Query 033314
Match_columns 122
No_of_seqs 116 out of 438
Neff 4.9
Searched_HMMs 46136
Date Fri Mar 29 12:24:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033314.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/033314hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF02681 DUF212: Divergent PAP 100.0 4E-56 8.6E-61 332.3 7.5 114 2-115 25-141 (141)
2 COG1963 Uncharacterized protei 100.0 1.6E-51 3.5E-56 308.7 7.2 119 2-120 31-149 (153)
3 cd03383 PAP2_diacylglycerolkin 99.4 6.1E-13 1.3E-17 95.2 7.9 69 17-120 38-107 (109)
4 cd03394 PAP2_like_5 PAP2_like_ 99.3 1.7E-11 3.7E-16 85.5 6.9 70 15-119 36-106 (106)
5 PRK09597 lipid A 1-phosphatase 99.2 6.1E-11 1.3E-15 92.8 8.2 68 17-120 118-186 (190)
6 cd03385 PAP2_BcrC_like PAP2_li 99.2 1.1E-10 2.3E-15 85.3 8.2 69 16-120 75-144 (144)
7 cd03382 PAP2_dolichyldiphospha 99.2 1.3E-10 2.9E-15 86.8 8.0 70 16-119 79-159 (159)
8 cd03393 PAP2_like_3 PAP2_like_ 99.1 1.7E-10 3.8E-15 82.4 7.6 68 16-118 56-124 (125)
9 cd03391 PAP2_containing_2_like 99.1 1.1E-10 2.4E-15 87.5 6.8 68 17-118 90-158 (159)
10 KOG3146 Dolichyl pyrophosphate 99.1 1.1E-10 2.4E-15 93.1 6.9 73 14-120 91-174 (228)
11 cd03388 PAP2_SPPase1 PAP2_like 99.1 2.2E-10 4.8E-15 84.5 7.9 69 16-118 76-150 (151)
12 cd03395 PAP2_like_4 PAP2_like_ 99.1 4.3E-10 9.3E-15 84.5 7.7 68 17-119 103-171 (177)
13 COG0671 PgpB Membrane-associat 99.1 4.6E-10 1E-14 81.4 7.2 70 16-119 132-208 (232)
14 cd01610 PAP2_like PAP2_like pr 99.0 2.2E-09 4.8E-14 72.6 7.5 69 16-118 49-121 (122)
15 PRK10699 phosphatidylglyceroph 99.0 1.7E-09 3.6E-14 87.3 7.8 70 16-119 155-227 (244)
16 cd03390 PAP2_containing_1_like 99.0 1.3E-09 2.8E-14 83.2 6.6 69 18-120 110-191 (193)
17 PLN02525 phosphatidic acid pho 99.0 1.5E-09 3.3E-14 91.3 7.6 69 17-119 83-161 (352)
18 cd03389 PAP2_lipid_A_1_phospha 99.0 2.8E-09 6.2E-14 81.3 8.2 67 17-120 117-184 (186)
19 PF01569 PAP2: PAP2 superfamil 99.0 4.4E-09 9.5E-14 72.9 8.2 70 17-120 48-122 (129)
20 cd03384 PAP2_wunen PAP2, wunen 99.0 2.6E-09 5.6E-14 79.3 7.5 68 17-118 71-149 (150)
21 cd03392 PAP2_like_2 PAP2_like_ 99.0 3.7E-09 8E-14 79.2 8.1 70 16-119 99-176 (182)
22 cd03381 PAP2_glucose_6_phospha 98.9 6.1E-09 1.3E-13 83.5 7.4 69 17-119 71-151 (235)
23 PRK11837 undecaprenyl pyrophos 98.9 9.1E-09 2E-13 80.2 7.9 67 16-118 101-168 (202)
24 smart00014 acidPPc Acid phosph 98.7 5.8E-08 1.3E-12 67.6 7.6 69 16-118 43-115 (116)
25 cd03396 PAP2_like_6 PAP2_like_ 98.7 6.7E-08 1.4E-12 74.1 8.1 71 16-120 120-195 (197)
26 PLN02731 Putative lipid phosph 98.7 6.2E-08 1.3E-12 81.3 7.8 68 19-120 180-260 (333)
27 PLN02250 lipid phosphate phosp 98.6 1E-07 2.2E-12 79.4 7.6 69 18-120 161-242 (314)
28 PLN02715 lipid phosphate phosp 98.6 1.6E-07 3.4E-12 78.7 7.3 69 18-120 185-266 (327)
29 cd03397 PAP2_acid_phosphatase 98.5 3.8E-07 8.2E-12 72.3 8.0 69 15-120 147-216 (232)
30 cd03380 PAP2_like_1 PAP2_like_ 98.5 5.5E-07 1.2E-11 69.3 8.4 66 16-118 141-207 (209)
31 KOG2822 Sphingoid base-phospha 98.4 3.3E-07 7.2E-12 78.4 5.8 71 15-119 154-233 (407)
32 cd03386 PAP2_Aur1_like PAP2_li 98.4 1.2E-06 2.6E-11 66.5 7.5 70 15-120 114-184 (186)
33 cd03398 PAP2_haloperoxidase PA 98.4 2.6E-06 5.7E-11 67.1 9.0 69 16-118 143-230 (232)
34 KOG3030 Lipid phosphate phosph 97.8 7.3E-05 1.6E-09 62.5 7.1 69 19-120 180-259 (317)
35 KOG4268 Uncharacterized conser 97.6 0.00022 4.7E-09 55.5 6.8 68 16-117 106-175 (189)
36 PF14378 PAP2_3: PAP2 superfam 97.0 0.0023 5E-08 48.4 6.3 61 19-114 127-188 (191)
37 COG4129 Predicted membrane pro 89.6 0.39 8.4E-06 40.6 3.5 66 19-119 10-75 (332)
38 PF14360 PAP2_C: PAP2 superfam 82.6 4.9 0.00011 26.6 5.3 18 98-115 52-69 (74)
39 PF01219 DAGK_prokar: Prokaryo 75.1 12 0.00025 26.6 5.6 44 27-82 23-66 (104)
40 COG4803 Predicted membrane pro 65.3 4.5 9.8E-05 31.4 1.9 31 90-120 48-78 (170)
41 TIGR00827 EIIC-GAT PTS system, 62.5 8.9 0.00019 33.5 3.4 48 71-118 183-231 (407)
42 PF10066 DUF2304: Uncharacteri 56.0 12 0.00027 26.4 2.7 52 27-82 52-103 (115)
43 PF06081 DUF939: Bacterial pro 55.7 16 0.00035 26.7 3.3 36 22-59 7-42 (141)
44 PF10261 Scs3p: Inositol phosp 55.1 8 0.00017 30.9 1.7 21 99-119 218-238 (238)
45 PF04632 FUSC: Fusaric acid re 53.4 27 0.00059 30.6 4.9 21 99-119 130-150 (650)
46 PF03611 EIIC-GAT: PTS system 52.8 18 0.0004 31.3 3.7 48 71-120 187-238 (415)
47 TIGR02005 PTS-IIBC-alpha PTS s 47.6 1.2E+02 0.0026 27.3 8.1 82 24-119 64-154 (524)
48 PF11522 Pik1: Yeast phosphati 46.9 24 0.00053 22.4 2.6 39 72-112 9-49 (51)
49 PF00916 Sulfate_transp: Sulfa 42.3 19 0.0004 28.2 2.0 26 17-42 198-223 (280)
50 COG0472 Rfe UDP-N-acetylmuramy 40.9 1.3E+02 0.0028 25.1 6.9 25 98-122 186-210 (319)
51 PF10389 CoatB: Bacteriophage 39.3 33 0.00072 21.3 2.4 22 99-120 19-40 (46)
52 COG5336 Uncharacterized protei 36.8 37 0.00081 25.0 2.7 18 101-118 49-66 (116)
53 PF04632 FUSC: Fusaric acid re 35.9 1.3E+02 0.0029 26.3 6.4 21 99-119 387-407 (650)
54 TIGR00815 sulP high affinity s 35.2 23 0.0005 31.3 1.7 22 17-38 310-331 (563)
55 KOG4692 Predicted E3 ubiquitin 34.9 81 0.0017 27.9 4.8 55 60-118 264-324 (489)
56 COG1289 Predicted membrane pro 33.6 1.3E+02 0.0029 27.2 6.2 31 25-57 361-391 (674)
57 PF05525 Branch_AA_trans: Bran 33.3 1.7E+02 0.0037 25.6 6.6 31 29-59 178-208 (427)
58 PRK11660 putative transporter; 30.9 55 0.0012 29.0 3.3 19 17-35 330-348 (568)
59 COG4575 ElaB Uncharacterized c 30.7 43 0.00094 24.2 2.2 26 94-119 76-102 (104)
60 COG3775 GatC Phosphotransferas 30.5 49 0.0011 29.4 2.9 46 73-118 195-241 (446)
61 PRK14654 mraY phospho-N-acetyl 28.6 3.1E+02 0.0068 22.7 7.2 24 98-121 176-199 (302)
62 PF14362 DUF4407: Domain of un 26.6 3.4E+02 0.0073 21.8 8.3 34 26-59 26-63 (301)
63 PF04284 DUF441: Protein of un 26.5 54 0.0012 24.8 2.1 19 102-120 105-123 (140)
64 COG3004 NhaA Na+/H+ antiporter 25.2 2.6E+02 0.0057 24.5 6.3 46 20-65 151-207 (390)
65 PF11654 DUF2665: Protein of u 24.8 74 0.0016 19.9 2.2 19 41-59 6-24 (47)
66 PF11833 DUF3353: Protein of u 24.4 3.4E+02 0.0075 21.1 6.9 23 96-118 138-160 (194)
67 PRK11427 multidrug efflux syst 23.9 2.6E+02 0.0056 26.3 6.4 16 102-117 399-414 (683)
68 PF01034 Syndecan: Syndecan do 23.9 26 0.00057 23.3 0.0 13 104-116 14-26 (64)
69 TIGR00844 c_cpa1 na(+)/h(+) an 23.6 2.6E+02 0.0057 26.8 6.4 20 99-118 207-226 (810)
70 PF04286 DUF445: Protein of un 23.1 58 0.0013 26.0 1.9 15 105-119 347-361 (367)
71 PRK10631 p-hydroxybenzoic acid 22.4 2.5E+02 0.0054 26.1 5.9 31 25-57 15-45 (652)
72 PF10779 XhlA: Haemolysin XhlA 22.2 91 0.002 20.2 2.4 15 104-118 56-70 (71)
73 PF09527 ATPase_gene1: Putativ 21.6 1.1E+02 0.0024 18.6 2.5 24 94-117 25-48 (55)
74 COG1114 BrnQ Branched-chain am 21.4 1.2E+02 0.0027 26.9 3.7 44 14-57 165-208 (431)
75 PRK03557 zinc transporter ZitB 21.4 2.4E+02 0.0051 23.0 5.2 32 37-68 178-209 (312)
76 PF09600 Cyd_oper_YbgE: Cyd op 21.1 1.6E+02 0.0034 20.2 3.4 15 45-59 6-20 (82)
77 PRK14405 membrane protein; Pro 20.5 4.3E+02 0.0092 20.7 7.3 50 22-81 141-191 (202)
78 PRK07373 DNA polymerase III su 20.1 1.3E+02 0.0029 26.4 3.6 35 13-47 31-65 (449)
79 PF13544 N_methyl_2: Type IV p 20.1 1.2E+02 0.0027 16.8 2.3 21 94-114 11-31 (31)
No 1
>PF02681 DUF212: Divergent PAP2 family; InterPro: IPR003832 This family is related to the acid phosphatase/vanadium-dependent haloperoxidases; members of this group are uncharacterised.
Probab=100.00 E-value=4e-56 Score=332.31 Aligned_cols=114 Identities=62% Similarity=0.927 Sum_probs=107.2
Q ss_pred cccccccccccccccccCCCchHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhC
Q 033314 2 LRYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEF 81 (122)
Q Consensus 2 ~~~~~r~~~~~~~~~~GGMPSSHSA~v~alat~i~l~~G~~s~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~ 81 (122)
+++++|+|||++++++|||||||||+|+||||++|+.+|++||+|+++++||+||||||+||||++||||++||+|++++
T Consensus 25 ~~~~~r~~d~~~~~~sGGMPSSHSA~V~aLat~ig~~~G~~S~~FAia~v~a~IVmyDA~GVRr~aG~qA~~lN~l~~~~ 104 (141)
T PF02681_consen 25 NYLKERKWDWRRFFSSGGMPSSHSATVSALATAIGLQEGFDSPLFAIAAVFALIVMYDAMGVRRAAGKQAKVLNQLIEEL 104 (141)
T ss_pred HHHHhCcccHHHHhhcCCCCchHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHhheeehHHHHHHHHHHHHHHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC---CCCCCCCccccCCCChHHHHHHHHHHHHHH
Q 033314 82 PPDH---PLSSVRPLRELLGHTPLQVVAGGILGCVVA 115 (122)
Q Consensus 82 ~~~~---~~~~~~~lke~lGHtp~EV~~GallGi~ia 115 (122)
++.+ +...+++|||.+||||.||++|+++|+++|
T Consensus 105 ~~~~~~~~~~~~~~LKE~lGHtp~EV~~G~llGi~vA 141 (141)
T PF02681_consen 105 EEEHQSEPPIQEKKLKELLGHTPLEVFAGALLGIVVA 141 (141)
T ss_pred HhhhccccchhhhcccccCCCCHHHHHHHHHHHHhhC
Confidence 7665 334457899999999999999999999975
No 2
>COG1963 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=100.00 E-value=1.6e-51 Score=308.71 Aligned_cols=119 Identities=48% Similarity=0.720 Sum_probs=111.1
Q ss_pred cccccccccccccccccCCCchHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhC
Q 033314 2 LRYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEF 81 (122)
Q Consensus 2 ~~~~~r~~~~~~~~~~GGMPSSHSA~v~alat~i~l~~G~~s~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~ 81 (122)
.++++||+||+.+++||||||||||+|+||+|++++.+|||||+|+++++||+||||||.||||++|+||++||+|++++
T Consensus 31 ~~~~~rk~~~~~~~sTGGMPSsHSA~VtALat~ial~~G~dS~lFaiA~vfaiIvm~DA~GVRr~aG~QA~iLN~l~~~~ 110 (153)
T COG1963 31 ELIRTRKLNVTLLFSTGGMPSSHSALVTALATSIALTEGLDSPLFAIAAVFAIIVMYDATGVRRSAGVQARILNQLIEEL 110 (153)
T ss_pred HHHHhccccceeeeecCCCCchHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHhhhhhhHHHhccchHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCCCccccCCCChHHHHHHHHHHHHHHHHHhc
Q 033314 82 PPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRN 120 (122)
Q Consensus 82 ~~~~~~~~~~~lke~lGHtp~EV~~GallGi~ia~~~~~ 120 (122)
.++.+..++++|||.+||||.||++|.++||++++++|.
