BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033334
(121 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2XCZ|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor Homologue From Prochlorococcus Marinus
Length = 115
Score = 79.3 bits (194), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP +NI +V D +S+L E +S +A ++GKPE YVM L+ VPM+F G +P Y
Sbjct: 1 MPLINIQASVPAV-ADANSLLQELSSKLAELLGKPEKYVMTSLQCGVPMTFSGNTEPTCY 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKAH 106
E+ SIG L+ +++S + +E+ L +P R +I F D A
Sbjct: 60 VEVKSIGALDGSRTQEVSELVCGHIEQNLGIPADRIYIGFEDVPAR 105
>pdb|1HFO|A Chain A, The Structure Of The Macrophage Migration Inhibitory
Factor From Trichinella Spiralis.
pdb|1HFO|B Chain B, The Structure Of The Macrophage Migration Inhibitory
Factor From Trichinella Spiralis.
pdb|1HFO|C Chain C, The Structure Of The Macrophage Migration Inhibitory
Factor From Trichinella Spiralis.
pdb|1HFO|D Chain D, The Structure Of The Macrophage Migration Inhibitory
Factor From Trichinella Spiralis.
pdb|1HFO|E Chain E, The Structure Of The Macrophage Migration Inhibitory
Factor From Trichinella Spiralis.
pdb|1HFO|F Chain F, The Structure Of The Macrophage Migration Inhibitory
Factor From Trichinella Spiralis
Length = 113
Score = 79.0 bits (193), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 2 PCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYG 61
P ++TN+K V S LS ++ V NI+ KP +YV + + +SFGG+ +PAA+G
Sbjct: 1 PIFTLNTNIKATDV-PSDFLSSTSALVGNILSKPGSYVAVHINTDQQLSFGGSTNPAAFG 59
Query: 62 ELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKF 100
L+SIGG+ P N+ SA + L KL +PK+R +I F
Sbjct: 60 TLMSIGGIEPSRNRDHSAKLFDHLNTKLGIPKNRMYIHF 98
>pdb|4DH4|A Chain A, Macrophage Migration Inhibitory Factor Toxoplasma Gondii
Length = 114
Score = 73.6 bits (179), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%)
Query: 19 SILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYGELVSIGGLNPDVNKKLS 78
++L +A VA+ +GKP +YVM+ + M FGG+ DP A+ + SIGG+ N K++
Sbjct: 18 ALLKDAEKAVADALGKPLSYVMVGYSQTGQMRFGGSSDPCAFIRVASIGGITSSTNCKIA 77
Query: 79 AAISAILEKKLSVPKSRFFIKF 100
AA+SA E+ L VPK+R + F
Sbjct: 78 AALSAACERHLGVPKNRIYTTF 99
>pdb|1UIZ|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor From Xenopus Laevis.
pdb|1UIZ|B Chain B, Crystal Structure Of Macrophage Migration Inhibitory
Factor From Xenopus Laevis.
pdb|1UIZ|C Chain C, Crystal Structure Of Macrophage Migration Inhibitory
Factor From Xenopus Laevis.
pdb|1UIZ|D Chain D, Crystal Structure Of Macrophage Migration Inhibitory
Factor From Xenopus Laevis
Length = 115
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP I TNV D V ++LS+ T +A GKP Y+ I + MSFG + DP A
Sbjct: 1 MPVFTIRTNVCRDSV-PDTLLSDLTKQLAKATGKPAEYIAIHIVPDQIMSFGDSTDPCAV 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKA 105
L SIG + NK + + IL K+L++P +R +I +YD A
Sbjct: 60 CSLCSIGKIGGPQNKSYTKLLCDILTKQLNIPANRVYINYYDLNA 104
>pdb|2WKF|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor From Plasmodium Falciparum
Length = 125
Score = 67.0 bits (162), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 55/106 (51%)
Query: 2 PCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYG 61
PC + TNV L + S LS+ + +++++GKP Y+M + FGG+ + +
Sbjct: 1 PCCEVITNVNLPDDNVQSTLSQIENAISDVMGKPLGYIMSNYDYQKNLRFGGSNEAYCFV 60
Query: 62 ELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKAHQ 107
+ SIGG+N N L+ I+ +L L+V R +++F D A
Sbjct: 61 RITSIGGINRSNNSALADQITKLLVSNLNVKSRRIYVEFRDCSAQN 106
>pdb|3GAC|A Chain A, Structure Of Mif With Hpp
pdb|3GAC|B Chain B, Structure Of Mif With Hpp
pdb|3GAC|C Chain C, Structure Of Mif With Hpp
pdb|3GAC|D Chain D, Structure Of Mif With Hpp
pdb|3GAC|E Chain E, Structure Of Mif With Hpp
pdb|3GAC|F Chain F, Structure Of Mif With Hpp
pdb|3GAD|A Chain A, Structure Of Apomif
pdb|3GAD|B Chain B, Structure Of Apomif
pdb|3GAD|C Chain C, Structure Of Apomif
pdb|3GAD|D Chain D, Structure Of Apomif
pdb|3GAD|E Chain E, Structure Of Apomif
pdb|3GAD|F Chain F, Structure Of Apomif
Length = 117
Score = 65.9 bits (159), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%)
Query: 2 PCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYG 61
PC + TN+ + + LSE ++N++GKP AY+M + F G+ + +
Sbjct: 1 PCCELITNISIPDDKAQNALSEIEDAISNVLGKPVAYIMSNYDYQKNLRFSGSNEGYCFV 60
Query: 62 ELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKAHQ 107
