Query 033333
Match_columns 121
No_of_seqs 110 out of 1492
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 21:04:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033333.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033333hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i7u_A AP4A hydrolase; nudix p 99.9 2.2E-24 7.5E-29 135.9 11.5 103 1-105 27-131 (134)
2 3u53_A BIS(5'-nucleosyl)-tetra 99.9 2.1E-22 7E-27 129.2 10.3 105 1-106 38-145 (155)
3 2pbt_A AP4A hydrolase; nudix p 99.9 1.6E-21 5.5E-26 121.7 11.5 103 1-105 27-131 (134)
4 1vcd_A NDX1; nudix protein, di 99.9 3.4E-21 1.2E-25 119.1 12.3 99 1-103 26-124 (126)
5 1ktg_A Diadenosine tetraphosph 99.9 4.8E-21 1.7E-25 120.1 12.0 101 1-104 32-136 (138)
6 3son_A Hypothetical nudix hydr 99.8 1.3E-20 4.4E-25 119.8 11.2 106 1-106 33-144 (149)
7 2b0v_A Nudix hydrolase; struct 99.8 2E-20 6.8E-25 119.1 11.7 99 1-100 35-137 (153)
8 3i9x_A MUTT/nudix family prote 99.8 2.9E-21 1E-25 127.4 6.1 106 1-107 69-176 (187)
9 3gg6_A Nudix motif 18, nucleos 99.8 1.7E-20 5.7E-25 120.1 8.4 101 1-107 48-151 (156)
10 3fcm_A Hydrolase, nudix family 99.8 3.6E-20 1.2E-24 123.1 10.3 108 1-108 71-189 (197)
11 3exq_A Nudix family hydrolase; 99.8 2.5E-20 8.6E-25 120.2 7.8 98 1-101 39-136 (161)
12 2o1c_A DATP pyrophosphohydrola 99.8 1.8E-20 6E-25 118.7 6.8 100 1-102 36-148 (150)
13 3gwy_A Putative CTP pyrophosph 99.8 6.3E-20 2.1E-24 115.6 9.3 97 1-102 36-132 (140)
14 3shd_A Phosphatase NUDJ; nudix 99.8 1.3E-19 4.3E-24 115.6 10.7 99 1-101 31-132 (153)
15 4dyw_A MUTT/nudix family prote 99.8 3.2E-20 1.1E-24 119.3 7.8 97 1-99 56-153 (157)
16 3grn_A MUTT related protein; s 99.8 1.2E-19 4.1E-24 115.8 10.0 100 1-104 38-138 (153)
17 3gz5_A MUTT/nudix family prote 99.8 2.5E-20 8.6E-25 127.6 7.2 106 1-107 53-160 (240)
18 2yyh_A MUTT domain, 8-OXO-DGTP 99.8 4.2E-20 1.4E-24 116.2 7.6 96 1-101 39-136 (139)
19 3q1p_A Phosphohydrolase (MUTT/ 99.8 4E-20 1.4E-24 123.8 7.4 105 1-107 92-199 (205)
20 2azw_A MUTT/nudix family prote 99.8 4.2E-19 1.4E-23 112.3 11.7 99 1-101 43-145 (148)
21 1sjy_A MUTT/nudix family prote 99.8 5.7E-19 1.9E-23 113.0 12.4 88 1-90 45-134 (159)
22 3o8s_A Nudix hydrolase, ADP-ri 99.8 3.9E-20 1.3E-24 123.9 7.1 105 1-107 93-200 (206)
23 3q93_A 7,8-dihydro-8-oxoguanin 99.8 5.1E-20 1.7E-24 120.5 7.1 99 1-102 52-150 (176)
24 2fb1_A Conserved hypothetical 99.8 1.5E-20 5.1E-25 127.7 4.3 103 1-106 44-146 (226)
25 3fjy_A Probable MUTT1 protein; 99.8 1.7E-19 5.6E-24 129.9 9.9 106 1-107 51-179 (364)
26 2b06_A MUTT/nudix family prote 99.8 2.8E-19 9.7E-24 114.2 10.0 98 1-102 38-135 (155)
27 3f6a_A Hydrolase, nudix family 99.8 2E-19 6.9E-24 115.5 8.5 102 1-103 30-151 (159)
28 3hhj_A Mutator MUTT protein; n 99.8 2.6E-19 8.7E-24 114.9 9.0 99 1-103 58-157 (158)
29 3eds_A MUTT/nudix family prote 99.8 1.1E-19 3.8E-24 116.2 7.0 87 1-88 45-137 (153)
30 2w4e_A MUTT/nudix family prote 99.8 4.6E-19 1.6E-23 112.5 9.8 86 1-89 34-120 (145)
31 3r03_A Nudix hydrolase; struct 99.8 2E-19 6.8E-24 113.5 7.7 101 1-104 37-137 (144)
32 2fkb_A Putative nudix hydrolas 99.8 1.1E-18 3.7E-23 114.1 11.2 102 1-106 67-171 (180)
33 1k2e_A Nudix homolog; nudix/MU 99.8 1.6E-19 5.6E-24 115.8 7.0 97 1-105 25-138 (156)
34 3id9_A MUTT/nudix family prote 99.8 1.5E-19 5.1E-24 117.3 6.8 99 1-102 48-151 (171)
35 2rrk_A ORF135, CTP pyrophospho 99.8 6.2E-19 2.1E-23 110.6 9.4 97 1-102 37-133 (140)
36 1rya_A GDP-mannose mannosyl hy 99.8 3.8E-19 1.3E-23 113.9 8.4 98 1-99 46-152 (160)
37 3ees_A Probable pyrophosphohyd 99.8 5.2E-19 1.8E-23 112.4 8.9 99 1-104 50-148 (153)
38 3fk9_A Mutator MUTT protein; s 99.8 1.7E-19 5.7E-24 119.3 6.8 100 1-102 28-130 (188)
39 3oga_A Nucleoside triphosphata 99.8 5.2E-19 1.8E-23 114.1 8.0 96 1-98 57-161 (165)
40 3h95_A Nucleoside diphosphate- 99.8 2.2E-18 7.6E-23 114.6 10.5 98 1-100 54-155 (199)
41 1vhz_A ADP compounds hydrolase 99.8 4.7E-19 1.6E-23 118.0 7.1 89 1-92 77-166 (198)
42 3cng_A Nudix hydrolase; struct 99.8 1.8E-18 6.1E-23 114.3 9.2 99 1-105 67-166 (189)
43 2pqv_A MUTT/nudix family prote 99.8 7.9E-19 2.7E-23 112.0 7.0 89 1-90 41-133 (154)
44 3f13_A Putative nudix hydrolas 99.8 2E-18 6.8E-23 111.9 8.2 94 1-104 39-132 (163)
45 1hzt_A Isopentenyl diphosphate 99.8 5.2E-19 1.8E-23 116.8 5.5 99 1-101 62-171 (190)
46 1vk6_A NADH pyrophosphatase; 1 99.8 1.8E-18 6.1E-23 120.2 7.7 100 1-105 166-266 (269)
47 1v8y_A ADP-ribose pyrophosphat 99.8 1.2E-17 4E-22 108.4 11.2 87 1-91 62-149 (170)
48 1f3y_A Diadenosine 5',5'''-P1, 99.8 4.4E-18 1.5E-22 109.3 8.5 104 1-105 40-163 (165)
49 2jvb_A Protein PSU1, mRNA-deca 99.7 2.4E-18 8.1E-23 108.8 6.7 86 1-90 30-118 (146)
50 2qjt_B Nicotinamide-nucleotide 99.7 5.7E-18 1.9E-22 121.0 9.0 104 1-105 235-350 (352)
51 1q27_A Putative nudix hydrolas 99.7 9E-18 3.1E-22 108.9 9.2 100 1-104 64-168 (171)
52 3e57_A Uncharacterized protein 99.7 4E-18 1.4E-22 114.4 7.7 84 1-87 99-189 (211)
53 2fvv_A Diphosphoinositol polyp 99.7 2.7E-18 9.3E-23 114.1 6.7 83 1-88 68-152 (194)
54 2yvp_A NDX2, MUTT/nudix family 99.7 1.4E-18 4.9E-23 113.8 5.0 87 1-90 70-158 (182)
55 2qjo_A Bifunctional NMN adenyl 99.7 3.4E-18 1.2E-22 121.5 7.1 101 1-102 230-340 (341)
56 1mut_A MUTT, nucleoside tripho 99.7 9.1E-19 3.1E-23 108.3 3.1 94 1-99 33-126 (129)
57 1g0s_A Hypothetical 23.7 kDa p 99.7 4.4E-18 1.5E-22 114.2 6.4 88 1-91 92-184 (209)
58 3o6z_A GDP-mannose pyrophospha 99.7 3E-18 1E-22 113.5 5.3 89 1-93 81-173 (191)
59 3q91_A Uridine diphosphate glu 99.7 5.3E-18 1.8E-22 114.6 6.4 90 1-93 97-195 (218)
60 2kdv_A RNA pyrophosphohydrolas 99.7 1.9E-17 6.4E-22 107.2 8.3 86 1-87 33-136 (164)
61 1mk1_A ADPR pyrophosphatase; n 99.7 8.4E-18 2.9E-22 112.6 6.4 87 1-90 72-162 (207)
62 2dsc_A ADP-sugar pyrophosphata 99.7 2.1E-17 7.2E-22 111.0 8.3 85 1-88 94-185 (212)
63 1nqz_A COA pyrophosphatase (MU 99.7 1.1E-17 3.7E-22 110.7 6.3 84 1-87 66-152 (194)
64 2fml_A MUTT/nudix family prote 99.7 1.1E-17 3.8E-22 116.4 6.1 105 1-107 72-201 (273)
65 1x51_A A/G-specific adenine DN 99.7 1E-16 3.4E-21 102.5 7.2 96 1-101 51-148 (155)
66 2a6t_A SPAC19A8.12; alpha/beta 99.6 1.5E-16 5.3E-21 110.5 5.4 85 1-89 128-215 (271)
67 1q33_A Pyrophosphatase, ADP-ri 99.6 3.6E-16 1.2E-20 109.7 7.0 104 1-107 152-281 (292)
68 1u20_A U8 snoRNA-binding prote 99.6 9.7E-17 3.3E-21 107.9 3.2 82 1-85 68-164 (212)
69 3fsp_A A/G-specific adenine gl 99.6 4.4E-15 1.5E-19 107.2 7.9 96 1-105 269-364 (369)
70 2xsq_A U8 snoRNA-decapping enz 99.6 1.2E-15 4E-20 103.0 4.4 82 1-84 77-171 (217)
71 2dho_A Isopentenyl-diphosphate 99.5 9.5E-14 3.2E-18 94.7 9.8 85 1-87 89-191 (235)
72 2pny_A Isopentenyl-diphosphate 99.5 9.1E-14 3.1E-18 95.3 9.7 100 1-102 100-226 (246)
73 3dup_A MUTT/nudix family prote 99.5 1.3E-13 4.5E-18 96.8 8.6 88 2-89 153-245 (300)
74 3rh7_A Hypothetical oxidoreduc 99.4 1.5E-12 5.1E-17 92.3 8.4 95 1-109 204-300 (321)
75 3qsj_A Nudix hydrolase; struct 99.3 2.2E-12 7.6E-17 87.7 7.2 86 1-86 42-188 (232)
76 3kvh_A Protein syndesmos; NUDT 99.2 3.1E-12 1.1E-16 84.1 1.2 59 1-63 56-116 (214)
77 3bho_A Cleavage and polyadenyl 99.0 1.4E-09 4.8E-14 72.1 6.9 82 1-84 85-183 (208)
78 1vig_A Vigilin; RNA-binding pr 47.4 11 0.00036 20.1 1.8 16 19-34 27-42 (71)
79 2opv_A KHSRP protein; KH domai 41.7 18 0.0006 19.8 2.2 17 18-34 35-51 (85)
80 1x4m_A FAR upstream element bi 39.0 20 0.00069 20.1 2.2 17 18-34 36-52 (94)
81 2axy_A Poly(RC)-binding protei 38.6 22 0.00075 18.8 2.2 17 18-34 26-42 (73)
82 2ctk_A Vigilin; K homology typ 37.2 18 0.00061 20.8 1.8 17 18-34 38-54 (104)
83 2dgr_A Ring finger and KH doma 34.3 22 0.00075 19.6 1.8 15 19-33 32-46 (83)
84 1j5k_A Heterogeneous nuclear r 33.9 27 0.00094 19.2 2.2 17 18-34 35-51 (89)
85 1zzk_A Heterogeneous nuclear r 33.7 28 0.00097 18.8 2.2 17 18-34 28-44 (82)
86 2yqr_A KIAA0907 protein; struc 32.7 27 0.00091 20.8 2.0 17 17-33 39-55 (119)
87 2hh3_A KH-type splicing regula 32.5 29 0.001 20.0 2.2 17 18-34 32-48 (106)
88 1wvn_A Poly(RC)-binding protei 32.5 31 0.001 18.6 2.2 17 18-34 27-43 (82)
89 2p2r_A Poly(RC)-binding protei 32.5 31 0.0011 18.3 2.2 17 18-34 26-42 (76)
90 1we8_A Tudor and KH domain con 32.2 28 0.00095 19.9 2.0 17 18-34 36-52 (104)
91 2hh2_A KH-type splicing regula 31.9 29 0.00098 20.0 2.1 17 18-34 28-44 (107)
92 1k1g_A SF1-BO isoform; splicin 31.5 26 0.0009 21.1 1.9 16 18-33 34-49 (131)
93 1zl8_A LIN-7; heterodimer, alp 31.4 24 0.00081 17.8 1.4 9 17-25 43-51 (53)
94 2ctm_A Vigilin; K homology typ 31.3 26 0.00089 19.7 1.8 15 18-32 38-52 (95)
95 1dtj_A RNA-binding neurooncolo 30.3 36 0.0012 17.9 2.2 17 18-34 24-40 (76)
96 2ctj_A Vigilin; K homology typ 29.6 30 0.001 19.6 1.8 15 18-32 38-53 (95)
97 2drn_C 24-residues peptide fro 28.4 42 0.0014 14.1 2.0 10 13-22 2-11 (26)
98 1x4n_A FAR upstream element bi 28.3 37 0.0013 18.8 2.1 17 18-34 36-52 (92)
99 2ctl_A Vigilin; K homology typ 28.1 32 0.0011 19.4 1.8 17 18-34 38-54 (97)
100 2cte_A Vigilin; K homology typ 27.7 26 0.0009 19.6 1.4 16 18-33 38-53 (94)
101 1bm8_A Transcription factor MB 27.3 30 0.001 19.9 1.5 24 75-98 72-95 (99)
102 1ec6_A RNA-binding protein NOV 25.4 48 0.0016 18.0 2.2 17 18-34 24-40 (87)
103 1frr_A Ferredoxin I; electron 22.4 47 0.0016 18.2 1.8 22 4-30 9-34 (95)
104 1awd_A Ferredoxin; electron tr 22.4 50 0.0017 18.1 1.9 22 4-30 8-33 (94)
105 2cpq_A FragIle X mental retard 22.1 78 0.0027 17.8 2.6 17 18-34 36-53 (91)
106 1wri_A Ferredoxin II, ferredox 21.7 48 0.0017 18.2 1.7 19 3-21 8-30 (93)
107 2yzt_A Putative uncharacterize 20.7 39 0.0013 17.6 1.1 20 3-24 24-45 (67)
No 1
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.92 E-value=2.2e-24 Score=135.87 Aligned_cols=103 Identities=24% Similarity=0.286 Sum_probs=81.2
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCC--eeEEEEEEeEecccccccccCCcceeEEE
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNT--DYQGYMFPLLVQDQLAEWPEKNVRSRKWM 78 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~--~~~~~~f~~~~~~~~~~~~~~e~~~~~W~ 78 (121)
|.||||++++|||+.+||+||++||||+.+..... ++.+.+.....+. ...+++|.+....... .+++|..+++|+
T Consensus 27 W~~PgG~ve~gEt~~~aa~RE~~EEtGl~~~~~~~-l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~-~~~~E~~~~~W~ 104 (134)
T 3i7u_A 27 WSFPKGNIEPGEKPEETAVREVWEETGVKGEILDY-IGEIHYWYTLKGERIFKTVKYYLMKYKEGEP-RPSWEVKDAKFF 104 (134)
T ss_dssp EECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEE-EEEEEEEEEETTEEEEEEEEEEEEEEEEECC-CCCTTSSEEEEE
T ss_pred EECCeeEecCCCCHHHHHHHHHHHhcCceEEEeee-eeeeeEEecCCCceEEEEEEEEEEEEcCCcC-cCChhheEEEEE
Confidence 89999999999999999999999999999988877 8876554443332 2345667777655443 345688899999
Q ss_pred eHHHHHHhcCchhHHHHHHHHHHHhcc
Q 033333 79 SVAEARKVCQHWWMKEALDRLVMRLTS 105 (121)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~~~~~~~~~~ 105 (121)
+++++.+++.++..+.++..+.+.+.+
T Consensus 105 ~~~e~~~~l~~~~~r~il~~a~~l~~k 131 (134)
T 3i7u_A 105 PIKEAKKLLKYKGDKEIFEKALKLKEK 131 (134)
T ss_dssp EHHHHHHHBCSHHHHHHHHHHHHHHHH
T ss_pred EHHHHhhhcCChHHHHHHHHHHHHHHc
Confidence 999999999889888888887765543
No 2
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.88 E-value=2.1e-22 Score=129.25 Aligned_cols=105 Identities=28% Similarity=0.198 Sum_probs=77.2
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEee--eCCCCCeeEEEEEEeEecccc-cccccCCcceeEE
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFK--SRAHNTDYQGYMFPLLVQDQL-AEWPEKNVRSRKW 77 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~--~~~~~~~~~~~~f~~~~~~~~-~~~~~~e~~~~~W 77 (121)
|.||||++++|||+.+||+||++||||+.+..... ++.+.+. +..........+|.+...... ...+.+|..+++|
T Consensus 38 W~lPgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W 116 (155)
T 3u53_A 38 WTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTI-IEGFKRELNYVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRW 116 (155)
T ss_dssp EECSEEECCSSCCHHHHHHHHHHHHHCCCGGGEEE-EEEEEEEEEEEETTEEEEEEEEEEEESCTTCCCCCCTTEEEEEE
T ss_pred EECCeeeccCCCCHHHHHHHHHHHHHCCcccccee-eeeEeeeeecCCCcceeEEEEEEEEEeccCCccCCCcceeEEEE
Confidence 89999999999999999999999999999876655 5543322 122223334455555554433 2234467888999
Q ss_pred EeHHHHHHhcCchhHHHHHHHHHHHhccc
Q 033333 78 MSVAEARKVCQHWWMKEALDRLVMRLTSQ 106 (121)
Q Consensus 78 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 106 (121)
++++++.+++.++.++.++..+.+.+.+.