T Consensus 111 ~~e~~~~~~~~lKellGH~p~eV~~G~~lGI~i~~i~~~ 149 (153)
T COG1963 111 VNEKKDFDKKRLKELLGHTPLEVFAGLLLGILIAWIFYA 149 (153)
T ss_pred HHhhccCCHHHHHHHhCCChHHHHHHHHHHHHHHHHHHH
Confidence 755554444569999999999999999999999998874
No 3
>cd03383 PAP2_diacylglycerolkinase PAP2_like proteins, diacylglycerol_kinase like sub-family. In some prokaryotes, PAP2_like phosphatase domains appear fused to E. coli DAGK-like trans-membrane diacylglycerol kinase domains. The cellular function of these architectures remains to be determined.
Probab=99.43 E-value=6.1e-13 Score=95.20 Aligned_cols=69 Identities=36% Similarity=0.536 Sum_probs=58.4
Q ss_pred ccCCCchHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCCCCCCCCCcccc
Q 033314 17 SGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLREL 96 (122)
Q Consensus 17 ~GGMPSSHSA~v~alat~i~l~~G~~s~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~~~~~~~~lke~ 96 (122)
.+||||+||+..+++++.+.+... +.....+.++++.+|+++ |.+
T Consensus 38 ~~sFPSgHt~~a~a~a~~l~~~~~-~~~~~~~~~~~a~lv~~S----------------------------------Rvy 82 (109)
T cd03383 38 EGGMPSGHAAIAFSIATAISLITN-NPIISILSVLLAVMVAHS----------------------------------RVE 82 (109)
T ss_pred CCCCChHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHH----------------------------------HHH
Confidence 368999999999999998877543 333455678899999998 889
Q ss_pred CC-CChHHHHHHHHHHHHHHHHHhc
Q 033314 97 LG-HTPLQVVAGGILGCVVAFLMRN 120 (122)
Q Consensus 97 lG-Htp~EV~~GallGi~ia~~~~~ 120 (122)
+| |+|.||++|+++|+++++++|.
T Consensus 83 lg~H~psDVlaG~~lG~~~~~~~~~ 107 (109)
T cd03383 83 MKIHTMWEVVVGAILGALITLLIFK 107 (109)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99 9999999999999999998764
No 4
>cd03394 PAP2_like_5 PAP2_like_5 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.26 E-value=1.7e-11 Score=85.51 Aligned_cols=70 Identities=27% Similarity=0.262 Sum_probs=57.5
Q ss_pred ccccCCCchHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCCCCCCCCCcc
Q 033314 15 LDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLR 94 (122)
Q Consensus 15 ~~~GGMPSSHSA~v~alat~i~l~~G~~s~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~~~~~~~~lk 94 (122)
-...+|||+|++..+++++.+....+. ...-...++++++|.++ |
T Consensus 36 ~~~~sfPSgHa~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~s----------------------------------R 80 (106)
T cd03394 36 NGYRSFPSGHTASAFAAATFLQYRYGW-RWYGIPAYALASLVGAS----------------------------------R 80 (106)
T ss_pred CCCCccCcHHHHHHHHHHHHHHHHHcc-hHHHHHHHHHHHHHHHH----------------------------------H
Confidence 456799999999999999998877763 22334556788888887 7
Q ss_pred ccCC-CChHHHHHHHHHHHHHHHHHh
Q 033314 95 ELLG-HTPLQVVAGGILGCVVAFLMR 119 (122)
Q Consensus 95 e~lG-Htp~EV~~GallGi~ia~~~~ 119 (122)
.++| |.|.||++|.++|.+++.++|
T Consensus 81 v~~g~H~~sDV~~G~~lG~~~~~~~~ 106 (106)
T cd03394 81 VVANRHWLSDVLAGAAIGILVGYLVT 106 (106)
T ss_pred HhcCCcCHHHHHHHHHHHHHheeeeC
Confidence 8999 999999999999999987654
No 5
>PRK09597 lipid A 1-phosphatase; Reviewed
Probab=99.21 E-value=6.1e-11 Score=92.77 Aligned_cols=68 Identities=25% Similarity=0.208 Sum_probs=55.0
Q ss_pred ccCCCchHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCCCCCCCCCcccc
Q 033314 17 SGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLREL 96 (122)
Q Consensus 17 ~GGMPSSHSA~v~alat~i~l~~G~~s~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~~~~~~~~lke~ 96 (122)
+.+|||+||+++++.++.+...+++.. ..+.+.++++|+++ |.+
T Consensus 118 ~~SFPSGHt~~af~~a~~l~~~~~~~~--~~~~l~lallVg~S----------------------------------RVY 161 (190)
T PRK09597 118 NFNMPSGHSSMVGLAVAFLMRRYSFKK--YWWLLPLIPLTMLA----------------------------------RIY 161 (190)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHchhH--HHHHHHHHHHHHHH----------------------------------HHH
Confidence 368999999999988877666555433 23345677889987 889
Q ss_pred CC-CChHHHHHHHHHHHHHHHHHhc
Q 033314 97 LG-HTPLQVVAGGILGCVVAFLMRN 120 (122)
Q Consensus 97 lG-Htp~EV~~GallGi~ia~~~~~ 120 (122)
+| |+|.||++|+++|++++.+++.
T Consensus 162 LGvHyPsDVLaG~liGil~~~lf~~ 186 (190)
T PRK09597 162 LDMHTIGAVLAGLGVGMLCVSLFTS 186 (190)
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99 9999999999999999988764
No 6
>cd03385 PAP2_BcrC_like PAP2_like proteins, BcrC_like subfamily. Several members of this family have been annotated as bacitracin transport permeases, as it was suspected that they form the permease component of an ABC transporter system. It was shown, however, that BcrC from Bacillus subtilis posesses undecaprenyl pyrophosphate (UPP) phospatase activity, and it is hypothesized that it competes with bacitracin for UPP, increasing the cell's resistance to bacitracin.
Probab=99.19 E-value=1.1e-10 Score=85.32 Aligned_cols=69 Identities=25% Similarity=0.414 Sum_probs=56.6
Q ss_pred cccCCCchHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCCCCCCCCCccc
Q 033314 16 DSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRE 95 (122)
Q Consensus 16 ~~GGMPSSHSA~v~alat~i~l~~G~~s~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~~~~~~~~lke 95 (122)
.+.+|||.|++..+++++.+.+... .....+.++++++|+++ |-
T Consensus 75 ~~~SFPSgH~~~~~~~~~~l~~~~~--~~~~~~~~~~a~~v~~S----------------------------------Rv 118 (144)
T cd03385 75 ADSSFPSDHTTLFFSIAFSLLLRRR--KWAGWILLILALLVAWS----------------------------------RI 118 (144)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHH----------------------------------HH
Confidence 3469999999999998877654332 22445678899999988 78
Q ss_pred cCC-CChHHHHHHHHHHHHHHHHHhc
Q 033314 96 LLG-HTPLQVVAGGILGCVVAFLMRN 120 (122)
Q Consensus 96 ~lG-Htp~EV~~GallGi~ia~~~~~ 120 (122)
++| |.|.||++|+++|++++++.|.
T Consensus 119 ylg~H~~sDVl~G~~lg~~~~~~~~~ 144 (144)
T cd03385 119 YLGVHYPLDMLGAALVAVLSALLVFQ 144 (144)
T ss_pred HhCCccHHHHHHHHHHHHHHHHHHhC
Confidence 999 9999999999999999998874
No 7
>cd03382 PAP2_dolichyldiphosphatase PAP2_like proteins, dolichyldiphosphatase subfamily. Dolichyldiphosphatase is a membrane-associated protein located in the endoplasmic reticulum and hydrolyzes dolichyl pyrophosphate, as well as dolichylmonophosphate at a low rate. The enzyme is necessary for maintaining proper levels of dolichol-linked oligosaccharides and protein N-glycosylation, and might play a role in re-utilization of the glycosyl carrier lipid for additional rounds of lipid intermediate biosynthesis after its release during protein N-glycosylation reactions.
Probab=99.16 E-value=1.3e-10 Score=86.81 Aligned_cols=70 Identities=39% Similarity=0.428 Sum_probs=54.4
Q ss_pred cccCCCchHHHHHHHHHHHHHHH--hccCc--------cHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCC
Q 033314 16 DSGGMPSSHSATVSALAVAIGLQ--EGSGS--------PSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDH 85 (122)
Q Consensus 16 ~~GGMPSSHSA~v~alat~i~l~--~G~~s--------~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~ 85 (122)
.+.||||+|++.++++++.+.+. ...+. ....+..+++++|+++
T Consensus 79 ~~~SFPSgHa~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~S-------------------------- 132 (159)
T cd03382 79 SGYGMPSSHSQFMGFFAVYLLLFIYLRLGRLNSLVSRFLLSLGLLLLALLVSYS-------------------------- 132 (159)
T ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHHHH--------------------------
Confidence 46699999999988887766653 22222 1233566788889987
Q ss_pred CCCCCCCccccCC-CChHHHHHHHHHHHHHHHHHh
Q 033314 86 PLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMR 119 (122)
Q Consensus 86 ~~~~~~~lke~lG-Htp~EV~~GallGi~ia~~~~ 119 (122)
|-++| |+|.||++|+++|++++++++
T Consensus 133 --------Rvylg~H~~~DVl~G~~lG~~~~~~~~ 159 (159)
T cd03382 133 --------RVYLGYHTVSQVVVGAIVGILLGILWF 159 (159)
T ss_pred --------HHHHccCCHHHHHHHHHHHHHHHHhcC
Confidence 78999 999999999999999998764
No 8
>cd03393 PAP2_like_3 PAP2_like_3 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria and archaea, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.15 E-value=1.7e-10 Score=82.40 Aligned_cols=68 Identities=29% Similarity=0.409 Sum_probs=53.9
Q ss_pred cccCCCchHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCCCCCCCCCccc
Q 033314 16 DSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRE 95 (122)
Q Consensus 16 ~~GGMPSSHSA~v~alat~i~l~~G~~s~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~~~~~~~~lke 95 (122)
.+.+|||+|++..+++++.+..... +.....+..+++.+|++. |.
T Consensus 56 ~~~sFPSgHa~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~s----------------------------------Rv 100 (125)
T cd03393 56 GGYGFPSGHAQTSATFWGSLMLHVR-KKWFTLIGVVLVVLISFS----------------------------------RL 100 (125)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH----------------------------------HH
Confidence 4579999999998888777665543 222334566678888887 78
Q ss_pred cCC-CChHHHHHHHHHHHHHHHHH
Q 033314 96 LLG-HTPLQVVAGGILGCVVAFLM 118 (122)
Q Consensus 96 ~lG-Htp~EV~~GallGi~ia~~~ 118 (122)
++| |.|.||++|+++|+++++++
T Consensus 101 ~lg~H~~sDVl~G~~lG~~~~~~~ 124 (125)
T cd03393 101 YLGVHWPSDVIGGVLIGLLVLVLG 124 (125)
T ss_pred HhcccCHHHHHHHHHHHHHHHHHh
Confidence 999 99999999999999999875
No 9
>cd03391 PAP2_containing_2_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_2. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to eukaryota, lacks functional characterization and may act as a membrane-associated phosphatidic acid phosphatase.
Probab=99.15 E-value=1.1e-10 Score=87.53 Aligned_cols=68 Identities=31% Similarity=0.384 Sum_probs=57.4
Q ss_pred ccCCCchHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCCCCCCCCCcccc
Q 033314 17 SGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLREL 96 (122)
Q Consensus 17 ~GGMPSSHSA~v~alat~i~l~~G~~s~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~~~~~~~~lke~ 96 (122)
.-+|||+|++..+++++.+.+....+.....+.+.++++|.++ |.+
T Consensus 90 ~~SFPSGHa~~a~a~a~~l~~~~~~~~~~~~~~~~~a~~v~~S----------------------------------Rvy 135 (159)
T cd03391 90 KYSFPSGHASRAAFVARFLLNHLVLAVPLRVLLVLWATVVGIS----------------------------------RVL 135 (159)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------------HHH
Confidence 4599999999999999988876653333555677889999998 789
Q ss_pred CC-CChHHHHHHHHHHHHHHHHH
Q 033314 97 LG-HTPLQVVAGGILGCVVAFLM 118 (122)
Q Consensus 97 lG-Htp~EV~~GallGi~ia~~~ 118 (122)
+| |.|.||++|+++|+++++++
T Consensus 136 lg~H~psDVlaG~~lG~~~~~~~ 158 (159)
T cd03391 136 LGRHHVLDVLAGAFLGYLEALLV 158 (159)
T ss_pred hCCcCHHHHHHHHHHHHHHHHhC
Confidence 99 99999999999999998764
No 10
>KOG3146 consensus Dolichyl pyrophosphate phosphatase and related acid phosphatases [Lipid transport and metabolism]
Probab=99.14 E-value=1.1e-10 Score=93.06 Aligned_cols=73 Identities=34% Similarity=0.407 Sum_probs=57.2
Q ss_pred cccccCCCchHHHHHHHHHHHHHH--HhccCcc-----H---HHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCC
Q 033314 14 MLDSGGMPSSHSATVSALAVAIGL--QEGSGSP-----S---FAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPP 83 (122)
Q Consensus 14 ~~~~GGMPSSHSA~v~alat~i~l--~~G~~s~-----~---fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~ 83 (122)
+-+..|||||||+++...+++..+ ++++.+. . -++-+.++..|||+
T Consensus 91 ~~s~yGMPSSHSQfM~Ffs~y~~l~~y~~~~~~~~s~~~~i~s~~~laLs~~v~~s------------------------ 146 (228)
T KOG3146|consen 91 LRSGYGMPSSHSQFMGFFSVYSSLSVYKWLGTNNFSRFLFIKSGLLLALSFYVCYS------------------------ 146 (228)
T ss_pred cccCCCCCchHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHH------------------------
Confidence 445669999999999999887665 3443322 2 23446788899998
Q ss_pred CCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHHHhc
Q 033314 84 DHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN 120 (122)
Q Consensus 84 ~~~~~~~~~lke~lG-Htp~EV~~GallGi~ia~~~~~ 120 (122)
|.+++ ||..||++|+++|.+++.++|.
T Consensus 147 ----------RVyl~yHt~sQVv~G~ivG~l~g~~Wf~ 174 (228)
T KOG3146|consen 147 ----------RVYLKYHTLSQVVVGAIVGGLVGILWFY 174 (228)
T ss_pred ----------HHHHHhccHHHHHHHHHhhhhHHHHHHH
Confidence 88999 9999999999999999998763
No 11
>cd03388 PAP2_SPPase1 PAP2_like proteins, sphingosine-1-phosphatase subfamily. Sphingosine-1-phosphatase is an intracellular enzyme located in the endoplasmic reticulum, which regulates the level of sphingosine-1-phosphate (S1P), a bioactive lipid. S1P acts as a second messenger in the cell, and extracellularly by binding to G-protein coupled receptors of the endothelial differentiation gene family.