L SIGG+N N L+ I+ IL L V R +I+F D A
Sbjct: 61 RLTSIGGINRSNNSSLADKITKILSNHLGVKPRRVYIEFRDCSAQN 106
>pdb|2WKB|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor From Plasmodium Berghei
pdb|2WKB|B Chain B, Crystal Structure Of Macrophage Migration Inhibitory
Factor From Plasmodium Berghei
pdb|2WKB|C Chain C, Crystal Structure Of Macrophage Migration Inhibitory
Factor From Plasmodium Berghei
pdb|2WKB|D Chain D, Crystal Structure Of Macrophage Migration Inhibitory
Factor From Plasmodium Berghei
pdb|2WKB|E Chain E, Crystal Structure Of Macrophage Migration Inhibitory
Factor From Plasmodium Berghei
pdb|2WKB|F Chain F, Crystal Structure Of Macrophage Migration Inhibitory
Factor From Plasmodium Berghei
Length = 125
Score = 62.8 bits (151), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%)
Query: 2 PCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYG 61
P + TN+ + + LSE ++NI+GKP AY+M + F G+ + +
Sbjct: 1 PXCELITNISIPDDKAQNTLSEIEDAISNILGKPVAYIMSNYDYQKNLRFSGSNEGYCFV 60
Query: 62 ELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKAHQ 107
L SIGG+N N L+ I+ IL LSV R +I+F D A
Sbjct: 61 RLTSIGGINRSNNSLLADKITKILSNHLSVKPRRVYIEFRDCSAQN 106
>pdb|2WKF|B Chain B, Crystal Structure Of Macrophage Migration Inhibitory
Factor From Plasmodium Falciparum
Length = 125
Score = 62.4 bits (150), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%)
Query: 2 PCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYG 61
P + TNV L + S LS+ + +++++GKP Y+M + FGG+ + +
Sbjct: 1 PXCEVITNVNLPDDNVQSTLSQIENAISDVMGKPLGYIMSNYDYQKNLRFGGSNEAYCFV 60
Query: 62 ELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKAHQ 107
+ SIGG+N N L+ I+ +L L+V R +++F D A
Sbjct: 61 RITSIGGINRSNNSALADQITKLLVSNLNVKSRRIYVEFRDCSAQN 106
>pdb|3FWT|A Chain A, Crystal Structure Of Leishmania Major Mif2
Length = 133
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP L +V LD +++ + +GKPE +VM P+SF G+ PAAY
Sbjct: 21 MPFLQTIVSVSLDDQKRANLSAAYGMICREELGKPEDFVMTAFSDKTPISFQGSTAPAAY 80
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTK 104
+ S G P K ++ I+A + K+ +P R ++ +Y TK
Sbjct: 81 VRVESWGEYAPSKPKMMTPRIAAAITKECGIPAERIYVFYYSTK 124
>pdb|1MIF|A Chain A, Macrophage Migration Inhibitory Factor (Mif)
pdb|1MIF|B Chain B, Macrophage Migration Inhibitory Factor (Mif)
pdb|1MIF|C Chain C, Macrophage Migration Inhibitory Factor (Mif)
Length = 115
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP ++TNV V LSE T +A GKP Y+ + + M+FGG+ +P A
Sbjct: 1 MPMFIVNTNVPRASV-PDGFLSELTQQLAQATGKPPQYIAVHVVPDQLMAFGGSSEPCAL 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKA 105
L SIG + N+ S + +L ++L + R +I +YD A
Sbjct: 60 CSLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNA 104
>pdb|3HOF|A Chain A, Structure Of Macrophage Migration Inhibitory Factor (Mif)
With Caffeic Acid At 1.9a Resolution
pdb|3HOF|B Chain B, Structure Of Macrophage Migration Inhibitory Factor (Mif)
With Caffeic Acid At 1.9a Resolution
pdb|3HOF|C Chain C, Structure Of Macrophage Migration Inhibitory Factor (Mif)
With Caffeic Acid At 1.9a Resolution
Length = 123
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP ++TNV V LSE T +A GKP Y+ + + M+FGG+ +P A
Sbjct: 1 MPMFIVNTNVPRASV-PDGFLSELTQQLAQATGKPPQYIAVHVVPDQLMAFGGSSEPCAL 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKA 105
L SIG + N+ S + +L ++L + R +I +YD A
Sbjct: 60 CSLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNA 104
>pdb|1GIF|A Chain A, Human Glycosylation-Inhibiting Factor
pdb|1GIF|B Chain B, Human Glycosylation-Inhibiting Factor
pdb|1GIF|C Chain C, Human Glycosylation-Inhibiting Factor
Length = 115
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP ++TNV V LSE T +A GKP Y+ + + M+FGG+ +P A
Sbjct: 1 MPMFIVNTNVPRASV-PDGFLSELTQQLAQATGKPPQYIAVHVVPDQLMAFGGSSEPCAL 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKA 105
L SIG + N+ S + +L ++L + R +I +YD A
Sbjct: 60 CSLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNA 104
>pdb|1MFF|A Chain A, Macrophage Migration Inhibitory Factor Y95f Mutant
pdb|1MFF|B Chain B, Macrophage Migration Inhibitory Factor Y95f Mutant
pdb|1MFF|C Chain C, Macrophage Migration Inhibitory Factor Y95f Mutant
Length = 114
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 2 PCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYG 61
P ++TNV V LSE T +A GKP Y+ + + M+F GT DP A