T Consensus 117 ~~~~ea~~~~~~~~~~~~L~~a~~~L~~~ 145 (155)
T 3u53_A 117 LGLEEACQLAQFKEMKAALQEGHQFLCSI 145 (155)
T ss_dssp ECHHHHHHHHCSHHHHHHHHHHHHHHHHH
T ss_pred eEHHHHHHHcCCHHHHHHHHHHHHHHhCc
Confidence 99999999998898888988887776543
No 3
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.87 E-value=1.6e-21 Score=121.66 Aligned_cols=103 Identities=24% Similarity=0.291 Sum_probs=81.2
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCC--CeeEEEEEEeEecccccccccCCcceeEEE
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHN--TDYQGYMFPLLVQDQLAEWPEKNVRSRKWM 78 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~--~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~ 78 (121)
|.||||++++||++.+||+||++||||+.+..... ++.+.+.....+ .....++|.+........ +.+|..+++|+
T Consensus 27 w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~~~~~W~ 104 (134)
T 2pbt_A 27 WSFPKGNIEPGEKPEETAVREVWEETGVKGEILDY-IGEIHYWYTLKGERIFKTVKYYLMKYKEGEPR-PSWEVKDAKFF 104 (134)
T ss_dssp EECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEE-EEEEEEEEEETTEEEEEEEEEEEEEEEEECCC-CCTTSSEEEEE
T ss_pred EECCccccCCCCCHHHHHHHHHHHHHCCccEEeee-eeEEEEEeeCCCcEEEEEEEEEEEEecCCCcC-CCcceeEEEEE
Confidence 89999999999999999999999999999988777 887655444322 234456777776554332 23478889999
Q ss_pred eHHHHHHhcCchhHHHHHHHHHHHhcc
Q 033333 79 SVAEARKVCQHWWMKEALDRLVMRLTS 105 (121)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~~~~~~~~~~ 105 (121)
+++++.++...+..+.++..+.+++.+
T Consensus 105 ~~~el~~~~~~~~~~~~l~~~~~~~~~ 131 (134)
T 2pbt_A 105 PIKEAKKLLKYKGDKEIFEKALKLKEK 131 (134)
T ss_dssp EHHHHHHHCCSHHHHHHHHHHHHHHHH
T ss_pred cHHHHHhhhcchhHHHHHHHHHHHhhh
Confidence 999999999889888999888877654
No 4
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.87 E-value=3.4e-21 Score=119.10 Aligned_cols=99 Identities=28% Similarity=0.271 Sum_probs=78.6
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEecccccccccCCcceeEEEeH
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSV 80 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~ 80 (121)
|.||||++++||++.+||+||++||||+.+..... ++.+.+... +.....++|.+...... ..+..|..+++|+++
T Consensus 26 w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~e~~~~~w~~~ 101 (126)
T 1vcd_A 26 WVFPKGHPEPGESLEEAAVREVWEETGVRAEVLLP-LYPTRYVNP--KGVEREVHWFLMRGEGA-PRLEEGMTGAGWFSP 101 (126)
T ss_dssp EECCEECCCTTCCHHHHHHHHHHHHHCCEEEEEEE-EEEEEEECT--TSCEEEEEEEEEEEESC-CCCCTTCCEEEEECH
T ss_pred ccCCcCcCCCCCCHHHHHHHHHHHhhCcEeeeccE-EeEEEEecC--CceEEEEEEEEEEcCCC-CCCCcceeeeEEcCH
Confidence 89999999999999999999999999999988777 887766543 23344566766554433 233467788999999
Q ss_pred HHHHHhcCchhHHHHHHHHHHHh
Q 033333 81 AEARKVCQHWWMKEALDRLVMRL 103 (121)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~ 103 (121)
+++.++...+..+.++..+.+++
T Consensus 102 ~el~~~~~~~~~~~~l~~~~~~l 124 (126)
T 1vcd_A 102 EEARALLAFPEDLGLLEVALERL 124 (126)
T ss_dssp HHHHHHBCSHHHHHHHHHHHHHS
T ss_pred HHHHHhhcChhHHHHHHHHHHhc
Confidence 99999988888888888877654
No 5
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.86 E-value=4.8e-21 Score=120.12 Aligned_cols=101 Identities=20% Similarity=0.174 Sum_probs=76.6
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCcee---eee-cceeeeeEeeeCCCCCeeEEEEEEeEecccccccccCCcceeE
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTG---IVE-CELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRK 76 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~---~~~-~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~ 76 (121)
|.||||++++||++++||+||++||||+.+ ... .. ++.+.+... +.....++|.+...........+|..+++
T Consensus 32 w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~f~~~~~~~~~~~~~~e~~~~~ 108 (138)
T 1ktg_A 32 WTPPKGHVDPGEDEWQAAIRETKEEANITKEQLTIHEDC-HETLFYEAK--GKPKSVKYWLAKLNNPDDVQLSHEHQNWK 108 (138)
T ss_dssp EESSEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEEE-EEEEEEEET--TEEEEEEEEEEEECSCCCCCCCTTEEEEE
T ss_pred EeCCccccCCCCCHHHHHHHHHHHHHCCCccceEEeccc-cceEEEEeC--CCceEEEEEEEEecCCcccCCCchhcEeE
Confidence 899999999999999999999999999954 433 22 445444433 23455677888766532223346778899
Q ss_pred EEeHHHHHHhcCchhHHHHHHHHHHHhc
Q 033333 77 WMSVAEARKVCQHWWMKEALDRLVMRLT 104 (121)
Q Consensus 77 W~~~~~l~~~~~~~~~~~~~~~~~~~~~ 104 (121)
|++++++.++...+..+.++..+.++++
T Consensus 109 W~~~~el~~~~~~~~~~~~l~~~~~~l~ 136 (138)
T 1ktg_A 109 WCELEDAIKIADYAEMGSLLRKFSAFLA 136 (138)
T ss_dssp EECHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred eccHHHHHHhhccchHHHHHHHHHHHhh
Confidence 9999999999888888888888877663
No 6
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.85 E-value=1.3e-20 Score=119.82 Aligned_cols=106 Identities=25% Similarity=0.189 Sum_probs=77.6
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeee-eEee---eC-CCCCeeEEEEEEeEecccc-cccccCCcce
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGE-WNFK---SR-AHNTDYQGYMFPLLVQDQL-AEWPEKNVRS 74 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~-~~~~---~~-~~~~~~~~~~f~~~~~~~~-~~~~~~e~~~ 74 (121)
|.||||++++||++.+||+||++||||+.+......+.. +.+. .. ........++|.+...... ...+.+|..+
T Consensus 33 w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~E~~~ 112 (149)
T 3son_A 33 WQFVAGGGEDEEAISETAKRESIEELNLDVDVKMYSLDSHASIPNFHFSFNKPYVVPEYCFAIDLTSCSYQVTLSLEHSE 112 (149)
T ss_dssp EECEEEECCTTCCHHHHHHHHHHHHHTCCSCCCEEEEEEEEEEEGGGTCSSSCSEEEEEEEEEECTTTGGGCCCCTTEEE
T ss_pred EeCCccccCCCCCHHHHHHHHHHHHhCCCcccceEEEEeeecccceeeccCCceEeEEEEEEEEcCCCCCcccCCCceee
Confidence 899999999999999999999999999997653111221 1111 11 1223445577888876321 2222467888
Q ss_pred eEEEeHHHHHHhcCchhHHHHHHHHHHHhccc
Q 033333 75 RKWMSVAEARKVCQHWWMKEALDRLVMRLTSQ 106 (121)
Q Consensus 75 ~~W~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 106 (121)
++|++++++.++...+..+.++..+.+++.++
T Consensus 113 ~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~ 144 (149)
T 3son_A 113 LRWVSYESAIQLLEWDSNKTALYELNERLKNN 144 (149)
T ss_dssp EEEECHHHHHHHCCCHHHHHHHHHHHHHHHTT
T ss_pred EEEeCHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999998887665
No 7
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.85 E-value=2e-20 Score=119.14 Aligned_cols=99 Identities=22% Similarity=0.302 Sum_probs=73.6
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEeccccc-ccccCCcceeEEEe
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLA-EWPEKNVRSRKWMS 79 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~-~~~~~e~~~~~W~~ 79 (121)
|.||||++++||++.+||+||++||||+.+..... ++.+.+..+........++|.+....... ....++..+++|++
T Consensus 35 w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~-~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~e~~~~~W~~ 113 (153)
T 2b0v_A 35 LNQPAGHLEPGESIIQACSREVLEETGHSFLPEVL-TGIYHWTCASNGTTYLRFTFSGQVVSFDPDRKLDTGIVRAAWFS 113 (153)
T ss_dssp EECSEEECCTTSCHHHHHHHHHHHHHSEEEEEEEE-EEEEEEEETTTTEEEEEEEEEEEEEEECTTSCCCTTEEEEEEEE
T ss_pred EECCCcCcCCCCCHHHHHHHHHHHhhCcEeccceE-EEEEEEeCCCCCcEEEEEEEEEEeCCCCCCCCCCCCeeeEEEec
Confidence 89999999999999999999999999999988777 88876665543334455677777654332 22346777899999
Q ss_pred HHHHHHh---cCchhHHHHHHHHH
Q 033333 80 VAEARKV---CQHWWMKEALDRLV 100 (121)
Q Consensus 80 ~~~l~~~---~~~~~~~~~~~~~~ 100 (121)
++++.++ ...+.++.++..++
T Consensus 114 ~~el~~~~~~~~~~~~~~~l~~~~ 137 (153)
T 2b0v_A 114 IDEIRAKQAMHRTPLVMQCIEDYH 137 (153)
T ss_dssp HHHHHHTGGGBSSTHHHHHHHHHH
T ss_pred HHHHhhhhcccCcHHHHHHHHHHH
Confidence 9999995 34554555554443
No 8
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.84 E-value=2.9e-21 Score=127.41 Aligned_cols=106 Identities=19% Similarity=0.146 Sum_probs=79.1
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEecccc--cccccCCcceeEEE
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQL--AEWPEKNVRSRKWM 78 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~--~~~~~~e~~~~~W~ 78 (121)
|.||||++++||++++||+||++||||+.+..... ++.+.+............+|.+...... .....+|..+++|+
T Consensus 69 w~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~ 147 (187)
T 3i9x_A 69 WAVPGGFVDENESAEQAAERELEEETSLTDIPLIP-FGVFDKPGRDPRGWIISRAFYAIVPPEALEKRAAGDDAAEIGLF 147 (187)
T ss_dssp EECSEEECCTTSCHHHHHHHHHHHHHCCCSCCCEE-EEEECCTTSSTTSSEEEEEEEEECCHHHHHHHHHSTTTTTEEEE
T ss_pred EECCceeCCCCCCHHHHHHHHHHHHHCCCCcceEE-EEEEcCCccCCCCCEEEEEEEEEEcCcccCCcCCCCceeEEEEE
Confidence 89999999999999999999999999999888777 8876654433333344455555443322 12234677889999
Q ss_pred eHHHHHHhcCchhHHHHHHHHHHHhcccc
Q 033333 79 SVAEARKVCQHWWMKEALDRLVMRLTSQQ 107 (121)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 107 (121)
+++++..+...+..+.++..+++++++..
T Consensus 148 ~~~el~~~~l~~~~~~il~~a~~~l~~~~ 176 (187)
T 3i9x_A 148 PMTEALELPLAFDHLDMLKKAFSAITEEF 176 (187)
T ss_dssp EHHHHTTSCBSTTHHHHHHHHHHHHHHHH
T ss_pred eHHHcccCCCCccHHHHHHHHHHHHHhhh
Confidence 99999987666778888888888777654
No 9
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.83 E-value=1.7e-20 Score=120.12 Aligned_cols=101 Identities=17% Similarity=0.151 Sum_probs=78.7
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEeccccccc---ccCCcceeEE
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEW---PEKNVRSRKW 77 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~---~~~e~~~~~W 77 (121)
|.||||++++||++.+||+||++||||+.+..... ++.+.. . .....++|.+......... ..+|..+++|
T Consensus 48 w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~-~~~~~~---~--~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W 121 (156)
T 3gg6_A 48 WYLPAGRMEPGETIVEALQREVKEEAGLHCEPETL-LSVEER---G--PSWVRFVFLARPTGGILKTSKEADAESLQAAW 121 (156)
T ss_dssp EECSEEECCTTCCHHHHHHHHHHHHHCEEEEEEEE-EEEEES---S--TTEEEEEEEEEEEEECCCCGGGCSSSCSEEEE
T ss_pred EECCeeeccCCCCHHHHHHHHHHHhhCceeEeeeE-EEEEcC---C--CCEEEEEEEEEeeCCeeccCCCCCcceeeeEE
Confidence 89999999999999999999999999999988877 776542 1 1234567777655433221 2367788999
Q ss_pred EeHHHHHHhcCchhHHHHHHHHHHHhcccc
Q 033333 78 MSVAEARKVCQHWWMKEALDRLVMRLTSQQ 107 (121)
Q Consensus 78 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 107 (121)
++++++.+++..+.++.++..+...+..+.
T Consensus 122 ~~~~el~~~~~~~~~~~~l~~~~~~~~~~~ 151 (156)
T 3gg6_A 122 YPRTSLPTPLRAHDILHLVELAAQYRQQAR 151 (156)
T ss_dssp EETTSCCSSBSCTHHHHHHHHHHHHHHHHH
T ss_pred EcHHHCcccccchhHHHHHHHHHHHhhcCC
Confidence 999999999999998888888777665544
No 10
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.83 E-value=3.6e-20 Score=123.09 Aligned_cols=108 Identities=15% Similarity=0.169 Sum_probs=71.4
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCce-eeeecceeeeeEeeeCCC--------C-CeeEEEEEEeEeccccccc-cc
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVT-GIVECELLGEWNFKSRAH--------N-TDYQGYMFPLLVQDQLAEW-PE 69 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~-~~~~~~~l~~~~~~~~~~--------~-~~~~~~~f~~~~~~~~~~~-~~ 69 (121)
|.||||++++||++.+||+||++||||+. +......+..+.+..... . ..+...+|.+......... ..
T Consensus 71 w~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (197)
T 3fcm_A 71 WAWTGGHSDNEKDQLKVAIKELKEETGVKNPTPLLDKAFALDVLTVNGHIKRGKYVSSHLHLNLTYLIECSEDETLMLKE 150 (197)
T ss_dssp EECEEEECTTCCBHHHHHHHHHHHHHCCSSCEESCSSCSEEEEEEECCEEETTEEECCEEEEEEEEEEECCTTSCCCCCC
T ss_pred EECCccccCCCCCHHHHHHHHHHHHHCCCcccccCCCceEEEEeeecCccccCcccCCceeEEEEEEEEeCCCcccCCCc
Confidence 89999999999999999999999999998 554221021222111110 0 1122355666555443323 23
Q ss_pred CCcceeEEEeHHHHHHhcCchhHHHHHHHHHHHhccccc
Q 033333 70 KNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLTSQQL 108 (121)
Q Consensus 70 ~e~~~~~W~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (121)
+|..+++|++++++.++...+.++.++..+.+++.++..
T Consensus 151 ~E~~~~~W~~~~el~~~~~~~~~~~il~~~~~~l~~~~~ 189 (197)
T 3fcm_A 151 DENSGVMWIPFNEISKYCSEPHMIPIYEKLINKLKTQSK 189 (197)
T ss_dssp ----CEEEEEGGGHHHHCCCGGGHHHHHHHHHHHHC---
T ss_pred ccccceEEccHHHHHhhcCCHHHHHHHHHHHHHHHhccc
Confidence 678889999999999999999999999999999887653
No 11
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.82 E-value=2.5e-20 Score=120.22 Aligned_cols=98 Identities=17% Similarity=0.185 Sum_probs=77.5
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEecccccccccCCcceeEEEeH
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSV 80 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~ 80 (121)
|.||||++++||++.+||+||++||||+.+..... ++.+.+..+........++|.+....... ...|..+++|+++
T Consensus 39 w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~e~~~~~W~~~ 115 (161)
T 3exq_A 39 HSFPGGHVEVGEPCATAAIREVFEETGLRLSGVTF-CGTCEWFDDDRQHRKLGLLYRASNFTGTL--KASAEGQLSWLPI 115 (161)
T ss_dssp BBCCCCBCCTTSCHHHHHHHHHHHHHCCEESCCEE-EEEEEEECSSCSSEEEEEEEEECCEESCC--CGGGTTTEEEECG
T ss_pred EEccceecCCCCCHHHHHHHHHHHhhCcEecCCcE-EEEEecccCCCCeEEEEEEEEEeccCCcc--CCCccceEEEeeH
Confidence 67999999999999999999999999999988777 88877665444445556677766544332 2346677999999
Q ss_pred HHHHHhcCchhHHHHHHHHHH
Q 033333 81 AEARKVCQHWWMKEALDRLVM 101 (121)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~~~ 101 (121)
+++.++...+.++.++..+.+
T Consensus 116 ~el~~~~~~~~~~~~l~~~~~ 136 (161)
T 3exq_A 116 TALTRENSAASLPEFLQVFTG 136 (161)
T ss_dssp GGCCTTTBCTTHHHHHHHHTT
T ss_pred HHhhhCccChHHHHHHHHHhh
Confidence 999998777888888887766
No 12
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.82 E-value=1.8e-20 Score=118.74 Aligned_cols=100 Identities=20% Similarity=0.260 Sum_probs=73.0
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeee--cceeeeeE---e--------eeCCCCCeeEEEEEEeEeccccccc
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVE--CELLGEWN---F--------KSRAHNTDYQGYMFPLLVQDQLAEW 67 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~--~~~l~~~~---~--------~~~~~~~~~~~~~f~~~~~~~~~~~ 67 (121)
|.||||++++||++.+||+||++||||+.+... .. ++.+. | ..+........++|.+........
T Consensus 36 w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~- 113 (150)
T 2o1c_A 36 WQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTL-IDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQI- 113 (150)
T ss_dssp EESEEEECCTTCCHHHHHHHHHHHHHCCCHHHHTCCE-EEEEEEEEEECCGGGGGGBCTTCCEEEEEEEEEEESSCCCC-
T ss_pred eECCccccCCCCCHHHHHHHHHHHHhCCCccccceeE-EeeeceeeeeeecccccccCCCCcceEEEEEEEEcCCCCCc-
Confidence 899999999999999999999999999997653 22 33221 1 112122345667888876654332
Q ss_pred ccCCcceeEEEeHHHHHHhcCchhHHHHHHHHHHH
Q 033333 68 PEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMR 102 (121)
Q Consensus 68 ~~~e~~~~~W~~~~~l~~~~~~~~~~~~~~~~~~~ 102 (121)
..+|..+++|++++++.++...+..+.++..+.++
T Consensus 114 ~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~ 148 (150)
T 2o1c_A 114 VFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVIN 148 (150)
T ss_dssp CCSSSSCEEEEEHHHHHHHCSCHHHHHHHHHHTTC
T ss_pred ChhHhhccEeecHHHHHhhhcCHHHHHHHHHHHHh
Confidence 23678889999999999998888888887776544
No 13
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.82 E-value=6.3e-20 Score=115.59 Aligned_cols=97 Identities=23% Similarity=0.116 Sum_probs=76.8
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEecccccccccCCcceeEEEeH
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSV 80 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~ 80 (121)
|.||||++++||++.+||+||++||||+.+..... ++.+.+... +.....++|.+....... ..+|..+++|+++
T Consensus 36 w~lPgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~-~~~~~~~~~--~~~~~~~~f~~~~~~~~~--~~~E~~~~~W~~~ 110 (140)
T 3gwy_A 36 YEFPGGKVEEGESLQEALQREIMEEMDYVIEVGEK-LLTVHHTYP--DFEITMHAFLCHPVGQRY--VLKEHIAAQWLST 110 (140)
T ss_dssp EECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEEE-EEEEECCCS--SCCEEEEEEEEEECCSCC--CCCSSCEEEEECH
T ss_pred EECCCccCCCCCCHHHHHHHHHHHhhCcEEEeceE-EEEEEEEeC--CceEEEEEEEEEecCCcc--cccccceeEeccH
Confidence 89999999999999999999999999999988877 887665444 234456778887665432 2357788999999
Q ss_pred HHHHHhcCchhHHHHHHHHHHH
Q 033333 81 AEARKVCQHWWMKEALDRLVMR 102 (121)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~ 102 (121)
+++.++...+..+.+++.+.++
T Consensus 111 ~el~~~~~~~~~~~il~~~~~~ 132 (140)
T 3gwy_A 111 REMAILDWAEADKPIVRKISEQ 132 (140)
T ss_dssp HHHTTSCBCGGGHHHHHHHHC-
T ss_pred HHHhhCCCCcccHHHHHHHHhC
Confidence 9999988888888888776644
No 14
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.82 E-value=1.3e-19 Score=115.59 Aligned_cols=99 Identities=20% Similarity=0.329 Sum_probs=73.9
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEecccccccc-cCCcceeEEEe
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWP-EKNVRSRKWMS 79 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~-~~e~~~~~W~~ 79 (121)
|.||||++++||++.+||+||++||||+.+..... ++.+.+.... ......++|.+.........+ .+|..+++|++
T Consensus 31 w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~~~~~~~~~~-~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~ 108 (153)
T 3shd_A 31 WNQPAGHLEADETLVEAAARELWEETGISAQPQHF-IRMHQWIAPD-KTPFLRFLFAIELEQICPTQPHDSDIDCCRWVS 108 (153)
T ss_dssp EECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCEE-EEEEEECCTT-SCCEEEEEEEEECSSCCCCCCCSTTCCEEEEEC
T ss_pred EECCeEEeCCCCCHHHHHHHHHHHHHCcccccCcE-EEEEEEecCC-CceEEEEEEEEEccccCcCCCCcccceeeEEec
Confidence 89999999999999999999999999999988776 8877665553 334556778887766543333 46788899999
Q ss_pred HHHHHHh--cCchhHHHHHHHHHH
Q 033333 80 VAEARKV--CQHWWMKEALDRLVM 101 (121)
Q Consensus 80 ~~~l~~~--~~~~~~~~~~~~~~~ 101 (121)
++++... ...+..+.++..+.+
T Consensus 109 ~~el~~~~~~~~~~~~~~l~~~~~ 132 (153)
T 3shd_A 109 AEEILQASNLRSPLVAESIRCYQS 132 (153)
T ss_dssp HHHHHTCSCBSSTHHHHHHHHHHH
T ss_pred HHHhhccccccCchHHHHHHHHHh
Confidence 9999432 345655556655554
No 15
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.82 E-value=3.2e-20 Score=119.26 Aligned_cols=97 Identities=14% Similarity=0.127 Sum_probs=73.8
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEecccccccc-cCCcceeEEEe
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWP-EKNVRSRKWMS 79 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~-~~e~~~~~W~~ 79 (121)
|.||||++++||++.+||+||++||||+.+..... ++.+.+...........++|.+.......... .+|..+++|++
T Consensus 56 w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~ 134 (157)
T 4dyw_A 56 WGLPGGKVDWLEPVERAVCREIEEELGIALERATL-LCVVDHIDAANGEHWVAPVYLAHAFSGEPRVVEPDRHEALGWFA 134 (157)
T ss_dssp EECCEEECCTTCCHHHHHHHHHHHHHSCEEESCEE-EEEEEEEETTTTEEEEEEEEEESEEESCCCCSCTTTEEEEEEEE
T ss_pred EECCcccCCCCCCHHHHHHHHHHHHHCcccccCcE-EEEEEeeccCCCcEEEEEEEEEEEcCCCcccCCCCcEeEEEEEC
Confidence 89999999999999999999999999999988777 88877666544445556777776554433222 35778899999
Q ss_pred HHHHHHhcCchhHHHHHHHH
Q 033333 80 VAEARKVCQHWWMKEALDRL 99 (121)
Q Consensus 80 ~~~l~~~~~~~~~~~~~~~~ 99 (121)
++++.+. ..+..+.++..+
T Consensus 135 ~~el~~~-l~~~~~~~l~~l 153 (157)
T 4dyw_A 135 LDDLPQP-LTHATRIALEQV 153 (157)
T ss_dssp TTSCCSS-BCHHHHHHHHHH
T ss_pred HHHcccc-cCHHHHHHHHHH
Confidence 9999884 446556666554
No 16
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.82 E-value=1.2e-19 Score=115.83 Aligned_cols=100 Identities=19% Similarity=0.171 Sum_probs=78.2
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEecccccccccCCcceeEEEeH
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSV 80 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~ 80 (121)
|.||||++++||++.+||+||++||||+.+..... ++.+.+.... .....++|.+....... .+.+|..+++|+++
T Consensus 38 w~~PgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~e~~~~~W~~~ 113 (153)
T 3grn_A 38 WDLPGGKVNPDESLKEGVAREVWEETGITMVPGDI-AGQVNFELTE--KKVIAIVFDGGYVVADV-KLSYEHIEYSWVSL 113 (153)
T ss_dssp EECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCSE-EEEEEEECSS--CEEEEEEEEEEECCCCC-CCCTTEEEEEEECH
T ss_pred EECceeecCCCCCHHHHHHhhhhhhhCcEeecceE-EEEEEEecCC--ceEEEEEEEEEecCCcE-ecCCCcceEEEEEH
Confidence 89999999999999999999999999999988777 8877655442 33455667766554332 23467788999999
Q ss_pred HHHHHhc-CchhHHHHHHHHHHHhc
Q 033333 81 AEARKVC-QHWWMKEALDRLVMRLT 104 (121)
Q Consensus 81 ~~l~~~~-~~~~~~~~~~~~~~~~~ 104 (121)
+++.++. ..+.++.+++.+.+.-.
T Consensus 114 ~el~~~~~~~~~~~~~l~~l~~~~~ 138 (153)
T 3grn_A 114 EKILGMETLPAYFRDFFERFDRENK 138 (153)
T ss_dssp HHHTTCSSSCHHHHHHHHHHHHHHT
T ss_pred HHhhhcccchHHHHHHHHHHhcccc
Confidence 9999987 78888888888775533
No 17
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.82 E-value=2.5e-20 Score=127.60 Aligned_cols=106 Identities=20% Similarity=0.178 Sum_probs=81.2
Q ss_pred CccCCcccCC--CCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEecccccccccCCcceeEEE
Q 033333 1 MLFPKGGWEI--DESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWM 78 (121)
Q Consensus 1 W~lPgG~ve~--gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~ 78 (121)
|.||||++++ ||++++||+||++||||+.+....+ ++.+.......+...+.++|.+.+.........++..+++|+
T Consensus 53 W~lPGG~ve~~~gEs~~~AA~REl~EEtGl~~~~~~~-l~~~~~~~r~~~~~~~~~~y~a~~~~~~~~~~~~e~~~~~W~ 131 (240)
T 3gz5_A 53 WGLPGGFIDETCDESLEQTVLRKLAEKTAVVPPYIEQ-LCTVGNNSRDARGWSVTVCYTALMSYQACQIQIASVSDVKWW 131 (240)
T ss_dssp EECSEEECCTTTCSBHHHHHHHHHHHHHSSCCSEEEE-EEEEEESSSSTTSCEEEEEEEEECCHHHHHHHHTTCTTEEEE
T ss_pred EECCccccCCCCCcCHHHHHHHHHHHHHCCCCCceee-EEEeCCCccCCCceEEEEEEEEEecccccCCCCCcccceEEe
Confidence 8999999999 9999999999999999999988887 888876555444555667777766554332234677789999
Q ss_pred eHHHHHHhcCchhHHHHHHHHHHHhcccc
Q 033333 79 SVAEARKVCQHWWMKEALDRLVMRLTSQQ 107 (121)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 107 (121)
+++++.........+.++..+.++++.+.