Probab=99.13 E-value=2.2e-10 Score=84.47 Aligned_cols=69 Identities=22% Similarity=0.405 Sum_probs=55.3
Q ss_pred cccCCCchHHHHHHHHHHHHHHHhcc--Cc---cHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCCCCCCC
Q 033314 16 DSGGMPSSHSATVSALAVAIGLQEGS--GS---PSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSV 90 (122)
Q Consensus 16 ~~GGMPSSHSA~v~alat~i~l~~G~--~s---~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~~~~~~ 90 (122)
.+-||||+|++..+++++.+.+.... .. ....++++++++|.++
T Consensus 76 ~~~SFPSgH~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~S------------------------------- 124 (151)
T cd03388 76 LEYGFPSTHAMNATAISFYLLIYLYDRYQYPFVLGLILALFYSTLVCLS------------------------------- 124 (151)
T ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH-------------------------------
Confidence 44599999999999999988865321 11 1234567789999998
Q ss_pred CCccccCC-CChHHHHHHHHHHHHHHHHH
Q 033314 91 RPLRELLG-HTPLQVVAGGILGCVVAFLM 118 (122)
Q Consensus 91 ~~lke~lG-Htp~EV~~GallGi~ia~~~ 118 (122)
|-++| |.|.||++|+++|++++.++
T Consensus 125 ---RvylgvH~p~DVl~G~~lG~~~~~~~ 150 (151)
T cd03388 125 ---RIYMGMHSVLDVIAGSLIGVLILLFR 150 (151)
T ss_pred ---HHHhCCCCHHHHHHHHHHHHHHHHHc
Confidence 88999 99999999999999988654
No 12
>cd03395 PAP2_like_4 PAP2_like_4 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.09 E-value=4.3e-10 Score=84.48 Aligned_cols=68 Identities=32% Similarity=0.390 Sum_probs=56.7
Q ss_pred ccCCCchHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCCCCCCCCCcccc
Q 033314 17 SGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLREL 96 (122)
Q Consensus 17 ~GGMPSSHSA~v~alat~i~l~~G~~s~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~~~~~~~~lke~ 96 (122)
.-+|||.||+..+++++.+.+... ..+...+.++++++|.++ |-+
T Consensus 103 ~~SFPSgHt~~a~~~~~~l~~~~~-~~~~~~~~~~~~~~v~~S----------------------------------Rvy 147 (177)
T cd03395 103 SYSFASSHAANSFALALFIWLFFR-RGLFSPVLLLWALLVGYS----------------------------------RVY 147 (177)
T ss_pred CCCCChHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH----------------------------------HHH
Confidence 459999999999999999886543 113445678899999998 889
Q ss_pred CC-CChHHHHHHHHHHHHHHHHHh
Q 033314 97 LG-HTPLQVVAGGILGCVVAFLMR 119 (122)
Q Consensus 97 lG-Htp~EV~~GallGi~ia~~~~ 119 (122)
+| |.|.||++|+++|++++.+.+
T Consensus 148 lG~H~psDVl~G~~lG~~~~~~~~ 171 (177)
T cd03395 148 VGVHYPGDVIAGALIGIISGLLFY 171 (177)
T ss_pred hCCcCHHHHHHHHHHHHHHHHHHH
Confidence 99 999999999999999988654
No 13
>COG0671 PgpB Membrane-associated phospholipid phosphatase [Lipid metabolism]
Probab=99.07 E-value=4.6e-10 Score=81.44 Aligned_cols=70 Identities=30% Similarity=0.457 Sum_probs=57.9
Q ss_pred cccCCCchHHHHHHHHHHHHHHHhccCc------cHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCCCCCC
Q 033314 16 DSGGMPSSHSATVSALAVAIGLQEGSGS------PSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSS 89 (122)
Q Consensus 16 ~~GGMPSSHSA~v~alat~i~l~~G~~s------~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~~~~~ 89 (122)
..++|||+|++..++.+..+.+...... ....+.++++..|+++
T Consensus 132 ~~~sfPSgHt~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~~S------------------------------ 181 (232)
T COG0671 132 SGYSFPSGHAAGAAAAALLLALLLPLRRALLRRVLLLILLLLLAALVGLS------------------------------ 181 (232)
T ss_pred ccCCCCChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH------------------------------
Confidence 4568999999999998888887664322 2346788899999998
Q ss_pred CCCccccCC-CChHHHHHHHHHHHHHHHHHh
Q 033314 90 VRPLRELLG-HTPLQVVAGGILGCVVAFLMR 119 (122)
Q Consensus 90 ~~~lke~lG-Htp~EV~~GallGi~ia~~~~ 119 (122)
|.++| |+|.+|++|.++|++++.+.+
T Consensus 182 ----Rv~lGvH~~~DVi~G~~~g~~~~~~~~ 208 (232)
T COG0671 182 ----RVYLGVHYPSDVIGGALLGALAALLLL 208 (232)
T ss_pred ----HHhcccccchHHHhhHHHHHHHHHHHH
Confidence 78999 999999999999999988754
No 14
>cd01610 PAP2_like PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid phosphatase, vanadium chloroperoxidases, vanadium bromoperoxidases, and several other mostly uncharacterized subfamilies. Several members of this superfamily have been predicted to be transmembrane proteins.
Probab=98.99 E-value=2.2e-09 Score=72.64 Aligned_cols=69 Identities=35% Similarity=0.427 Sum_probs=57.1
Q ss_pred cccCCCchHHHHHHHHHHHHHHHhccC---ccHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCCCCCCCCC
Q 033314 16 DSGGMPSSHSATVSALAVAIGLQEGSG---SPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRP 92 (122)
Q Consensus 16 ~~GGMPSSHSA~v~alat~i~l~~G~~---s~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~~~~~~~~ 92 (122)
...+|||.|++..+++++.+....+.. .....+...++..+++.
T Consensus 49 ~~~sfPSgH~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s--------------------------------- 95 (122)
T cd01610 49 GGYSFPSGHAAFAFALALFLALLLPRRLLRLLLGLLLLLLALLVGLS--------------------------------- 95 (122)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------------------
Confidence 357999999999999999999877632 14556677788888876
Q ss_pred ccccCC-CChHHHHHHHHHHHHHHHHH
Q 033314 93 LRELLG-HTPLQVVAGGILGCVVAFLM 118 (122)
Q Consensus 93 lke~lG-Htp~EV~~GallGi~ia~~~ 118 (122)
|-++| |++.||++|.++|.+++..+
T Consensus 96 -ri~~g~H~~~Dv~~G~~lg~~~~~~~ 121 (122)
T cd01610 96 -RVYLGVHYPSDVLAGALLGILVALLV 121 (122)
T ss_pred -HHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 66778 99999999999999998765
No 15
>PRK10699 phosphatidylglycerophosphatase B; Provisional
Probab=98.99 E-value=1.7e-09 Score=87.29 Aligned_cols=70 Identities=24% Similarity=0.320 Sum_probs=52.7
Q ss_pred cccCCCchHHHHHHHHHHHH-HHH-hccCccHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCCCCCCCCCc
Q 033314 16 DSGGMPSSHSATVSALAVAI-GLQ-EGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPL 93 (122)
Q Consensus 16 ~~GGMPSSHSA~v~alat~i-~l~-~G~~s~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~~~~~~~~l 93 (122)
.+.||||+||++.++++... ++. .......+.+.++++..|+|+
T Consensus 155 ~gySFPSGHa~~a~~~~l~~~~ll~~~~~~~~~~~~~~wa~~v~~S---------------------------------- 200 (244)
T PRK10699 155 TGFAFPSGHTMFAASWALLAVGLLWPRRRYKTVALLMLWATGVMGS---------------------------------- 200 (244)
T ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------------
Confidence 45699999999987755432 222 111233455677889999998
Q ss_pred cccCC-CChHHHHHHHHHHHHHHHHHh
Q 033314 94 RELLG-HTPLQVVAGGILGCVVAFLMR 119 (122)
Q Consensus 94 ke~lG-Htp~EV~~GallGi~ia~~~~ 119 (122)
|.++| |.|.||++|+++|.+++.+.+
T Consensus 201 RvyLGvH~psDVlaG~llG~~~~~l~~ 227 (244)
T PRK10699 201 RLLLGMHWPRDLVVATLISWLLVTVAT 227 (244)
T ss_pred HHHccCcCHHHHHHHHHHHHHHHHHHH
Confidence 88999 999999999999999887654
No 16
>cd03390 PAP2_containing_1_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_1. Most likely membrane-associated phosphatidic acid phosphatases. Plant members of this group are constitutively expressed in many tissues and exhibit both diacylglycerol pyrophosphate phosphatase activity as well as phosphatidate (PA) phosphatase activity, they may have a more generic housekeeping role in lipid metabolism.
Probab=98.98 E-value=1.3e-09 Score=83.20 Aligned_cols=69 Identities=25% Similarity=0.235 Sum_probs=54.9
Q ss_pred cCCCchHHHHHHHHHHHHHHHh--ccC----------ccHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCC
Q 033314 18 GGMPSSHSATVSALAVAIGLQE--GSG----------SPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDH 85 (122)
Q Consensus 18 GGMPSSHSA~v~alat~i~l~~--G~~----------s~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~ 85 (122)
-+|||+||+..+++++.+++.- ... .....+.+++|+.|.++
T Consensus 110 ~SFPSGHas~a~~~~~~l~l~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~S-------------------------- 163 (193)
T cd03390 110 KSFPSGHSSFAFAGLGFLSLYLAGKLHIFDPRGSSWRLLLALLPLLLAILVAVS-------------------------- 163 (193)
T ss_pred cCCCCccHHHHHHHHHHHHHHHHHHhhcccccchHHHHHHHHHHHHHHHHHHHH--------------------------
Confidence 4899999999999988887632 111 11223567788889987
Q ss_pred CCCCCCCccccCC-CChHHHHHHHHHHHHHHHHHhc
Q 033314 86 PLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN 120 (122)
Q Consensus 86 ~~~~~~~lke~lG-Htp~EV~~GallGi~ia~~~~~ 120 (122)
|.++| |.|.||++|+++|++++++.|+
T Consensus 164 --------Ri~~g~H~~sDVlaG~~lG~~~a~~~~~ 191 (193)
T cd03390 164 --------RTRDYRHHFSDVIAGSLIGLIIAYLSYR 191 (193)
T ss_pred --------HHhccccCHHHHHHHHHHHHHHHHheeE
Confidence 78889 9999999999999999998875
No 17
>PLN02525 phosphatidic acid phosphatase family protein
Probab=98.98 E-value=1.5e-09 Score=91.32 Aligned_cols=69 Identities=26% Similarity=0.401 Sum_probs=54.4
Q ss_pred ccCCCchHHHHHHHHHHHHHHHh-c-c--Ccc-----HHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCCCC
Q 033314 17 SGGMPSSHSATVSALAVAIGLQE-G-S--GSP-----SFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPL 87 (122)
Q Consensus 17 ~GGMPSSHSA~v~alat~i~l~~-G-~--~s~-----~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~~~ 87 (122)
..||||+||++.++++..+.+.. . . .++ ..+++++++++|++.
T Consensus 83 eYsFPSgHt~nA~av~~~ll~~l~~~~~~~~~~~~~~~~~l~~l~allV~~S---------------------------- 134 (352)
T PLN02525 83 EYGLPSSHTLNTVCLSGYLLHYVLSYLQNVDASVIFAGLALFCLLVALVGFG---------------------------- 134 (352)
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHH----------------------------
Confidence 45999999999999998776542 1 1 111 134677899999998
Q ss_pred CCCCCccccCC-CChHHHHHHHHHHHHHHHHHh
Q 033314 88 SSVRPLRELLG-HTPLQVVAGGILGCVVAFLMR 119 (122)
Q Consensus 88 ~~~~~lke~lG-Htp~EV~~GallGi~ia~~~~ 119 (122)
|-|+| |+|.||++|+++|++++.+.+
T Consensus 135 ------RlYLGvH~psDVl~G~~lG~~i~~~~~ 161 (352)
T PLN02525 135 ------RLYLGMHSPIDIIAGLAIGLVILAFWL 161 (352)
T ss_pred ------HHheeccCHHHHHHHHHHHHHHHHHHH
Confidence 88999 999999999999999987653
No 18
>cd03389 PAP2_lipid_A_1_phosphatase PAP2_like proteins, Lipid A 1-phosphatase subfamily. Lipid A 1-phosphatase, or LpxE from Francisella novicida selectively dephosphorylates lipid A at the 1-position. Lipid A is the membrane-anchor component of lipopolysaccharides (LPS), the major constituents of the outer membrane in many gram-negative bacteria.
Probab=98.97 E-value=2.8e-09 Score=81.34 Aligned_cols=67 Identities=34% Similarity=0.495 Sum_probs=55.0
Q ss_pred ccCCCchHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCCCCCCCCCcccc
Q 033314 17 SGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLREL 96 (122)
Q Consensus 17 ~GGMPSSHSA~v~alat~i~l~~G~~s~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~~~~~~~~lke~ 96 (122)
..+|||+||+..+++++.+.+.... .-....+++++|.++ |-+
T Consensus 117 ~~SFPSGHa~~a~~~~~~l~~~~~~---~~~~~~~~~~lv~~S----------------------------------Riy 159 (186)
T cd03389 117 FTSFPSGHSATAGAAAAALALLFPR---YRWAFILLALLIAFS----------------------------------RVI 159 (186)
T ss_pred CCCcCcHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH----------------------------------HHH
Confidence 3489999999999999988876531 223346678888887 789
Q ss_pred CC-CChHHHHHHHHHHHHHHHHHhc
Q 033314 97 LG-HTPLQVVAGGILGCVVAFLMRN 120 (122)
Q Consensus 97 lG-Htp~EV~~GallGi~ia~~~~~ 120 (122)
+| |+|.||++|+++|++++.+.|.
T Consensus 160 lg~H~~sDVl~G~~lG~~~~~~~~~ 184 (186)
T cd03389 160 VGAHYPSDVIAGSLLGAVTALALYQ 184 (186)
T ss_pred cCCcCHHHHHHHHHHHHHHHHHHHH
Confidence 99 9999999999999999988774
No 19
>PF01569 PAP2: PAP2 superfamily This family includes the following Prosite family; InterPro: IPR000326 This entry represents type 2 phosphatidic acid phosphatase (PAP2; 3.1.3.4 from EC) enzymes, such as phosphatidylglycerophosphatase B 3.1.3.27 from EC from Escherichia coli. PAP2 enzymes have a core structure consisting of a 5-helical bundle, where the beginning of the third helix binds the cofactor []. PAP2 enzymes catalyse the dephosphorylation of phosphatidate, yielding diacylglycerol and inorganic phosphate []. In eukaryotic cells, PAP activity has a central role in the synthesis of phospholipids and triacylglycerol through its product diacylglycerol, and it also generates and/or degrades lipid-signalling molecules that are related to phosphatidate. Other related enzymes have a similar core structure, including haloperoxidases such as bromoperoxidase (contains one core bundle, but forms a dimer), chloroperoxidases (contains two core bundles arranged as in other family dimers), bacitracin transport permease from Bacillus licheniformis, glucose-6-phosphatase from rat. The vanadium-dependent haloperoxidases exclusively catalyse the oxidation of halides, and act as histidine phosphatases, using histidine for the nucleophilic attack in the first step of the reaction []. Amino acid residues involved in binding phosphate/vanadate are conserved between the two families, supporting a proposal that vanadium passes through a tetrahedral intermediate during the reaction mechanism.; GO: 0003824 catalytic activity, 0016020 membrane; PDB: 1QI9_B 1IW8_A 1EOI_A 1D2T_A 1QHB_D 1UP8_C 2IPB_A 1VNS_A 1VNF_A 1VNE_A ....