Sbjct: 1 PMFIVNTNVPRASV-PEGFLSELTQQLAQATGKPAQYIAVHVVPDQLMTFSGTNDPCALC 59
Query: 62 ELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKA 105
L SIG + N+ S + +L +L + R FI +YD A
Sbjct: 60 SLHSIGKIGGAQNRNYSKLLCGLLSDRLHISPDRVFINYYDMNA 103
>pdb|1MFI|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor Complexed With (E)-2-Fluoro-P-Hydroxycinnamate
pdb|1MFI|B Chain B, Crystal Structure Of Macrophage Migration Inhibitory
Factor Complexed With (E)-2-Fluoro-P-Hydroxycinnamate
pdb|1MFI|C Chain C, Crystal Structure Of Macrophage Migration Inhibitory
Factor Complexed With (E)-2-Fluoro-P-Hydroxycinnamate
pdb|2GDG|A Chain A, Crystal Structure Of Covalently Modified Macrophage
Inhibitory Factor
pdb|2GDG|B Chain B, Crystal Structure Of Covalently Modified Macrophage
Inhibitory Factor
pdb|2GDG|C Chain C, Crystal Structure Of Covalently Modified Macrophage
Inhibitory Factor
Length = 114
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 2 PCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYG 61
P ++TNV V LSE T +A GKP Y+ + + M+F GT DP A
Sbjct: 1 PMFIVNTNVPRASV-PEGFLSELTQQLAQATGKPAQYIAVHVVPDQLMTFSGTNDPCALC 59
Query: 62 ELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKA 105
L SIG + N+ S + +L +L + R +I +YD A
Sbjct: 60 SLHSIGKIGGAQNRNYSKLLCGLLSDRLHISPDRVYINYYDMNA 103
>pdb|4EVG|A Chain A, Crystal Structure Of Mif L46a Mutant
pdb|4EVG|B Chain B, Crystal Structure Of Mif L46a Mutant
pdb|4EVG|C Chain C, Crystal Structure Of Mif L46a Mutant
Length = 114
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Query: 2 PCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYG 61
P ++TNV V LSE T +A GKP Y+ + + M+FGG+ +P A
Sbjct: 1 PMFIVNTNVPRASV-PDGFLSELTQQLAQATGKPPQYIAVHVVPDQAMAFGGSSEPCALC 59
Query: 62 ELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKA 105
L SIG + N+ S + +L ++L + R +I +YD A
Sbjct: 60 SLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNA 103
>pdb|4ETG|A Chain A, Crystal Structure Of Mif L46g Mutant
pdb|4ETG|B Chain B, Crystal Structure Of Mif L46g Mutant
pdb|4ETG|C Chain C, Crystal Structure Of Mif L46g Mutant
Length = 114
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Query: 2 PCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYG 61
P ++TNV V LSE T +A GKP Y+ + + M+FGG+ +P A
Sbjct: 1 PMFIVNTNVPRASV-PDGFLSELTQQLAQATGKPPQYIAVHVVPDQGMAFGGSSEPCALC 59
Query: 62 ELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKA 105
L SIG + N+ S + +L ++L + R +I +YD A
Sbjct: 60 SLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNA 103
>pdb|1GCZ|A Chain A, Macrophage Migration Inhibitory Factor (Mif) Complexed
With Inhibitor.
pdb|1GCZ|B Chain B, Macrophage Migration Inhibitory Factor (Mif) Complexed
With Inhibitor.
pdb|1GCZ|C Chain C, Macrophage Migration Inhibitory Factor (Mif) Complexed
With Inhibitor.
pdb|1GD0|A Chain A, Human Macrophage Migration Inhibitory Factor (Mif)
pdb|1GD0|B Chain B, Human Macrophage Migration Inhibitory Factor (Mif)
pdb|1GD0|C Chain C, Human Macrophage Migration Inhibitory Factor (Mif)
pdb|3JSF|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Hydroxyquinoline Inhibitor 638 At
1.93a Resolution
pdb|3JSF|B Chain B, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Hydroxyquinoline Inhibitor 638 At
1.93a Resolution
pdb|3JSF|C Chain C, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Hydroxyquinoline Inhibitor 638 At
1.93a Resolution
pdb|3JSG|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor Hydroxyquinoline Inhibitor 707 At 1.58a
Resolution
pdb|3JSG|B Chain B, Crystal Structure Of Macrophage Migration Inhibitory
Factor Hydroxyquinoline Inhibitor 707 At 1.58a
Resolution
pdb|3JSG|C Chain C, Crystal Structure Of Macrophage Migration Inhibitory
Factor Hydroxyquinoline Inhibitor 707 At 1.58a
Resolution
pdb|3JTU|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor Hydroxyquinoline Inhibitor 708 At 1.86a
Resolution
pdb|3JTU|B Chain B, Crystal Structure Of Macrophage Migration Inhibitory
Factor Hydroxyquinoline Inhibitor 708 At 1.86a
Resolution
pdb|3JTU|C Chain C, Crystal Structure Of Macrophage Migration Inhibitory
Factor Hydroxyquinoline Inhibitor 708 At 1.86a
Resolution
pdb|3L5P|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Imidazopyridazinol Inhibitor At 1.80a
Resolution
pdb|3L5P|B Chain B, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Imidazopyridazinol Inhibitor At 1.80a