T Consensus 132 ~~~el~~~~l~~dh~~il~~a~~rlr~kl 160 (240)
T 3gz5_A 132 PLADVLQMPLAFDHLQLIEQARERLTQKA 160 (240)
T ss_dssp EHHHHTTSCCSTTHHHHHHHHHHHHHHHH
T ss_pred cHHHcccCCcchhHHHHHHHHHHHHHHhc
Confidence 99999865444456778888777776644
No 18
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.81 E-value=4.2e-20 Score=116.18 Aligned_cols=96 Identities=20% Similarity=0.194 Sum_probs=70.3
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEecccccccccCCcceeEEEeH
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSV 80 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~ 80 (121)
|.||||++++||++.+||+||++||||+.+..... ++.+.+.......+...++|.+.... . ..+.+|..+++|+++
T Consensus 39 w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~-~~~~~~~~~~~~~~~~~~~f~~~~~~-~-~~~~~e~~~~~W~~~ 115 (139)
T 2yyh_A 39 LALPGGFVEVGERVEEAAAREMREETGLEVRLHKL-MGVYSDPERDPRAHVVSVVWIGDAQG-E-PKAGSDAKKVKVYRL 115 (139)
T ss_dssp EECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEEE-EEEECCTTSCTTSCEEEEEEEEEEES-C-CCCCTTEEEEEEECT
T ss_pred EECccccCCCCCCHHHHHHHHHHHHHCCCcccceE-EEEECCCCcCCCceEEEEEEEEecCC-c-cCCCCCcceEEEEEH
Confidence 89999999999999999999999999999987776 77765533322334566778877633 2 223457788999999
Q ss_pred HHHH--HhcCchhHHHHHHHHHH
Q 033333 81 AEAR--KVCQHWWMKEALDRLVM 101 (121)
Q Consensus 81 ~~l~--~~~~~~~~~~~~~~~~~ 101 (121)
+++. .+..+ .+.++..+++
T Consensus 116 ~el~~~~l~~~--~~~~l~~~l~ 136 (139)
T 2yyh_A 116 EEIPLDKLVFD--HKKIILDFLK 136 (139)
T ss_dssp TSCCGGGBCTT--HHHHHHHHHH
T ss_pred HHCCHhhcCCC--HHHHHHHHHh
Confidence 9998 55443 3455555443
No 19
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.81 E-value=4e-20 Score=123.75 Aligned_cols=105 Identities=11% Similarity=0.067 Sum_probs=82.1
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeC---CCCCeeEEEEEEeEecccccccccCCcceeEE
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSR---AHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKW 77 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~---~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W 77 (121)
|.||||++++||++.+||+||++||||+.+..... ++.+..... ........++|.+....... .++.|..+++|
T Consensus 92 w~lPgG~ve~gEs~~~aa~REl~EEtGl~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~E~~~~~w 169 (205)
T 3q1p_A 92 WALPGGWADVGYTPTEVAAKEVFEETGYEVDHFKL-LAIFDKEKHQPSPSATHVYKIFIGCEIIGGEK-KTSIETEEVEF 169 (205)
T ss_dssp EECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEEE-EEEEEHHHHSCCCCSSCEEEEEEEEEEEEECC-CCCTTSCCEEE
T ss_pred EECCcCccCCCCCHHHHHHHHHHHHHCCccccceE-EEEEeccccCCCCCCceEEEEEEEEEecCCcc-CCCCcceEEEE
Confidence 89999999999999999999999999999988777 777654222 12234455677777654432 33468888999
Q ss_pred EeHHHHHHhcCchhHHHHHHHHHHHhcccc
Q 033333 78 MSVAEARKVCQHWWMKEALDRLVMRLTSQQ 107 (121)
Q Consensus 78 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 107 (121)
+++++++.+...+.....+..+++.+.+..
T Consensus 170 ~~~~el~~l~~~~~~~~~i~~~~~~~~~~~ 199 (205)
T 3q1p_A 170 FGENELPNLSIARNTEDQIKEMFAYMKDPQ 199 (205)
T ss_dssp ECTTSCCCBCTTTCCHHHHHHHHHHHHCTT
T ss_pred EeHHHhhhcCCCccHHHHHHHHHHHHhCCC
Confidence 999999999888888889999888776654
No 20
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.81 E-value=4.2e-19 Score=112.30 Aligned_cols=99 Identities=25% Similarity=0.382 Sum_probs=74.0
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeE-eeeCCCC---CeeEEEEEEeEecccccccccCCcceeE
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWN-FKSRAHN---TDYQGYMFPLLVQDQLAEWPEKNVRSRK 76 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~-~~~~~~~---~~~~~~~f~~~~~~~~~~~~~~e~~~~~ 76 (121)
|.||||++++||++.+||+||+.||||+.+..... ++.+. +....+. .....++|.+....... .+.+|..+++
T Consensus 43 w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~e~~~~~ 120 (148)
T 2azw_A 43 YFLPGGEIEGTETKEEAIHREVLEELGISVEIGCY-LGEADEYFYSNHRQTAYYNPGYFYVANTWRQLS-EPLERTNTLH 120 (148)
T ss_dssp EECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEEE-EEEEEEEEEETTTTEEEEEEEEEEEEEEEEECS-SCC-CCSEEE
T ss_pred EeCCCcccCCCCCHHHHHHHHHHHHhCCeeEeeeE-EEEEEEEEcCCCCCcceEEEEEEEEEEcCcCCc-CCCCceeeEE
Confidence 89999999999999999999999999999988776 77653 2222222 12345667776554332 2335667899
Q ss_pred EEeHHHHHHhcCchhHHHHHHHHHH
Q 033333 77 WMSVAEARKVCQHWWMKEALDRLVM 101 (121)
Q Consensus 77 W~~~~~l~~~~~~~~~~~~~~~~~~ 101 (121)
|++++++.++...+..+.++..+.+
T Consensus 121 W~~~~el~~~~~~~~~~~~l~~~~~ 145 (148)
T 2azw_A 121 WVAPEEAVRLLKRGSHRWAVEKWLA 145 (148)
T ss_dssp EECHHHHHHHBSCHHHHHHHHHHHH
T ss_pred EeeHHHHHhhhcchhHHHHHHHHHH
Confidence 9999999999988888888877663
No 21
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.81 E-value=5.7e-19 Score=113.02 Aligned_cols=88 Identities=17% Similarity=0.071 Sum_probs=69.1
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEecccc-ccc-ccCCcceeEEE
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQL-AEW-PEKNVRSRKWM 78 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~-~~~-~~~e~~~~~W~ 78 (121)
|.||||++++||++.+||+||++||||+.+..... ++.+.+..... .....++|.+...... ... ..+|..+++|+
T Consensus 45 w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~-l~~~~~~~~~~-~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~ 122 (159)
T 1sjy_A 45 WHIPSGAVEDGENPQDAAVREACEETGLRVRPVKF-LGAYLGRFPDG-VLILRHVWLAEPEPGQTLAPAFTDEIAEASFV 122 (159)
T ss_dssp EECSEEECCTTSCHHHHHHHHHHHHHSCCEEEEEE-EEEEEEECTTS-CEEEEEEEEEEECSSCCCCCCCCSSEEEEEEE
T ss_pred EECCccccCCCCCHHHHHHHHHHHHHCccceeeEE-EEEEecccCCC-ceEEEEEEEEEccCCCccccCCCCceeEEEEe
Confidence 89999999999999999999999999999988777 88776543332 4456778888765544 322 34677889999
Q ss_pred eHHHHHHhcCch
Q 033333 79 SVAEARKVCQHW 90 (121)
Q Consensus 79 ~~~~l~~~~~~~ 90 (121)
+++++.+++...
T Consensus 123 ~~~el~~~~~~~ 134 (159)
T 1sjy_A 123 SREDFAQLYAAG 134 (159)
T ss_dssp CHHHHHHHHHTT
T ss_pred cHHHHHHhhhcc
Confidence 999999986544
No 22
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.81 E-value=3.9e-20 Score=123.91 Aligned_cols=105 Identities=13% Similarity=0.121 Sum_probs=81.5
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCC---CCeeEEEEEEeEecccccccccCCcceeEE
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAH---NTDYQGYMFPLLVQDQLAEWPEKNVRSRKW 77 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~---~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W 77 (121)
|.||||++++||++.+||+||++||||+.+..... ++.+.+..... ......++|.+....... .++.|..+++|
T Consensus 93 w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~E~~~~~w 170 (206)
T 3o8s_A 93 WSLPGGWCDVDQSVKDNVVKEVKEEAGLDVEAQRV-VAILDKHKNNPAKSAHRVTKVFILCRLLGGEF-QPNSETVASGF 170 (206)
T ss_dssp EECSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEE-EEEEEHHHHCC-----CEEEEEEEEEEEEECC-CCCSSCSEEEE
T ss_pred EECCeeccCCCCCHHHHHHHHHHHHHCCcceeeeE-EEEEeccccCCCCCCceEEEEEEEEEecCCee-cCCCCceEEEE
Confidence 89999999999999999999999999999988777 78765322211 223445667776655432 33468889999
Q ss_pred EeHHHHHHhcCchhHHHHHHHHHHHhcccc
Q 033333 78 MSVAEARKVCQHWWMKEALDRLVMRLTSQQ 107 (121)
Q Consensus 78 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 107 (121)
+++++++.+...+.++..+..+++.+.+..
T Consensus 171 ~~~~el~~l~~~~~~~~~l~~~~~~~~~~~ 200 (206)
T 3o8s_A 171 FSLDDLPPLYLGKNTAEQLALCLEASRSEH 200 (206)
T ss_dssp ECTTSCCCBCTTTCCHHHHHHHHHHHHCSS
T ss_pred EeHHHhhhccCCCchHHHHHHHHHHHHCCC
Confidence 999999999888888999999988777654
No 23
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.81 E-value=5.1e-20 Score=120.53 Aligned_cols=99 Identities=16% Similarity=0.018 Sum_probs=77.4
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEecccccccccCCcceeEEEeH
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSV 80 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~ 80 (121)
|.||||++++||++++||+||++||||+.+..... ++.+.+...........++|.+....... ...+..+.+|+++
T Consensus 52 W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-l~~~~~~~~~~~~~~~~~~f~~~~~~~~~--~~~e~~~~~W~~~ 128 (176)
T 3q93_A 52 WNGFGGKVQEGETIEDGARRELQEESGLTVDALHK-VGQIVFEFVGEPELMDVHVFCTDSIQGTP--VESDEMRPCWFQL 128 (176)
T ss_dssp EECEEEECCTTSCHHHHHHHHHHHHHSCEESCCEE-EEEEEEEETTCSCEEEEEEEEESCEESCC--CCCSSEEEEEEET
T ss_pred EECceecCCCCCCHHHHHHHHHHHHHCCcceeeEE-EEEEEEEcCCCCcEEEEEEEEEECCCCCc--CCCcceeeEEeeH
Confidence 89999999999999999999999999999987777 88877766544444556777776443322 2345667899999
Q ss_pred HHHHHhcCchhHHHHHHHHHHH
Q 033333 81 AEARKVCQHWWMKEALDRLVMR 102 (121)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~ 102 (121)
+++..+...+..+.++..+++.
T Consensus 129 ~el~~~~~~~~~~~~l~~~~~~ 150 (176)
T 3q93_A 129 DQIPFKDMWPDDSYWFPLLLQK 150 (176)
T ss_dssp TCCCGGGBCTTHHHHHHHHHTT
T ss_pred HHccccccCcchHHHHHHHHcC
Confidence 9999887778777777777654
No 24
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.81 E-value=1.5e-20 Score=127.70 Aligned_cols=103 Identities=16% Similarity=0.173 Sum_probs=75.2
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEecccccccccCCcceeEEEeH
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSV 80 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~ 80 (121)
|.||||++++||++++||+||++||||+.+....+ ++.+.+.....+...+.++|.+...........+|..+++|+++
T Consensus 44 w~lPGG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~-l~~~~~~~r~~~~~~v~~~y~a~~~~~~~~~~~~e~~~~~W~~~ 122 (226)
T 2fb1_A 44 WSLMGGFVQKDESVDDAAKRVLAELTGLENVYMEQ-VGAFGAIDRDPGERVVSIAYYALININEYDRELVQKHNAYWVNI 122 (226)
T ss_dssp EECEEEECCTTSCHHHHHHHHHHHHHCCCSCEEEE-EEEECCTTSSSSSCEEEEEEEEECCTTSSCHHHHHHTTEEEEET
T ss_pred EECCeeccCCCCCHHHHHHHHHHHHHCCCCCceEE-EEEeCCCCcCCCceEEEEEEEEEecCcccccCCccccceEEEEH
Confidence 89999999999999999999999999999988777 88776444333344555677776654432223356778999999
Q ss_pred HHHHHhcCchhHHHHHHHHHHHhccc
Q 033333 81 AEARKVCQHWWMKEALDRLVMRLTSQ 106 (121)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~~ 106 (121)
+++.++..+ ...++..+.++++.+
T Consensus 123 ~el~~l~~d--h~~il~~a~~rlr~~ 146 (226)
T 2fb1_A 123 NELPALIFD--HPEMVDKAREMMKQK 146 (226)
T ss_dssp TSCCCBSTT--HHHHHHHHHHHHHHH
T ss_pred HHhhhccCC--HHHHHHHHHHHHHhh
Confidence 999877554 346666666655543
No 25
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.80 E-value=1.7e-19 Score=129.89 Aligned_cols=106 Identities=25% Similarity=0.242 Sum_probs=78.8
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCC-----------CeeEEEEEEeEecccc-----
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHN-----------TDYQGYMFPLLVQDQL----- 64 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~-----------~~~~~~~f~~~~~~~~----- 64 (121)
|.||||++++||++++||+||++||||+.+..... ++.+.|.....+ .....++|.+......
T Consensus 51 W~lPgG~ve~gEs~~~AA~REl~EEtGl~~~~~~~-l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l 129 (364)
T 3fjy_A 51 WSWPKGKLEQNETHRHAAVREIGEETGSPVKLGPY-LCEVEYPLSEEGKKTRHSHDCTADTKHTLYWMAQPISADDAEHL 129 (364)
T ss_dssp EECCEEECCTTCCHHHHHHHHHHHHHSCCEEEEEE-EEEEC---------------------CEEEEEEEECCHHHHHTT
T ss_pred EECCcCCCCCCCCHHHHHHHHHHHHhCCeeeeccc-cceEEEeccCCCcccccccccccCceEEEEEEEEecCCcccccc
Confidence 89999999999999999999999999999988777 777655444221 1234567777665432
Q ss_pred -----c--ccccCCcceeEEEeHHHHHHhcCchhHHHHHHHHHHHhcccc
Q 033333 65 -----A--EWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLTSQQ 107 (121)
Q Consensus 65 -----~--~~~~~e~~~~~W~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 107 (121)
. ....+|..+++|++++++.++..++..+.++..+.+++....
T Consensus 130 ~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~r~il~~~~~~l~~g~ 179 (364)
T 3fjy_A 130 LDAFGPVHRADVGEINDIVWVSVREARKILSHSTDKDTLAVFVDRVQEGA 179 (364)
T ss_dssp HHHHCCCCCCCTTTCCEEEEEEHHHHHHHCSCHHHHHHHHHHHHHHHTTG
T ss_pred ccccCccccCCccceeeeecCcHHHHHHHhcchhhHHHHHHHHHHhccCC
Confidence 1 112367888999999999999999999999999988876543
No 26
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.80 E-value=2.8e-19 Score=114.16 Aligned_cols=98 Identities=18% Similarity=0.195 Sum_probs=75.3
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEecccccccccCCcceeEEEeH
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSV 80 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~ 80 (121)
|.||||++++||++.+||+||++||||+.+..... ++.+.+... .+.....++|.+....... ...|..+++|+++
T Consensus 38 w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~e~~~~~W~~~ 113 (155)
T 2b06_A 38 YAFPGGHVENDEAFAESVIREIYEETGLTIQNPQL-VGIKNWPLD-TGGRYIVICYKATEFSGTL--QSSEEGEVSWVQK 113 (155)
T ss_dssp EECCCCBCCTTSCHHHHHHHHHHHHHSEEEESCEE-EEEEEEECT-TSCEEEEEEEEECEEEECC--CCBTTBEEEEEEG
T ss_pred EeccceecCCCCCHHHHHHHHHHHHhCccccCCcE-EEEEeeccC-CCceEEEEEEEEEecCCCC--CCCcceeeEEeeH
Confidence 68999999999999999999999999999987776 777666543 2344556677766443321 2256778999999
Q ss_pred HHHHHhcCchhHHHHHHHHHHH
Q 033333 81 AEARKVCQHWWMKEALDRLVMR 102 (121)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~ 102 (121)
+++.++...+.++.+++.+...
T Consensus 114 ~el~~~~~~~~~~~~l~~~~~~ 135 (155)
T 2b06_A 114 DQIPNLNLAYDMLPLMEMMEAP 135 (155)
T ss_dssp GGGGGSCBCTTHHHHHHHHHCT
T ss_pred HHhhhCCCChhHHHHHHHHhCC
Confidence 9999987778888887766643
No 27
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.80 E-value=2e-19 Score=115.54 Aligned_cols=102 Identities=18% Similarity=0.118 Sum_probs=72.4
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeE-----------eee-------CC-CCCeeEEEEEEeEec
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWN-----------FKS-------RA-HNTDYQGYMFPLLVQ 61 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~-----------~~~-------~~-~~~~~~~~~f~~~~~ 61 (121)
|.||||++++||++.+||+||++||||+.+..... ++.+. +.. .. .....+.++|.+...
T Consensus 30 w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~f~~~~~ 108 (159)
T 3f6a_A 30 MLPLGGHIEVNELPEEACIREAKEEAGLNVTLYNP-IDINLKKSCDLSGEKLLINPIHTILGDVSPNHSHIDFVYYATTT 108 (159)
T ss_dssp EECEEEECCTTCCHHHHHHHHHHHHHCCCCEECCC-CCHHHHHHHHHTTCEEECCCSEEEEECSSSSSCEEEEEEEEECS
T ss_pred EECCccCccCCCCHHHHHHHHHHHHhCCCceeccc-ccccccccccccccccccCccccccccCCCCceEEEEEEEEEeC
Confidence 89999999999999999999999999999988776 64321 000 00 112245567888766
Q ss_pred ccccccccCCcceeEEEeHHHHHHhc-CchhHHHHHHHHHHHh
Q 033333 62 DQLAEWPEKNVRSRKWMSVAEARKVC-QHWWMKEALDRLVMRL 103 (121)
Q Consensus 62 ~~~~~~~~~e~~~~~W~~~~~l~~~~-~~~~~~~~~~~~~~~~ 103 (121)
........+|..+++|++++++.++. ....++.+.+...+..
T Consensus 109 ~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~~ 151 (159)
T 3f6a_A 109 SFETSPEIGESKILKWYSKEDLKNAHNIQENILVMATEALDLL 151 (159)
T ss_dssp CSCCCCCTTSCCCEEEECSSSSTTCSSSCHHHHHHHHHHHHHC
T ss_pred CCCcCCCCCcccceEEeeHHHHhhCcCCChhHHHHHHHHHHHH
Confidence 55443334688889999999999986 5565555655555443
No 28
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.80 E-value=2.6e-19 Score=114.87 Aligned_cols=99 Identities=17% Similarity=0.064 Sum_probs=73.0
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecc-eeeeeEeeeCCCCCeeEEEEEEeEecccccccccCCcceeEEEe
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECE-LLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMS 79 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~-~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~ 79 (121)
|.||||++++||++.+||+||++||||+.+....+ .++.+.+.. .+.....++|.+...... ....|..+++|++
T Consensus 58 w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~e~~~~~W~~ 133 (158)
T 3hhj_A 58 WEFPGGKVEQGETPEASLIRELEEELGVHVQADNLFPLTFASHGY--ETFHLLMPLYFCSHYKGV--AQGREGQNLKWIF 133 (158)
T ss_dssp CBCCEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEEC--SSCEEEEEEEEESCCBSC--CCCTTSCEEEEEE
T ss_pred EECCceeecCCCCHHHHHHHHHHHHhCcEeecceEEEEEEEeecc--CCcEEEEEEEEEEECCCc--cCCccccceEEEc
Confidence 89999999999999999999999999999876543 133333332 333445567776654432 2235677899999
Q ss_pred HHHHHHhcCchhHHHHHHHHHHHh
Q 033333 80 VAEARKVCQHWWMKEALDRLVMRL 103 (121)
Q Consensus 80 ~~~l~~~~~~~~~~~~~~~~~~~~ 103 (121)
++++.++...+.++.++..+.+++
T Consensus 134 ~~el~~~~~~~~~~~il~~~~~~l 157 (158)
T 3hhj_A 134 INDLDKYPMPEADKPLVQVLKNFF 157 (158)
T ss_dssp GGGGGGSCCCTTTHHHHHHHHHC-
T ss_pred HHHHhhCCCCcchHHHHHHHHHhc
Confidence 999999888888888888776543
No 29
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.80 E-value=1.1e-19 Score=116.20 Aligned_cols=87 Identities=21% Similarity=0.287 Sum_probs=62.0
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeee-----EeeeCCCCC-eeEEEEEEeEecccccccccCCcce
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEW-----NFKSRAHNT-DYQGYMFPLLVQDQLAEWPEKNVRS 74 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~-----~~~~~~~~~-~~~~~~f~~~~~~~~~~~~~~e~~~ 74 (121)
|.||||++++||++.+||+||++||||+.+..... ++.+ .+....... ....++|.+...........+|..+
T Consensus 45 w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~E~~~ 123 (153)
T 3eds_A 45 WSLPAGAIELGETPEEAVVREVWEETGLKVQVKKQ-KGVFGGKEYRYTYSNGDEVEYIVVVFECEVTSGELRSIDGESLK 123 (153)
T ss_dssp BBCSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEE-EEEECSGGGEEECTTSCEEEEEEEEEEEEEEEECCC-------C
T ss_pred EECCccccCCCCCHHHHHHHHHHHHHCccceeeeE-EEEecccceeeecCCCCeEEEEEEEEEEEecCCccccCCCcEEE
Confidence 89999999999999999999999999999988776 7765 233333222 3356777777665444334467788
Q ss_pred eEEEeHHHHHHhcC
Q 033333 75 RKWMSVAEARKVCQ 88 (121)
Q Consensus 75 ~~W~~~~~l~~~~~ 88 (121)
++|++++++.++..
T Consensus 124 ~~W~~~~el~~l~~ 137 (153)
T 3eds_A 124 LQYFSLSEKPPLAL 137 (153)
T ss_dssp EEEECGGGCCCBSS
T ss_pred EEEECHHHCchhcc
Confidence 99999999988743
No 30
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.80 E-value=4.6e-19 Score=112.47 Aligned_cols=86 Identities=21% Similarity=0.156 Sum_probs=58.6
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEe-cccccccccCCcceeEEEe
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLV-QDQLAEWPEKNVRSRKWMS 79 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~-~~~~~~~~~~e~~~~~W~~ 79 (121)
|.||||++++||++++||+||++||||+.+..... ++.+. ... .......++|.+.. .........+|..+++|++
T Consensus 34 w~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~-l~~~~-~~~-~~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~w~~ 110 (145)
T 2w4e_A 34 TEIVAGGVEKGEDLGAAAARELLEEVGGAASEWVP-LPGFY-PQP-SISGVVFYPLLALGVTLGAAQLEDTETIERVVLP 110 (145)
T ss_dssp EECEEEECCTTCCHHHHHHHHHHHHHCEECSEEEE-CCCBB-SCT-TTCCCEEEEEEEEEEEEC--------CEEEEEEE
T ss_pred EEeCCccCCCCCCHHHHHHHHHHHhhCCccCeEEE-EecCc-CCC-CccCceEEEEEEEecccCCCCCCCCCeEEEEEEe
Confidence 89999999999999999999999999999876665 66542 222 22223456666653 2222222346778899999
Q ss_pred HHHHHHhcCc
Q 033333 80 VAEARKVCQH 89 (121)
Q Consensus 80 ~~~l~~~~~~ 89 (121)
++++.+++.+
T Consensus 111 ~~el~~~~~~ 120 (145)
T 2w4e_A 111 LAEVYRMLEA 120 (145)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 9999987543
No 31
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.79 E-value=2e-19 Score=113.45 Aligned_cols=101 Identities=17% Similarity=0.066 Sum_probs=74.3
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEecccccccccCCcceeEEEeH
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSV 80 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~ 80 (121)
|.||||++++||++.+||+||++||||+.+....+ .......+...+.....++|.+...... ....|..+++|+++
T Consensus 37 w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~e~~~~~W~~~ 113 (144)
T 3r03_A 37 WEFPGGKLEPGETPEAALVRELAEELGVDTRASCL-APLAFASHSYDTFHLLMPLYACRSWRGR--ATAREGQTLAWVRA 113 (144)
T ss_dssp EECSEEECCTTCCHHHHHHHHHHHHHCCBCCGGGC-EEEEEEEEECSSSEEEEEEEEECCCBSC--CCCCSSCEEEEECG
T ss_pred EECCCcEecCCCCHHHHHHHHHHHHhCceeeccce-EEEEeeeccCCCeEEEEEEEEEEecCCc--cCCCCcceEEEEeH
Confidence 89999999999999999999999999999877643 3332222223334455677777655432 22356778999999
Q ss_pred HHHHHhcCchhHHHHHHHHHHHhc
Q 033333 81 AEARKVCQHWWMKEALDRLVMRLT 104 (121)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~ 104 (121)
+++.++...+.++.+++.+.+...