Probab=98.96 E-value=4.4e-09 Score=72.93 Aligned_cols=70 Identities=36% Similarity=0.503 Sum_probs=55.5
Q ss_pred ccCCCchHHHHHHHHHHHHHHHhccCcc----HHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCCCCCCCCC
Q 033314 17 SGGMPSSHSATVSALAVAIGLQEGSGSP----SFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRP 92 (122)
Q Consensus 17 ~GGMPSSHSA~v~alat~i~l~~G~~s~----~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~~~~~~~~ 92 (122)
.++|||+|++..++.++.+....+.... .+.+...++.++.+.
T Consensus 48 ~~sfPSgH~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~s--------------------------------- 94 (129)
T PF01569_consen 48 FNSFPSGHAAIAAAFAFFLAYYLGSRGWIRILLFLLAIVLAFLVALS--------------------------------- 94 (129)
T ss_dssp S-SSS-HHHHHHHHHHHHHHHHCCCCHHHSEEHHHHHHHHHHHHHHH---------------------------------
T ss_pred CCcCcchhhhhHHHHHhhhhhhhhccccccchhhHHHHHHHHHhhcC---------------------------------
Confidence 4699999999999999998888764332 345677788888876
Q ss_pred ccccCC-CChHHHHHHHHHHHHHHHHHhc
Q 033314 93 LRELLG-HTPLQVVAGGILGCVVAFLMRN 120 (122)
Q Consensus 93 lke~lG-Htp~EV~~GallGi~ia~~~~~ 120 (122)
|.+.| |.+.||++|.++|.+++.+++.
T Consensus 95 -rv~~g~H~~~Dvi~G~~lg~~~~~~~~~ 122 (129)
T PF01569_consen 95 -RVYLGAHFFSDVIAGILLGILIAYLFYR 122 (129)
T ss_dssp -HHHTTSS-HHHHHHHHHHHHHHHHHHCC
T ss_pred -EEEcCeEehHHHHHHHHHHHHHHHHHHH
Confidence 77889 9999999999999999988654
No 20
>cd03384 PAP2_wunen PAP2, wunen subfamily. Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the survival of PGCs and is essential in the migration process of these cells towards the somatic gonadal precursors.
Probab=98.96 E-value=2.6e-09 Score=79.31 Aligned_cols=68 Identities=28% Similarity=0.233 Sum_probs=52.5
Q ss_pred ccCCCchHHHHHHHHHHHHHHHh--ccC---c-----cHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCCC
Q 033314 17 SGGMPSSHSATVSALAVAIGLQE--GSG---S-----PSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHP 86 (122)
Q Consensus 17 ~GGMPSSHSA~v~alat~i~l~~--G~~---s-----~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~~ 86 (122)
.-+|||+||+..++.++.+.+.- .+. . ....+.+++++.|++.
T Consensus 71 ~~SFPSGHs~~a~~~~~~l~l~l~~~~~~~~~~~~~~~~~~~~~~~a~~v~~s--------------------------- 123 (150)
T cd03384 71 RLSFPSGHASLSMYAAVFLALYLQARLKLRGSRLLRPLLQFLLLALALYVGLS--------------------------- 123 (150)
T ss_pred ccCCCcHhHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHhHh---------------------------
Confidence 34999999999998888876542 111 1 1233567788888876
Q ss_pred CCCCCCccccCC-CChHHHHHHHHHHHHHHHHH
Q 033314 87 LSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM 118 (122)
Q Consensus 87 ~~~~~~lke~lG-Htp~EV~~GallGi~ia~~~ 118 (122)
|.+.| |.|.||++|+++|++++++.
T Consensus 124 -------Rv~~~~H~~sDviaG~~lG~~~~~~~ 149 (150)
T cd03384 124 -------RISDYKHHWSDVLAGALLGSVIALFL 149 (150)
T ss_pred -------hhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 77888 99999999999999999763
No 21
>cd03392 PAP2_like_2 PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=98.95 E-value=3.7e-09 Score=79.16 Aligned_cols=70 Identities=26% Similarity=0.285 Sum_probs=54.7
Q ss_pred cccCCCchHHHHHHHHHHHHHHHh--ccCc-----cHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCCCCC
Q 033314 16 DSGGMPSSHSATVSALAVAIGLQE--GSGS-----PSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLS 88 (122)
Q Consensus 16 ~~GGMPSSHSA~v~alat~i~l~~--G~~s-----~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~~~~ 88 (122)
...+|||+|++..++++..+.+.- .... ...++++++++.|++.
T Consensus 99 ~~~sfPSgHa~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s----------------------------- 149 (182)
T cd03392 99 GGYSFPSGHAMGATVLYGFLAYLLARRLPRRRVRILLLILAAILILLVGLS----------------------------- 149 (182)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHHHHHHH-----------------------------
Confidence 456999999999999987766532 2221 3345667888899987
Q ss_pred CCCCccccCC-CChHHHHHHHHHHHHHHHHHh
Q 033314 89 SVRPLRELLG-HTPLQVVAGGILGCVVAFLMR 119 (122)
Q Consensus 89 ~~~~lke~lG-Htp~EV~~GallGi~ia~~~~ 119 (122)
|.++| |+|.||++|+++|++++.+.+
T Consensus 150 -----Rv~lg~H~~sDvl~G~~lG~~~~~~~~ 176 (182)
T cd03392 150 -----RLYLGVHYPSDVLAGWLLGLAWLALLI 176 (182)
T ss_pred -----HHHhcccchhHHHHHHHHHHHHHHHHH
Confidence 78999 999999999999999987654
No 22
>cd03381 PAP2_glucose_6_phosphatase PAP2_like proteins, glucose-6-phosphatase subfamily. Glucose-6-phosphatase converts glucose-6-phosphate into free glucose and is active in the lumen of the endoplasmic reticulum, where it is bound to the membrane. The generation of free glucose is an important control point in metabolism, and stands at the end of gluconeogenesis and the release of glucose from glycogen. Deficiency of glucose-6-phosphatase leads to von Gierke's disease.
Probab=98.88 E-value=6.1e-09 Score=83.46 Aligned_cols=69 Identities=28% Similarity=0.275 Sum_probs=50.6
Q ss_pred ccCCCchHHHHHHHHHHHHHHHh------ccCc-----cHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCC
Q 033314 17 SGGMPSSHSATVSALAVAIGLQE------GSGS-----PSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDH 85 (122)
Q Consensus 17 ~GGMPSSHSA~v~alat~i~l~~------G~~s-----~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~ 85 (122)
+.||||+||...+++...+...- ...+ ....+...+.+.|+++
T Consensus 71 gysfPSGHam~a~a~~~~l~~~l~~~~~~r~~~~~~~~~~~~~~~~~~~~V~~S-------------------------- 124 (235)
T cd03381 71 GPGSPSGHAMGTTAVLLVMVTALLSHLAGRKRSRFLRVMLWLVFWGVQLAVCLS-------------------------- 124 (235)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHH--------------------------
Confidence 56999999988887766554321 1101 1244556677778887
Q ss_pred CCCCCCCccccCC-CChHHHHHHHHHHHHHHHHHh
Q 033314 86 PLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMR 119 (122)
Q Consensus 86 ~~~~~~~lke~lG-Htp~EV~~GallGi~ia~~~~ 119 (122)
|.++| |+|.||++|.++|++++.++.
T Consensus 125 --------RvYLgvHfpsDVlaG~~lGi~~~~~~~ 151 (235)
T cd03381 125 --------RIYLAAHFPHQVIAGVISGIAVAETFS 151 (235)
T ss_pred --------HHhhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 88999 999999999999999987653
No 23
>PRK11837 undecaprenyl pyrophosphate phosphatase; Provisional
Probab=98.87 E-value=9.1e-09 Score=80.17 Aligned_cols=67 Identities=21% Similarity=0.341 Sum_probs=52.9
Q ss_pred cccCCCchHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCCCCCCCCCccc
Q 033314 16 DSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRE 95 (122)
Q Consensus 16 ~~GGMPSSHSA~v~alat~i~l~~G~~s~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~~~~~~~~lke 95 (122)
.+.+|||+|++.++++++.+-+... .....+.+.+|++|+++ |.
T Consensus 101 ~~~SFPSgHa~~~~~~a~~~l~~~~--~~~~~~~~~~a~lva~S----------------------------------RV 144 (202)
T PRK11837 101 ADDSFPSDHGTVIFTFALAFLFWHR--LWSGSLLMAIAVAIAWS----------------------------------RV 144 (202)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH----------------------------------HH
Confidence 4469999999998888765433221 12445677889999998 89
Q ss_pred cCC-CChHHHHHHHHHHHHHHHHH
Q 033314 96 LLG-HTPLQVVAGGILGCVVAFLM 118 (122)
Q Consensus 96 ~lG-Htp~EV~~GallGi~ia~~~ 118 (122)
++| |.|.+|++|+++|++++.+.
T Consensus 145 ylGvHypsDVlgG~~lG~~~~~~~ 168 (202)
T PRK11837 145 YLGVHWPLDMLGALLVGMIGCLSA 168 (202)
T ss_pred HhcCccHHHHHHHHHHHHHHHHHH
Confidence 999 99999999999999998854
No 24
>smart00014 acidPPc Acid phosphatase homologues.
Probab=98.73 E-value=5.8e-08 Score=67.60 Aligned_cols=69 Identities=30% Similarity=0.433 Sum_probs=54.2
Q ss_pred cccCCCchHHHHHHHHHHHHHHHhcc---CccHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCCCCCCCCC
Q 033314 16 DSGGMPSSHSATVSALAVAIGLQEGS---GSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRP 92 (122)
Q Consensus 16 ~~GGMPSSHSA~v~alat~i~l~~G~---~s~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~~~~~~~~ 92 (122)
...++||.|++..++.++.+.....- +.......++++..+.+.
T Consensus 43 ~~~sfPSgHa~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s--------------------------------- 89 (116)
T smart00014 43 AGYSFPSGHTAFAFAFALFLLLYLPARAARKLLIILLLLLALVVGFS--------------------------------- 89 (116)
T ss_pred CCCCcChHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH---------------------------------
Confidence 45699999999999999988765431 223344567777777765
Q ss_pred ccccCC-CChHHHHHHHHHHHHHHHHH
Q 033314 93 LRELLG-HTPLQVVAGGILGCVVAFLM 118 (122)
Q Consensus 93 lke~lG-Htp~EV~~GallGi~ia~~~ 118 (122)
|.++| |.|.||++|.++|.+++.+.
T Consensus 90 -Ri~~g~H~~~Dv~~G~~lG~~v~~~~ 115 (116)
T smart00014 90 -RVYLGAHWPSDVLAGSLLGILIAAVL 115 (116)
T ss_pred -HHHhcccCHHHHHHHHHHHHHHHHHc
Confidence 78889 99999999999999998653
No 25
>cd03396 PAP2_like_6 PAP2_like_6 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which mainly contains bacterial proteins, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=98.72 E-value=6.7e-08 Score=74.07 Aligned_cols=71 Identities=21% Similarity=0.195 Sum_probs=54.8
Q ss_pred cccCCCchHHHHHHHHHHHHHHHhccCc----cHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCCCCCCCC
Q 033314 16 DSGGMPSSHSATVSALAVAIGLQEGSGS----PSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVR 91 (122)
Q Consensus 16 ~~GGMPSSHSA~v~alat~i~l~~G~~s----~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~~~~~~~ 91 (122)
....|||.|++..++++....+...... ....++++++++|.+.
T Consensus 120 ~~~SFPSGHas~af~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~s-------------------------------- 167 (197)
T cd03396 120 KGCSFPSGHASAGFALLALYFLFRRRRPRLARLVLAAGLALGALMGLA-------------------------------- 167 (197)
T ss_pred CCCcCCchhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH--------------------------------
Confidence 4458999999999988755444332222 2344567788888887
Q ss_pred CccccCC-CChHHHHHHHHHHHHHHHHHhc
Q 033314 92 PLRELLG-HTPLQVVAGGILGCVVAFLMRN 120 (122)
Q Consensus 92 ~lke~lG-Htp~EV~~GallGi~ia~~~~~ 120 (122)
|.+.| |.|.+|++|+++|.+++++.|.
T Consensus 168 --Ri~~G~Hf~SDvl~g~~ig~~~~~~~~~ 195 (197)
T cd03396 168 --RMARGAHFLSDVLWSLLLVWLIALLLYR 195 (197)
T ss_pred --HHHcCCchHHHHHHHHHHHHHHHHHHHH
Confidence 78889 9999999999999999998874
No 26
>PLN02731 Putative lipid phosphate phosphatase
Probab=98.69 E-value=6.2e-08 Score=81.32 Aligned_cols=68 Identities=22% Similarity=0.190 Sum_probs=54.2
Q ss_pred CCCchHHHHHHHHHHHHHHHh-c-c---C-------ccHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCCC
Q 033314 19 GMPSSHSATVSALAVAIGLQE-G-S---G-------SPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHP 86 (122)
Q Consensus 19 GMPSSHSA~v~alat~i~l~~-G-~---~-------s~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~~ 86 (122)
+|||+||++.++..+.+++.. + + + ..+..+.+++|+.|+++
T Consensus 180 SFPSGHSS~sfagl~fLslyL~~kl~~~~~~~~~~rl~l~~lpll~A~lIalS--------------------------- 232 (333)
T PLN02731 180 SFPSGHTSWSFSGLGFLSLYLSGKIQAFDGKGHVAKLCIVILPLLFAALVGIS--------------------------- 232 (333)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHH---------------------------
Confidence 899999999999999888743 1 1 1 02224567788888887
Q ss_pred CCCCCCccccCC-CChHHHHHHHHHHHHHHHHHhc
Q 033314 87 LSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN 120 (122)
Q Consensus 87 ~~~~~~lke~lG-Htp~EV~~GallGi~ia~~~~~ 120 (122)
|.+.+ |.|.+|++|+++|++++++.|.
T Consensus 233 -------RV~Dy~Hh~sDVlaG~lLG~~iA~~~Y~ 260 (333)
T PLN02731 233 -------RVDDYWHHWQDVFAGGLLGLAISTICYL 260 (333)
T ss_pred -------HHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 56777 9999999999999999998875
No 27
>PLN02250 lipid phosphate phosphatase
Probab=98.64 E-value=1e-07 Score=79.38 Aligned_cols=69 Identities=23% Similarity=0.148 Sum_probs=53.8
Q ss_pred cCCCchHHHHHHHHHHHHHHHh-c----cC---c----cHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCC
Q 033314 18 GGMPSSHSATVSALAVAIGLQE-G----SG---S----PSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDH 85 (122)
Q Consensus 18 GGMPSSHSA~v~alat~i~l~~-G----~~---s----~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~ 85 (122)
-+|||+||+..++..+.+++.. + ++ . .+..+.+++|++|+++
T Consensus 161 ~SFPSGHSS~afa~~~fLslyL~~kl~~~~~~~~~~r~~l~~lpll~A~lVa~S-------------------------- 214 (314)
T PLN02250 161 KSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRGHVAKLCIVFLPLLVAALVGVS-------------------------- 214 (314)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHHHH--------------------------
Confidence 4899999999999998887642 1 11 1 1224557788888876
Q ss_pred CCCCCCCccccCC-CChHHHHHHHHHHHHHHHHHhc
Q 033314 86 PLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN 120 (122)
Q Consensus 86 ~~~~~~~lke~lG-Htp~EV~~GallGi~ia~~~~~ 120 (122)
|.+.+ |.|.+|++|+++|++++++.|.