Resolution
pdb|3L5P|C Chain C, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Imidazopyridazinol Inhibitor At 1.80a
Resolution
pdb|3L5R|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Phenylchromenone Inhibitor At 1.94a
Resolution
pdb|3L5R|B Chain B, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Phenylchromenone Inhibitor At 1.94a
Resolution
pdb|3L5R|C Chain C, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Phenylchromenone Inhibitor At 1.94a
Resolution
pdb|3L5S|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Imidazopyrimidinylphenyl Inhibitor At
1.86a Resolution
pdb|3L5S|B Chain B, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Imidazopyrimidinylphenyl Inhibitor At
1.86a Resolution
pdb|3L5S|C Chain C, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Imidazopyrimidinylphenyl Inhibitor At
1.86a Resolution
pdb|3L5T|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Thiophenepiperazinylquinolinone
Inhibitor At 1.86a Resolution
pdb|3L5T|B Chain B, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Thiophenepiperazinylquinolinone
Inhibitor At 1.86a Resolution
pdb|3L5T|C Chain C, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Thiophenepiperazinylquinolinone
Inhibitor At 1.86a Resolution
pdb|3L5U|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Benzothiazole Inhibitor At 1.90a
Resolution
pdb|3L5U|B Chain B, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Benzothiazole Inhibitor At 1.90a
Resolution
pdb|3L5U|C Chain C, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Benzothiazole Inhibitor At 1.90a
Resolution
pdb|3L5V|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Glycerol At 1.70a Resolution
pdb|3L5V|B Chain B, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Glycerol At 1.70a Resolution
pdb|3L5V|C Chain C, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Glycerol At 1.70a Resolution
Length = 122
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Query: 2 PCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYG 61
P ++TNV V LSE T +A GKP Y+ + + M+FGG+ +P A
Sbjct: 1 PMFIVNTNVPRASV-PDGFLSELTQQLAQATGKPPQYIAVHVVPDQLMAFGGSSEPCALC 59
Query: 62 ELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKA 105
L SIG + N+ S + +L ++L + R +I +YD A
Sbjct: 60 SLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNA 103
>pdb|1CA7|A Chain A, Macrophage Migration Inhibitory Factor (Mif) With
Hydroxphenylpyruvate
pdb|1CA7|B Chain B, Macrophage Migration Inhibitory Factor (Mif) With
Hydroxphenylpyruvate
pdb|1CA7|C Chain C, Macrophage Migration Inhibitory Factor (Mif) With
Hydroxphenylpyruvate
pdb|1LJT|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor Complexed With
(S,R)-3-(4-Hydroxyphenyl)-4,5-Dihydro-5-
Isoxazole-Acetic Acid Methyl Ester (Iso-1)
pdb|1LJT|B Chain B, Crystal Structure Of Macrophage Migration Inhibitory
Factor Complexed With
(S,R)-3-(4-Hydroxyphenyl)-4,5-Dihydro-5-
Isoxazole-Acetic Acid Methyl Ester (Iso-1)
pdb|1LJT|C Chain C, Crystal Structure Of Macrophage Migration Inhibitory
Factor Complexed With
(S,R)-3-(4-Hydroxyphenyl)-4,5-Dihydro-5-
Isoxazole-Acetic Acid Methyl Ester (Iso-1)
pdb|2OOH|A Chain A, Crystal Structure Of Mif Bound To A Novel Inhibitor,
Oxim-11
pdb|2OOH|B Chain B, Crystal Structure Of Mif Bound To A Novel Inhibitor,
Oxim-11
pdb|2OOH|C Chain C, Crystal Structure Of Mif Bound To A Novel Inhibitor,
Oxim-11
pdb|2OOW|A Chain A, Mif Bound To A Fluorinated Oxim Derivative
pdb|2OOW|B Chain B, Mif Bound To A Fluorinated Oxim Derivative
pdb|2OOW|C Chain C, Mif Bound To A Fluorinated Oxim Derivative
pdb|2OOZ|A Chain A, Macrophage Migration Inhibitory Factor (Mif) Complexed
With Oxim6 (An Oxim Derivative Not Containing A Ring In
Its R-Group)
pdb|2OOZ|B Chain B, Macrophage Migration Inhibitory Factor (Mif) Complexed
With Oxim6 (An Oxim Derivative Not Containing A Ring In
Its R-Group)
pdb|2OOZ|C Chain C, Macrophage Migration Inhibitory Factor (Mif) Complexed
With Oxim6 (An Oxim Derivative Not Containing A Ring In
Its R-Group)
pdb|3B9S|A Chain A, Macrophage Migration Inhibitory Factor (Mif) Complexed
With Inhibitor, 4-Ipp.
pdb|3B9S|B Chain B, Macrophage Migration Inhibitory Factor (Mif) Complexed
With Inhibitor, 4-Ipp.
pdb|3B9S|C Chain C, Macrophage Migration Inhibitory Factor (Mif) Complexed
With Inhibitor, 4-Ipp.
