergene; NMR {Arachis hypogaea}
Probab=78.08 E-value=0.55 Score=32.56 Aligned_cols=69 Identities=19% Similarity=0.520 Sum_probs=46.7
Q ss_pred CCCCchhhh-ccccCCccccc-C---C--C--C-----------CHhHHHHHHhc--CccccccCCCCC-------CcC-
Q 033313 43 PSQCNEERR-LGLNACKPIVY-G---Q--P--P-----------SPACCQRIRVQ--HFECICPSITPK-------LAS- 92 (122)
Q Consensus 43 ~~~C~~~~~-~~L~pC~~yv~-g---~--~--P-----------s~~CC~~vk~~--d~~ClC~~~~~~-------~~~- 92 (122)
...|...+. ..|.+|..|+. . . . + -..||+.++.+ +..|.|..+... +..
T Consensus 13 ~qqC~qq~q~~qL~~Cq~yl~q~~~~~~~~~~~~~~~~~~~e~~lqqCC~qL~q~~~~~qCrCeaL~q~~Q~qq~q~~gq 92 (127)
T 1w2q_A 13 SSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDR 92 (127)
T ss_dssp TCCHHHHHTTCCCHHHHHHHHTGGGSSSSSCSCCCTTSCCHHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHSCTTTTTS
T ss_pred ccccHHHHHHhhHHHHHHHHHHHHhhccCCccchhhcccccHHHHHHHHHHHHhhccCCCccCHHHHHHHHHHHhhhhhH
Confidence 356877632 35899999874 1 1 1 1 25799999999 999999988211 111
Q ss_pred CCC---HHHHHHHHhhcCCCCC
Q 033313 93 LVD---INKAILLLKTCGRRVP 111 (122)
Q Consensus 93 ~in---~~~a~~Lp~~Cgv~~p 111 (122)
-.. +.+|..||..||++-|
T Consensus 93 q~~~~~~q~A~~LP~~C~i~~~ 114 (127)
T 1w2q_A 93 QMVQQFKRELMSLPQQCNFRAP 114 (127)
T ss_dssp TTHHHHHHHHHHHHHHHTCCCS
T ss_pred HHHHHHHHHHHHhHHhcCCCCC
Confidence 122 4679999999999533
No 19
>1psy_A 2S albumin, RICC3; albumin SEED protein, SEED storage protein, plant protein; NMR {Ricinus communis} SCOP: a.52.1.3
Probab=76.65 E-value=0.37 Score=33.28 Aligned_cols=65 Identities=23% Similarity=0.495 Sum_probs=45.5
Q ss_pred CCCchhhh-ccccCCcccccC-----C-------CC-----------CHhHHHHHHhcCccccccCCCCCC---------
Q 033313 44 SQCNEERR-LGLNACKPIVYG-----Q-------PP-----------SPACCQRIRVQHFECICPSITPKL--------- 90 (122)
Q Consensus 44 ~~C~~~~~-~~L~pC~~yv~g-----~-------~P-----------s~~CC~~vk~~d~~ClC~~~~~~~--------- 90 (122)
..|...+. ..|.+|..|+.- . .| -..||+.++..+..|.|..+...+
T Consensus 16 q~C~~e~qq~~L~~Cq~yv~qq~~~~~~~~~~~~~~~~e~~~qe~~~~qqCC~qL~~~~~~C~C~aL~~~v~~~~qQgq~ 95 (125)
T 1psy_A 16 QQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQVRDECQCEAIKYIAEDQIQQGQL 95 (125)
T ss_dssp SSHHHHHTTSTTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTCCSSHHHHHHHHHHHHHHHHTTC
T ss_pred cccHHHHHHhhHHHHHHHHHHHHhcccCcchhhhcchhhcccccHHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHhhh
Confidence 46887743 268999999741 1 13 257999999999999999982111
Q ss_pred c-CCC--CHHHHHHHHhhcCC
Q 033313 91 A-SLV--DINKAILLLKTCGR 108 (122)
Q Consensus 91 ~-~~i--n~~~a~~Lp~~Cgv 108 (122)
. .-+ -+.+|.+||..||+
T Consensus 96 ~gqq~~~~~q~A~~LP~~C~i 116 (125)
T 1psy_A 96 HGEESERVAQRAGEIVSSCGV 116 (125)
T ss_dssp CTTCSHHHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHHhhHHHcCC
Confidence 1 111 25779999999999
No 20
>1b1u_A Protein (alpha-amylase/trypsin inhibitor RATI); bifunctional, hydrolase inhibitor; 2.20A {Eleusine coracana} SCOP: a.52.1.2 PDB: 1bip_A 1tmq_B
Probab=76.04 E-value=0.18 Score=34.95 Aligned_cols=62 Identities=18% Similarity=0.290 Sum_probs=41.6
Q ss_pred cccCCccccc----CC---CC----CHhHHHHHHhcCccccccCCC----CCCc----------CCC-------CHHHHH
Q 033313 53 GLNACKPIVY----GQ---PP----SPACCQRIRVQHFECICPSIT----PKLA----------SLV-------DINKAI 100 (122)
Q Consensus 53 ~L~pC~~yv~----g~---~P----s~~CC~~vk~~d~~ClC~~~~----~~~~----------~~i-------n~~~a~ 100 (122)
.|..|..|+. +. .| ...||+.++.++..|.|..+. ..+. ... -...|.