T Consensus 114 ~el~~~~~~~~~~~~l~~~~~~~~ 137 (144)
T 3r03_A 114 ERLREYPMPPADLPLIPILQDWLE 137 (144)
T ss_dssp GGGGGSCCCTTTTTHHHHHHHHC-
T ss_pred HHhccCCCCcchHHHHHHHhCccc
Confidence 999999888888888887666543
No 32
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.79 E-value=1.1e-18 Score=114.08 Aligned_cols=102 Identities=25% Similarity=0.310 Sum_probs=73.2
Q ss_pred Ccc-CCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEecccccccccCCcceeEEEe
Q 033333 1 MLF-PKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMS 79 (121)
Q Consensus 1 W~l-PgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~ 79 (121)
|.| |||++++||++.+||+||++||||+.+..... ++.+.+... ......++|.+.... ......+|..+++|++
T Consensus 67 w~l~pGG~ve~gE~~~~aa~REl~EEtGl~~~~~~~-l~~~~~~~~--~~~~~~~~f~~~~~~-~~~~~~~E~~~~~W~~ 142 (180)
T 2fkb_A 67 LDATAGGVVQADEQLLESARREAEEELGIAGVPFAE-HGQFYFEDK--NCRVWGALFSCVSHG-PFALQEDEVSEVCWLT 142 (180)
T ss_dssp EESSBCCBCBTTCCHHHHHHHHHHHHHCCBSCCCEE-EEEEEEEET--TEEEEEEEEEEECCC-CCCCCTTTEEEEEEEC
T ss_pred EEeecCCCCCCCCCHHHHHHHHHHHHHCCCccceEE-EEEEEecCC--CceEEEEEEEEecCC-CcCCChhHhheEEEec
Confidence 788 99999999999999999999999998776666 777655433 234456777776332 2222346778899999
Q ss_pred HHHHHHhc--CchhHHHHHHHHHHHhccc
Q 033333 80 VAEARKVC--QHWWMKEALDRLVMRLTSQ 106 (121)
Q Consensus 80 ~~~l~~~~--~~~~~~~~~~~~~~~~~~~ 106 (121)
++++.+++ ..+..+.++..++......
T Consensus 143 ~~el~~~~~~~~~~~~~~l~~~~~~~~~~ 171 (180)
T 2fkb_A 143 PEEITARCDEFTPDSLKALALWMKRNAKN 171 (180)
T ss_dssp HHHHHTTGGGBCHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHhhcCC
Confidence 99999973 3566677777766654443
No 33
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.79 E-value=1.6e-19 Score=115.76 Aligned_cols=97 Identities=16% Similarity=0.131 Sum_probs=69.8
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEe-----------------eeCCCCCeeEEEEEEeEeccc
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNF-----------------KSRAHNTDYQGYMFPLLVQDQ 63 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~-----------------~~~~~~~~~~~~~f~~~~~~~ 63 (121)
|.||||++++||++.+||+||++||||+.+..... ++.+.+ ..+.........+|.+...
T Consensus 25 W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~-- 101 (156)
T 1k2e_A 25 YIYPGGHVEHNETPIEAVKREFEEETGIVVEPIGF-TYGIIDENAVERPMPLVILEEVVKYPEETHIHFDLIYLVKRV-- 101 (156)
T ss_dssp EECSEEECCTTCCHHHHHHHHHHHHHSEEEEECCC-CCCCBSSSEEECCCCSEEEEEEEECSSCEEEEEEEEEEEEEE--
T ss_pred EECCeeecCCCCCHHHHHHHHHHHHHCCcceeccc-eeeecccccccccccceeeeeeecCCCCceEEEEEEEEEEec--
Confidence 89999999999999999999999999999887665 442211 1111111123344555532
Q ss_pred ccccccCCcceeEEEeHHHHHHhcCchhHHHHHHHHHHHhcc
Q 033333 64 LAEWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLTS 105 (121)
Q Consensus 64 ~~~~~~~e~~~~~W~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 105 (121)
..+..+++|++++++.++...+..+.++..+.+.+..
T Consensus 102 -----~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~ 138 (156)
T 1k2e_A 102 -----GGDLKNGEWIDVREIDRIETFPNVRKVVSLALSTLYR 138 (156)
T ss_dssp -----EECCCSCEEEEGGGGGGSCBSTTHHHHHHHHHHHHHH
T ss_pred -----CCcEeeeEEeCHHHHhcCCCChHHHHHHHHHHHHHHh
Confidence 2346679999999999887778888888888776554
No 34
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.79 E-value=1.5e-19 Score=117.31 Aligned_cols=99 Identities=15% Similarity=0.089 Sum_probs=71.3
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEeccccccc-----ccCCccee
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEW-----PEKNVRSR 75 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~-----~~~e~~~~ 75 (121)
|.||||++++||++.+||+||++||||+.+..... ++.+.+.... .....++|.+......... ..+|..++
T Consensus 48 w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~ 124 (171)
T 3id9_A 48 WSLPGGRVENGETLEEAMIREMREETGLEVKIKKL-LYVCDKPDAS--PSLLHITFLLERIEGEITLPSNEFDHNPIHDV 124 (171)
T ss_dssp EECCEEECCTTCCHHHHHHHHHHHHHCCCEEEEEE-EEEEEETTSS--SCEEEEEEEEEEC-------------CCCCCE
T ss_pred EECCCccCCCCCCHHHHHHHHHHHHHCCccccceE-EEEEcccCCC--CcEEEEEEEEEEcCCcccCCccCCCcCeeeeE
Confidence 89999999999999999999999999999987776 7776554332 2234455666554433222 22567789
Q ss_pred EEEeHHHHHHhcCchhHHHHHHHHHHH
Q 033333 76 KWMSVAEARKVCQHWWMKEALDRLVMR 102 (121)
Q Consensus 76 ~W~~~~~l~~~~~~~~~~~~~~~~~~~ 102 (121)
+|++++++.++...+.++.++...+..
T Consensus 125 ~w~~~~el~~~~~~~~~~~~l~~~~~~ 151 (171)
T 3id9_A 125 QMVPINELSYYGFSETFINLISGGLAN 151 (171)
T ss_dssp EEEETGGGGGGTCCTTCSHHHHHGGGG
T ss_pred EEEeHHHHhhCCCCHHHHHHHHHhhcc
Confidence 999999999998778777777766443
No 35
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.79 E-value=6.2e-19 Score=110.58 Aligned_cols=97 Identities=19% Similarity=0.080 Sum_probs=75.1
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEecccccccccCCcceeEEEeH
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSV 80 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~ 80 (121)
|.||||++++||++++||+||++||||+.+..... ++.+.+..+. .....++|.+...... ....|..+++|+++
T Consensus 37 w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~e~~~~~W~~~ 111 (140)
T 2rrk_A 37 WEFAGGKVEPDESQRQALVRELREELGIEATVGEY-VASHQREVSG--RIIHLHAWHVPDFHGT--LQAHEHQALVWCSP 111 (140)
T ss_dssp EECCEEECCTTSCHHHHHHHHHHHHSCEEEECCEE-EEEEEEEETT--EEEEEEEEEESEEEEC--CCCSSCSCEEEECH
T ss_pred EECCceecCCCCCHHHHHHHHHHHHHCCeeecccE-EEEEEEecCC--cEEEEEEEEEEeeCCC--cCCCccceeEEeCH
Confidence 89999999999999999999999999999987776 7776655442 2344566766544332 12346678999999
Q ss_pred HHHHHhcCchhHHHHHHHHHHH
Q 033333 81 AEARKVCQHWWMKEALDRLVMR 102 (121)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~ 102 (121)
+++.++...+.++.++..+.+.
T Consensus 112 ~el~~~~~~~~~~~~l~~~~~~ 133 (140)
T 2rrk_A 112 EEALQYPLAPADIPLLEAFMAL 133 (140)
T ss_dssp HHHTTSCCCTTHHHHHHHHHHH
T ss_pred HHHhhCCCChhHHHHHHHHHHH
Confidence 9999988888888888887754
No 36
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.79 E-value=3.8e-19 Score=113.94 Aligned_cols=98 Identities=18% Similarity=0.209 Sum_probs=70.2
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceee--eecceeeeeEeeeCCC------CCeeEEEEEEeEecccccccccCCc
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGI--VECELLGEWNFKSRAH------NTDYQGYMFPLLVQDQLAEWPEKNV 72 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~--~~~~~l~~~~~~~~~~------~~~~~~~~f~~~~~~~~~~~~~~e~ 72 (121)
|.||||++++||++.+||+||++||||+.+. .... ++.+.+..... ..+...++|.+...........+|.
T Consensus 46 w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~ 124 (160)
T 1rya_A 46 WFVPGGRVQKDETLEAAFERLTMAELGLRLPITAGQF-YGVWQHFYDDNFSGTDFTTHYVVLGFRFRVSEEELLLPDEQH 124 (160)
T ss_dssp EECCEEECCTTCCHHHHHHHHHHHHHSSCCCGGGSEE-EEEEEEEESSBTTBSSSCEEEEEEEEEEECCGGGCCCCSSSE
T ss_pred EECCccccCCCCCHHHHHHHHHHHHHCCCCCcccceE-EEEEeEEEcccccCCCcCcEEEEEEEEEEcCccccccCCCcc
Confidence 8999999999999999999999999999964 3444 66665543321 1245567777776544332334677
Q ss_pred ceeEEEeHHHHHHhc-CchhHHHHHHHH
Q 033333 73 RSRKWMSVAEARKVC-QHWWMKEALDRL 99 (121)
Q Consensus 73 ~~~~W~~~~~l~~~~-~~~~~~~~~~~~ 99 (121)
.+++|++++++.++. ..+..+.+++..
T Consensus 125 ~~~~W~~~~el~~~~~~~~~~~~~l~~~ 152 (160)
T 1rya_A 125 DDYRWLTSDALLASDNVHANSRAYFLAE 152 (160)
T ss_dssp EEEEEECHHHHHHCTTBCHHHHGGGCHH
T ss_pred ceEEEecHHHHhhccccCHHHHHHHHHH
Confidence 889999999999873 456555555543
No 37
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.79 E-value=5.2e-19 Score=112.36 Aligned_cols=99 Identities=19% Similarity=0.117 Sum_probs=78.3
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEecccccccccCCcceeEEEeH
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSV 80 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~ 80 (121)
|.||||++++||++.+||+||+.||||+.+..... ++.+.+.... .....++|.+...... ....|..+++|+++
T Consensus 50 w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~e~~~~~W~~~ 124 (153)
T 3ees_A 50 WEFPGGKIENGETPEEALARELNEELGIEAEVGEL-KLACTHSYGD--VGILILFYEILYWKGE--PRAKHHMMLEWIHP 124 (153)
T ss_dssp EECSEEECCTTCCHHHHHHHHHHHHHSCEEECCCE-EEEEEEEETT--EEEEEEEEEECEEESC--CCCSSSSEEEEECG
T ss_pred EECCceeeCCCCCHHHHHHHHHHHHHCCccccCce-EEEEEEecCC--CeEEEEEEEEEECCCC--cCCCccceEEEecH
Confidence 89999999999999999999999999999988777 7776655442 3334566776654432 22356778999999
Q ss_pred HHHHHhcCchhHHHHHHHHHHHhc
Q 033333 81 AEARKVCQHWWMKEALDRLVMRLT 104 (121)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~ 104 (121)
+++.++...+..+.++..+.+.+.
T Consensus 125 ~el~~~~~~~~~~~~l~~~~~~~~ 148 (153)
T 3ees_A 125 EELKHRNIPEANRKILHKIYKALG 148 (153)
T ss_dssp GGGGGSCCCHHHHTTHHHHHHHTT
T ss_pred HHhhhCCCCcchHHHHHHHHHhhc
Confidence 999998888888888888877654
No 38
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.79 E-value=1.7e-19 Score=119.29 Aligned_cols=100 Identities=18% Similarity=0.119 Sum_probs=75.6
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCe---eEEEEEEeEecccccccccCCcceeEE
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTD---YQGYMFPLLVQDQLAEWPEKNVRSRKW 77 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~---~~~~~f~~~~~~~~~~~~~~e~~~~~W 77 (121)
|.||||++++||++.+||+||++||||+.+....+ ++.+.+........ ...++|.+....... .+..+..+++|
T Consensus 28 W~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~f~a~~~~~~~-~~~~e~~~~~W 105 (188)
T 3fk9_A 28 WVAPGGKMEAGESILETVKREYWEETGITVKNPEL-KGIFSMVIFDEGKIVSEWMLFTFKATEHEGEM-LKQSPEGKLEW 105 (188)
T ss_dssp EECCEEECCTTCCHHHHHHHHHHHHHSCEESSCEE-EEEEEEEEEETTEEEEEEEEEEEEESCEESCC-CSEETTEEEEE
T ss_pred EECCeecccCCCCHHHHHHHHHHHHHCCCCCCceE-EEEEEEEecCCCcceEEEEEEEEEEECCCCCC-cCCCCCEeEEE
Confidence 89999999999999999999999999999887776 78777655433321 245666665443332 23345568999
Q ss_pred EeHHHHHHhcCchhHHHHHHHHHHH
Q 033333 78 MSVAEARKVCQHWWMKEALDRLVMR 102 (121)
Q Consensus 78 ~~~~~l~~~~~~~~~~~~~~~~~~~ 102 (121)
++++++..+...+..+.++..+.+.
T Consensus 106 ~~~~el~~~~l~~~~~~~l~~~l~~ 130 (188)
T 3fk9_A 106 KKKDEVLELPMAAGDKWIFKHVLHS 130 (188)
T ss_dssp EEGGGGGGSCCCHHHHHHHHHHTTC
T ss_pred EEHHHhhhCCCCHHHHHHHHHHHcC
Confidence 9999999887778888888777654
No 39
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.78 E-value=5.2e-19 Score=114.14 Aligned_cols=96 Identities=18% Similarity=0.083 Sum_probs=65.6
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeee------EeeeCCCCCe---eEEEEEEeEecccccccccCC
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEW------NFKSRAHNTD---YQGYMFPLLVQDQLAEWPEKN 71 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~------~~~~~~~~~~---~~~~~f~~~~~~~~~~~~~~e 71 (121)
|.||||++++||++.+||+||++||||+.+..... ++.. .+........ ....+|.+....... .+.+|
T Consensus 57 w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~E 134 (165)
T 3oga_A 57 WALSGGGVEPGERIEEALRREIREELGEQLILSDI-TPWTFRDDIRIKTYADGRQEEIYMIYLIFDCVSANRDI-CINDE 134 (165)
T ss_dssp EECCCEECCTTCCHHHHHHHHHHHHHCSSCCEEEE-EEEEEEEEEEEEEC--CCEEEEEEEEEEEEEEESCCCC-CCCTT
T ss_pred EECCccccCCCCCHHHHHHHHHHHHhCCCccccce-eeeeeecceeeEecCCCCceeEEEEEEEEEeeccCCCc-cCCch
Confidence 89999999999999999999999999999876554 4321 1222222211 122344444433322 23367
Q ss_pred cceeEEEeHHHHHHhcCchhHHHHHHH
Q 033333 72 VRSRKWMSVAEARKVCQHWWMKEALDR 98 (121)
Q Consensus 72 ~~~~~W~~~~~l~~~~~~~~~~~~~~~ 98 (121)
..+++|++++++.++...+..+.+++.
T Consensus 135 ~~~~~W~~~~el~~~~~~~~~~~~l~~ 161 (165)
T 3oga_A 135 FQDYAWVKPEELALYDLNVATRHTLAL 161 (165)
T ss_dssp EEEEEEECGGGGGGSCBCHHHHHHHHH
T ss_pred heeeEEccHHHHhhCCCCHHHHHHHHH
Confidence 788999999999998777877777664
No 40
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.78 E-value=2.2e-18 Score=114.65 Aligned_cols=98 Identities=17% Similarity=0.205 Sum_probs=63.0
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeE-eeeCCCCCeeEEEEEEeEeccc--ccccccCCcceeEE
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWN-FKSRAHNTDYQGYMFPLLVQDQ--LAEWPEKNVRSRKW 77 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~-~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~e~~~~~W 77 (121)
|.||||++++||++++||+||++||||+.+....+ ++... +..+ ........+|.+..... ......+|..+++|
T Consensus 54 w~lPGG~ve~gEs~~~aA~REl~EEtGl~~~~~~l-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W 131 (199)
T 3h95_A 54 WKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSV-LSIRQQHTNP-GAFGKSDMYIICRLKPYSFTINFCQEECLRCEW 131 (199)
T ss_dssp BBCCEEECCTTCCHHHHHHHHHHHHHCCCEEEEEE-EEEEECC----------CEEEEEEEEESCCCCCCCTTTEEEEEE
T ss_pred EECCccccCCCCCHHHHHHHHHHHHhCCccccceE-EEEEeeecCC-CCceeEEEEEEEEEcCCCcccCCCccceeeeEE
Confidence 89999999999999999999999999999887666 66422 2222 11112223444443322 22223467888999
Q ss_pred EeHHHHHHhcCchhHH-HHHHHHH
Q 033333 78 MSVAEARKVCQHWWMK-EALDRLV 100 (121)
Q Consensus 78 ~~~~~l~~~~~~~~~~-~~~~~~~ 100 (121)
++++++.++.....+. .++..+.
T Consensus 132 ~~~~el~~~~~~~~~~~~~~~~~~ 155 (199)
T 3h95_A 132 MDLNDLAKTENTTPITSRVARLLL 155 (199)
T ss_dssp EEHHHHHHCSSBCHHHHHHHHHHH
T ss_pred EeHHHHhhhhhcChHHHHHHHHHH
Confidence 9999999976544333 3333333
No 41
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.77 E-value=4.7e-19 Score=118.04 Aligned_cols=89 Identities=18% Similarity=-0.001 Sum_probs=66.1
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEeccccccc-ccCCcceeEEEe
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEW-PEKNVRSRKWMS 79 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~-~~~e~~~~~W~~ 79 (121)
|.||||++++||++++||+||++||||+.+..... ++.+.+. . .......++|.+......... ..+|..+++|++
T Consensus 77 welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~-l~~~~~~-~-~~~~~~~~~f~a~~~~~~~~~~~~~E~~~~~w~~ 153 (198)
T 1vhz_A 77 LGFSKGLIDPGESVYEAANRELKEEVGFGANDLTF-LKKLSMA-P-SYFSSKMNIVVAQDLYPESLEGDEPEPLPQVRWP 153 (198)
T ss_dssp EECEEEECCTTCCHHHHHHHHHHHHHSEEEEEEEE-EEEEECC-T-TTCCCEEEEEEEEEEEECCCCCCCSSCCCEEEEE
T ss_pred EEeCcccCCCCcCHHHHHHHHHHHHHCCCcCceEE-EEEEeCC-C-CccCcEEEEEEEEeCCcccCCCCCCceEEEEEEE
Confidence 89999999999999999999999999999987776 7776432 2 222234566776654332222 236777899999
Q ss_pred HHHHHHhcCchhH
Q 033333 80 VAEARKVCQHWWM 92 (121)
Q Consensus 80 ~~~l~~~~~~~~~ 92 (121)
++++.+++.++.+
T Consensus 154 ~~el~~~~~~~~i 166 (198)
T 1vhz_A 154 LAHMMDLLEDPDF 166 (198)
T ss_dssp GGGGGGGGGCTTT
T ss_pred HHHHHHHHHcCCC
Confidence 9999998765543
No 42
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.77 E-value=1.8e-18 Score=114.30 Aligned_cols=99 Identities=17% Similarity=0.164 Sum_probs=74.7
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEecccccccccCCcceeEEEeH
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSV 80 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~ 80 (121)
|.||||++++||++++||+||++||||+.+....+ ++.+.+.. .....++|.+....... .+.+|..+++|+++
T Consensus 67 w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~~~~~~~~----~~~~~~~f~~~~~~~~~-~~~~E~~~~~W~~~ 140 (189)
T 3cng_A 67 WTLPAGFMENNETLVQGAARETLEEANARVEIREL-YAVYSLPH----ISQVYMLFRAKLLDLDF-FPGIESLEVRLFGE 140 (189)
T ss_dssp EECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEEE-EEEEEEGG----GTEEEEEEEEEECCSCC-CCCTTEEEEEEECT
T ss_pred EECceeeccCCCCHHHHHHHHHHHHHCCcccccee-EEEEecCC----CcEEEEEEEEEeCCCcc-CCCccceeEEEECH
Confidence 89999999999999999999999999999887765 66654422 23456778877655432 33567788999999
Q ss_pred HHHH-HhcCchhHHHHHHHHHHHhcc
Q 033333 81 AEAR-KVCQHWWMKEALDRLVMRLTS 105 (121)
Q Consensus 81 ~~l~-~~~~~~~~~~~~~~~~~~~~~ 105 (121)
+++. ..+..+..+.++..+++....
T Consensus 141 ~el~~~~l~~~~~~~~l~~~l~~~~~ 166 (189)
T 3cng_A 141 QEIPWNDIAFRVIHDPLKRYMEERHH 166 (189)
T ss_dssp TTCCGGGBSCHHHHHHHHHHHHHHHH
T ss_pred HHcCcccccChHHHHHHHHHHHhccC
Confidence 9998 345567777777777765443
No 43
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.77 E-value=7.9e-19 Score=112.05 Aligned_cols=89 Identities=12% Similarity=0.143 Sum_probs=65.1
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCC--eeEEEEEEeEecccccc--cccCCcceeE
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNT--DYQGYMFPLLVQDQLAE--WPEKNVRSRK 76 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~--~~~~~~f~~~~~~~~~~--~~~~e~~~~~ 76 (121)
|.||||++++||++.+||+||++||||+.+..... ++.+.+.....+. ....++|.+........ ...++..+++
T Consensus 41 w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~ 119 (154)
T 2pqv_A 41 YYTIGGAIQVNESTEDAVVREVKEELGVKAQAGQL-AFVVENRFEVDGVSYHNIEFHYLVDLLEDAPLTMQEDEKRQPCE 119 (154)
T ss_dssp EECEEEECBTTCCHHHHHHHHHHHHHCCCEEEEEE-EEEEEEEEEETTEEEEEEEEEEEEEESSCCCSEEEETTEEEEEE
T ss_pred EECcccCcCCCCCHHHHHHHHHHHHhCCeeeeceE-EEEEeeeecCCCCcceEEEEEEEEEecCCCCcccCCCCceeeEE
Confidence 89999999999999999999999999999987776 6665543332222 23456777776544322 1234567899
Q ss_pred EEeHHHHHHhcCch
Q 033333 77 WMSVAEARKVCQHW 90 (121)
Q Consensus 77 W~~~~~l~~~~~~~ 90 (121)
|++++++..+...+
T Consensus 120 W~~~~el~~~~~~~ 133 (154)
T 2pqv_A 120 WIDLDKLQNIQLVP 133 (154)
T ss_dssp EEEGGGGGGSCEES
T ss_pred EeEHHHHhhcCcCc
Confidence 99999999875444
No 44
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.76 E-value=2e-18 Score=111.87 Aligned_cols=94 Identities=17% Similarity=0.068 Sum_probs=68.6
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEecccccccccCCcceeEEEeH
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSV 80 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~ 80 (121)
|.||||++++||++.+||+||++||||+.+..... ++.+.+.. ...++|.+..... ..+.+|..+++|++
T Consensus 39 w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-l~~~~~~~------~~~~~f~~~~~~~--~~~~~E~~~~~W~~- 108 (163)
T 3f13_A 39 YNLPGGKANRGELRSQALIREIREETGLRINSMLY-LFDHITPF------NAHKVYLCIAQGQ--PKPQNEIERIALVS- 108 (163)
T ss_dssp BBCSEEECCTTCCHHHHHHHHHHHHHCCCCCEEEE-EEEEECSS------EEEEEEEEEC-CC--CCCCTTCCEEEEES-
T ss_pred EECCceeCCCCCCHHHHHHHHHHHHHCcccceeEE-EEEEecCC------eEEEEEEEEECCc--CccCCCceEEEEEC-
Confidence 89999999999999999999999999999988776 76654321 3456677765432 23335778899999
Q ss_pred HHHHHhcCchhHHHHHHHHHHHhc
Q 033333 81 AEARKVCQHWWMKEALDRLVMRLT 104 (121)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~ 104 (121)
.+...+...+..+.++..+.+...