pdb|3DJH|A Chain A, Macrophage Migration Inhibitory Factor (Mif) At 1.25 A
Resolution
pdb|3DJH|B Chain B, Macrophage Migration Inhibitory Factor (Mif) At 1.25 A
Resolution
pdb|3DJH|C Chain C, Macrophage Migration Inhibitory Factor (Mif) At 1.25 A
Resolution
pdb|3DJI|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor Bound To An Acetaminophen Dimer Derived From
Napqi
pdb|3DJI|B Chain B, Crystal Structure Of Macrophage Migration Inhibitory
Factor Bound To An Acetaminophen Dimer Derived From
Napqi
pdb|3DJI|C Chain C, Crystal Structure Of Macrophage Migration Inhibitory
Factor Bound To An Acetaminophen Dimer Derived From
Napqi
pdb|3DJI|D Chain D, Crystal Structure Of Macrophage Migration Inhibitory
Factor Bound To An Acetaminophen Dimer Derived From
Napqi
pdb|3DJI|E Chain E, Crystal Structure Of Macrophage Migration Inhibitory
Factor Bound To An Acetaminophen Dimer Derived From
Napqi
pdb|3DJI|F Chain F, Crystal Structure Of Macrophage Migration Inhibitory
Factor Bound To An Acetaminophen Dimer Derived From
Napqi
pdb|3CE4|A Chain A, Structure Of Macrophage Migration Inhibitory Factor
Covalently Inhibited By Pmsf Treatment
pdb|3CE4|B Chain B, Structure Of Macrophage Migration Inhibitory Factor
Covalently Inhibited By Pmsf Treatment
pdb|3CE4|C Chain C, Structure Of Macrophage Migration Inhibitory Factor
Covalently Inhibited By Pmsf Treatment
pdb|3IJG|A Chain A, Macrophage Migration Inhibitory Factor (Mif) Bound To The
(R)- Stereoisomer Of Av1013
pdb|3IJG|B Chain B, Macrophage Migration Inhibitory Factor (Mif) Bound To The
(R)- Stereoisomer Of Av1013
pdb|3IJG|C Chain C, Macrophage Migration Inhibitory Factor (Mif) Bound To The
(R)- Stereoisomer Of Av1013
pdb|3IJJ|A Chain A, Ternary Complex Of Macrophage Migration Inhibitory Factor
(Mif) Bound Both To 4-Hydroxyphenylpyruvate And To The
Allosteric Inhibitor Av1013 (R-Stereoisomer)
pdb|3IJJ|B Chain B, Ternary Complex Of Macrophage Migration Inhibitory Factor
(Mif) Bound Both To 4-Hydroxyphenylpyruvate And To The
Allosteric Inhibitor Av1013 (R-Stereoisomer)
pdb|3IJJ|C Chain C, Ternary Complex Of Macrophage Migration Inhibitory Factor
(Mif) Bound Both To 4-Hydroxyphenylpyruvate And To The
Allosteric Inhibitor Av1013 (R-Stereoisomer)
pdb|4F2K|A Chain A, Macrophage Migration Inhibitory Factor Covalently
Complexed With Phenethylisothiocyanate
pdb|4F2K|B Chain B, Macrophage Migration Inhibitory Factor Covalently
Complexed With Phenethylisothiocyanate
pdb|4F2K|C Chain C, Macrophage Migration Inhibitory Factor Covalently
Complexed With Phenethylisothiocyanate
pdb|3U18|A Chain A, Chicago Sky Blue 6b, A Novel Inhibitor For Macrophage
Migration Inhibitory Factor
pdb|3U18|B Chain B, Chicago Sky Blue 6b, A Novel Inhibitor For Macrophage
Migration Inhibitory Factor
pdb|3U18|C Chain C, Chicago Sky Blue 6b, A Novel Inhibitor For Macrophage
Migration Inhibitory Factor
pdb|3SMB|A Chain A, Phenethylisothiocyanate Covalently Bound To Macrophage
Migration Inhibitory Factor (mif)
pdb|3SMB|B Chain B, Phenethylisothiocyanate Covalently Bound To Macrophage
Migration Inhibitory Factor (mif)
pdb|3SMB|C Chain C, Phenethylisothiocyanate Covalently Bound To Macrophage
Migration Inhibitory Factor (mif)
pdb|3SMC|A Chain A, Macrophage Migration Inhibitory Factor (mif) With
Covalently Bound L- Sulforaphane
pdb|3SMC|B Chain B, Macrophage Migration Inhibitory Factor (mif) With
Covalently Bound L- Sulforaphane
pdb|3SMC|C Chain C, Macrophage Migration Inhibitory Factor (mif) With
Covalently Bound L- Sulforaphane
Length = 114
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Query: 2 PCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYG 61
P ++TNV V LSE T +A GKP Y+ + + M+FGG+ +P A
Sbjct: 1 PMFIVNTNVPRASV-PDGFLSELTQQLAQATGKPPQYIAVHVVPDQLMAFGGSSEPCALC 59
Query: 62 ELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKA 105
L SIG + N+ S + +L ++L + R +I +YD A
Sbjct: 60 SLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNA 103
>pdb|4EUI|A Chain A, Crystal Structure Of Mif L46f Mutant
pdb|4EUI|B Chain B, Crystal Structure Of Mif L46f Mutant