T Consensus 215 --------RI~dy~Hh~sDVlaG~lIG~~~A~~~y~ 242 (314)
T PLN02250 215 --------RVDDYWHHWQDVFAGALIGLTVASFCYL 242 (314)
T ss_pred --------HHhcCCcCHHHHHHHHHHHHHHHHHHHH
Confidence 56778 9999999999999999998775
No 28
>PLN02715 lipid phosphate phosphatase
Probab=98.58 E-value=1.6e-07 Score=78.67 Aligned_cols=69 Identities=25% Similarity=0.249 Sum_probs=53.8
Q ss_pred cCCCchHHHHHHHHHHHHHHHh-cc----Cc-------cHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCC
Q 033314 18 GGMPSSHSATVSALAVAIGLQE-GS----GS-------PSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDH 85 (122)
Q Consensus 18 GGMPSSHSA~v~alat~i~l~~-G~----~s-------~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~ 85 (122)
-+|||+||++.++.++.+++.. +. +. .+..+.+++|+.|.++
T Consensus 185 ~SFPSGHSS~sfagl~~Lsl~L~~kl~~~~~~~~~~k~~l~~lpll~A~lIalS-------------------------- 238 (327)
T PLN02715 185 KSFPSGHTSWSFAGLTFLSLYLSGKIKAFNGEGHVAKLCLVIFPLLAACLVGIS-------------------------- 238 (327)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHH--------------------------
Confidence 4899999999999999888643 21 10 1234557788888876
Q ss_pred CCCCCCCccccCC-CChHHHHHHHHHHHHHHHHHhc
Q 033314 86 PLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN 120 (122)
Q Consensus 86 ~~~~~~~lke~lG-Htp~EV~~GallGi~ia~~~~~ 120 (122)
|.+.+ |.|.+|++|+++|++++++.|.
T Consensus 239 --------Rv~Dy~Hh~sDVlaG~lLG~~~a~~~y~ 266 (327)
T PLN02715 239 --------RVDDYWHHWQDVFAGALIGILVAAFCYR 266 (327)
T ss_pred --------HHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 56777 9999999999999999998775
No 29
>cd03397 PAP2_acid_phosphatase PAP2, bacterial acid phosphatase or class A non-specific acid phosphatases. These enzymes catalyze phosphomonoester hydrolysis, with optimal activity in low pH conditions. They are secreted into the periplasmic space, and their physiological role remains to be determined.
Probab=98.54 E-value=3.8e-07 Score=72.29 Aligned_cols=69 Identities=20% Similarity=0.210 Sum_probs=53.4
Q ss_pred ccccCCCchHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCCCCCCCCCcc
Q 033314 15 LDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLR 94 (122)
Q Consensus 15 ~~~GGMPSSHSA~v~alat~i~l~~G~~s~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~~~~~~~~lk 94 (122)
-.++++||+|++..++.++.+.....-. +...+.++..+.++ |
T Consensus 147 ~~~~SfPSGHa~~a~a~a~~La~~~p~~---~~~l~~~a~~~g~S----------------------------------R 189 (232)
T cd03397 147 AKDGSYPSGHTAAGYAWALILAELVPER---ADEILARGSEYGQS----------------------------------R 189 (232)
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH----------------------------------H
Confidence 3578999999999999998887765421 11234566677766 7
Q ss_pred ccCC-CChHHHHHHHHHHHHHHHHHhc
Q 033314 95 ELLG-HTPLQVVAGGILGCVVAFLMRN 120 (122)
Q Consensus 95 e~lG-Htp~EV~~GallGi~ia~~~~~ 120 (122)
.+.| |.|.+|++|.++|..+...+.+
T Consensus 190 v~~GvH~psDV~aG~~lG~~~~a~l~~ 216 (232)
T cd03397 190 IVCGVHWPSDVMGGRIMAAALVAALLA 216 (232)
T ss_pred HhcCCcCHHHHHHHHHHHHHHHHHHhc
Confidence 8999 9999999999999998776654
No 30
>cd03380 PAP2_like_1 PAP2_like_1 proteins, a sub-family of PAP2, containing bacterial acid phosphatase, vanadium chloroperoxidases and vanadium bromoperoxidases.
Probab=98.52 E-value=5.5e-07 Score=69.33 Aligned_cols=66 Identities=27% Similarity=0.241 Sum_probs=53.2
Q ss_pred cccCCCchHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCCCCCCCCCccc
Q 033314 16 DSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRE 95 (122)
Q Consensus 16 ~~GGMPSSHSA~v~alat~i~l~~G~~s~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~~~~~~~~lke 95 (122)
..+++||.||+..+++++.+....+- .+...+.++..+.++ |.
T Consensus 141 ~~~SfPSGHa~~a~a~a~~l~~~~~~---~~~~~~~~a~~~~~S----------------------------------Rv 183 (209)
T cd03380 141 KHPSYPSGHATFGGAAALVLAELFPE---RAAELLARAAEAGNS----------------------------------RV 183 (209)
T ss_pred CCCCcCCHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH----------------------------------hh
Confidence 56899999999999999999877662 122334566777765 78
Q ss_pred cCC-CChHHHHHHHHHHHHHHHHH
Q 033314 96 LLG-HTPLQVVAGGILGCVVAFLM 118 (122)
Q Consensus 96 ~lG-Htp~EV~~GallGi~ia~~~ 118 (122)
+.| |.|.+|++|..+|..++-.+
T Consensus 184 ~~G~H~~sDv~aG~~lG~~i~~~~ 207 (209)
T cd03380 184 VAGVHWPSDVEAGRILGEAIAAAL 207 (209)
T ss_pred hCCeecHHHHHHHHHHHHHHHHHH
Confidence 999 99999999999999998654
No 31
>KOG2822 consensus Sphingoid base-phosphate phosphatase [Lipid transport and metabolism]
Probab=98.44 E-value=3.3e-07 Score=78.36 Aligned_cols=71 Identities=23% Similarity=0.431 Sum_probs=52.3
Q ss_pred ccccCCCchHHHHHHHHHHHH----HHHhccCccH----HHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCCC
Q 033314 15 LDSGGMPSSHSATVSALAVAI----GLQEGSGSPS----FAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHP 86 (122)
Q Consensus 15 ~~~GGMPSSHSA~v~alat~i----~l~~G~~s~~----fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~~ 86 (122)
-.-.||||+|+++.+|+.... ...+.++.|. +.+++++.+.|++.
T Consensus 154 ~~EYG~PStHt~natais~~~~~~ls~~d~~s~p~~~lgl~lv~~y~~lv~lg--------------------------- 206 (407)
T KOG2822|consen 154 TKEYGMPSTHTMNATAISFYFFLVLSTMDRESYPIQYLGLSLVLLYYALVCLG--------------------------- 206 (407)
T ss_pred hhhhCCCcchhhhhhHHHHHHHHHHHHhchhhhHHHHHHHHHHHHHHHHHHHH---------------------------
Confidence 356899999999999988773 1122333342 33455566666665
Q ss_pred CCCCCCccccCC-CChHHHHHHHHHHHHHHHHHh
Q 033314 87 LSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMR 119 (122)
Q Consensus 87 ~~~~~~lke~lG-Htp~EV~~GallGi~ia~~~~ 119 (122)
|.|.| |+..++++|.++|+++..+.|
T Consensus 207 -------RiY~GMHgvlDi~sG~ligvl~~~~~~ 233 (407)
T KOG2822|consen 207 -------RIYCGMHGVLDIVSGLLIGVLILILRY 233 (407)
T ss_pred -------HHHhcchHHHHHHhhhHHHHHHhhhhh
Confidence 78999 999999999999999988765
No 32
>cd03386 PAP2_Aur1_like PAP2_like proteins, Aur1_like subfamily. Yeast Aur1p or Ipc1p is necessary for the addition of inositol phosphate to ceramide, an essential step in yeast sphingolipid synthesis, and is the target of several antifungal compounds such as aureobasidin.
Probab=98.41 E-value=1.2e-06 Score=66.49 Aligned_cols=70 Identities=21% Similarity=0.189 Sum_probs=55.7
Q ss_pred ccccCCCchHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCCCCCCCCCcc
Q 033314 15 LDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLR 94 (122)
Q Consensus 15 ~~~GGMPSSHSA~v~alat~i~l~~G~~s~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~~~~~~~~lk 94 (122)
-+...|||.|++..+.++..+..... .....+..+++++++++ +
T Consensus 114 ~~~~~fPS~H~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~i~~s----------------------------------~ 157 (186)
T cd03386 114 NPFNAFPSLHVAWAVLAALFLWRHRR--RLLRWLAVLWPLLIWLS----------------------------------T 157 (186)
T ss_pred CCcceeCcHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH----------------------------------H
Confidence 36779999999999988877766543 22456777788888877 6
Q ss_pred ccCC-CChHHHHHHHHHHHHHHHHHhc
Q 033314 95 ELLG-HTPLQVVAGGILGCVVAFLMRN 120 (122)
Q Consensus 95 e~lG-Htp~EV~~GallGi~ia~~~~~ 120 (122)
.++| |.+.||++|+++|.++..+.+.
T Consensus 158 v~~~~H~~~Dv~~G~~l~~~~~~~~~~ 184 (186)
T cd03386 158 LYLGNHYFIDLVGGIALALLSFYLARR 184 (186)
T ss_pred HHHCCccHHHHHHHHHHHHHHHHHhhc
Confidence 7778 9999999999999998877653
No 33
>cd03398 PAP2_haloperoxidase PAP2, haloperoxidase_like subfamily. Haloperoxidases catalyze the oxidation of halides such as bromide or chloride by hydrogen peroxide, which results in subsequent halogenation of organic substrates, or halide-assisted disproportionation of hydrogen peroxide forming dioxygen. They are likely to participate in the biosynthesis of halogenated natural products, such as volatile halogenated hydrocarbons, chiral halogenated terpenes, acetogenins and indoles.
Probab=98.37 E-value=2.6e-06 Score=67.05 Aligned_cols=69 Identities=26% Similarity=0.200 Sum_probs=55.4
Q ss_pred cccCCCchHHHHHHHHHHHHHHHhccCcc------------------HHHHHHHHHHHHHHhccchhhhhhHhHHHHHHH
Q 033314 16 DSGGMPSSHSATVSALAVAIGLQEGSGSP------------------SFAIAVVLACIVMYDASGVRLHAGRQAELLNQI 77 (122)
Q Consensus 16 ~~GGMPSSHSA~v~alat~i~l~~G~~s~------------------~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l 77 (122)
...++||.|+++.++.++.+....|-+.. .+.....++..+.++
T Consensus 143 ~~psyPSGHa~~a~a~a~vL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~S------------------ 204 (232)
T cd03398 143 PHPSYPSGHATFAGAAATVLKALFGSDKVPDTVSEPDEGGPSTGVTRVWAELNELADEVAIS------------------ 204 (232)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHhCCCCCCCCccccccCCCCCCCcccHhHHHHHHHHHHHH------------------
Confidence 46799999999999999999887774221 344455667777765
Q ss_pred hhhCCCCCCCCCCCCccccCC-CChHHHHHHHHHHHHHHHHH
Q 033314 78 VCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM 118 (122)
Q Consensus 78 ~~~~~~~~~~~~~~~lke~lG-Htp~EV~~GallGi~ia~~~ 118 (122)
|.+.| |.|.+|.+|..+|..++-.+
T Consensus 205 ----------------Rvy~GvH~~sDv~~G~~lG~~va~~v 230 (232)
T cd03398 205 ----------------RVYAGVHFRSDDAAGAALGEQIGAAA 230 (232)
T ss_pred ----------------HHhccccChHHHHHHHHHHHHHHHHH
Confidence 78999 99999999999999998754
No 34
>KOG3030 consensus Lipid phosphate phosphatase and related enzymes of the PAP2 family [Lipid transport and metabolism]
Probab=97.79 E-value=7.3e-05 Score=62.54 Aligned_cols=69 Identities=25% Similarity=0.323 Sum_probs=47.6
Q ss_pred CCCchHHHHHHHHHHHHHHHh-----ccC-c----cH-HHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCCCC
Q 033314 19 GMPSSHSATVSALAVAIGLQE-----GSG-S----PS-FAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPL 87 (122)
Q Consensus 19 GMPSSHSA~v~alat~i~l~~-----G~~-s----~~-fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~~~ 87 (122)
.|||.|||+.++-++++++.. ... + +. -.+-+.+|++|..+
T Consensus 180 SFPSGHsS~s~y~~~flalyl~~~~~~~~~~rllr~~l~f~~l~~A~~v~lS---------------------------- 231 (317)
T KOG3030|consen 180 SFPSGHSSFSFYAMGFLALYLQARLFWFGRGRLLRPLLQFLPLMLALLVGLS---------------------------- 231 (317)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHeee----------------------------
Confidence 799999999999999999543 111 1 11 12234455555543
Q ss_pred CCCCCccccCCCChHHHHHHHHHHHHHHHHHhc
Q 033314 88 SSVRPLRELLGHTPLQVVAGGILGCVVAFLMRN 120 (122)
Q Consensus 88 ~~~~~lke~lGHtp~EV~~GallGi~ia~~~~~ 120 (122)
|.-++. |.|.+|++|+++|+++|++.+.
T Consensus 232 ----RV~DYk-HHwsDV~aG~liG~~~A~~~~~ 259 (317)
T KOG3030|consen 232 ----RVSDYK-HHWSDVLAGALIGAFVAYFLYR 259 (317)
T ss_pred ----hhcccc-cccHHHHHHHHHHHHHHHHHHh
Confidence 223332 7789999999999999998764
No 35
>KOG4268 consensus Uncharacterized conserved protein containing PAP2 domain [Function unknown]
Probab=97.61 E-value=0.00022 Score=55.50 Aligned_cols=68 Identities=26% Similarity=0.343 Sum_probs=49.3
Q ss_pred cccCCCchHHHHHHHHHHHHHHHhccCccHHH-HHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCCCCCCCCCcc
Q 033314 16 DSGGMPSSHSATVSALAVAIGLQEGSGSPSFA-IAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLR 94 (122)
Q Consensus 16 ~~GGMPSSHSA~v~alat~i~l~~G~~s~~fa-la~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~~~~~~~~lk 94 (122)
.-..+||.|++=++-++.+..-..-..-|... +.+.||.+|..+ |
T Consensus 106 DiYsFPsGHaSRaamv~~~~l~~a~~a~Plyv~l~~~walvvglS----------------------------------R 151 (189)
T KOG4268|consen 106 DIYSFPSGHASRAAMVSKFFLSHAVLAVPLYVLLLVLWALVVGLS----------------------------------R 151 (189)
T ss_pred hhhcCCCcchHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH----------------------------------H
Confidence 45789999998776665433322222223333 368899999977 7
Q ss_pred ccCC-CChHHHHHHHHHHHHHHHH
Q 033314 95 ELLG-HTPLQVVAGGILGCVVAFL 117 (122)
Q Consensus 95 e~lG-Htp~EV~~GallGi~ia~~ 117 (122)
..+| |+..+|++|+++|++=+.+
T Consensus 152 v~lGRHyvtDVlaG~fiGylearl 175 (189)
T KOG4268|consen 152 VMLGRHYVTDVLAGFFIGYLEARL 175 (189)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHH
Confidence 8999 9999999999999987654
No 36
>PF14378 PAP2_3: PAP2 superfamily
Probab=97.00 E-value=0.0023 Score=48.42 Aligned_cols=61 Identities=21% Similarity=0.269 Sum_probs=41.7
Q ss_pred CCCchHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCCCCCCCCCccccC-
Q 033314 19 GMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELL- 97 (122)
Q Consensus 19 GMPSSHSA~v~alat~i~l~~G~~s~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~~~~~~~~lke~l- 97 (122)
.|||.|.+...-.+..+.- .+.....+.+.++++.+++... -..