T Consensus 109 ~~~~~~~l~~~~~~il~~~~~~~~ 132 (163)
T 3f13_A 109 SPDTDMDLFVEGRAILRRYARLRN 132 (163)
T ss_dssp STTCSSCBCHHHHHHHHHHHHHTT
T ss_pred cccccCCCCHHHHHHHHHHHHhhh
Confidence 444444555777778887776544
No 45
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.76 E-value=5.2e-19 Score=116.78 Aligned_cols=99 Identities=15% Similarity=0.167 Sum_probs=69.9
Q ss_pred Ccc-CCcccCCCCCHHHHHHHHHHHHhCceeeee-cceeeeeEeeeCCC-C--CeeEEEEEEeEecccccccccCCccee
Q 033333 1 MLF-PKGGWEIDESIQEAALRETIEEAGVTGIVE-CELLGEWNFKSRAH-N--TDYQGYMFPLLVQDQLAEWPEKNVRSR 75 (121)
Q Consensus 1 W~l-PgG~ve~gE~~~eaa~REl~EEtG~~~~~~-~~~l~~~~~~~~~~-~--~~~~~~~f~~~~~~~~~~~~~~e~~~~ 75 (121)
|.| |||++++||++++||+||++||||+.+... .. ++.+.+..... + .....++|.+...... ....+|..++
T Consensus 62 w~~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~-~~~~~E~~~~ 139 (190)
T 1hzt_A 62 WTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESI-YPDFRYRATDPSGIVENEVCPVFAARTTSAL-QINDDEVMDY 139 (190)
T ss_dssp EEESEEECCCTTCCHHHHHHHHHHHHHCCCBSCCEEE-ETTCEEEEECTTSCEEEEECCEEEEEBCSCC-CCCTTTEEEE
T ss_pred ccCcccccCCCCCCHHHHHHHHHHHHHCCCchhhhee-eeeEEEEeeCCCCCcceEEEEEEEEecCCCC-cCCccceeeE
Confidence 789 999999999999999999999999998776 55 67666543222 1 1334567777754422 2234677889
Q ss_pred EEEeHHHHHHhcC------chhHHHHHHHHHH
Q 033333 76 KWMSVAEARKVCQ------HWWMKEALDRLVM 101 (121)
Q Consensus 76 ~W~~~~~l~~~~~------~~~~~~~~~~~~~ 101 (121)
+|++++++.+++. .+.++.++..+..
T Consensus 140 ~W~~~~el~~~~~~~~~~~~p~~~~~~~~~~~ 171 (190)
T 1hzt_A 140 QWCDLADVLHGIDATPWAFSPWMVMQATNREA 171 (190)
T ss_dssp EEECHHHHHHHHHHCGGGBCHHHHHHHHSHHH
T ss_pred EEecHHHHHHHHHcChhhcCchHHHHHHHHHH
Confidence 9999999998742 3445555555443
No 46
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.76 E-value=1.8e-18 Score=120.16 Aligned_cols=100 Identities=13% Similarity=0.050 Sum_probs=74.8
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEecccccccccCCcceeEEEeH
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSV 80 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~ 80 (121)
|.||||++|+|||+++||+||++||||+.+..... ++.+.+..+ ....++|.+...........+|..+++|+++
T Consensus 166 w~lPgG~vE~GEt~eeAa~REv~EEtGl~v~~~~~-~~~~~~~~~----~~~~~~f~a~~~~~~~~~~~~E~~~~~W~~~ 240 (269)
T 1vk6_A 166 HTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRY-VTSQPWPFP----QSLMTAFMAEYDSGDIVIDPKELLEANWYRY 240 (269)
T ss_dssp CBCEEEECCTTCCHHHHHHHHHHHHHCCEEEEEEE-EEEEEEETT----EEEEEEEEEEEEECCCCCCTTTEEEEEEEET
T ss_pred EECCcCcCCCCCCHHHHHHHHHHHHhCceeeeEEE-EEEEecCCC----CEEEEEEEEEECCCCcCCCCcceEEEEEEEH
Confidence 89999999999999999999999999999988777 777654332 2355677777655433333467888999999
Q ss_pred HHHHHhcCchhHH-HHHHHHHHHhcc
Q 033333 81 AEARKVCQHWWMK-EALDRLVMRLTS 105 (121)
Q Consensus 81 ~~l~~~~~~~~~~-~~~~~~~~~~~~ 105 (121)
+++..+.....+. .++..++.++++
T Consensus 241 ~el~~l~~~~si~~~li~~~l~~~r~ 266 (269)
T 1vk6_A 241 DDLPLLPPPGTVARRLIEDTVAMCRA 266 (269)
T ss_dssp TSCCSCCCTTSHHHHHHHHHHHHHHH
T ss_pred HHhhhcccCcHHHHHHHHHHHHHHHh
Confidence 9998876655443 566666666553
No 47
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.76 E-value=1.2e-17 Score=108.45 Aligned_cols=87 Identities=24% Similarity=0.133 Sum_probs=60.2
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEeccccccc-ccCCcceeEEEe
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEW-PEKNVRSRKWMS 79 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~-~~~e~~~~~W~~ 79 (121)
|.||||++++||++++||+||++||||+ +..... ++.+.+. . .......++|.+......... ..+|..+++|++
T Consensus 62 w~lPgG~ve~gEs~~~aa~REl~EEtGl-~~~~~~-l~~~~~~-~-~~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~ 137 (170)
T 1v8y_A 62 LEIPAGLIEPGEDPLEAARRELAEQTGL-SGDLTY-LFSYFVS-P-GFTDEKTHVFLAENLKEVEAHPDEDEAIEVVWMR 137 (170)
T ss_dssp BBCSEEECCTTCCHHHHHHHHHHHHHSE-EEEEEE-EEEEESC-T-TTBCCEEEEEEEEEEEECC--------CEEEEEC
T ss_pred EECCccccCCCCCHHHHHHHHHHHHHCC-CcCcee-eEEEecC-C-CccccEEEEEEEEeccccCCCCCCCceEEEEEEE
Confidence 8999999999999999999999999999 877766 7765322 2 222345567776654322222 236778899999
Q ss_pred HHHHHHhcCchh
Q 033333 80 VAEARKVCQHWW 91 (121)
Q Consensus 80 ~~~l~~~~~~~~ 91 (121)
++++.+++..+.
T Consensus 138 ~~el~~~~~~~~ 149 (170)
T 1v8y_A 138 PEEALERHQRGE 149 (170)
T ss_dssp HHHHHHHHHTTS
T ss_pred HHHHHHHHHCCC
Confidence 999999864443
No 48
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.75 E-value=4.4e-18 Score=109.26 Aligned_cols=104 Identities=16% Similarity=0.207 Sum_probs=66.7
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeee-eEeeeCC------------CCCeeEEEEEEeEeccccc--
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGE-WNFKSRA------------HNTDYQGYMFPLLVQDQLA-- 65 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~-~~~~~~~------------~~~~~~~~~f~~~~~~~~~-- 65 (121)
|.+|||++++||++++||+||++||||+.+......... +.+.... .......++|++.......
T Consensus 40 w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 119 (165)
T 1f3y_A 40 WQMPQGGIDEGEDPRNAAIRELREETGVTSAEVIAEVPYWLTYDFPPKVREKLNIQWGSDWKGQAQKWFLFKFTGQDQEI 119 (165)
T ss_dssp EECCEEECCTTCCHHHHHHHHHHHHHCCCSEEEEEECSSCCBCCCCHHHHHHHGGGSCSSCCSCBEEEEEEEECSCGGGC
T ss_pred EECCeeccCCCCCHHHHHHHHHHHhhCCChhhhhcccccceeeecCccccccccccccccccCceEEEEEEEecCCcccc
Confidence 899999999999999999999999999987532210110 1111110 0001134567766554321
Q ss_pred cc-----ccCCcceeEEEeHHHHHHhcCchhHHHHHHHHHHHhcc
Q 033333 66 EW-----PEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLTS 105 (121)
Q Consensus 66 ~~-----~~~e~~~~~W~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 105 (121)
.. ..+|..+++|++++++.++.... ....++.+.+.+.+
T Consensus 120 ~~~~~~~~~~E~~~~~W~~~~el~~~~~~~-~~~~~~~~~~~l~~ 163 (165)
T 1f3y_A 120 NLLGDGSEKPEFGEWSWVTPEQLIDLTVEF-KKPVYKEVLSVFAP 163 (165)
T ss_dssp CCCCCSSSCCSEEEEEEECHHHHHHHBCGG-GHHHHHHHHHHHGG
T ss_pred cccCCCCCCChhheeEEecHHHHHHHhhhh-hHHHHHHHHHHhhh
Confidence 11 23577889999999999987542 45666666666654
No 49
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.75 E-value=2.4e-18 Score=108.85 Aligned_cols=86 Identities=15% Similarity=0.193 Sum_probs=57.5
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEe-ccc--ccccccCCcceeEE
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLV-QDQ--LAEWPEKNVRSRKW 77 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~-~~~--~~~~~~~e~~~~~W 77 (121)
|.||||++++||++.+||+||++||||+.+..... +..+..... .+. ..++|.+.. ... ......+|..+++|
T Consensus 30 w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~-~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~E~~~~~W 105 (146)
T 2jvb_A 30 WSFPRGKISKDENDIDCCIREVKEEIGFDLTDYID-DNQFIERNI-QGK--NYKIFLISGVSEVFNFKPQVRNEIDKIEW 105 (146)
T ss_dssp CBCCEECCCSSSCHHHHHHHHHHHHTSCCCSSSSC-SSCEEEEEE-TTE--EEEEEEECCCCSSSCCCCCCSSSCCCEEE
T ss_pred EECCcccCCCCCCHHHHHHHHHHHHHCCCchHhcc-ccccccccc-CCc--eEEEEEEEeccccccCCcCCcchhheeEE
Confidence 89999999999999999999999999999865433 333322211 222 223444332 221 11122467788999
Q ss_pred EeHHHHHHhcCch
Q 033333 78 MSVAEARKVCQHW 90 (121)
Q Consensus 78 ~~~~~l~~~~~~~ 90 (121)
++++++.+++...
T Consensus 106 ~~~~el~~~~~~~ 118 (146)
T 2jvb_A 106 FDFKKISKTMYKS 118 (146)
T ss_dssp EEHHHHHTGGGCS
T ss_pred eEHHHHHhhhccc
Confidence 9999999976543
No 50
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.74 E-value=5.7e-18 Score=120.98 Aligned_cols=104 Identities=18% Similarity=0.153 Sum_probs=74.2
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceee----eeEeeeCCC--CCeeEEEEEEeEecccc--cc-cccCC
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLG----EWNFKSRAH--NTDYQGYMFPLLVQDQL--AE-WPEKN 71 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~----~~~~~~~~~--~~~~~~~~f~~~~~~~~--~~-~~~~e 71 (121)
|.||||++++||++++||+||++||||+.+....+ ++ ...+..+.. ..+...++|.+...... .. ...+|
T Consensus 235 w~lPgG~ve~gEt~~~aa~REl~EEtGl~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~E 313 (352)
T 2qjt_B 235 WALPGGFLECDETIAQAIIRELFEETNINLTHEQL-AIAKRCEKVFDYPDRSVRGRTISHVGLFVFDQWPSLPEINAADD 313 (352)
T ss_dssp EECSEEECCTTSCHHHHHHHHHHHHHCCSCCHHHH-HHHEEEEEEECCTTSCTTSEEEEEEEEEEECSCSSCCCCCCCTT
T ss_pred EECCCCcCCCCCCHHHHHHHHHHHhhCCCcccchh-cceeeeeEEecCCCCCCCccEEEEEEEEEEeCCCCCCccCCCcc
Confidence 89999999999999999999999999999875433 22 122222221 22334566666655433 11 22467
Q ss_pred cceeEEEeH-HHHHHh--cCchhHHHHHHHHHHHhcc
Q 033333 72 VRSRKWMSV-AEARKV--CQHWWMKEALDRLVMRLTS 105 (121)
Q Consensus 72 ~~~~~W~~~-~~l~~~--~~~~~~~~~~~~~~~~~~~ 105 (121)
..+++|+++ +++.++ ...+..+.++..+.+++.+
T Consensus 314 ~~~~~W~~~~~el~~~~~~~~~~~~~il~~~~~~l~~ 350 (352)
T 2qjt_B 314 AKDVKWISLGSNIKNICDRMLEDHYQIITILLEECGK 350 (352)
T ss_dssp EEEEEEEESSHHHHHTTTSBSTTHHHHHHHHHHHTC-
T ss_pred ceEEEEecHHHHHHhhhhhhChhHHHHHHHHHHHhcc
Confidence 888999999 999997 5678888999999888743
No 51
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.74 E-value=9e-18 Score=108.88 Aligned_cols=100 Identities=13% Similarity=0.078 Sum_probs=67.1
Q ss_pred Cc-cCCcccCCCCCHHHHHHHHHHHHhCceeeeecc-eeeeeE-eeeCCCCCeeEEEEEEeEecccccccccCCcceeEE
Q 033333 1 ML-FPKGGWEIDESIQEAALRETIEEAGVTGIVECE-LLGEWN-FKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKW 77 (121)
Q Consensus 1 W~-lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~-~l~~~~-~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W 77 (121)
|. ||||++++||++.+||+||++||||+.+..... .++.+. +... .. ...++|.+... ........|..+++|
T Consensus 64 w~~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~~--~~-~~~~~f~~~~~-~~~~~~~~E~~~~~W 139 (171)
T 1q27_A 64 LDVSVGGAVQSGETYEEAFRREAREELNVEIDALSWRPLASFSPFQTT--LS-SFMCVYELRSD-ATPIFNPNDISGGEW 139 (171)
T ss_dssp CCCSEEEECSSSSCHHHHHHHHHHHHHSCTTSSSCEEEEEEECSSSSC--CS-SEEEEEEEECC-CCCCSCTTTCSCCEE
T ss_pred cccccCccccCCCCHHHHHHHHHHHHHCCcccccceEEEEEEeccCCC--Cc-cEEEEEEEEEC-CccccCchhhheEEE
Confidence 87 999999999999999999999999999876431 144443 2222 22 25677777762 222222367778999
Q ss_pred EeHHHHHHhcC--chhHHHHHHHHHHHhc
Q 033333 78 MSVAEARKVCQ--HWWMKEALDRLVMRLT 104 (121)
Q Consensus 78 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~ 104 (121)
++++++.++.. ......++..+.+.+.
T Consensus 140 ~~~~el~~~~~~~~~~~~~~~~~l~~~~~ 168 (171)
T 1q27_A 140 LTPEHLLARIAAGEAAKGDLAELVRRCYR 168 (171)
T ss_dssp ECHHHHHHHHHHHSSCCHHHHHHHHHHHT
T ss_pred ecHHHHHHHHhcCCCCchhHHHHHHHHHh
Confidence 99999996532 2334456665555443
No 52
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.74 E-value=4e-18 Score=114.40 Aligned_cols=84 Identities=18% Similarity=0.007 Sum_probs=63.2
Q ss_pred Ccc-CCcccCCCCC--H----HHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEecccccccccCCcc
Q 033333 1 MLF-PKGGWEIDES--I----QEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVR 73 (121)
Q Consensus 1 W~l-PgG~ve~gE~--~----~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~ 73 (121)
|.+ |||+|++||+ + ++||+||++||||+++....+ ++.+.+.....+..++.++|.+...... ...++..
T Consensus 99 w~~gPGGhVE~GEs~~p~EtleeAa~REl~EEtGl~v~~~~~-ig~~~~~~~~~~~~~l~~~f~~~~~~g~--~~~~E~~ 175 (211)
T 3e57_A 99 YSLGIGGHVREGDGATPREAFLKGLEREVNEEVDVSLRELEF-LGLINSSTTEVSRVHLGALFLGRGKFFS--VKEKDLF 175 (211)
T ss_dssp CBSSEECCCBGGGCSSHHHHHHHHHHHHHHHHEEEEEEEEEE-EEEEECCSSHHHHTEEEEEEEEEEEEEE--ESCTTTC
T ss_pred cccccceEEeCCCCCCchhhHHHHHHHHHHHHhCCeeeccEE-EEEEeccCCCCCeEEEEEEEEEEeCCce--eCCCCeE
Confidence 777 9999999998 4 999999999999999988877 8887653221122344567777755322 2345677
Q ss_pred eeEEEeHHHHHHhc
Q 033333 74 SRKWMSVAEARKVC 87 (121)
Q Consensus 74 ~~~W~~~~~l~~~~ 87 (121)
+++|++++++.++.
T Consensus 176 ~~~W~~~~eL~~~~ 189 (211)
T 3e57_A 176 EWELIKLEELEKFS 189 (211)
T ss_dssp EEEEEEHHHHHHHG
T ss_pred EEEEEEHHHHHHhH
Confidence 89999999999984
No 53
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.74 E-value=2.7e-18 Score=114.07 Aligned_cols=83 Identities=34% Similarity=0.599 Sum_probs=60.6
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEeccccccccc--CCcceeEEE
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPE--KNVRSRKWM 78 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~--~e~~~~~W~ 78 (121)
|.||||++++||++++||+||++||||+.+..... ++.+.+. .. . ...++|.+........... .+..+++|+
T Consensus 68 W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~-l~~~~~~--~~-~-~~~~~f~~~~~~~~~~~~~~~e~~~~~~W~ 142 (194)
T 2fvv_A 68 WIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRL-VGIFENQ--ER-K-HRTYVYVLIVTEVLEDWEDSVNIGRKREWF 142 (194)
T ss_dssp EECSEEECCTTCCHHHHHHHHHHHHHCEEEEEEEE-EEEEEET--TT-T-EEEEEEEEEEEEECSSCHHHHHHCCCEEEE
T ss_pred EECCCCcCCCCcCHHHHHHHHHHHHhCCccccceE-EEEEEcC--CC-c-eEEEEEEEEEccccCCCCCcccccceEEEE
Confidence 89999999999999999999999999999988777 8877642 12 1 2345666654432211111 123578999
Q ss_pred eHHHHHHhcC
Q 033333 79 SVAEARKVCQ 88 (121)
Q Consensus 79 ~~~~l~~~~~ 88 (121)
+++++.+++.
T Consensus 143 ~~~el~~~l~ 152 (194)
T 2fvv_A 143 KIEDAIKVLQ 152 (194)
T ss_dssp EHHHHHHHHT
T ss_pred EHHHHHHHHh
Confidence 9999998754
No 54
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.74 E-value=1.4e-18 Score=113.83 Aligned_cols=87 Identities=18% Similarity=0.092 Sum_probs=63.5
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEecc--cccccccCCcceeEEE
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQD--QLAEWPEKNVRSRKWM 78 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~--~~~~~~~~e~~~~~W~ 78 (121)
|.||||++++||++++||+||++||||+.+..... ++.+.+. ........++|.+.... .......+|..+++|+
T Consensus 70 w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-l~~~~~~--~~~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~ 146 (182)
T 2yvp_A 70 LEVPAGKVDEGETPEAAARRELREEVGAEAETLIP-LPSFHPQ--PSFTAVVFHPFLALKARVVTPPTLEEGELLESLEL 146 (182)
T ss_dssp EECCEEECCTTCCHHHHHHHHHHHHHCEECSCEEE-CCCBCSC--TTTBCCEEEEEEECSCEECSCCCCCTTCCEEEEEE
T ss_pred EEeccccCCCCcCHHHHHHHHHHHHhCCCcccEEE-EEEEeCC--CCccccEEEEEEEeccccCCCCCCCCCceEEEEEE
Confidence 89999999999999999999999999999877666 6665321 12223455677765332 1222234677889999
Q ss_pred eHHHHHHhcCch
Q 033333 79 SVAEARKVCQHW 90 (121)
Q Consensus 79 ~~~~l~~~~~~~ 90 (121)
+++++.+++.++
T Consensus 147 ~~~el~~~~~~~ 158 (182)
T 2yvp_A 147 PLTEVYALLAKG 158 (182)
T ss_dssp EHHHHHHHHHTT
T ss_pred EHHHHHHHHHcC
Confidence 999999986544
No 55
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.74 E-value=3.4e-18 Score=121.51 Aligned_cols=101 Identities=16% Similarity=0.134 Sum_probs=66.8
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceee----eeEeeeCCC--CCeeEEEEEEeEeccccc-c-cccCCc
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLG----EWNFKSRAH--NTDYQGYMFPLLVQDQLA-E-WPEKNV 72 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~----~~~~~~~~~--~~~~~~~~f~~~~~~~~~-~-~~~~e~ 72 (121)
|.||||++++||++++||+||++||||+.+..... ++ ...+..+.. ..+...++|.+....... . ...+|.
T Consensus 230 w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~e~ 308 (341)
T 2qjo_A 230 IALPGGFIKQNETLVEGMLRELKEETRLKVPLPVL-RGSIVDSHVFDAPGRSLRGRTITHAYFIQLPGGELPAVKGGDDA 308 (341)
T ss_dssp EECSEEECCTTSCHHHHHHHHHHHHHCCSSCHHHH-HHTEEEEEEECCTTSCTTSCEEEEEEEEECCSSSCCCCC-----
T ss_pred EECCCCcCCCCCCHHHHHHHHHhhhhCCccccccc-cccccceEEEeCCCCCCCCcEEEEEEEEEecCCCcCccCCCCce
Confidence 89999999999999999999999999999876554 43 122322221 223445677776544332 1 233677
Q ss_pred ceeEEEeHHHHHHh--cCchhHHHHHHHHHHH
Q 033333 73 RSRKWMSVAEARKV--CQHWWMKEALDRLVMR 102 (121)
Q Consensus 73 ~~~~W~~~~~l~~~--~~~~~~~~~~~~~~~~ 102 (121)
.+++|++++++.++ ...+..+.++..+...