pdb|4EUI|C Chain C, Crystal Structure Of Mif L46f Mutant
Length = 114
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Query: 2 PCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYG 61
P ++TNV V LSE T +A GKP Y+ + + M+FGG+ +P A
Sbjct: 1 PMFIVNTNVPRASV-PDGFLSELTQQLAQATGKPPQYIAVHVVPDQFMAFGGSSEPCALC 59
Query: 62 ELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKA 105
L SIG + N+ S + +L ++L + R +I +YD A
Sbjct: 60 SLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNA 103
>pdb|1P1G|A Chain A, Macrophage Migration Inhibitory Factor (Mif) With Pro-1
Mutated To Gly-1
pdb|1P1G|B Chain B, Macrophage Migration Inhibitory Factor (Mif) With Pro-1
Mutated To Gly-1
pdb|1P1G|C Chain C, Macrophage Migration Inhibitory Factor (Mif) With Pro-1
Mutated To Gly-1
Length = 114
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 6 ISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYGELVS 65
++TNV V LSE T +A GKP Y+ + + M+FGG+ +P A L S
Sbjct: 5 VNTNVPRASV-PDGFLSELTQQLAQATGKPPQYIAVHVVPDQLMAFGGSSEPCALCSLHS 63
Query: 66 IGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKA 105
IG + N+ S + +L ++L + R +I +YD A
Sbjct: 64 IGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNA 103
>pdb|1CGQ|A Chain A, Macrophage Migration Inhibitory Factor (Mif) With Alanine
Inserted Between Pro-1 And Met-2
pdb|1CGQ|B Chain B, Macrophage Migration Inhibitory Factor (Mif) With Alanine
Inserted Between Pro-1 And Met-2
pdb|1CGQ|C Chain C, Macrophage Migration Inhibitory Factor (Mif) With Alanine
Inserted Between Pro-1 And Met-2
Length = 115
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 6 ISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYGELVS 65
++TNV V LSE T +A GKP Y+ + + M+FGG+ +P A L S
Sbjct: 6 VNTNVPRASV-PDGFLSELTQQLAQATGKPPQYIAVHVVPDQLMAFGGSSEPCALCSLHS 64
Query: 66 IGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKA 105
IG + N+ S + +L ++L + R +I +YD A
Sbjct: 65 IGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNA 104
>pdb|3FWU|A Chain A, Crystal Structure Of Leishmania Major Mif1
Length = 133
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 51/101 (50%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP + + LD ++ + +++GKPE VM+ S PM F G+ DP A
Sbjct: 21 MPVIQTFVSTPLDHHKRENLAQVYRAVTRDVLGKPEDLVMMTFHDSTPMHFFGSTDPVAC 80
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFY 101
+ ++GG P +K+++ ++A + K+ + R F+ ++
Sbjct: 81 VRVEALGGYGPSEPEKVTSIVTAAITKECGIVADRIFVLYF 121
>pdb|1FIM|A Chain A, Macrophage Migration Inhibitory Factor
Length = 114
Score = 55.8 bits (133), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Query: 2 PCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYG 61
P ++TNV V LSE T +A GKP Y+ + + +F GT DP A
Sbjct: 1 PAFIVNTNVPRASV-PEGFLSELTQQLAQATGKPAQYIAVHVVPDQLXTFSGTSDPCALC 59
Query: 62 ELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKA 105
L SIG + N+ S + +L +L + R +I +YD A
Sbjct: 60 SLHSIGKIGGAQNRNYSKLLCGLLSDRLHISPDRVYINYYDANA 103
>pdb|3B64|A Chain A, Macrophage Migration Inhibitory Factor (Mif) From
LEISHMANIA MAJOR
Length = 112
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 50/100 (50%)
Query: 2 PCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYG 61
P + + LD ++ + +++GKPE VM+ S PM F G+ DP A
Sbjct: 1 PVIQTFVSTPLDHHKRENLAQVYRAVTRDVLGKPEDLVMMTFHDSTPMHFFGSTDPVACV 60
Query: 62 ELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFY 101
+ ++GG P +K+++ ++A + K+ + R F+ ++
Sbjct: 61 RVEALGGYGPSEPEKVTSIVTAAITKECGIVADRIFVLYF 100
>pdb|3T5S|A Chain A, Structure Of Macrophage Migration Inhibitory Factor From
Giardia Lamblia
Length = 135
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MPC ++TN + + +A GKP +Y M ++ MSFG + D +
Sbjct: 22 MPCAIVTTNADFTKDQADAFCLDMGQVLAKETGKPVSYCMAGVR-KADMSFGTSTDLCCF 80
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKAH 106
+ IG ++ N +SAAI+ L + V R +I F + K H
Sbjct: 81 VDFYCIGVISQAKNPSISAAITGCLTQHFKVKPERVYISFNEAKGH 126
>pdb|1DPT|A Chain A, D-Dopachrome Tautomerase
pdb|1DPT|B Chain B, D-Dopachrome Tautomerase
pdb|1DPT|C Chain C, D-Dopachrome Tautomerase
pdb|3KAN|A Chain A, D-Dopachrome Tautomerase (D-Dt)MACROPHAGE MIGRATION