T Consensus 127 afPSlH~a~a~l~~~~~~~-~~~~~~~~~~~~~~~~~i~~st----------------------------------v~~~ 171 (191)
T PF14378_consen 127 AFPSLHVAWAVLCALALWR-VGRPRWLRALFLAFNVLILFST----------------------------------VYTG 171 (191)
T ss_pred ccCchHHHHHHHHHHHHHH-ccccHHHHHHHHHHHHHHHHHH----------------------------------HHhC
Confidence 7999999986655544433 3333333456777777777651 233
Q ss_pred CCChHHHHHHHHHHHHH
Q 033314 98 GHTPLQVVAGGILGCVV 114 (122)
Q Consensus 98 GHtp~EV~~GallGi~i 114 (122)
+|+..++++|++++.++
T Consensus 172 ~HY~iDv~aG~~la~~~ 188 (191)
T PF14378_consen 172 QHYVIDVIAGAALALLA 188 (191)
T ss_pred cHHHHHHHHHHHHHHHH
Confidence 59999999999998875
No 37
>COG4129 Predicted membrane protein [Function unknown]
Probab=89.61 E-value=0.39 Score=40.57 Aligned_cols=66 Identities=24% Similarity=0.306 Sum_probs=46.2
Q ss_pred CCCchHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCCCCCCCCCccccCC
Q 033314 19 GMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG 98 (122)
Q Consensus 19 GMPSSHSA~v~alat~i~l~~G~~s~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~~~~~~~~lke~lG 98 (122)
|++.-+++..++||..++-.-|++.|.|| .+-|++-+-+ . +..-.
T Consensus 10 g~RtlKt~ia~~La~~ia~~l~~~~~~~A--~i~AV~~l~~--------------------------------t-~~~s~ 54 (332)
T COG4129 10 GARTLKTGLAAGLALLIAHLLGLPQPAFA--GISAVLCLSP--------------------------------T-IKRSL 54 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCchHHH--HHHHhhcccC--------------------------------c-chHHH
Confidence 77888999999999999998888877665 3333333321 0 12224
Q ss_pred CChHHHHHHHHHHHHHHHHHh
Q 033314 99 HTPLQVVAGGILGCVVAFLMR 119 (122)
Q Consensus 99 Htp~EV~~GallGi~ia~~~~ 119 (122)
|+-.+-+.|..+|+++|.+++
T Consensus 55 ~~~~~r~~g~~iG~~~a~l~~ 75 (332)
T COG4129 55 KRALQRLLGNALGAILAVLFF 75 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 666778888888888877654
No 38
>PF14360 PAP2_C: PAP2 superfamily C-terminal
Probab=82.61 E-value=4.9 Score=26.60 Aligned_cols=18 Identities=22% Similarity=0.222 Sum_probs=15.2
Q ss_pred CCChHHHHHHHHHHHHHH
Q 033314 98 GHTPLQVVAGGILGCVVA 115 (122)
Q Consensus 98 GHtp~EV~~GallGi~ia 115 (122)
.|+-.+|+.|.++...+=
T Consensus 52 ~HYTvDV~~a~~it~~~f 69 (74)
T PF14360_consen 52 KHYTVDVVLAYYITSLVF 69 (74)
T ss_pred CCceeehhhHHHHHHHHH
Confidence 599999999998887754
No 39
>PF01219 DAGK_prokar: Prokaryotic diacylglycerol kinase; InterPro: IPR000829 Diacylglycerol kinase (2.7.1.107 from EC) (DAGK) is an enzyme that catalyses the formation of phosphatidic acid from diacylglycerol and ATP, an important step in phospholipid biosynthesis. In bacteria DAGK is very small (13 to 15 kD) membrane protein which seems to contain three transmembrane domains []. The best conserved region, is a stretch of 12 residues which are located in a cytoplasmic loop between the second and third transmembrane domains.; GO: 0004143 diacylglycerol kinase activity, 0008654 phospholipid biosynthetic process, 0016020 membrane; PDB: 2KDC_B.
Probab=75.12 E-value=12 Score=26.58 Aligned_cols=44 Identities=20% Similarity=0.287 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHhccCccHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCC
Q 033314 27 TVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFP 82 (122)
Q Consensus 27 ~v~alat~i~l~~G~~s~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~ 82 (122)
.+..+....++..|.+.....+-..-.+.|+ -++.+|.-+|.+-
T Consensus 23 ~~~~~v~~~~~~l~~s~~ew~~li~~~~~Vl------------~~EllNTAIE~~v 66 (104)
T PF01219_consen 23 VAAVLVLIAAFFLGLSPWEWALLILAIFLVL------------IAELLNTAIERLV 66 (104)
T ss_dssp HHHHHHHHHHHH-----SHHHHHHHHHHHHH------------HHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHHHH------------HHHHHHHHHHHHH
Confidence 3455666777777877766665554444555 4799999999774
No 40
>COG4803 Predicted membrane protein [Function unknown]
Probab=65.28 E-value=4.5 Score=31.41 Aligned_cols=31 Identities=26% Similarity=0.435 Sum_probs=26.3
Q ss_pred CCCccccCCCChHHHHHHHHHHHHHHHHHhc
Q 033314 90 VRPLRELLGHTPLQVVAGGILGCVVAFLMRN 120 (122)
Q Consensus 90 ~~~lke~lGHtp~EV~~GallGi~ia~~~~~ 120 (122)
+.++|...--|-.-.+.|+++|.+|+++++|
T Consensus 48 kvklkQ~~Nlt~aGa~sGafWG~LiGllFl~ 78 (170)
T COG4803 48 KVKLKQLMNLTGAGAVSGAFWGMLIGLLFLN 78 (170)
T ss_pred CeeHHHHhhhhhhccccccHHHHHHHHHHHh
Confidence 3467888777888888999999999999987
No 41
>TIGR00827 EIIC-GAT PTS system, galactitol-specific IIC component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The only characterized member of this family of PTS transporters is the E. coli galactitol transporter. Gat family PTS systems typically have 3 components: IIA, IIB and IIC. This family is specific for the IIC component of the PTS Gat family.
Probab=62.49 E-value=8.9 Score=33.54 Aligned_cols=48 Identities=21% Similarity=0.309 Sum_probs=32.8
Q ss_pred HHHHHHHhhhCCCC-CCCCCCCCccccCCCChHHHHHHHHHHHHHHHHH
Q 033314 71 AELLNQIVCEFPPD-HPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLM 118 (122)
Q Consensus 71 a~~lN~l~~~~~~~-~~~~~~~~lke~lGHtp~EV~~GallGi~ia~~~ 118 (122)
+..+|+++++++.- +.+.+.+++||+.|==-.-.+.|.++|++++++.
T Consensus 183 a~~~n~i~dkIPglnki~~d~~~i~kk~GifGep~viG~iiG~~lGila 231 (407)
T TIGR00827 183 IVLVDAIIEKIPGIKHWNADADTIQRRFGIFGEPVFIGLVLGLIIGLLA 231 (407)
T ss_pred HHHHHHHHHhCcCcccCCCCHHHHhhhheeccchHHHHHHHHHHHHHHh
Confidence 45688999988532 2223345688999933333888999999988764
No 42
>PF10066 DUF2304: Uncharacterized conserved protein (DUF2304); InterPro: IPR019277 This entry represents hypothetical archaeal and bacterial proteins that have no known function.
Probab=56.02 E-value=12 Score=26.39 Aligned_cols=52 Identities=12% Similarity=0.290 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHhccCccHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCC
Q 033314 27 TVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFP 82 (122)
Q Consensus 27 ~v~alat~i~l~~G~~s~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~ 82 (122)
....+|..+|+.+| .+.+|.++.++-+++++.- =....+|.+-+++|.+++.
T Consensus 52 ~~~~vA~~lGi~~~-~n~lf~~~i~~ll~~~~~l---~~~is~le~~i~~L~qeiA 103 (115)
T PF10066_consen 52 ILDWVAKLLGIGRP-PNLLFYLGILFLLVIIFSL---YVRISRLEEKIKRLAQEIA 103 (115)
T ss_pred HHHHHHHHHCCCch-hHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
Confidence 34455556666666 3456666666666666652 2345667778888888773
No 43
>PF06081 DUF939: Bacterial protein of unknown function (DUF939); InterPro: IPR010343 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=55.74 E-value=16 Score=26.68 Aligned_cols=36 Identities=28% Similarity=0.281 Sum_probs=24.3
Q ss_pred chHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHh
Q 033314 22 SSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYD 59 (122)
Q Consensus 22 SSHSA~v~alat~i~l~~G~~s~~fala~~~A~IVmyD 59 (122)
.--++..++++..++-.-+.+.|.+ +.+-|.+.|.|
T Consensus 7 ~iKtaiA~~la~~ia~~l~~~~~~~--A~i~Ail~~q~ 42 (141)
T PF06081_consen 7 TIKTAIAAFLAILIAQLLGLQYPFF--APIAAILSMQP 42 (141)
T ss_pred HHHHHHHHHHHHHHHHHHCCCchHH--HHHHHhheeeh
Confidence 3446777888888887777665544 46667777755
No 44
>PF10261 Scs3p: Inositol phospholipid synthesis and fat-storage-inducing TM; InterPro: IPR019388 This entry represents the fat storage-inducing transmembrane (FIT) family of proteins, which play an important role in lipid droplet accumulation. They are endoplasmic reticulum resident membrane proteins that induce lipid droplet accumulation in cell culture and when expressed in mouse liver []; they mediate the partitioning of triglyceride from the ER into cytosolic fatty droplets by an as-yet undetermined mechanism. The FIT family of proteins are not involved in triglyceride biosynthesis []. FIT1 and FIT2 proteins are six-transmembrane-domain containing proteins with both the N and C termini residing in the cytosol. FIT2 is the more anciently conserved homologue of the FIT family; this family of proteins do not share sequence similarity to known proteins or domains.
Probab=55.06 E-value=8 Score=30.87 Aligned_cols=21 Identities=24% Similarity=0.419 Sum_probs=18.6
Q ss_pred CChHHHHHHHHHHHHHHHHHh
Q 033314 99 HTPLQVVAGGILGCVVAFLMR 119 (122)
Q Consensus 99 Htp~EV~~GallGi~ia~~~~ 119 (122)
||+.|=+.|.++|.++-++.|
T Consensus 218 HT~~EKl~Gl~~g~~~~~~~Y 238 (238)
T PF10261_consen 218 HTILEKLSGLLFGYLGWYITY 238 (238)
T ss_pred CCHHHHHHHHHHHHHhheeeC
Confidence 999999999999999877765
No 45
>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane
Probab=53.41 E-value=27 Score=30.59 Aligned_cols=21 Identities=19% Similarity=0.330 Sum_probs=17.4
Q ss_pred CChHHHHHHHHHHHHHHHHHh
Q 033314 99 HTPLQVVAGGILGCVVAFLMR 119 (122)
Q Consensus 99 Htp~EV~~GallGi~ia~~~~ 119 (122)
+-..|++.|++.+.++..+++
T Consensus 130 ~R~~ei~iGi~~a~~v~~l~~ 150 (650)
T PF04632_consen 130 WRVLEILIGILCATLVSMLFF 150 (650)
T ss_pred HHHHHHHHHHHHHHHHHHHhC
Confidence 556899999999999888765
No 46
>PF03611 EIIC-GAT: PTS system sugar-specific permease component; InterPro: IPR004703 This entry represents bacterial transmembrane proteins with a putative sugar-specific permease function, including the IIC component of the PTS system. It has been suggested that this permease may form part of an L-ascorbate utilisation pathway, with proposed specificity for 3-keto-L-gulonate (formed by hydrolysis of L-ascorbate) []. This family includes the IIC component of the galactitol specific GAT family PTS system.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane
Probab=52.81 E-value=18 Score=31.25 Aligned_cols=48 Identities=25% Similarity=0.407 Sum_probs=33.4
Q ss_pred HHHHHHHhhhC-CCCCC-CCCCCCccccCC--CChHHHHHHHHHHHHHHHHHhc
Q 033314 71 AELLNQIVCEF-PPDHP-LSSVRPLRELLG--HTPLQVVAGGILGCVVAFLMRN 120 (122)
Q Consensus 71 a~~lN~l~~~~-~~~~~-~~~~~~lke~lG--Htp~EV~~GallGi~ia~~~~~ 120 (122)
+..+|.+++++ .+.++ ..+++++++++| ..| .+.|+++|++++++...
T Consensus 187 ~~~l~~~i~ki~~~~~k~~~e~~~l~k~lg~~~d~--~v~g~iig~ii~ii~~~ 238 (415)
T PF03611_consen 187 AYWLNWLIGKIFPGKNKISAEPEKLPKKLGFFGDP--MVIGFIIGLIIGIIAGY 238 (415)
T ss_pred HHHHHHHHHhhcCCCCCCCCCHHHHhhhhhHhcCc--HHHHHHHHHHHHHHHHH
Confidence 66788888888 43222 334456788888 444 88899999998877543
No 47
>TIGR02005 PTS-IIBC-alpha PTS system, alpha-glucoside-specific IIBC component. This model represents a family of fused PTS enzyme II B and C domains. A gene from Clostridium has been partially characterized as a maltose transporter, while genes from Fusobacterium and Klebsiella have been proposed to transport the five non-standard isomers of sucrose.
Probab=47.60 E-value=1.2e+02 Score=27.30 Aligned_cols=82 Identities=13% Similarity=0.327 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhCCCCCCCCC-------CCCcccc
Q 033314 24 HSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSS-------VRPLREL 96 (122)
Q Consensus 24 HSA~v~alat~i~l~~G~~s~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~~~~~~~~~-------~~~lke~ 96 (122)
.=...+|+..++|+... ++..-+++.+++.+++.- ++|.+++.......... ..-..+.
T Consensus 64 nLpllFAvgia~Glak~-~kg~Aalaa~v~ylv~~~-------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v 129 (524)
T TIGR02005 64 QMPLIFVVGLPIGLAKK-AQGRACLAALMGYLTFNY-------------FINAILTQWGSSFGVNFTQGVGVGVSGLTSI 129 (524)
T ss_pred cchHHHHHHHHHHhccC-CcHHHHHHHHHHHHHHHH-------------HHHHHHHhcccccccchhhhccccccchhhh
Confidence 33456677777777654 456667888888888754 23333321110000000 0001223
Q ss_pred CCCChHH--HHHHHHHHHHHHHHHh
Q 033314 97 LGHTPLQ--VVAGGILGCVVAFLMR 119 (122)
Q Consensus 97 lGHtp~E--V~~GallGi~ia~~~~ 119 (122)
+|=...+ |++|+++|++++++..