T Consensus 16 ~L~~Cr~Yv~~q~C~~g~~~p~~~~~~~CC~QL~~i~~~CRC~ALr~m~~~~~~~~g~~~g~~~~~~pgC~re~~~~~A~ 95 (122)
T 1b1u_A 16 PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAP 95 (122)
T ss_dssp TTTHHHHHHHHHHHCCCCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHTCEECTTSCEECCCCCCCTTCCHHHHHHHGG
T ss_pred cchHHHHHHHHhcccCCCCCchHHHHHHHHHHHHhCCccccHHHHHHHHHhhhhhhcccccccchhccCCcHHHHHHHHH
Confidence 3667888863 21 23 346999999999999998871 1110 111 113578
Q ss_pred HH--HhhcCCCCCCCC
Q 033313 101 LL--LKTCGRRVPRHF 114 (122)
Q Consensus 101 ~L--p~~Cgv~~p~~~ 114 (122)
.| |..||++.++|+
T Consensus 96 ~Lv~P~~Cnl~~~~g~ 111 (122)
T 1b1u_A 96 KLVTEVECNLATIHGG 111 (122)
T ss_dssp GTTSTTTTCCCCTTSS
T ss_pred hcCCcccCCCCCCCCC
Confidence 89 999999987654
No 21
>1pnb_B Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3
Probab=31.65 E-value=12 Score=23.08 Aligned_cols=51 Identities=18% Similarity=0.374 Sum_probs=36.0
Q ss_pred CCCHhHHHHHHhcCccccccCCCCC---------CcCC---CCHHHHHHHHhhcCCCCCCCCCCC
Q 033313 65 PPSPACCQRIRVQHFECICPSITPK---------LASL---VDINKAILLLKTCGRRVPRHFKCG 117 (122)
Q Consensus 65 ~Ps~~CC~~vk~~d~~ClC~~~~~~---------~~~~---in~~~a~~Lp~~Cgv~~p~~~~C~ 117 (122)
..-..||+.++..+..|.|..+... +..- -....|..||..||++.+ ..|.
T Consensus 9 ~~~qqCC~qL~~~~~~CrC~aL~~~~~~~~~qgq~~~~q~~~~~q~a~~LP~~Cnl~~~--~~C~ 71 (75)
T 1pnb_B 9 WLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQI--GTCP 71 (75)
T ss_dssp SCTHHHHHHHHTSCGGGSHHHHHHHHHHHHSGGGCSSCCHHHHHHHCCSCSCSSCCTTT--CCCC
T ss_pred HHHHHHHHHHHhCCcccccHHHHHHHHHHHHHcccchHHHHHHHHHHHhhHHhcCCCCC--CCCC
Confidence 3457899999999999999988211 1111 135678889999999754 3454
No 22
>2kse_A Sensor protein QSEC; methods development, histidine kinase receptor, membrane domain, two-helical hairpin, cell-free synthesis, ATP- binding; NMR {Escherichia coli}
Probab=29.59 E-value=54 Score=21.35 Aligned_cols=9 Identities=33% Similarity=0.597 Sum_probs=5.9
Q ss_pred CCccccccc
Q 033313 1 MGSMKKKNS 9 (122)
Q Consensus 1 ~~~~~~~~~ 9 (122)
||.|++..|
T Consensus 1 ~~~m~~~~S 9 (186)
T 2kse_A 1 MGKFTQRLS 9 (186)
T ss_dssp CCSTTTCSS
T ss_pred CCCCCCccc
Confidence 677876543
No 23
>1z65_A PRPLP, prion-like protein doppel, doppelganger; transmembrane helix, DHPC, mouse doppel, unknown function; NMR {Synthetic}
Probab=26.11 E-value=52 Score=17.02 Aligned_cols=16 Identities=25% Similarity=0.476 Sum_probs=9.6
Q ss_pred cccccchhhHHHHHHH
Q 033313 4 MKKKNSRWSSFIMSRV 19 (122)
Q Consensus 4 ~~~~~~~~~~~~~~~l 19 (122)
|+|.-.-|.++++++|
T Consensus 1 MrkhLG~~wlai~c~L 16 (30)
T 1z65_A 1 MKNRLGTWWVAILCML 16 (30)
T ss_dssp CCSSCSSHHHHHHHHH
T ss_pred CcchhhhhHHHHHHHH
Confidence 6666666665555544
Done!