INHIBITORY FACTOR 2 (Mif2) Complexed With Inhibitor
4-Ipp
pdb|3KAN|B Chain B, D-Dopachrome Tautomerase (D-Dt)MACROPHAGE MIGRATION
INHIBITORY FACTOR 2 (Mif2) Complexed With Inhibitor
4-Ipp
pdb|3KAN|C Chain C, D-Dopachrome Tautomerase (D-Dt)MACROPHAGE MIGRATION
INHIBITORY FACTOR 2 (Mif2) Complexed With Inhibitor
4-Ipp
Length = 117
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
Query: 2 PCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYG 61
P L + TN+ + V + + + A+I+GKP V + ++ + M+ G+ +P A
Sbjct: 1 PFLELDTNLPANRVP-AGLEKRLCAAAASILGKPADRVNVTVRPGLAMALSGSTEPCAQL 59
Query: 62 ELVSIG--GLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKAHQ 107
+ SIG G D N+ SA L K+L++ + R I+F+ ++ Q
Sbjct: 60 SISSIGVVGTAED-NRSHSAHFFEFLTKELALGQDRILIRFFPLESWQ 106
>pdb|2OS5|A Chain A, Macrophage Migration Inhibitory Factor From Ancylostoma
Ceylanicum
pdb|2OS5|B Chain B, Macrophage Migration Inhibitory Factor From Ancylostoma
Ceylanicum
pdb|2OS5|C Chain C, Macrophage Migration Inhibitory Factor From Ancylostoma
Ceylanicum
pdb|2OS5|D Chain D, Macrophage Migration Inhibitory Factor From Ancylostoma
Ceylanicum
Length = 119
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP + ++TN+ V ++ T +A + KP + I + ++ G + +P A
Sbjct: 1 MPMVRVATNLPDKDV-PANFEERLTDLLAESMNKPRNRIAIEVLAGQRITHGASRNPVAV 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYD 102
++ SIG L+ D N + + I+ + L +PK + I ++D
Sbjct: 60 IKVESIGALSADDNIRHTQKITQFCQDTLKLPKDKVIITYFD 101
>pdb|3RF4|A Chain A, Ancylostoma Ceylanicum Mif In Complex With Furosemide
pdb|3RF4|B Chain B, Ancylostoma Ceylanicum Mif In Complex With Furosemide
pdb|3RF4|C Chain C, Ancylostoma Ceylanicum Mif In Complex With Furosemide
pdb|3RF5|A Chain A, Ancylostoma Ceylanicum Mif In Complex With
N-(2,3,4,5,6-Pentafluoro- Benzyl)-4-Sulfamoyl-Benzamide
pdb|3RF5|B Chain B, Ancylostoma Ceylanicum Mif In Complex With
N-(2,3,4,5,6-Pentafluoro- Benzyl)-4-Sulfamoyl-Benzamide
pdb|3RF5|C Chain C, Ancylostoma Ceylanicum Mif In Complex With
N-(2,3,4,5,6-Pentafluoro- Benzyl)-4-Sulfamoyl-Benzamide
Length = 116
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 2 PCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYG 61
P + ++TN+ V ++ T +A + KP + I + ++ G + +P A
Sbjct: 1 PMVRVATNLPDKDV-PANFEERLTDLLAESMNKPRNRIAIEVLAGQRITHGASRNPVAVI 59
Query: 62 ELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYD 102
++ SIG L+ D N + + I+ + L +PK + I ++D
Sbjct: 60 KVESIGALSADDNIRHTQKITQFCQDTLKLPKDKVIITYFD 100
>pdb|3KER|A Chain A, D-Dopachrome Tautomerase (D-Dt) MACROPHAGE MIGRATION
INHIBITORY Factor 2 (Mif2) Complexed With Inhibitor
4-Ipp
pdb|3KER|B Chain B, D-Dopachrome Tautomerase (D-Dt) MACROPHAGE MIGRATION
INHIBITORY Factor 2 (Mif2) Complexed With Inhibitor
4-Ipp
pdb|3KER|C Chain C, D-Dopachrome Tautomerase (D-Dt) MACROPHAGE MIGRATION
INHIBITORY Factor 2 (Mif2) Complexed With Inhibitor
4-Ipp
pdb|3KER|D Chain D, D-Dopachrome Tautomerase (D-Dt) MACROPHAGE MIGRATION
INHIBITORY Factor 2 (Mif2) Complexed With Inhibitor
4-Ipp
Length = 117
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Query: 2 PCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYG 61
P + + TN+ + + + + + A I+ KPE V + ++ + + + +P A+
Sbjct: 1 PFVELETNLPASRIP-AGLENRLCAATATILDKPEDRVSVTIRPGMTLLMNKSTEPCAHL 59
Query: 62 ELVSIGGL-NPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKAHQ 107
+ SIG + + N+ SA+ L ++LS+ + R I+F+ +A Q
Sbjct: 60 LVSSIGVVGTAEQNRTHSASFFKFLTEELSLDQDRIVIRFFPLEAWQ 106
>pdb|1H99|A Chain A, Prd Of Lict Antiterminator From Bacillus Subtilis
Length = 224
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 13/111 (11%)
Query: 4 LNISTNVKLDGVDTSSILSEATSTVAN---IIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
+N + G+D + L T + IGK EA VM+ K V + ED A +
Sbjct: 48 INFAIQRNQKGLDIKNALLWETKRLYKDEFAIGK-EALVMVKNKTGVSLP----EDEAGF 102
Query: 61 GELVSIGGLNPDVNKKLSAAI--SAILEKKLSVPKSRFFIKFYDTKAHQSR 109
+++ +N ++N+++ I + ++E+ LS+ K F I+F + H R
Sbjct: 103 ---IALHIVNAELNEEMPNIINITKVMEEILSIVKYHFKIEFNEESLHYYR 150
>pdb|1TLV|A Chain A, Structure Of The Native And Inactive Lict Prd From B.