T Consensus 130 lGi~tl~~gVfgGIi~G~i~a~l~N 154 (524)
T TIGR02005 130 AGIKTLDTSIIGAIIISGIITYIHN 154 (524)
T ss_pred cccceecchhHHHHHHHHHHHHHHH
Confidence 4422233 8999999999988753
No 48
>PF11522 Pik1: Yeast phosphatidylinositol-4-OH kinase Pik1; InterPro: IPR021601 Pik1 is a regulator of membrane traffic and participates in the mating-pheromone signal-transduction cascade. The protein is localised to the nucleus and cytoplasm in the Golgi. Pik1 is thought to have an actin-independent role in membrane transport []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 2JU0_B.
Probab=46.89 E-value=24 Score=22.36 Aligned_cols=39 Identities=18% Similarity=0.304 Sum_probs=20.5
Q ss_pred HHHHHHhhhCCCCC--CCCCCCCccccCCCChHHHHHHHHHHH
Q 033314 72 ELLNQIVCEFPPDH--PLSSVRPLRELLGHTPLQVVAGGILGC 112 (122)
Q Consensus 72 ~~lN~l~~~~~~~~--~~~~~~~lke~lGHtp~EV~~GallGi 112 (122)
+++|+|-.-+-..+ +..+.+++||.+ .|.=|++|++++-
T Consensus 9 Rv~NklQ~ilFn~~~~~~~~~~k~~ENv--~PalVL~s~v~as 49 (51)
T PF11522_consen 9 RVINKLQHILFNTSSSDISKQQKFRENV--LPALVLCSAVLAS 49 (51)
T ss_dssp HHHHHHT--SS-SS-----TT--SS-SH--HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCcccccccccccccc--chHHHHHHHHHHh
Confidence 37888877664433 333334566654 5788899988763
No 49
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=42.30 E-value=19 Score=28.17 Aligned_cols=26 Identities=35% Similarity=0.394 Sum_probs=17.1
Q ss_pred ccCCCchHHHHHHHHHHHHHHHhccC
Q 033314 17 SGGMPSSHSATVSALAVAIGLQEGSG 42 (122)
Q Consensus 17 ~GGMPSSHSA~v~alat~i~l~~G~~ 42 (122)
.||||+++|-.-+++....|-...+.
T Consensus 198 ~gg~p~~~s~srs~~~~~~Ga~t~~s 223 (280)
T PF00916_consen 198 FGGMPGSGSFSRSAVNYRAGARTRLS 223 (280)
T ss_pred hcccccccccccchHHHhcCcceeeh
Confidence 37999999876666655555444433
No 50
>COG0472 Rfe UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase [Cell envelope biogenesis, outer membrane]
Probab=40.89 E-value=1.3e+02 Score=25.08 Aligned_cols=25 Identities=24% Similarity=0.410 Sum_probs=22.1
Q ss_pred CCChHHHHHHHHHHHHHHHHHhcCC
Q 033314 98 GHTPLQVVAGGILGCVVAFLMRNSN 122 (122)
Q Consensus 98 GHtp~EV~~GallGi~ia~~~~~~~ 122 (122)
||....+++.+++|...|+++||.+
T Consensus 186 ~~~~~~~~~~al~ga~LGFL~~N~~ 210 (319)
T COG0472 186 GLGELALICAALAGACLGFLWFNFY 210 (319)
T ss_pred cchhHHHHHHHHHHHHHHHHHhcCC
Confidence 4788889999999999999999964
No 51
>PF10389 CoatB: Bacteriophage coat protein B ; InterPro: IPR008020 The major coat protein in the capsid of filamentous bacteriophage forms a helical assembly of about 7000 identical protomers, with each protomer comprised of 46 amino acids, after the cleavage of the signal peptide. Each protomer forms a slightly curved helix that combines to form a tubular structure that encapsulates the viral DNA [].; PDB: 2IFO_A.
Probab=39.28 E-value=33 Score=21.35 Aligned_cols=22 Identities=23% Similarity=0.558 Sum_probs=19.0
Q ss_pred CChHHHHHHHHHHHHHHHHHhc
Q 033314 99 HTPLQVVAGGILGCVVAFLMRN 120 (122)
Q Consensus 99 Htp~EV~~GallGi~ia~~~~~ 120 (122)
-++.--++|++|+++++...|+
T Consensus 19 ~t~i~~ig~avL~v~V~i~v~k 40 (46)
T PF10389_consen 19 KTDIATIGGAVLGVIVGIAVYK 40 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHH
Confidence 4677789999999999998886
No 52
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=36.82 E-value=37 Score=24.99 Aligned_cols=18 Identities=17% Similarity=0.534 Sum_probs=15.3
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 033314 101 PLQVVAGGILGCVVAFLM 118 (122)
Q Consensus 101 p~EV~~GallGi~ia~~~ 118 (122)
-.|.++|.++|..++++.
T Consensus 49 ssefIsGilVGa~iG~ll 66 (116)
T COG5336 49 SSEFISGILVGAGIGWLL 66 (116)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 478999999999999873
No 53
>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane
Probab=35.89 E-value=1.3e+02 Score=26.33 Aligned_cols=21 Identities=33% Similarity=0.504 Sum_probs=15.4
Q ss_pred CChHHHHHHHHHHHHHHHHHh
Q 033314 99 HTPLQVVAGGILGCVVAFLMR 119 (122)
Q Consensus 99 Htp~EV~~GallGi~ia~~~~ 119 (122)
+....++.|+++|.++|++++
T Consensus 387 ~~~~~~~~G~l~~~~~a~~~~ 407 (650)
T PF04632_consen 387 PALRLFLIGALLGAVLAFLYL 407 (650)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 345678888888888887654
No 54
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=35.16 E-value=23 Score=31.27 Aligned_cols=22 Identities=18% Similarity=0.238 Sum_probs=14.2
Q ss_pred ccCCCchHHHHHHHHHHHHHHH
Q 033314 17 SGGMPSSHSATVSALAVAIGLQ 38 (122)
Q Consensus 17 ~GGMPSSHSA~v~alat~i~l~ 38 (122)
-||||.+||..-+++....|-.
T Consensus 310 fg~~p~~~s~srs~~~~~~G~~ 331 (563)
T TIGR00815 310 FSCYPATGSLSRTAVNAKAGCR 331 (563)
T ss_pred hCccCCCCcchHHHHHHhcCCc
Confidence 4899999887665554444333
No 55
>KOG4692 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=34.93 E-value=81 Score=27.93 Aligned_cols=55 Identities=24% Similarity=0.363 Sum_probs=38.6
Q ss_pred ccchhhhhhHhHHHHHHHhhhCCCCCCCC------CCCCccccCCCChHHHHHHHHHHHHHHHHH
Q 033314 60 ASGVRLHAGRQAELLNQIVCEFPPDHPLS------SVRPLRELLGHTPLQVVAGGILGCVVAFLM 118 (122)
Q Consensus 60 A~gVRr~aG~qa~~lN~l~~~~~~~~~~~------~~~~lke~lGHtp~EV~~GallGi~ia~~~ 118 (122)
...-||-..+-+++|||+......+.... ..++ -|.+-|+|+ .-+++||++.++.
T Consensus 264 rpns~~Ll~ri~qllnqvlsrVt~e~~lf~rvv~~~~~~-le~V~hypi---l~a~~GIll~Ll~ 324 (489)
T KOG4692|consen 264 RPNSRRLLERILQLLNQVLSRVTDEFFLFVRVVRRQGQP-LEKVSHYPI---LAALVGILLNLLE 324 (489)
T ss_pred CCcHHHHHHHHHHHHHHHHHhhccccchhHHHHHhhcCC-hhhhcccch---HHHHHHHHHHHHH
Confidence 45778999999999999988775443211 1123 378899984 4578888887764
No 56
>COG1289 Predicted membrane protein [Function unknown]
Probab=33.61 E-value=1.3e+02 Score=27.17 Aligned_cols=31 Identities=23% Similarity=0.161 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHhccCccHHHHHHHHHHHHH
Q 033314 25 SATVSALAVAIGLQEGSGSPSFAIAVVLACIVM 57 (122)
Q Consensus 25 SA~v~alat~i~l~~G~~s~~fala~~~A~IVm 57 (122)
++.+.+++..++...||.....+ +..+++|+
T Consensus 361 ~ala~~~~~~~~~~~~w~~g~w~--llt~~vV~ 391 (674)
T COG1289 361 TALALLLGYAFWLALGWPHGYWI--LLTAAVVC 391 (674)
T ss_pred HHHHHHHHHHHHHHhcCCccHHH--HHHHHHHc
Confidence 45666667777777888754443 34445555
No 57
>PF05525 Branch_AA_trans: Branched-chain amino acid transport protein; InterPro: IPR004685 Characterised members of the branched chain Amino Acid:Cation Symporter (LIVCS) family transport all three of the branched chain aliphatic amino acids (leucine (L), isoleucine (I) and valine (V)). They function by a Na+ or H+ symport mechanism and display 12 putative transmembrane helical spanners.; GO: 0015658 branched-chain aliphatic amino acid transmembrane transporter activity, 0015803 branched-chain aliphatic amino acid transport, 0016021 integral to membrane
Probab=33.28 E-value=1.7e+02 Score=25.65 Aligned_cols=31 Identities=16% Similarity=0.200 Sum_probs=26.3
Q ss_pred HHHHHHHHHHhccCccHHHHHHHHHHHHHHh
Q 033314 29 SALAVAIGLQEGSGSPSFAIAVVLACIVMYD 59 (122)
Q Consensus 29 ~alat~i~l~~G~~s~~fala~~~A~IVmyD 59 (122)
..-+..-|+.||+++..-.-+++|+.+|+.+
T Consensus 178 ~~~~f~~Gf~eGY~TMD~laal~Fg~iIi~~ 208 (427)
T PF05525_consen 178 ASNPFFKGFLEGYQTMDALAALAFGIIIINA 208 (427)
T ss_pred hhhHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 4556678999999998888899999999966
No 58
>PRK11660 putative transporter; Provisional
Probab=30.88 E-value=55 Score=29.03 Aligned_cols=19 Identities=26% Similarity=0.331 Sum_probs=11.6
Q ss_pred ccCCCchHHHHHHHHHHHH
Q 033314 17 SGGMPSSHSATVSALAVAI 35 (122)
Q Consensus 17 ~GGMPSSHSA~v~alat~i 35 (122)
.||||.+++-.-+++....
T Consensus 330 fgg~p~~~s~srSa~n~~a 348 (568)
T PRK11660 330 FGGITATAAIARSAANVRA 348 (568)
T ss_pred hCcccccchHHHHHHHHhc
Confidence 3899988875444444333
No 59
>COG4575 ElaB Uncharacterized conserved protein [Function unknown]
Probab=30.73 E-value=43 Score=24.20 Aligned_cols=26 Identities=12% Similarity=0.218 Sum_probs=19.4
Q ss_pred cccCC-CChHHHHHHHHHHHHHHHHHh
Q 033314 94 RELLG-HTPLQVVAGGILGCVVAFLMR 119 (122)
Q Consensus 94 ke~lG-Htp~EV~~GallGi~ia~~~~ 119 (122)
-+|++ |-+--|-.|+.+|+++|+++-
T Consensus 76 D~yV~e~PWq~VGvaAaVGlllGlLls 102 (104)
T COG4575 76 DDYVRENPWQGVGVAAAVGLLLGLLLS 102 (104)
T ss_pred HHHHHcCCchHHHHHHHHHHHHHHHHh
Confidence 36777 555557789999999998763
No 60
>COG3775 GatC Phosphotransferase system, galactitol-specific IIC component [Carbohydrate transport and metabolism]
Probab=30.51 E-value=49 Score=29.39 Aligned_cols=46 Identities=22% Similarity=0.313 Sum_probs=31.1
Q ss_pred HHHHHhhhCCCCCC-CCCCCCccccCCCChHHHHHHHHHHHHHHHHH
Q 033314 73 LLNQIVCEFPPDHP-LSSVRPLRELLGHTPLQVVAGGILGCVVAFLM 118 (122)
Q Consensus 73 ~lN~l~~~~~~~~~-~~~~~~lke~lGHtp~EV~~GallGi~ia~~~ 118 (122)
.+++++|+++.-+. ..+.++++.+.|---.-++.|.++|+++|.+.
T Consensus 195 ~~dkii~KiPgl~k~~~Da~~iqkk~G~fGep~~iG~ilG~~iGila 241 (446)
T COG3775 195 LLDKIIEKIPGLNKIDFDAETIQKKFGIFGEPMFIGFILGLLIGILA 241 (446)
T ss_pred hHHHHHHhCcCccccCCCHHHHHhhhcCccchhHHHHHHHHHHHHHc
Confidence 46777777653322 22334677788855455899999999998763
No 61
>PRK14654 mraY phospho-N-acetylmuramoyl-pentapeptide-transferase; Provisional
Probab=28.60 E-value=3.1e+02 Score=22.71 Aligned_cols=24 Identities=25% Similarity=0.092 Sum_probs=19.6
Q ss_pred CCChHHHHHHHHHHHHHHHHHhcC
Q 033314 98 GHTPLQVVAGGILGCVVAFLMRNS 121 (122)
Q Consensus 98 GHtp~EV~~GallGi~ia~~~~~~ 121 (122)
++...+.++.++.|.++++++||.
T Consensus 176 ~~~~~~~~~~~l~gallGFL~~N~ 199 (302)
T PRK14654 176 ERGVSEDILLILGAGVLAFLVFNS 199 (302)
T ss_pred cccHHHHHHHHHHHHHHHHHhhcC
Confidence 556667778889999999999986
No 62
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=26.60 E-value=3.4e+02 Score=21.78 Aligned_cols=34 Identities=24% Similarity=0.245 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHhccCcc-HHH--HHHHHHHH-HHHh
Q 033314 26 ATVSALAVAIGLQEGSGSP-SFA--IAVVLACI-VMYD 59 (122)
Q Consensus 26 A~v~alat~i~l~~G~~s~-~fa--la~~~A~I-VmyD 59 (122)
+.+++++.+.++...++.+ +.+ ++++|+++ .++|
T Consensus 26 a~la~~s~~~a~~~~~~~~~~~ai~~glvwgl~I~~lD 63 (301)
T PF14362_consen 26 ALLAGLSGGYALYTVFGGPVWAAIPFGLVWGLVIFNLD 63 (301)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 4444555555555555544 222 44455444 4455
No 63
>PF04284 DUF441: Protein of unknown function (DUF441); InterPro: IPR007382 This entry contains proteins of unknown function. They are predicted to be transmembrane proteins with 4 TM domains.