T Consensus 309 ~~~~W~~~~el~~~~~~~~~~~~~il~~~~~~ 340 (341)
T 2qjo_A 309 QKAWWMSLADLYAQEEQIYEDHFQIIQHFVSK 340 (341)
T ss_dssp -CEEEEEHHHHHHTGGGBCTTHHHHHHHHC--
T ss_pred eeEEEeeHHHHhhhhhhhchHHHHHHHHHHhc
Confidence 88999999999997 5667777777766543
No 56
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.73 E-value=9.1e-19 Score=108.32 Aligned_cols=94 Identities=18% Similarity=0.182 Sum_probs=69.9
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEecccccccccCCcceeEEEeH
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSV 80 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~ 80 (121)
|.||||++++||++.+||+||++||||+.+..... ++.+.+..+ +.....++|.+...... ...+|..+++|+++
T Consensus 33 w~~PgG~~e~gE~~~~aa~RE~~EE~G~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~e~~~~~W~~~ 107 (129)
T 1mut_A 33 LEFPGGKIEMGETPEQAVVRELQEEVGITPQHFSL-FEKLEYEFP--DRHITLWFWLVERWEGE--PWGKEGQPGEWMSL 107 (129)
T ss_dssp EECCCCCSSSCSSTTHHHHHHHHTTTCCSSCEECC-CCCCBCCCS--SCEEECCCEEEEECSSC--CCCCSSCCCEEEES
T ss_pred EECCccCcCCCCCHHHHHHHHHHHHhCCccccceE-EEEEEEecC--CceEEEEEEEEEccCCc--cCCcccceeEEeCH
Confidence 89999999999999999999999999999887776 776654333 22333456776654432 12356677899999
Q ss_pred HHHHHhcCchhHHHHHHHH
Q 033333 81 AEARKVCQHWWMKEALDRL 99 (121)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~ 99 (121)
+++.++...+.++.++..+
T Consensus 108 ~el~~~~~~~~~~~~l~~l 126 (129)
T 1mut_A 108 VGLNADDFPPANEPVIAKL 126 (129)
T ss_dssp SSCCTTTSCTTCHHHHHHH
T ss_pred HHcccccCCchhHHHHHHH
Confidence 9999887777666666553
No 57
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.73 E-value=4.4e-18 Score=114.20 Aligned_cols=88 Identities=20% Similarity=0.089 Sum_probs=63.2
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEecccc--c---ccccCCccee
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQL--A---EWPEKNVRSR 75 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~--~---~~~~~e~~~~ 75 (121)
|.||||++|+||++++||+||++||||+.+..... ++.+ +.++ +......++|++...... . ....+|..++
T Consensus 92 welPgG~ve~gE~~~~aA~REl~EEtGl~~~~~~~-l~~~-~~~~-g~~~~~~~~f~a~~~~~~~~~~~~~~~e~E~~~~ 168 (209)
T 1g0s_A 92 LEMVAGMIEEGESVEDVARREAIEEAGLIVKRTKP-VLSF-LASP-GGTSERSSIMVGEVDATTASGIHGLADENEDIRV 168 (209)
T ss_dssp EECEEEECCTTCCHHHHHHHHHHHHHCCCCCCEEE-EEEE-ESCT-TTBCCEEEEEEEECCGGGCC--------CCSCEE
T ss_pred EEeCcccCCCCcCHHHHHHHHHHHHcCcccCcEEE-eEEE-ecCC-CccCcEEEEEEEEEccccccCCCCCCCCCcEEEE
Confidence 78999999999999999999999999999877666 7765 3323 222345577777753321 1 1223567789
Q ss_pred EEEeHHHHHHhcCchh
Q 033333 76 KWMSVAEARKVCQHWW 91 (121)
Q Consensus 76 ~W~~~~~l~~~~~~~~ 91 (121)
+|++++++.+++.++.
T Consensus 169 ~w~~~~el~~~i~~g~ 184 (209)
T 1g0s_A 169 HVVSREQAYQWVEEGK 184 (209)
T ss_dssp EEEEHHHHHHHHHTTS
T ss_pred EEEEHHHHHHHHHcCC
Confidence 9999999999865543
No 58
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.73 E-value=3e-18 Score=113.47 Aligned_cols=89 Identities=15% Similarity=-0.015 Sum_probs=63.3
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEeccccc----ccccCCcceeE
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLA----EWPEKNVRSRK 76 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~----~~~~~e~~~~~ 76 (121)
|.||||+++ ||++++||+||++||||+.+..... ++.+. ... +......++|.+....... ....+|..+++
T Consensus 81 w~lPgG~ve-gE~~~~aa~REl~EEtG~~~~~~~~-l~~~~-~~~-~~~~~~~~~f~~~~~~~~~~~~~~~~~~E~~~~~ 156 (191)
T 3o6z_A 81 IESCAGLLD-NDEPEVCIRKEAIEETGYEVGEVRK-LFELY-MSP-GGVTELIHFFIAEYSDNQRANAGGGVEDEAIEVL 156 (191)
T ss_dssp EECEEEECC-SSCHHHHHHHHHHHHC-CCCSCEEE-EEEEE-SCT-TTBCCEEEEEEEECCTTCC--------CCSSEEE
T ss_pred EEecceEeC-CCCHHHHHHHHHHHHhCCccCcEEE-EEEEE-eCC-CccCcEEEEEEEEEcccccccCCCCCCCcEEEEE
Confidence 889999999 9999999999999999999877666 77642 222 2233456778777654211 11256788899
Q ss_pred EEeHHHHHHhcCchhHH
Q 033333 77 WMSVAEARKVCQHWWMK 93 (121)
Q Consensus 77 W~~~~~l~~~~~~~~~~ 93 (121)
|++++++.+++.++.+.
T Consensus 157 w~~~~el~~~~~~g~i~ 173 (191)
T 3o6z_A 157 ELPFSQALEMIKTGEIR 173 (191)
T ss_dssp EEEHHHHHHHHHHSSCC
T ss_pred EEEHHHHHHHHHcCCCC
Confidence 99999999987655443
No 59
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.73 E-value=5.3e-18 Score=114.58 Aligned_cols=90 Identities=17% Similarity=0.037 Sum_probs=62.5
Q ss_pred CccCCcccCC-CCCHHHHHHHHHHHHhCcee--eeecceeeeeEeeeCCCCCeeEEEEEEeEecccc------cccccCC
Q 033333 1 MLFPKGGWEI-DESIQEAALRETIEEAGVTG--IVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQL------AEWPEKN 71 (121)
Q Consensus 1 W~lPgG~ve~-gE~~~eaa~REl~EEtG~~~--~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~------~~~~~~e 71 (121)
|.||||++|+ ||++++||+||++||||+.+ ..... ++.+.. ..+......++|.+...... .....+|
T Consensus 97 welPgG~ve~~gEs~~eaA~REl~EEtGl~~~~~~l~~-l~~~~~--~~g~~~~~~~~f~a~~~~~~~~~~~~~~~d~~E 173 (218)
T 3q91_A 97 VELCAGLVDQPGLSLEEVACKEAWEECGYHLAPSDLRR-VATYWS--GVGLTGSRQTMFYTEVTDAQRSGPGGGLVEEGE 173 (218)
T ss_dssp EECEEEECCSSSCCHHHHHHHHHHHHHCBCCCGGGCEE-EEEEEE--C---CCEEEEEEEEEECGGGBCC---------C
T ss_pred EECCcceeCCCCCCHHHHHHHHHHHHhCCccccCceEE-EEEEec--CCCccceEEEEEEEEECCcccccCCCCCCCCCc
Confidence 7899999999 99999999999999999998 44444 565432 22222345677877765321 1122367
Q ss_pred cceeEEEeHHHHHHhcCchhHH
Q 033333 72 VRSRKWMSVAEARKVCQHWWMK 93 (121)
Q Consensus 72 ~~~~~W~~~~~l~~~~~~~~~~ 93 (121)
..++.|++++++.+++..+.+.
T Consensus 174 ~~ev~wv~l~el~~~i~~g~i~ 195 (218)
T 3q91_A 174 LIEVVHLPLEGAQAFADDPDIP 195 (218)
T ss_dssp CEEEEEEEGGGHHHHHHCTTSC
T ss_pred EEEEEEEEHHHHHHHHHcCCCC
Confidence 8889999999999987655443
No 60
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.72 E-value=1.9e-17 Score=107.19 Aligned_cols=86 Identities=22% Similarity=0.219 Sum_probs=60.8
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeE----eeeCCCC---------CeeEEEEEEeEeccccc-c
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWN----FKSRAHN---------TDYQGYMFPLLVQDQLA-E 66 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~----~~~~~~~---------~~~~~~~f~~~~~~~~~-~ 66 (121)
|.+|||++++||++.+||+||++||||+.+..... ++.+. |..+... .....++|.+....... .
T Consensus 33 w~~p~G~~e~gE~~~~aa~RE~~EE~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 111 (164)
T 2kdv_A 33 WQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRI-LASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEI 111 (164)
T ss_dssp EECCEEECCTTCCHHHHHHHHHHHHHCCCGGGEEE-EEECSSCEEEECCTTTCCTTSSSCCCEEEEEEEEEEESSCGGGC
T ss_pred EECCeeecCCCCCHHHHHHHHHHHHHCCCccceEE-EEEecceeEEecCcceeeeccCcccccceeEEEEEEecCCcccc
Confidence 89999999999999999999999999999876665 66542 2222110 12245778877654321 1
Q ss_pred c----ccCCcceeEEEeHHHHHHhc
Q 033333 67 W----PEKNVRSRKWMSVAEARKVC 87 (121)
Q Consensus 67 ~----~~~e~~~~~W~~~~~l~~~~ 87 (121)
. +..|..+++|++++++.+.+
T Consensus 112 ~l~~~~~~E~~~~~W~~~~e~~~~l 136 (164)
T 2kdv_A 112 NMQTSSTPEFDGWRWVSYWYPVRQV 136 (164)
T ss_dssp CSCSSSSCSEEEEEEEETTTGGGGS
T ss_pred ccCCCCCchhceEEEecHHHhhhhh
Confidence 1 23477789999999986653
No 61
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.72 E-value=8.4e-18 Score=112.57 Aligned_cols=87 Identities=18% Similarity=0.110 Sum_probs=60.3
Q ss_pred CccCCcccC-CCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEeccccccc---ccCCcceeE
Q 033333 1 MLFPKGGWE-IDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEW---PEKNVRSRK 76 (121)
Q Consensus 1 W~lPgG~ve-~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~---~~~e~~~~~ 76 (121)
|.||||+++ +||++++||+||++||||+.+..... ++.+ +..+ +......++|.+......... ...|..+++
T Consensus 72 w~lPgG~ve~~gEs~~~aa~REl~EEtGl~~~~~~~-l~~~-~~~~-~~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~ 148 (207)
T 1mk1_A 72 WELPAGLLDVAGEPPHLTAARELREEVGLQASTWQV-LVDL-DTAP-GFSDESVRVYLATGLREVGRPEAHHEEADMTMG 148 (207)
T ss_dssp EECCEEECCSTTCCHHHHHHHHHHHHHCEEEEEEEE-EEEE-CSCT-TTBCCCEEEEEEEEEEECCC----------CEE
T ss_pred EEeCCccccCCCCCHHHHHHHHHHHHHCCcccccEE-EEEE-EcCC-CccccEEEEEEEEccccCCCCCCCCCCceEEEE
Confidence 899999999 99999999999999999999988776 7665 3322 222224566776644332221 235677899
Q ss_pred EEeHHHHHHhcCch
Q 033333 77 WMSVAEARKVCQHW 90 (121)
Q Consensus 77 W~~~~~l~~~~~~~ 90 (121)
|++++++.+++..+
T Consensus 149 Wv~~~el~~~~~~~ 162 (207)
T 1mk1_A 149 WYPIAEAARRVLRG 162 (207)
T ss_dssp EEEHHHHHHHHHTT
T ss_pred EEEHHHHHHHHHcC
Confidence 99999999986544
No 62
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.72 E-value=2.1e-17 Score=110.99 Aligned_cols=85 Identities=15% Similarity=0.073 Sum_probs=61.5
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEecccc------ccc-ccCCcc
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQL------AEW-PEKNVR 73 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~------~~~-~~~e~~ 73 (121)
|.||||++++||++++||+||++||||+.+..... ++.+ +..+ +......++|++.+.... ... ..+|..
T Consensus 94 welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~-l~~~-~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~E~~ 170 (212)
T 2dsc_A 94 IEFPAGLIDDGETPEAAALRELEEETGYKGDIAEC-SPAV-CMDP-GLSNCTIHIVTVTINGDDAENARPKPKPGDGEFV 170 (212)
T ss_dssp EECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEEE-CCCE-ESCT-TTBCCEEEEEEEEEETTSGGGSSCCCCCCTTCCC
T ss_pred EECCccccCCCCCHHHHHHHHHHHHhCCCccceEE-eccE-EcCC-CccCceEEEEEEEEeCccccccCCCCCCCCCceE
Confidence 89999999999999999999999999999887766 6654 2222 212234456666543211 112 236788
Q ss_pred eeEEEeHHHHHHhcC
Q 033333 74 SRKWMSVAEARKVCQ 88 (121)
Q Consensus 74 ~~~W~~~~~l~~~~~ 88 (121)
+++|++++++.+++.
T Consensus 171 ~~~w~~~~el~~~~~ 185 (212)
T 2dsc_A 171 EVISLPKNDLLQRLD 185 (212)
T ss_dssp EEEEEEGGGHHHHHH
T ss_pred EEEEEEHHHHHHHHH
Confidence 899999999998865
No 63
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.71 E-value=1.1e-17 Score=110.69 Aligned_cols=84 Identities=20% Similarity=0.131 Sum_probs=63.7
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEecccc--cccccCCcceeEEE
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQL--AEWPEKNVRSRKWM 78 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~--~~~~~~e~~~~~W~ 78 (121)
|.||||++++||++++||+||++||||+.+..... ++.+.+..... ...+++|.+...... .....+|..+++|+
T Consensus 66 w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-l~~~~~~~~~~--~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~ 142 (194)
T 1nqz_A 66 IAFPGGSLDAGETPTQAALREAQEEVALDPAAVTL-LGELDDVFTPV--GFHVTPVLGRIAPEALDTLRVTPEVAQIITP 142 (194)
T ss_dssp EECSEEECCTTCCHHHHHHHHHHHHHCCCGGGCEE-EEECCCEEETT--TEEEEEEEEEECGGGGGGCCCCTTEEEEECC
T ss_pred EECCcccCCCCCCHHHHHHHHHHHHHCCCccceEE-EEEccCccCCC--CeEEEEEEEEecCCccccCCCccceeEEEEE
Confidence 89999999999999999999999999999887666 77765443322 235567777765332 22334677889999
Q ss_pred eHHHH-HHhc
Q 033333 79 SVAEA-RKVC 87 (121)
Q Consensus 79 ~~~~l-~~~~ 87 (121)
+++++ .+..
T Consensus 143 ~~~el~~~~~ 152 (194)
T 1nqz_A 143 TLAELRAVPL 152 (194)
T ss_dssp BHHHHHHSCC
T ss_pred EHHHhccCCC
Confidence 99999 7653
No 64
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.71 E-value=1.1e-17 Score=116.35 Aligned_cols=105 Identities=16% Similarity=0.181 Sum_probs=71.7
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeee--ecceeeeeEeeeCCCCCeeEEEEEEeEecccccccccCCcceeEEE
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIV--ECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWM 78 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~--~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~ 78 (121)
|.||||++++||++++||+||++||||+.+.. ... ++.+.........+.+.++|.+.+.... ..+.+|..+++|+
T Consensus 72 W~lPGG~ve~gEs~~~AA~REl~EEtGl~v~~~~l~~-l~~~~~~~r~~~~~~~~~~y~a~~~~~~-~~~~~E~~~~~W~ 149 (273)
T 2fml_A 72 WALPGGFVNRNESTEDSVLRETKEETGVVISQENIEQ-LHSFSRPDRDPRGWVVTVSYLAFIGEEP-LIAGDDAKEVHWF 149 (273)
T ss_dssp EECCEEECCTTSCHHHHHHHHHHHHHCCCCCGGGEEE-EEEECCTTSSTTSSEEEEEEEEECCCCC-CCCCTTEEEEEEE
T ss_pred EECCccCCCCCcCHHHHHHHHHHHHHCCCCCcCcEEE-EEEEcCCCCCCCceEEEEEEEEEeCCCC-CCCCcceeeEEEE
Confidence 89999999999999999999999999987553 333 4544333222223456677777765543 3344677889999
Q ss_pred eHHHHHHhc-----------------------CchhHHHHHHHHHHHhcccc
Q 033333 79 SVAEARKVC-----------------------QHWWMKEALDRLVMRLTSQQ 107 (121)
Q Consensus 79 ~~~~l~~~~-----------------------~~~~~~~~~~~~~~~~~~~~ 107 (121)
+++++...+ ..-+...++..++++++.+.
T Consensus 150 ~~~e~~~~~~~~~e~~~l~~~~~~~~~~~~~~LafdH~~Il~~al~rlr~kl 201 (273)
T 2fml_A 150 NLERHGQHITLSHEDVEITLDLKTAASLGKDTLAFDHSEIIIKAFNRVVDKM 201 (273)
T ss_dssp EEEEETTEEEEEETTEEEEEETTTCCBCSSSCCSTTHHHHHHHHHHHHHHHT
T ss_pred EhhHhhhhhccccchhhhccccccccccCCCcccccHHHHHHHHHHHHHHHh
Confidence 999754432 12234567777777766554
No 65
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.68 E-value=1e-16 Score=102.47 Aligned_cols=96 Identities=21% Similarity=0.228 Sum_probs=69.6
Q ss_pred CccCCcccCCCCCHH-HHHHHHHHHHhC-ceeeeecceeeeeEeeeCCCCCeeEEEEEEeEecccccccccCCcceeEEE
Q 033333 1 MLFPKGGWEIDESIQ-EAALRETIEEAG-VTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWM 78 (121)
Q Consensus 1 W~lPgG~ve~gE~~~-eaa~REl~EEtG-~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~ 78 (121)
|.||||++++||+++ +||+||++|||| +.+..... ++.+.+... +.....++|.+....... ...+..+++|+
T Consensus 51 w~~PgG~~e~gE~~~~~a~~REl~EE~g~l~~~~~~~-l~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~e~~~~~W~ 125 (155)
T 1x51_A 51 WEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRH-LGEVVHTFS--HIKLTYQVYGLALEGQTP--VTTVPPGARWL 125 (155)
T ss_dssp EECCEEECCSSHHHHHHHHHHHHHHHSCCCCSTTCEE-CCCBCCBCS--SCEEEEEEEEEECSSCCC--CCCCCTTEEEE
T ss_pred ecCCccccCCCCCHHHHHHHHHHHHHhCCcceeeeee-cceEEEecC--CccEEEEEEEEEEcCCCC--CCCCCCccEEc
Confidence 899999999999996 999999999999 87655454 665544332 223345677776553321 12355678999
Q ss_pred eHHHHHHhcCchhHHHHHHHHHH
Q 033333 79 SVAEARKVCQHWWMKEALDRLVM 101 (121)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~~~~~~ 101 (121)
+++++.++.....++.++..+..
T Consensus 126 ~~~el~~~~~~~~~~~~l~~~~~ 148 (155)
T 1x51_A 126 TQEEFHTAAVSTAMKKVFRVYQG 148 (155)
T ss_dssp EHHHHHHSCCCHHHHHHHHHHHH
T ss_pred cHHHhhhcCCCHHHHHHHHHHHh
Confidence 99999998777777777776654
No 66
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.64 E-value=1.5e-16 Score=110.53 Aligned_cols=85 Identities=20% Similarity=0.235 Sum_probs=55.0
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEecccc-c-c-cccCCcceeEE
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQL-A-E-WPEKNVRSRKW 77 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~-~-~-~~~~e~~~~~W 77 (121)
|.+|||++++||++++||+||++||||+.+..... +..+. ...... ...++|.+...... . . ...+|..+++|
T Consensus 128 W~lPgG~ve~gEs~~eAA~REl~EEtGl~~~~l~~-~~~~~--~~~~~~-~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W 203 (271)
T 2a6t_A 128 WGFPKGKIDKDESDVDCAIREVYEETGFDCSSRIN-PNEFI--DMTIRG-QNVRLYIIPGISLDTRFESRTRKEISKIEW 203 (271)
T ss_dssp CBCSEEECCTTCCHHHHHHHHHHHHHCCCCTTTCC-TTCEE--EEEETT-EEEEEEEECCCCTTCCCC------EEEEEE
T ss_pred EECCcccCCCCcCHHHHHHHHHHHHhCCCceeeee-eeeec--cCCcCC-ceEEEEEEEEecCcccCCCCCccceeEEEE
Confidence 99999999999999999999999999999876433 33222 211111 23455665543321 1 1 13367788999
Q ss_pred EeHHHHHHhcCc
Q 033333 78 MSVAEARKVCQH 89 (121)
Q Consensus 78 ~~~~~l~~~~~~ 89 (121)
++++++.++...
T Consensus 204 ~~~~el~~~~~~ 215 (271)
T 2a6t_A 204 HNLMDLPTFKKN 215 (271)
T ss_dssp EEGGGSTTCC--
T ss_pred EEHHHHHHHHhc
Confidence 999999886443
No 67
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.64 E-value=3.6e-16 Score=109.73 Aligned_cols=104 Identities=13% Similarity=-0.004 Sum_probs=68.1
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCcee------------eeeccee---ee--eEeeeCCC----CCeeEEEEEEeE
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTG------------IVECELL---GE--WNFKSRAH----NTDYQGYMFPLL 59 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~------------~~~~~~l---~~--~~~~~~~~----~~~~~~~~f~~~ 59 (121)
|.||||+|++||++.+||+||++||||+.+ ....+ + +. |....... .......+|.+.
T Consensus 152 W~lPGG~Ve~GEs~~eAA~REl~EETGl~~~~~~~~~~~l~~~l~~l-~~~~g~~vy~~~~~dpr~~d~~~~~~~~f~~~ 230 (292)
T 1q33_A 152 WAIPGGMVDPGEKISATLKREFGEEALNSLQKTSAEKREIEEKLHKL-FSQDHLVIYKGYVDDPRNTDNAWMETEAVNYH 230 (292)
T ss_dssp EECCCEECCTTCCHHHHHHHHHHHHHSCGGGSCSSHHHHHHHHHHHH-TTTSEEEEEEEECCCTTCCSSEEEEEEEEEEE
T ss_pred EeCCCcccCCCCCHHHHHHHHHHHHhCCccccccccchhhHHHHHHH-hhcccceeecccccCCCCCcccEEEEEEEEEE
Confidence 899999999999999999999999999983 12222 2 22 22111111 113345566655
Q ss_pred ecccc-----cccccCCcceeEEEeHHHHHHhcCchhHHHHHHHHHHHhcccc
Q 033333 60 VQDQL-----AEWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLTSQQ 107 (121)
Q Consensus 60 ~~~~~-----~~~~~~e~~~~~W~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 107 (121)
..... ...+.+|..+++|++++++..+ ....+.++..+.+++....
T Consensus 231 ~~~g~~~~~~~~~~~~E~~~~~W~~~del~~L--~~~h~~il~~~~~~~~a~~ 281 (292)
T 1q33_A 231 DETGEIMDNLMLEAGDDAGKVKWVDINDKLKL--YASHSQFIKLVAEKRDAHW 281 (292)
T ss_dssp ESSSTTTTTCCCCCCTTCSEEEEEECCTTCCC--STTHHHHHHHHHHHHTCCC
T ss_pred eCCCccccccccCCCCccceEEEEEcccCccc--CHhHHHHHHHHHHHhcCcc
Confidence 43221 1223467888999999999865 4566788888887765433
No 68
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.63 E-value=9.7e-17 Score=107.86 Aligned_cols=82 Identities=16% Similarity=0.025 Sum_probs=58.1
Q ss_pred CccCCcccCCCC-CHHHHHHHHHHHHhCceeeeecc----eeeeeEeeeCCCCCeeEEEEEEeEecccccc---------
Q 033333 1 MLFPKGGWEIDE-SIQEAALRETIEEAGVTGIVECE----LLGEWNFKSRAHNTDYQGYMFPLLVQDQLAE--------- 66 (121)
Q Consensus 1 W~lPgG~ve~gE-~~~eaa~REl~EEtG~~~~~~~~----~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~--------- 66 (121)
|.||||++++|| ++++||+||++||||+.+....+ .++.+.+..+ .....++|.+........