Subtilis
Length = 221
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 13/111 (11%)
Query: 4 LNISTNVKLDGVDTSSILSEATSTVAN---IIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
+N + G+D + L T + IGK EA VM+ K V + ED A +
Sbjct: 48 INFAIQRNQKGLDIKNALLWETKRLYKDEFAIGK-EALVMVKNKTGVSLP----EDEAGF 102
Query: 61 GELVSIGGLNPDVNKKLSAAI--SAILEKKLSVPKSRFFIKFYDTKAHQSR 109
+++ +N ++N+++ I + ++++ LS+ K F I+F + H R
Sbjct: 103 ---IALHIVNAELNEEMPNIINITKVMQEILSIVKYHFKIEFNEESLHYYR 150
>pdb|1Z0E|A Chain A, Crystal Structure Of A. Fulgidus Lon Proteolytic Domain
pdb|1Z0E|B Chain B, Crystal Structure Of A. Fulgidus Lon Proteolytic Domain
pdb|1Z0E|C Chain C, Crystal Structure Of A. Fulgidus Lon Proteolytic Domain
pdb|1Z0E|D Chain D, Crystal Structure Of A. Fulgidus Lon Proteolytic Domain
pdb|1Z0E|E Chain E, Crystal Structure Of A. Fulgidus Lon Proteolytic Domain
pdb|1Z0E|F Chain F, Crystal Structure Of A. Fulgidus Lon Proteolytic Domain
pdb|1Z0G|A Chain A, Crystal Structure Of A. Fulgidus Lon Proteolytic Domain
pdb|1Z0G|B Chain B, Crystal Structure Of A. Fulgidus Lon Proteolytic Domain
pdb|1Z0G|C Chain C, Crystal Structure Of A. Fulgidus Lon Proteolytic Domain
pdb|1Z0G|D Chain D, Crystal Structure Of A. Fulgidus Lon Proteolytic Domain
pdb|1Z0G|E Chain E, Crystal Structure Of A. Fulgidus Lon Proteolytic Domain
pdb|1Z0G|F Chain F, Crystal Structure Of A. Fulgidus Lon Proteolytic Domain
pdb|1Z0T|A Chain A, Crystal Structure Of A. Fulgidus Lon Proteolytic Domain
pdb|1Z0T|B Chain B, Crystal Structure Of A. Fulgidus Lon Proteolytic Domain
pdb|1Z0T|C Chain C, Crystal Structure Of A. Fulgidus Lon Proteolytic Domain
pdb|1Z0T|D Chain D, Crystal Structure Of A. Fulgidus Lon Proteolytic Domain
pdb|1Z0T|E Chain E, Crystal Structure Of A. Fulgidus Lon Proteolytic Domain
pdb|1Z0T|F Chain F, Crystal Structure Of A. Fulgidus Lon Proteolytic Domain
pdb|1Z0V|A Chain A, Crystal Structure Of A. Fulgidus Lon Proteolytic Domain
pdb|1Z0V|B Chain B, Crystal Structure Of A. Fulgidus Lon Proteolytic Domain
pdb|1Z0V|C Chain C, Crystal Structure Of A. Fulgidus Lon Proteolytic Domain
pdb|1Z0V|D Chain D, Crystal Structure Of A. Fulgidus Lon Proteolytic Domain
pdb|1Z0V|E Chain E, Crystal Structure Of A. Fulgidus Lon Proteolytic Domain
pdb|1Z0V|F Chain F, Crystal Structure Of A. Fulgidus Lon Proteolytic Domain
Length = 205
Score = 25.4 bits (54), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 17/81 (20%)
Query: 16 DTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYGELVSIGGLNPDVNK 75
D++SI S AT+ ++ I G P V S T + GE++ +GG V +
Sbjct: 92 DSASI-SIATAVISAIEGIP-----------VDQSVAMTGSLSVKGEVLPVGG----VTQ 135
Query: 76 KLSAAISAILEKKLSVPKSRF 96
K+ AAI A L KK+ +PK
Sbjct: 136 KIEAAIQAGL-KKVIIPKDNI 155
>pdb|1Z0W|A Chain A, Crystal Structure Of A. Fulgidus Lon Proteolytic Domain At
1.2a Resolution
Length = 207
Score = 25.4 bits (54), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 17/81 (20%)
Query: 16 DTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYGELVSIGGLNPDVNK 75
D++SI S AT+ ++ I G P V S T + GE++ +GG V +
Sbjct: 94 DSASI-SIATAVISAIEGIP-----------VDQSVAMTGSLSVKGEVLPVGG----VTQ 137
Query: 76 KLSAAISAILEKKLSVPKSRF 96
K+ AAI A L KK+ +PK
Sbjct: 138 KIEAAIQAGL-KKVIIPKDNI 157
>pdb|1Z0B|A Chain A, Crystal Structure Of A. Fulgidus Lon Proteolytic Domain
E506a Mutant
Length = 207
Score = 25.4 bits (54), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 17/81 (20%)
Query: 16 DTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYGELVSIGGLNPDVNK 75
D++SI S AT+ ++ I G P V S T + GE++ +GG V +
Sbjct: 94 DSASI-SIATAVISAIEGIP-----------VDQSVAMTGSLSVKGEVLPVGG----VTQ 137
Query: 76 KLSAAISAILEKKLSVPKSRF 96
K+ AAI A L KK+ +PK
Sbjct: 138 KIEAAIQAGL-KKVIIPKDNI 157
>pdb|3GE6|A Chain A, Crystal Structure Of A Putative Nitroreductase In
Complex With Fmn (Exig_2970) From Exiguobacterium
Sibiricum 255-15 At 1.85 A Resolution
pdb|3GE6|B Chain B, Crystal Structure Of A Putative Nitroreductase In
Complex With Fmn (Exig_2970) From Exiguobacterium
Sibiricum 255-15 At 1.85 A Resolution
Length = 212
Score = 25.4 bits (54), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 5 NISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMI 41
N TNVK+ + + IL EAT +++ +P +++I
Sbjct: 22 NYDTNVKISKEEXTQILEEATLAPSSVNXQPWRFLVI 58
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.131 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,338,348
Number of Sequences: 62578
Number of extensions: 116803
Number of successful extensions: 425
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 389
Number of HSP's gapped (non-prelim): 42
length of query: 121
length of database: 14,973,337
effective HSP length: 83
effective length of query: 38
effective length of database: 9,779,363
effective search space: 371615794
effective search space used: 371615794
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 45 (21.9 bits)