Probab=26.46 E-value=54 Score=24.80 Aligned_cols=19 Identities=21% Similarity=0.457 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 033314 102 LQVVAGGILGCVVAFLMRN 120 (122)
Q Consensus 102 ~EV~~GallGi~ia~~~~~ 120 (122)
+|+..|.++|.++|..+++
T Consensus 105 P~v~~gLviGTIiGV~ff~ 123 (140)
T PF04284_consen 105 PQVIVGLVIGTIIGVAFFK 123 (140)
T ss_pred ChhhHHHHHHHHHHHHHcC
Confidence 7999999999999998875
No 64
>COG3004 NhaA Na+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=25.20 E-value=2.6e+02 Score=24.48 Aligned_cols=46 Identities=28% Similarity=0.359 Sum_probs=23.9
Q ss_pred CCchHHHHHHHHHH--------HHHHHh--ccCccHHHHH-HHHHHHHHHhccchhh
Q 033314 20 MPSSHSATVSALAV--------AIGLQE--GSGSPSFAIA-VVLACIVMYDASGVRL 65 (122)
Q Consensus 20 MPSSHSA~v~alat--------~i~l~~--G~~s~~fala-~~~A~IVmyDA~gVRr 65 (122)
-|+|---+..+||. .|++.| +.+...+..+ .+++.+.+....||||
T Consensus 151 VP~sLKiFLlaLAI~DDlgAIvIIAlFYt~~Ls~~al~~a~~~i~vL~~lN~~~v~~ 207 (390)
T COG3004 151 VPLSLKIFLLALAIIDDLGAIVIIALFYTTDLSMAALGIAALAIAVLAVLNRLGVRR 207 (390)
T ss_pred CChHHHHHHHHHHHHhhcchhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHhCchh
Confidence 35555555666654 233333 3444444433 3355556667777776
No 65
>PF11654 DUF2665: Protein of unknown function (DUF2665); InterPro: IPR024242 This entry represents the non classical export protein 1 family. Family members are Involved in a novel pathway of export of proteins that lack a cleavable signal sequence [].; GO: 0009306 protein secretion
Probab=24.79 E-value=74 Score=19.88 Aligned_cols=19 Identities=21% Similarity=0.363 Sum_probs=14.4
Q ss_pred cCccHHHHHHHHHHHHHHh
Q 033314 41 SGSPSFAIAVVLACIVMYD 59 (122)
Q Consensus 41 ~~s~~fala~~~A~IVmyD 59 (122)
+-+|+|++..-.+.-..|-
T Consensus 6 ~lDP~~av~iG~~ayyl~e 24 (47)
T PF11654_consen 6 FLDPLFAVFIGTSAYYLYE 24 (47)
T ss_pred hhhhHHHHHHHHHHHHHHH
Confidence 4578898888777777774
No 66
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=24.45 E-value=3.4e+02 Score=21.13 Aligned_cols=23 Identities=26% Similarity=0.452 Sum_probs=13.8
Q ss_pred cCCCChHHHHHHHHHHHHHHHHH
Q 033314 96 LLGHTPLQVVAGGILGCVVAFLM 118 (122)
Q Consensus 96 ~lGHtp~EV~~GallGi~ia~~~ 118 (122)
.+|....=.++|.++|.++|.++
T Consensus 138 ~~~rA~~~~~~~L~~G~~lGs~l 160 (194)
T PF11833_consen 138 KLGRAFLWTLGGLVVGLILGSLL 160 (194)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555566666666666666543
No 67
>PRK11427 multidrug efflux system protein MdtO; Provisional
Probab=23.92 E-value=2.6e+02 Score=26.26 Aligned_cols=16 Identities=25% Similarity=0.538 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHH
Q 033314 102 LQVVAGGILGCVVAFL 117 (122)
Q Consensus 102 ~EV~~GallGi~ia~~ 117 (122)
.+-+.|.++|.++|++
T Consensus 399 ~~RiiGTliGallA~l 414 (683)
T PRK11427 399 VLRFGGAFCGAILALL 414 (683)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4556777777776554
No 68
>PF01034 Syndecan: Syndecan domain; InterPro: IPR001050 The syndecans are transmembrane proteoglycans which are involved in the organisation of cytoskeleton and/or actin microfilaments, and have important roles as cell surface receptors during cell-cell and/or cell-matrix interactions [, ]. Structurally, these proteins consist of four separate domains: A signal sequence; An extracellular domain (ectodomain) of variable length whose sequence is not evolutionary conserved in the various forms of syndecans. The ectodomain contains the sites of attachment of the heparan sulphate glycosaminoglycan side chains; A transmembrane region; A highly conserved cytoplasmic domain of about 30 to 35 residues, which could interact with cytoskeletal proteins. The proteins known to belong to this family are: Syndecan 1. Syndecan 2 or fibroglycan. Syndecan 3 or neuroglycan or N-syndecan. Syndecan 4 or amphiglycan or ryudocan. Drosophila syndecan. Caenorhabditis elegans probable syndecan (F57C7.3). Syndecan-4, a transmembrane heparan sulphate proteoglycan, is a coreceptor with integrins in cell adhesion. It has been suggested to form a ternary signalling complex with protein kinase Calpha and phosphatidylinositol 4,5-bisphosphate (PIP2). Structural studies have demonstrated that the cytoplasmic domain undergoes a conformational transition and forms a symmetric dimer in the presence of phospholipid activator PIP2, and whose overall structure in solution exhibits a twisted clamp shape having a cavity in the centre of dimeric interface. In addition, it has been observed that the syndecan-4 variable domain interacts, strongly, not only with fatty acyl groups but also the anionic head group of PIP2. These findings indicate that PIP2 promotes oligomerisation of the syndecan-4 cytoplasmic domain for transmembrane signalling and cell-matrix adhesion [, ].; GO: 0008092 cytoskeletal protein binding, 0016020 membrane; PDB: 1EJQ_B 1EJP_B 1YBO_C 1OBY_Q.
Probab=23.85 E-value=26 Score=23.28 Aligned_cols=13 Identities=46% Similarity=0.958 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHH
Q 033314 104 VVAGGILGCVVAF 116 (122)
Q Consensus 104 V~~GallGi~ia~ 116 (122)
+++|+++|+++++
T Consensus 14 vIaG~Vvgll~ai 26 (64)
T PF01034_consen 14 VIAGGVVGLLFAI 26 (64)
T ss_dssp -------------
T ss_pred HHHHHHHHHHHHH
Confidence 4444455554444
No 69
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=23.65 E-value=2.6e+02 Score=26.80 Aligned_cols=20 Identities=25% Similarity=0.642 Sum_probs=15.9
Q ss_pred CChHHHHHHHHHHHHHHHHH
Q 033314 99 HTPLQVVAGGILGCVVAFLM 118 (122)
Q Consensus 99 Htp~EV~~GallGi~ia~~~ 118 (122)
+-..|+++|+++|+++|++.
T Consensus 207 ~~L~~i~~GiliG~vvG~l~ 226 (810)
T TIGR00844 207 TILWECIFGSILGCIIGYCG 226 (810)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44578899999999998864
No 70
>PF04286 DUF445: Protein of unknown function (DUF445); InterPro: IPR007383 This entry contains proteins of unknown function. They are predicted to be transmembrane proteins with 2 or 3 TM domains.
Probab=23.07 E-value=58 Score=26.00 Aligned_cols=15 Identities=27% Similarity=0.665 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHHHh
Q 033314 105 VAGGILGCVVAFLMR 119 (122)
Q Consensus 105 ~~GallGi~ia~~~~ 119 (122)
+-|+++|.++|++.|
T Consensus 347 inGallG~liG~~~~ 361 (367)
T PF04286_consen 347 INGALLGGLIGLLQY 361 (367)
T ss_pred hhhHHHHHHHHHHHH
Confidence 347777777777655
No 71
>PRK10631 p-hydroxybenzoic acid efflux subunit AaeB; Provisional
Probab=22.38 E-value=2.5e+02 Score=26.06 Aligned_cols=31 Identities=29% Similarity=0.366 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHhccCccHHHHHHHHHHHHH
Q 033314 25 SATVSALAVAIGLQEGSGSPSFAIAVVLACIVM 57 (122)
Q Consensus 25 SA~v~alat~i~l~~G~~s~~fala~~~A~IVm 57 (122)
+.+...+|..+++.-+++.|.++..- +.||+
T Consensus 15 ~~lA~~LAL~ia~~l~L~~P~WA~~T--v~iv~ 45 (652)
T PRK10631 15 LAFAIVLALFVGFHFQLETPRWAVLT--AAIVA 45 (652)
T ss_pred HHHHHHHHHHHHHHCCCCCccHHHHH--HHHHH
Confidence 45677788888888899999887544 35665
No 72
>PF10779 XhlA: Haemolysin XhlA; InterPro: IPR019715 Haemolysin XhlA is a cell-surface associated haemolysin that lyses the two most prevalent types of insect immune cells (granulocytes and plasmatocytes) as well as rabbit and horse erythrocytes [].
Probab=22.16 E-value=91 Score=20.18 Aligned_cols=15 Identities=13% Similarity=0.598 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHHHH
Q 033314 104 VVAGGILGCVVAFLM 118 (122)
Q Consensus 104 V~~GallGi~ia~~~ 118 (122)
.+.|++++.++++++
T Consensus 56 ~iiGaiI~~i~~~i~ 70 (71)
T PF10779_consen 56 TIIGAIITAIIYLII 70 (71)
T ss_pred HHHHHHHHHHHHHHh
Confidence 556666666666554
No 73
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=21.61 E-value=1.1e+02 Score=18.56 Aligned_cols=24 Identities=25% Similarity=0.522 Sum_probs=19.7
Q ss_pred cccCCCChHHHHHHHHHHHHHHHH
Q 033314 94 RELLGHTPLQVVAGGILGCVVAFL 117 (122)
Q Consensus 94 ke~lGHtp~EV~~GallGi~ia~~ 117 (122)
.+..|.+|.=.+.|.++|++.++.
T Consensus 25 D~~~~t~p~~~~~g~llG~~~g~~ 48 (55)
T PF09527_consen 25 DKWFGTSPWFTLIGLLLGIAAGFY 48 (55)
T ss_pred HHHcCCChHHHHHHHHHHHHHHHH
Confidence 456677799999999999998864
No 74
>COG1114 BrnQ Branched-chain amino acid permeases [Amino acid transport and metabolism]
Probab=21.41 E-value=1.2e+02 Score=26.85 Aligned_cols=44 Identities=16% Similarity=0.233 Sum_probs=33.7
Q ss_pred cccccCCCchHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHH
Q 033314 14 MLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVM 57 (122)
Q Consensus 14 ~~~~GGMPSSHSA~v~alat~i~l~~G~~s~~fala~~~A~IVm 57 (122)
++...|.|+.-+..-..-+..-|+.||+++....-|++|+.||+
T Consensus 165 ~~~p~g~~~~a~~~y~~~pf~~GfleGY~TMDaLAal~FgivIv 208 (431)
T COG1114 165 IIPPAGPISAASGAYQSQPFSKGFLEGYLTMDALAALAFGIVIV 208 (431)
T ss_pred HhCCCCCcccccHHHHhChHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 44556666654555555778899999999888888899999988
No 75
>PRK03557 zinc transporter ZitB; Provisional
Probab=21.40 E-value=2.4e+02 Score=23.05 Aligned_cols=32 Identities=9% Similarity=0.127 Sum_probs=22.5
Q ss_pred HHhccCccHHHHHHHHHHHHHHhccchhhhhh
Q 033314 37 LQEGSGSPSFAIAVVLACIVMYDASGVRLHAG 68 (122)
Q Consensus 37 l~~G~~s~~fala~~~A~IVmyDA~gVRr~aG 68 (122)
...|+...--..+++++++++|.+..+=|++.
T Consensus 178 ~~~g~~~~Dpi~~ilis~~i~~~~~~l~~~~~ 209 (312)
T PRK03557 178 IWTGWTPADPILSILVSVLVLRSAWRLLKESV 209 (312)
T ss_pred HHcCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34576544456788999999998877656553
No 76
>PF09600 Cyd_oper_YbgE: Cyd operon protein YbgE (Cyd_oper_YbgE); InterPro: IPR011846 This entry describes a small protein of unknown function, about 100 amino acids in length, essentially always found in an operon with CydAB, subunits of the cytochrome d terminal oxidase. It appears to be an integral membrane protein. It is found so far only in the Proteobacteria [].
Probab=21.07 E-value=1.6e+02 Score=20.19 Aligned_cols=15 Identities=40% Similarity=0.669 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHHh
Q 033314 45 SFAIAVVLACIVMYD 59 (122)
Q Consensus 45 ~fala~~~A~IVmyD 59 (122)
.|.+++.++..++.|
T Consensus 6 SlilAl~la~~v~~~ 20 (82)
T PF09600_consen 6 SLILALALAACVFWD 20 (82)
T ss_pred HHHHHHHHHHHHHcC
Confidence 467888899999988
No 77
>PRK14405 membrane protein; Provisional
Probab=20.47 E-value=4.3e+02 Score=20.72 Aligned_cols=50 Identities=6% Similarity=0.055 Sum_probs=26.6
Q ss_pred chHHHHHHHHHHHHH-HHhccCccHHHHHHHHHHHHHHhccchhhhhhHhHHHHHHHhhhC
Q 033314 22 SSHSATVSALAVAIG-LQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEF 81 (122)
Q Consensus 22 SSHSA~v~alat~i~-l~~G~~s~~fala~~~A~IVmyDA~gVRr~aG~qa~~lN~l~~~~ 81 (122)
+|-++.+++++..+. +..+.+.+....++++++++.|. |-+=+.++.+.-
T Consensus 141 vSl~si~~~~~~~~~~~~~~~~~~~~~~~~~l~~lvi~r----------Hr~NI~rl~~g~ 191 (202)
T PRK14405 141 VSLGSLLFVTLTPVLLYIFDYPIPYIWLSLIIAIFAFWR----------HRTNIVRLLSGT 191 (202)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH----------HHHHHHHHHcCC
Confidence 355556555554443 33332222334456677777774 666666666543
No 78
>PRK07373 DNA polymerase III subunit alpha; Reviewed
Probab=20.11 E-value=1.3e+02 Score=26.40 Aligned_cols=35 Identities=11% Similarity=0.156 Sum_probs=26.5
Q ss_pred ccccccCCCchHHHHHHHHHHHHHHHhccCccHHH
Q 033314 13 KMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFA 47 (122)
Q Consensus 13 ~~~~~GGMPSSHSA~v~alat~i~l~~G~~s~~fa 47 (122)
.+|...||+=|||+.-+=+|--.++..-..+..|.
T Consensus 31 ~~~A~YGFNKSHSaAYA~iaYqtAYLKahYP~EFm 65 (449)
T PRK07373 31 GLIASNCFNKSHSTAYAYVTYQTAYLKANYPVEYM 65 (449)
T ss_pred CceEecCCcHHHHHHHHHHHHHHHHHhhccHHHHH
Confidence 37899999999999888877777776654444443
No 79
>PF13544 N_methyl_2: Type IV pilin N-term methylation site GFxxxE; PDB: 3SOK_A 2HIL_L 1AY2_A 2PIL_A 2HI2_A 1OQW_A.
Probab=20.08 E-value=1.2e+02 Score=16.76 Aligned_cols=21 Identities=14% Similarity=0.259 Sum_probs=11.7
Q ss_pred cccCCCChHHHHHHHHHHHHH
Q 033314 94 RELLGHTPLQVVAGGILGCVV 114 (122)
Q Consensus 94 ke~lGHtp~EV~~GallGi~i 114 (122)
+..-|=|..|++...+++.++
T Consensus 11 ~~~~GFTLiEllVa~~I~~il 31 (31)
T PF13544_consen 11 RRQRGFTLIELLVAMAILAIL 31 (31)
T ss_dssp -------HHHHHHHHHHHHHH
T ss_pred cccCCccHHHHHHHHHHHHHC
Confidence 556699999999998887653
Done!