T Consensus 68 w~~PGG~ve~gE~t~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~~~~---~~~~~~~f~~~~~~~~~~~~e~~~~~~ 144 (212)
T 1u20_A 68 LGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYRSSQVREHP---QKCVTHFYIKELKLEEIERIEAEAVNA 144 (212)
T ss_dssp EECSEEEECTTTSCHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEEECTT---SCEEEEEEEEECCHHHHHHHHHHHTTS
T ss_pred EECCCcccCCCCCCHHHHHHHHHHHHHCCCccccceeeeeEEEeccccCC---CcEEEEEEEEEecCCCccccccccccc
Confidence 899999999999 99999999999999999875431 1444433322 334567787776532211
Q ss_pred -cccCCcceeEEEeHHHHHH
Q 033333 67 -WPEKNVRSRKWMSVAEARK 85 (121)
Q Consensus 67 -~~~~e~~~~~W~~~~~l~~ 85 (121)
....+..++.|++++++.+
T Consensus 145 ~~~~~Ev~~~~wvpl~el~~ 164 (212)
T 1u20_A 145 KDHGLEVMGLIRVPLYTLRD 164 (212)
T ss_dssp TTBTTTEEEEEECCCSBCTT
T ss_pred ccCCcceEEEEEEEHHHhhh
Confidence 1224667799999999865
No 69
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.58 E-value=4.4e-15 Score=107.16 Aligned_cols=96 Identities=9% Similarity=-0.044 Sum_probs=76.1
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhCceeeeecceeeeeEeeeCCCCCeeEEEEEEeEecccccccccCCcceeEEEeH
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSV 80 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~ 80 (121)
|.||||++++| ++++|+.||++||||+.+..... ++.+.+...+ .....++|.+..... ..+..+++|+++
T Consensus 269 WefPGG~ve~g-t~~~al~REl~EE~Gl~v~~~~~-l~~~~h~~~h--~~~~~~~~~~~~~~~-----~~e~~~~~Wv~~ 339 (369)
T 3fsp_A 269 WEFPSCETDGA-DGKEKLEQMVGEQYGLQVELTEP-IVSFEHAFSH--LVWQLTVFPGRLVHG-----GPVEEPYRLAPE 339 (369)
T ss_dssp EECCEEECSSS-CTHHHHHHHHTTSSSCCEEECCC-CCEEEEECSS--EEEEEEEEEEEECCS-----SCCCTTEEEEEG
T ss_pred ccCCCcccCCC-CcHHHHHHHHHHHhCCceeeecc-cccEEEEcce--EEEEEEEEEEEEcCC-----CCCccccEEeeH
Confidence 89999999999 99999999999999999988887 8877665543 334556777765442 235677999999
Q ss_pred HHHHHhcCchhHHHHHHHHHHHhcc
Q 033333 81 AEARKVCQHWWMKEALDRLVMRLTS 105 (121)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~ 105 (121)
+++..+...+.++.++..+.+.+..
T Consensus 340 ~el~~~~l~~~~~~il~~l~~~~~~ 364 (369)
T 3fsp_A 340 DELKAYAFPVSHQRVWREYKEWASG 364 (369)
T ss_dssp GGGGGSCCCHHHHHHHHHHHHHTC-
T ss_pred HHhhhCCCCHHHHHHHHHHHHHhcC
Confidence 9999987778888888887776543
No 70
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.58 E-value=1.2e-15 Score=103.02 Aligned_cols=82 Identities=13% Similarity=0.055 Sum_probs=56.1
Q ss_pred CccCCcccCCCC-CHHHHHHHHHHHHhCceeee--ecceeeeeEeeeCCCCCeeEEEEEEeEeccccc----------cc
Q 033333 1 MLFPKGGWEIDE-SIQEAALRETIEEAGVTGIV--ECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLA----------EW 67 (121)
Q Consensus 1 W~lPgG~ve~gE-~~~eaa~REl~EEtG~~~~~--~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~----------~~ 67 (121)
|.||||++++|| ++++||+||++||||+.+.. ... +..+... .........++|.+.+..... ..
T Consensus 77 w~lPGG~ve~gE~t~~eaa~REl~EEtGl~~~~~~l~~-l~~~~~~-~~~~~~~~~~~f~~~l~~~~~~~~e~~~~~~~~ 154 (217)
T 2xsq_A 77 LGFPGGFVDTQDRSLEDGLNRELREELGEAAAAFRVER-TDYRSSH-VGSGPRVVAHFYAKRLTLEELLAVEAGATRAKD 154 (217)
T ss_dssp EECSEEECCTTCSSHHHHHHHHHHHHHCGGGGGCCCCG-GGEEEEE-ECSSSSEEEEEEEEECCHHHHHHHHHHGGGSTT
T ss_pred EECCceecCCCCCCHHHHHHHHHHHHHCCCCccceeEE-EEEEeec-CCCCCeEEEEEEEEEeccccceecccccccccc
Confidence 899999999999 99999999999999999864 222 3333211 111123456777777654321 11
Q ss_pred ccCCcceeEEEeHHHHH
Q 033333 68 PEKNVRSRKWMSVAEAR 84 (121)
Q Consensus 68 ~~~e~~~~~W~~~~~l~ 84 (121)
...|..++.|++++++.
T Consensus 155 ~~~E~~~v~~vPl~~l~ 171 (217)
T 2xsq_A 155 HGLEVLGLVRVPLYTLR 171 (217)
T ss_dssp BTTTEEEEEECCCSBCT
T ss_pred cCCceeeEEEEEHHHhh
Confidence 12466788999998886
No 71
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.52 E-value=9.5e-14 Score=94.67 Aligned_cols=85 Identities=13% Similarity=0.096 Sum_probs=60.0
Q ss_pred CccC-CcccCCC------CC---HHHHHHHHHHHHhCceeee-----ecceeeeeEeeeCCCCC---eeEEEEEEeEecc
Q 033333 1 MLFP-KGGWEID------ES---IQEAALRETIEEAGVTGIV-----ECELLGEWNFKSRAHNT---DYQGYMFPLLVQD 62 (121)
Q Consensus 1 W~lP-gG~ve~g------E~---~~eaa~REl~EEtG~~~~~-----~~~~l~~~~~~~~~~~~---~~~~~~f~~~~~~ 62 (121)
|.+| ||++++| |+ +.+||+||++||||+.+.. ... ++.+.|.....+. ..+.++|.+....
T Consensus 89 W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElGi~~~~v~~~~l~~-l~~~~y~~~~~~~~~~~e~~~vf~~~~~~ 167 (235)
T 2dho_A 89 FTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIPLEEVPPEEINY-LTRIHYKAQSDGIWGEHEIDYILLVRMNV 167 (235)
T ss_dssp EESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCGGGSCGGGSEE-EEEEEEEEECSSSBEEEEEEEEEEEECCC
T ss_pred EEeccCceecCCCcccccccchhHHHHHHHHHHHHHCCCccccChhhcEE-EEEEEEeccCCCccceeEEEEEEEEEECC
Confidence 7888 5999999 88 5999999999999998652 234 6776665543222 2345677776533
Q ss_pred cccccccCCcceeEEEeHHHHHHhc
Q 033333 63 QLAEWPEKNVRSRKWMSVAEARKVC 87 (121)
Q Consensus 63 ~~~~~~~~e~~~~~W~~~~~l~~~~ 87 (121)
. .....+|..+++|++++++.+++
T Consensus 168 ~-~~~~~~Ev~~~~wv~~~el~~~l 191 (235)
T 2dho_A 168 T-LNPDPNEIKSYCYVSKEELKELL 191 (235)
T ss_dssp C-CCCCTTTEEEEEEECHHHHHHHH
T ss_pred C-CcCChHHEEEEEEEcHHHHHHHH
Confidence 2 22223678889999999998864
No 72
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.51 E-value=9.1e-14 Score=95.35 Aligned_cols=100 Identities=14% Similarity=0.167 Sum_probs=67.1
Q ss_pred CccCC-cccCCC------CCH---HHHHHHHHHHHhCceeee-----ecceeeeeEeeeCCCCC---eeEEEEEEeEecc
Q 033333 1 MLFPK-GGWEID------ESI---QEAALRETIEEAGVTGIV-----ECELLGEWNFKSRAHNT---DYQGYMFPLLVQD 62 (121)
Q Consensus 1 W~lPg-G~ve~g------E~~---~eaa~REl~EEtG~~~~~-----~~~~l~~~~~~~~~~~~---~~~~~~f~~~~~~ 62 (121)
|.+|+ |++++| |++ .+||+||++||||+.+.. ... ++.+.|....... ..+.++|.+....
T Consensus 100 W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElGi~~~~v~~~~l~~-l~~~~y~~~~~~~~~~~e~~~vf~~~~~~ 178 (246)
T 2pny_A 100 FTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPGEQISPEDIVF-MTIYHHKAKSDRIWGEHEICYLLLVRKNV 178 (246)
T ss_dssp BCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCTTTCCGGGSEE-EEEEEEEEESSSSBEEEEEEEEEEEECCC
T ss_pred eEeccCceeccCCcccccccchhHHHHHHHHHHHHHCCCccccCccccEE-EEEEEEEecCCCceeeeEEEEEEEEEECC
Confidence 78885 999999 887 999999999999998652 234 6666655443222 3345667776543
Q ss_pred cccccccCCcceeEEEeHHHHHHhcCc---------hhHHHHHHHHHHH
Q 033333 63 QLAEWPEKNVRSRKWMSVAEARKVCQH---------WWMKEALDRLVMR 102 (121)
Q Consensus 63 ~~~~~~~~e~~~~~W~~~~~l~~~~~~---------~~~~~~~~~~~~~ 102 (121)
. .....+|..+++|++++++.+++.. |+++.++..++..
T Consensus 179 ~-~~~~~~Ev~~~~wv~~eel~~~l~~~~~~~~~ftp~~~~i~~~~l~~ 226 (246)
T 2pny_A 179 T-LNPDPSETKSILYLSQEELWELLEREARGEVKVTPWLRTIAERFLYR 226 (246)
T ss_dssp C-CCCCTTTEEEEEEECHHHHHHHHHHHHHTSSCBCHHHHHHHHHTHHH
T ss_pred C-CCCChHHeeEEEEEeHHHHHHHHHhccCCCceECHhHHHHHHHHHHH
Confidence 2 2222368888999999999886432 4455555554444
No 73
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.48 E-value=1.3e-13 Score=96.82 Aligned_cols=88 Identities=13% Similarity=0.193 Sum_probs=62.8
Q ss_pred ccCCcccCCCCCHHHHHHHHHHHHhCceeeeecc--eeeeeEeeeCCCC--CeeEEEEEEeEeccccccccc-CCcceeE
Q 033333 2 LFPKGGWEIDESIQEAALRETIEEAGVTGIVECE--LLGEWNFKSRAHN--TDYQGYMFPLLVQDQLAEWPE-KNVRSRK 76 (121)
Q Consensus 2 ~lPgG~ve~gE~~~eaa~REl~EEtG~~~~~~~~--~l~~~~~~~~~~~--~~~~~~~f~~~~~~~~~~~~~-~e~~~~~ 76 (121)
.+|+|++++||++.+||+||+.||+|+.+..... .++.+.|...... .....++|.+.++......++ +|..+++
T Consensus 153 ~svaG~i~~GEs~~eaA~REl~EElGI~~~~~~~l~~~g~i~y~~~~~~G~~~E~~~vy~~~l~~~~~p~~~~~EV~~~~ 232 (300)
T 3dup_A 153 NMVAGGQPADLSLRQNLIKECAEEADLPEALARQAIPVGAITYCMESPAGIKPDTLFLYDLALPEDFRPHNTDGEMADFM 232 (300)
T ss_dssp ESEEEECCTTSCHHHHHHHHHHHHHCCCHHHHTTCEEEEEEEEEEEETTEEEEEEEEEEEEECCTTCCCCCTTSSEEEEE
T ss_pred cccccCCCCCCCHHHHHHHHHHHHhCCChhhhhhccccceEEEEEecCCCeEEEEEEEEEEEecCCCcCCCCchHhheEE
Confidence 4789999999999999999999999998754221 1555555433222 233456777776655443344 6888899
Q ss_pred EEeHHHHHHhcCc
Q 033333 77 WMSVAEARKVCQH 89 (121)
Q Consensus 77 W~~~~~l~~~~~~ 89 (121)
|++++++.+++..
T Consensus 233 ~v~~~El~~~l~~ 245 (300)
T 3dup_A 233 LWPAAKVVEAVRT 245 (300)
T ss_dssp EEEHHHHHHHHHH
T ss_pred EECHHHHHHHHhc
Confidence 9999999988665
No 74
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=99.38 E-value=1.5e-12 Score=92.33 Aligned_cols=95 Identities=16% Similarity=0.208 Sum_probs=71.0
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHh-CceeeeecceeeeeEeeeCCCCCeeEEEEEEeEecccccccccCCcceeEEEe
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEA-GVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMS 79 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEt-G~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~ 79 (121)
|.||||.++.++ .++|+||++||| |+.++...+ +++|.... .+ .+..+|.+...+.. ..+++||+
T Consensus 204 W~LPG~~~~~~~--~~~a~RE~~EEttGl~v~~~~L-~~v~~~~~--~~--~~~i~f~~~~~~g~-------~~e~~~f~ 269 (321)
T 3rh7_A 204 LSLPNCTVEGGD--PARTLAAYLEQLTGLNVTIGFL-YSVYEDKS--DG--RQNIVYHALASDGA-------PRQGRFLR 269 (321)
T ss_dssp EBCCEEEESSSC--HHHHHHHHHHHHHSSCEEEEEE-EEEEECTT--TC--CEEEEEEEEECSSC-------CSSSEEEC
T ss_pred ccCCcccCCCCh--hHHHHHHHHHHhcCCEEeeceE-EEEEEcCC--Cc--eEEEEEEEEeCCCC-------eeeeEEEC
Confidence 999988665444 459999999997 999999887 88876432 22 23468888765432 26789999
Q ss_pred HHHHHHh-cCchhHHHHHHHHHHHhcccccC
Q 033333 80 VAEARKV-CQHWWMKEALDRLVMRLTSQQLH 109 (121)
Q Consensus 80 ~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~ 109 (121)
+++++.+ +.++.++.+++..++.-.....+
T Consensus 270 ~~elp~~~~~~~~~~~~L~~y~~e~~~g~f~ 300 (321)
T 3rh7_A 270 PAELAAAKFSSSATADIINRFVLESSIGNFG 300 (321)
T ss_dssp HHHHTTCEESSHHHHHHHHHHHHTTSCSSCC
T ss_pred HHHCCCcccCCHHHHHHHHHHHHHhhcCCCC
Confidence 9999987 56799999998888766655443
No 75
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.35 E-value=2.2e-12 Score=87.72 Aligned_cols=86 Identities=21% Similarity=0.267 Sum_probs=56.7
Q ss_pred CccCCcccCCCCC--------------------HHHHHHHHHHHHhCceeeeecc-------------------------
Q 033333 1 MLFPKGGWEIDES--------------------IQEAALRETIEEAGVTGIVECE------------------------- 35 (121)
Q Consensus 1 W~lPgG~ve~gE~--------------------~~eaa~REl~EEtG~~~~~~~~------------------------- 35 (121)
|+||||+||++|+ +..||+||++||||+.+.....
T Consensus 42 ~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~EE~Gl~l~~~~~~~~~~~~~~~~~~r~~l~~~~~~f~ 121 (232)
T 3qsj_A 42 VAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETAEEIGWLLAVRDGEGTKMDTPLAPDEQADLCKGGDALS 121 (232)
T ss_dssp EECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHHHHSCCCSEECTTCCBCCSCCCHHHHHHHTTCTTHHH
T ss_pred EECCceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHHHHhCceeccccccCcccChhhHHHHHHHHHcCchhHH
Confidence 8899999999987 5899999999999998532110
Q ss_pred -------------eeeeeE-eeeCC-CCCeeEEEEEEeEeccccc-ccccCCcceeEEEeHHHHHHh
Q 033333 36 -------------LLGEWN-FKSRA-HNTDYQGYMFPLLVQDQLA-EWPEKNVRSRKWMSVAEARKV 86 (121)
Q Consensus 36 -------------~l~~~~-~~~~~-~~~~~~~~~f~~~~~~~~~-~~~~~e~~~~~W~~~~~l~~~ 86 (121)
.|..+. ...+. ...++.+.||++.+..... ....+|..+++|++++++.+.
T Consensus 122 ~~~~~~~l~~~~~~L~~~arWiTP~~~~rRfdT~FFla~lpq~~~v~~d~~E~~~~~W~~p~eal~~ 188 (232)
T 3qsj_A 122 AWLSARGLAFDLGLLRRIGRFVTPPTQPVRFDTRFFLCVGQHLGEPRLHGAELDAALWTPARDMLTR 188 (232)
T ss_dssp HHHHTTTCEEBGGGCEEEEEEECCTTSSSEEEEEEEEEECSSCCCCCCCSSSEEEEEEEEHHHHHHH
T ss_pred HHHHHCCCccChhhceeeEEEcCCcCCceeEEEEEEEEECCCCCCCCCCCCceEEEEEEcHHHHHHH
Confidence 011111 11111 1235667888877763221 223478888999999999754
No 76
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=99.19 E-value=3.1e-12 Score=84.10 Aligned_cols=59 Identities=12% Similarity=-0.017 Sum_probs=40.7
Q ss_pred CccCCcccCCCC-CHHHHHHHHHHHHhCc-eeeeecceeeeeEeeeCCCCCeeEEEEEEeEeccc
Q 033333 1 MLFPKGGWEIDE-SIQEAALRETIEEAGV-TGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQ 63 (121)
Q Consensus 1 W~lPgG~ve~gE-~~~eaa~REl~EEtG~-~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~ 63 (121)
|.||||+||+|| |+++|+.||+.||+|+ .+..... +....+.++ .....++|.+.....
T Consensus 56 weFPGGkVe~gE~t~e~aL~REl~EElg~~~V~~~~y-~~s~~~~yp---~~V~LHfY~crl~~G 116 (214)
T 3kvh_A 56 LGFPGGFVDRRFWSLEDGLNRVLGLGLGCLRLTEADY-LSSHLTEGP---HRVVAHLYARQLTLE 116 (214)
T ss_dssp EECSEEEECTTTCCHHHHHHHSCCSCC---CCCGGGE-EEEEEC-------CEEEEEEEEECCHH
T ss_pred EeCCCccCCCCCCCHHHHHHHHHHHhhCCeeeeeeee-EEEEeccCC---CEEEEEEEEEEeeCC
Confidence 899999999999 9999999999999997 4555444 544443333 234557888776543
No 77
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=98.98 E-value=1.4e-09 Score=72.07 Aligned_cols=82 Identities=15% Similarity=0.084 Sum_probs=55.4
Q ss_pred CccCCcccCCCCCHHHHHHHHHHHHhC------ceeeeecceeeeeEeeeCCC-----------CCeeEEEEEEeEeccc
Q 033333 1 MLFPKGGWEIDESIQEAALRETIEEAG------VTGIVECELLGEWNFKSRAH-----------NTDYQGYMFPLLVQDQ 63 (121)
Q Consensus 1 W~lPgG~ve~gE~~~eaa~REl~EEtG------~~~~~~~~~l~~~~~~~~~~-----------~~~~~~~~f~~~~~~~ 63 (121)
|.||||++++||++++|+.||+.||+| ....+... +|.|-.++-.. .......+|++.+...
T Consensus 85 f~LPGGkle~gE~~~eaL~REL~EELg~~~~~~~~~eIge~-lg~wwRp~fet~~YPYlP~Hit~pKE~~kly~V~Lp~~ 163 (208)
T 3bho_A 85 FKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDC-IGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEK 163 (208)
T ss_dssp EECSEEECCTTCCHHHHHHHHHHHHHCCCC-----CEEEEE-EEEEEECSSSSCCBSSCCTTCCSCSEEEEEEEEECCSS
T ss_pred EECCCcccCCCCCHHHHHHHHHHHHhCCCcCCCccEEEhhe-EEEEecCCCCCcCCCCCCcccCchhhheeeeeEecCcc
Confidence 789999999999999999999999999 45566666 77754222111 1144567888877665
Q ss_pred ccccccCCcceeEEEeHHHHH
Q 033333 64 LAEWPEKNVRSRKWMSVAEAR 84 (121)
Q Consensus 64 ~~~~~~~e~~~~~W~~~~~l~ 84 (121)
...... ....+.-+++=++-
T Consensus 164 ~~f~vP-kn~kL~AvPLfely 183 (208)
T 3bho_A 164 ALFAVP-KNYKLVAAPLFELY 183 (208)
T ss_dssp EEEEEE-TTCEEEEEEHHHHT
T ss_pred ceEecC-CCCeEEeecHHhhh
Confidence 432212 34567778866663
No 78
>1vig_A Vigilin; RNA-binding protein, ribonucleoprotein; NMR {Homo sapiens} SCOP: d.51.1.1 PDB: 1vih_A
Probab=47.45 E-value=11 Score=20.06 Aligned_cols=16 Identities=6% Similarity=0.015 Sum_probs=13.4
Q ss_pred HHHHHHHhCceeeeec
Q 033333 19 LRETIEEAGVTGIVEC 34 (121)
Q Consensus 19 ~REl~EEtG~~~~~~~ 34 (121)
+|++.||||+.+.+..
T Consensus 27 I~~I~e~tg~~I~i~~ 42 (71)
T 1vig_A 27 INRIKDQYKVSVRIPP 42 (71)
T ss_dssp HHHHHHHTCCEEECCC
T ss_pred HHHHHHHHCCEEEECC
Confidence 6899999999987644
No 79
>2opv_A KHSRP protein; KH domain, RNA binding protein, KSRP; NMR {Homo sapiens}
Probab=41.74 E-value=18 Score=19.82 Aligned_cols=17 Identities=29% Similarity=0.360 Sum_probs=14.0
Q ss_pred HHHHHHHHhCceeeeec
Q 033333 18 ALRETIEEAGVTGIVEC 34 (121)
Q Consensus 18 a~REl~EEtG~~~~~~~ 34 (121)
-+|++.|+||..+.+..
T Consensus 35 ~Ik~I~~~tga~I~i~~ 51 (85)
T 2opv_A 35 TIKQLQERAGVKMILIQ 51 (85)
T ss_dssp HHHHHHHHHTCEEEECS
T ss_pred HHHHHHHHHCCEEEEcC
Confidence 46999999999987654
No 80
>1x4m_A FAR upstream element binding protein 1; KH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.51.1.1
Probab=38.96 E-value=20 Score=20.05 Aligned_cols=17 Identities=24% Similarity=0.339 Sum_probs=13.9
Q ss_pred HHHHHHHHhCceeeeec
Q 033333 18 ALRETIEEAGVTGIVEC 34 (121)
Q Consensus 18 a~REl~EEtG~~~~~~~ 34 (121)
-+|+++|+||..+.+..
T Consensus 36 ~Ik~I~~~tga~I~I~~ 52 (94)
T 1x4m_A 36 TIKQLQERAGVKMVMIQ 52 (94)
T ss_dssp HHHHHHHHHTSEEEECC
T ss_pred HHHHHHHHHCCeEEecC
Confidence 36899999999987754
No 81
>2axy_A Poly(RC)-binding protein 2; protein-DNA complex, DNA binding protein-DNA complex; 1.70A {Homo sapiens} SCOP: d.51.1.1 PDB: 2pqu_A 2py9_A 1ztg_A 3vke_A*
Probab=38.56 E-value=22 Score=18.83 Aligned_cols=17 Identities=18% Similarity=0.229 Sum_probs=13.8
Q ss_pred HHHHHHHHhCceeeeec
Q 033333 18 ALRETIEEAGVTGIVEC 34 (121)
Q Consensus 18 a~REl~EEtG~~~~~~~ 34 (121)
-+|++.|+||..+.+..
T Consensus 26 ~Ik~I~~~tga~I~i~~ 42 (73)
T 2axy_A 26 SVKKMREESGARINISE 42 (73)
T ss_dssp HHHHHHHHHCCEEEECS
T ss_pred HHHHHHHHHCCEEEEec
Confidence 46899999999887644
No 82
>2ctk_A Vigilin; K homology type I domain, RNA-binding, cell sterol metabolism, beta-alpha-alpha-beta-BETA-alpha structure, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=37.16 E-value=18 Score=20.82 Aligned_cols=17 Identities=24% Similarity=0.294 Sum_probs=13.9
Q ss_pred HHHHHHHHhCceeeeec
Q 033333 18 ALRETIEEAGVTGIVEC 34 (121)
Q Consensus 18 a~REl~EEtG~~~~~~~ 34 (121)
-+|++.||||+.+.+..
T Consensus 38 ~Ir~I~eetg~~I~I~~ 54 (104)
T 2ctk_A 38 GIRKMMDEFEVNIHVPA 54 (104)
T ss_dssp HHHHHHHHTCCEEECCC
T ss_pred HHHHHHHHHCCEEEecC
Confidence 47999999999987643
No 83
>2dgr_A Ring finger and KH domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.32 E-value=22 Score=19.57 Aligned_cols=15 Identities=0% Similarity=0.022 Sum_probs=12.6
Q ss_pred HHHHHHHhCceeeee
Q 033333 19 LRETIEEAGVTGIVE 33 (121)
Q Consensus 19 ~REl~EEtG~~~~~~ 33 (121)
+|++.|+||..+.+.
T Consensus 32 Ik~Iqe~Tga~I~I~ 46 (83)
T 2dgr_A 32 IKRIQQRTHTYIVTP 46 (83)
T ss_dssp HHHHHHHTTCEEECC
T ss_pred HHHHHHHhCCeEEec
Confidence 589999999998764
No 84
>1j5k_A Heterogeneous nuclear ribonucleoprotein K; single-stranded DNA binding protein, transcription factor, hnRNP K, CT element, C-MYC oncogene; NMR {Homo sapiens} SCOP: d.51.1.1 PDB: 1khm_A
Probab=33.91 E-value=27 Score=19.22 Aligned_cols=17 Identities=12% Similarity=0.259 Sum_probs=13.9
Q ss_pred HHHHHHHHhCceeeeec
Q 033333 18 ALRETIEEAGVTGIVEC 34 (121)
Q Consensus 18 a~REl~EEtG~~~~~~~ 34 (121)
-+|+++|+||..+.+..
T Consensus 35 ~Ik~I~~~tga~I~I~~ 51 (89)
T 1j5k_A 35 RIKQIRHESGASIKIDE 51 (89)
T ss_dssp HHHHHHHHTCCEEEECS
T ss_pred hHHHHHHHhCCeEEecC
Confidence 46899999999987744
No 85
>1zzk_A Heterogeneous nuclear ribonucleoprotein K; KH domian, alpha-beta fold, DNA binding protein; 0.95A {Homo sapiens} SCOP: d.51.1.1 PDB: 1zzj_A 1zzi_A
Probab=33.74 E-value=28 Score=18.79 Aligned_cols=17 Identities=12% Similarity=0.259 Sum_probs=13.9
Q ss_pred HHHHHHHHhCceeeeec
Q 033333 18 ALRETIEEAGVTGIVEC 34 (121)
Q Consensus 18 a~REl~EEtG~~~~~~~ 34 (121)
-+|++.|+||..+.+..
T Consensus 28 ~Ik~I~~~tga~I~i~~ 44 (82)
T 1zzk_A 28 RIKQIRHESGASIKIDE 44 (82)
T ss_dssp HHHHHHHHHCCEEEECC
T ss_pred HHHHHHHHHCCEEEEcC
Confidence 47899999999987643
No 86
>2yqr_A KIAA0907 protein; structure genomics, KH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.72 E-value=27 Score=20.79 Aligned_cols=17 Identities=18% Similarity=0.208 Sum_probs=13.9
Q ss_pred HHHHHHHHHhCceeeee
Q 033333 17 AALRETIEEAGVTGIVE 33 (121)
Q Consensus 17 aa~REl~EEtG~~~~~~ 33 (121)
.-+|.+.+|||+++.+.
T Consensus 39 ~tiK~I~~eTG~kI~I~ 55 (119)
T 2yqr_A 39 SYLQHIQIETGAKVFLR 55 (119)
T ss_dssp HHHHHHHHHHCCEEEEE
T ss_pred hHHHHHHHHHCCEEEEe
Confidence 34688999999998774
No 87
>2hh3_A KH-type splicing regulatory protein; KH-RNA binding domain, RNA binding protein; NMR {Homo sapiens}
Probab=32.54 E-value=29 Score=20.00 Aligned_cols=17 Identities=18% Similarity=0.233 Sum_probs=14.1
Q ss_pred HHHHHHHHhCceeeeec
Q 033333 18 ALRETIEEAGVTGIVEC 34 (121)
Q Consensus 18 a~REl~EEtG~~~~~~~ 34 (121)
-+++++|+||+.+.+..
T Consensus 32 ~Ik~I~~~TGakI~I~~ 48 (106)
T 2hh3_A 32 MIKKIQNDAGVRIQFKQ 48 (106)
T ss_dssp HHHHHHHHHTCEEEECS
T ss_pred HHHHHHHHHCcEEEEec
Confidence 46899999999987754
No 88
>1wvn_A Poly(RC)-binding protein 1; KH domain, RNA binding domain, RNA binding protein; 2.10A {Homo sapiens} SCOP: d.51.1.1
Probab=32.52 E-value=31 Score=18.63 Aligned_cols=17 Identities=12% Similarity=0.112 Sum_probs=14.0
Q ss_pred HHHHHHHHhCceeeeec
Q 033333 18 ALRETIEEAGVTGIVEC 34 (121)
Q Consensus 18 a~REl~EEtG~~~~~~~ 34 (121)
-+|++.|+||..+.+..
T Consensus 27 ~Ik~I~~~sga~I~i~~ 43 (82)
T 1wvn_A 27 NINEIRQMSGAQIKIAN 43 (82)
T ss_dssp HHHHHHHHHCCEEEECC
T ss_pred hHHHHHHHhCCEEEEec
Confidence 46899999999987754
No 89
>2p2r_A Poly(RC)-binding protein 2; protein-DNA complex, RNA and DNA binding protein/DNA complex; 1.60A {Homo sapiens}
Probab=32.45 E-value=31 Score=18.25 Aligned_cols=17 Identities=12% Similarity=0.110 Sum_probs=13.8
Q ss_pred HHHHHHHHhCceeeeec
Q 033333 18 ALRETIEEAGVTGIVEC 34 (121)
Q Consensus 18 a~REl~EEtG~~~~~~~ 34 (121)
-+|++.|+||..+.+..
T Consensus 26 ~Ik~I~~~tga~I~i~~ 42 (76)
T 2p2r_A 26 KINEIRQMSGAQIKIAN 42 (76)
T ss_dssp HHHHHHHHHCCEEEECC
T ss_pred HHHHHHHHHCCEEEEcC
Confidence 46899999999987754
No 90
>1we8_A Tudor and KH domain containing protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, RNA binding protein; NMR {Mus musculus} SCOP: d.51.1.1
Probab=32.22 E-value=28 Score=19.86 Aligned_cols=17 Identities=12% Similarity=0.208 Sum_probs=14.2
Q ss_pred HHHHHHHHhCceeeeec
Q 033333 18 ALRETIEEAGVTGIVEC 34 (121)
Q Consensus 18 a~REl~EEtG~~~~~~~ 34 (121)
-+|++.|+||..+.+..
T Consensus 36 ~Ik~I~~~tga~I~I~~ 52 (104)
T 1we8_A 36 TIRSICKASGAKITCDK 52 (104)
T ss_dssp HHHHHHHHHCCEEEECC
T ss_pred HHHHHHHHHCCEEEEec
Confidence 47899999999987754
No 91
>2hh2_A KH-type splicing regulatory protein; KH-RNA binding domain, RNA binding protein; NMR {Homo sapiens}
Probab=31.87 E-value=29 Score=19.97 Aligned_cols=17 Identities=6% Similarity=0.089 Sum_probs=14.0
Q ss_pred HHHHHHHHhCceeeeec
Q 033333 18 ALRETIEEAGVTGIVEC 34 (121)
Q Consensus 18 a~REl~EEtG~~~~~~~ 34 (121)
-+|+++|+||..+.+..
T Consensus 28 ~Ik~I~~~TGa~I~I~~ 44 (107)
T 2hh2_A 28 NVKAINQQTGAFVEISR 44 (107)
T ss_dssp HHHHHHHHSSSEEEECC
T ss_pred HHHHHHHHhCCEEEEcC
Confidence 36899999999987754
No 92
>1k1g_A SF1-BO isoform; splicing, branch point sequence, protein/RNA recognition, complex E, KH domain, QUA2 homology; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=31.48 E-value=26 Score=21.12 Aligned_cols=16 Identities=13% Similarity=0.258 Sum_probs=13.3
Q ss_pred HHHHHHHHhCceeeee
Q 033333 18 ALRETIEEAGVTGIVE 33 (121)
Q Consensus 18 a~REl~EEtG~~~~~~ 33 (121)
-+|.+.||||+++.+.
T Consensus 34 tiK~Iq~eTG~kI~Ir 49 (131)
T 1k1g_A 34 TLKNIEKECNAKIMIR 49 (131)
T ss_dssp HHHHHHHHSCCEEEEE
T ss_pred HHHHHHHHHCCeEEec
Confidence 4688999999998764
No 93
>1zl8_A LIN-7; heterodimer, alpha helix, scaffold, assembly, specifici signaling, protein binding; NMR {Caenorhabditis elegans} SCOP: a.194.1.1
Probab=31.38 E-value=24 Score=17.79 Aligned_cols=9 Identities=44% Similarity=0.586 Sum_probs=6.9
Q ss_pred HHHHHHHHH
Q 033333 17 AALRETIEE 25 (121)
Q Consensus 17 aa~REl~EE 25 (121)
.|+||+.|-
T Consensus 43 ~aVREVYEh 51 (53)
T 1zl8_A 43 GAVREVYET 51 (53)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 578998874
No 94
>2ctm_A Vigilin; K homology type I domain, RNA-binding, cell sterol metabolism, beta-alpha-alpha-beta-BETA-alpha structure, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=31.34 E-value=26 Score=19.74 Aligned_cols=15 Identities=27% Similarity=0.279 Sum_probs=12.7
Q ss_pred HHHHHHHHhCceeee
Q 033333 18 ALRETIEEAGVTGIV 32 (121)
Q Consensus 18 a~REl~EEtG~~~~~ 32 (121)
.+|++.|+||+.+.+
T Consensus 38 ~Ir~I~e~tg~~I~i 52 (95)
T 2ctm_A 38 AIRKIMDEFKVDIRF 52 (95)
T ss_dssp HHHHHHHHHTCEEEC
T ss_pred hHHHHHHHHCCeEEe
Confidence 468999999998876
No 95
>1dtj_A RNA-binding neurooncological ventral antigen 2; KH domain, alpha-beta fold RNA-binding motif, immune system; 2.00A {Homo sapiens} SCOP: d.51.1.1 PDB: 1dt4_A
Probab=30.32 E-value=36 Score=17.92 Aligned_cols=17 Identities=24% Similarity=0.089 Sum_probs=13.9
Q ss_pred HHHHHHHHhCceeeeec
Q 033333 18 ALRETIEEAGVTGIVEC 34 (121)
Q Consensus 18 a~REl~EEtG~~~~~~~ 34 (121)
-+|++.++||..+.+..
T Consensus 24 ~Ik~I~~~tga~I~i~~ 40 (76)
T 1dtj_A 24 TLVEYQELTGARIQISK 40 (76)
T ss_dssp HHHHHHHHHCCEEEECC
T ss_pred HHHHHHHHhCCEEEECc
Confidence 46899999999987654
No 96
>2ctj_A Vigilin; K homology type I domain, RNA-binding, cell sterol metabolism, beta-alpha-alpha-beta-BETA-alpha structure, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=29.57 E-value=30 Score=19.56 Aligned_cols=15 Identities=33% Similarity=0.428 Sum_probs=12.1
Q ss_pred HHHHHHHHh-Cceeee
Q 033333 18 ALRETIEEA-GVTGIV 32 (121)
Q Consensus 18 a~REl~EEt-G~~~~~ 32 (121)
.+|++.||| |+.+.+
T Consensus 38 ~Ir~I~eetggv~I~i 53 (95)
T 2ctj_A 38 LIRSIMEECGGVHIHF 53 (95)
T ss_dssp HHHHHHHHHTSCEEEC
T ss_pred hHHHHHHHcCCCEEEe
Confidence 479999999 887755
No 97
>2drn_C 24-residues peptide from AN A-kinase anchoring protein; AKAP, PKA, signal transduction, 4-helix bundle, helix- loop-helix; NMR {Rattus norvegicus}
Probab=28.35 E-value=42 Score=14.15 Aligned_cols=10 Identities=50% Similarity=0.398 Sum_probs=7.7
Q ss_pred CHHHHHHHHH
Q 033333 13 SIQEAALRET 22 (121)
Q Consensus 13 ~~~eaa~REl 22 (121)
+++|+|.|.+
T Consensus 2 sIEEaA~RIV 11 (26)
T 2drn_C 2 LIEEAASRIV 11 (26)
T ss_dssp CHHHHHHHHH
T ss_pred cHHHHHHHHH
Confidence 5788888866
No 98
>1x4n_A FAR upstream element binding protein 1; KH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.51.1.1 PDB: 2opu_A
Probab=28.27 E-value=37 Score=18.84 Aligned_cols=17 Identities=12% Similarity=0.139 Sum_probs=13.8
Q ss_pred HHHHHHHHhCceeeeec
Q 033333 18 ALRETIEEAGVTGIVEC 34 (121)
Q Consensus 18 a~REl~EEtG~~~~~~~ 34 (121)
-+|++.|+||..+.+..
T Consensus 36 ~Ik~I~~~tga~I~I~~ 52 (92)
T 1x4n_A 36 QISRIQQESGCKIQIAP 52 (92)
T ss_dssp HHHHHHHHSCCEEEECS
T ss_pred HHHHHHHHhCCEEEEcC
Confidence 46889999999987754
No 99
>2ctl_A Vigilin; K homology type I domain, RNA-binding, cell sterol metabolism, beta-alpha-alpha-beta-BETA-alpha structure, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=28.05 E-value=32 Score=19.41 Aligned_cols=17 Identities=12% Similarity=-0.087 Sum_probs=13.5
Q ss_pred HHHHHHHHhCceeeeec
Q 033333 18 ALRETIEEAGVTGIVEC 34 (121)
Q Consensus 18 a~REl~EEtG~~~~~~~ 34 (121)
-+|++.|+||+.+.+..
T Consensus 38 ~Ik~I~~etg~~I~i~~ 54 (97)
T 2ctl_A 38 VITQIRLEHDVNIQFPD 54 (97)
T ss_dssp HHHHHHHHHTCEEECCC
T ss_pred hHHHHHHHHCCEEEecC
Confidence 36889999999887643
No 100
>2cte_A Vigilin; K homology type I domain, RNA-binding, cell sterol metabolism, beta-alpha-alpha-beta-BETA-alpha structure, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=27.70 E-value=26 Score=19.58 Aligned_cols=16 Identities=6% Similarity=-0.006 Sum_probs=13.1
Q ss_pred HHHHHHHHhCceeeee
Q 033333 18 ALRETIEEAGVTGIVE 33 (121)
Q Consensus 18 a~REl~EEtG~~~~~~ 33 (121)
-+|++.||||+.+.+.
T Consensus 38 ~Ik~I~~etg~~I~i~ 53 (94)
T 2cte_A 38 KLQDLELKTATKIQIP 53 (94)
T ss_dssp HHHHHHHHTTCCCBCC
T ss_pred hHHHHHHHHCCEEEeC
Confidence 3689999999998764
No 101
>1bm8_A Transcription factor MBP1; cell cycle, cyclins, DNA synthesis, helix-turn-helix DNA- binding domain; 1.71A {Saccharomyces cerevisiae} SCOP: d.34.1.1
Probab=27.35 E-value=30 Score=19.93 Aligned_cols=24 Identities=13% Similarity=0.434 Sum_probs=17.0
Q ss_pred eEEEeHHHHHHhcCchhHHHHHHH
Q 033333 75 RKWMSVAEARKVCQHWWMKEALDR 98 (121)
Q Consensus 75 ~~W~~~~~l~~~~~~~~~~~~~~~ 98 (121)
--|+|++.+.++...-.+.+.+.-
T Consensus 72 GtWIP~e~A~~LA~~~~I~~~l~p 95 (99)
T 1bm8_A 72 GTWVPLNIAKQLAEKFSVYDQLKP 95 (99)
T ss_dssp EEEECHHHHHHHHHHTTCHHHHHH
T ss_pred EEEeCHHHHHHHHHHcCCHHHHHH
Confidence 589999999998765545554433
No 102
>1ec6_A RNA-binding protein NOVA-2; KH domain, alpha-beta fold, RNA-binding motif, protein/RNA structure, RNA binding protein/RNA complex; 2.40A {Homo sapiens} SCOP: d.51.1.1
Probab=25.39 E-value=48 Score=18.04 Aligned_cols=17 Identities=24% Similarity=0.089 Sum_probs=13.8
Q ss_pred HHHHHHHHhCceeeeec
Q 033333 18 ALRETIEEAGVTGIVEC 34 (121)
Q Consensus 18 a~REl~EEtG~~~~~~~ 34 (121)
-+|++.++||..+.+..
T Consensus 24 ~Ik~I~~~tga~I~I~~ 40 (87)
T 1ec6_A 24 TLVEYQELTGARIQISK 40 (87)
T ss_dssp HHHHHHHHHCCEEEECC
T ss_pred hHHHHHHHhCCEEEEcc
Confidence 46899999999987644
No 103
>1frr_A Ferredoxin I; electron transfer(iron-sulfur protein); 1.80A {Equisetum arvense} SCOP: d.15.4.1
Probab=22.44 E-value=47 Score=18.18 Aligned_cols=22 Identities=32% Similarity=0.321 Sum_probs=16.5
Q ss_pred CCc----ccCCCCCHHHHHHHHHHHHhCcee
Q 033333 4 PKG----GWEIDESIQEAALRETIEEAGVTG 30 (121)
Q Consensus 4 PgG----~ve~gE~~~eaa~REl~EEtG~~~ 30 (121)
|.| .+++|+++.++|.+ .|+.+
T Consensus 9 ~~g~~~~~~~~g~tlL~a~~~-----~gi~i 34 (95)
T 1frr_A 9 PSGEFTLDVPEGTTILDAAEE-----AGYDL 34 (95)
T ss_dssp TTEEEEEEECTTCCHHHHHHH-----TTCCC
T ss_pred CCCcEEEEeCCCCcHHHHHHH-----cCCCC
Confidence 666 36789999999976 47654
No 104
>1awd_A Ferredoxin; electron transport, eukaryotic, green ALGA, electron transfer, metalloprotein; 1.40A {'chlorella' fusca} SCOP: d.15.4.1
Probab=22.43 E-value=50 Score=18.13 Aligned_cols=22 Identities=36% Similarity=0.394 Sum_probs=16.4
Q ss_pred CCc----ccCCCCCHHHHHHHHHHHHhCcee
Q 033333 4 PKG----GWEIDESIQEAALRETIEEAGVTG 30 (121)
Q Consensus 4 PgG----~ve~gE~~~eaa~REl~EEtG~~~ 30 (121)
|+| .+++|+++.++|.+ .|+.+
T Consensus 8 ~~g~~~~~~~~g~tlL~a~~~-----~gi~i 33 (94)
T 1awd_A 8 PSGEETIECPEDTYILDAAEE-----AGLDL 33 (94)
T ss_dssp TTEEEEEECCTTSCHHHHHHH-----TTCCC
T ss_pred CCCcEEEEECCCCcHHHHHHH-----cCCCC
Confidence 666 36789999999977 47653
No 105
>2cpq_A FragIle X mental retardation syndrome related protein 1, isoform B'; KH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=22.13 E-value=78 Score=17.81 Aligned_cols=17 Identities=18% Similarity=0.204 Sum_probs=13.8
Q ss_pred HHHHHHHHhCce-eeeec
Q 033333 18 ALRETIEEAGVT-GIVEC 34 (121)
Q Consensus 18 a~REl~EEtG~~-~~~~~ 34 (121)
-+|++.|+||.. +.+..
T Consensus 36 ~Ik~I~e~tGv~~IdI~e 53 (91)
T 2cpq_A 36 NIQQARKVPGVTAIELDE 53 (91)
T ss_dssp HHHHHHTSTTEEEEEEET
T ss_pred HHHHHHHHhCCeEEEEEc
Confidence 469999999997 87753
No 106
>1wri_A Ferredoxin II, ferredoxin; electron transport; 1.20A {Equisetum arvense} SCOP: d.15.4.1
Probab=21.68 E-value=48 Score=18.19 Aligned_cols=19 Identities=21% Similarity=0.305 Sum_probs=14.4
Q ss_pred cCCc----ccCCCCCHHHHHHHH
Q 033333 3 FPKG----GWEIDESIQEAALRE 21 (121)
Q Consensus 3 lPgG----~ve~gE~~~eaa~RE 21 (121)
.|+| .+++|+++.++|.+.
T Consensus 8 ~~~~~~~~~~~~g~tlL~a~~~~ 30 (93)
T 1wri_A 8 TPDGDITFDVEPGERLIDIGSEK 30 (93)
T ss_dssp ETTEEEEEEECTTSCHHHHHHHH
T ss_pred ECCCeEEEEECCCCcHHHHHHHC
Confidence 3666 367899999999763
No 107
>2yzt_A Putative uncharacterized protein TTHA1756; uncharacterized conserved protein, structural genomics, UNKN function, NPPSFA; 1.80A {Thermus thermophilus}
Probab=20.69 E-value=39 Score=17.55 Aligned_cols=20 Identities=20% Similarity=0.214 Sum_probs=13.9
Q ss_pred cCCcccCCCCCHHHHHH--HHHHH
Q 033333 3 FPKGGWEIDESIQEAAL--RETIE 24 (121)
Q Consensus 3 lPgG~ve~gE~~~eaa~--REl~E 24 (121)
||| +-.|+|+++|.. ||+.+
T Consensus 24 lpg--~t~G~T~eEa~~~~~eAi~ 45 (67)
T 2yzt_A 24 LHA--HTQAQSFEELLRRLQEAIA 45 (67)
T ss_dssp GTE--EEEESSHHHHHHHHHHHHH
T ss_pred CCC--ceeeCCHHHHHHHHHHHHH
Confidence 565 667999999874 44444
Done!