BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033334
(121 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P81529|MIFH_TRISP Macrophage migration inhibitory factor homolog OS=Trichinella
spiralis PE=1 SV=2
Length = 114
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP ++TN+K V S LS ++ V NI+ KP +YV + + +SFGG+ PAA+
Sbjct: 1 MPIFTLNTNIKATDV-PSDFLSSTSALVGNILSKPGSYVAVHINTDQQLSFGGSTKPAAF 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKF 100
G L+SIGG+ P N+ SA + L KKL +PK+R +I F
Sbjct: 60 GTLMSIGGIEPSRNRDHSAKLFDHLNKKLGIPKNRMYIHF 99
>sp|P91850|MIFH_BRUMA Macrophage migration inhibitory factor homolog OS=Brugia malayi
GN=Bm1_28435 PE=3 SV=4
Length = 115
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP I TN+ + + +S+ L +A++ VA +GKPE+YV I + G M FGG+EDP A
Sbjct: 1 MPYFTIDTNIPQNSI-SSAFLKKASNVVAKALGKPESYVSIHVNGGQAMVFGGSEDPCAV 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKA 105
L SIG + P VN + + +L +L +PK+R +I+F D +A
Sbjct: 60 CVLKSIGCVGPKVNNSHAEKLYKLLADELKIPKNRCYIEFVDIEA 104
>sp|P81748|MIFH_TRITR Macrophage migration inhibitory factor homolog OS=Trichuris
trichiura PE=1 SV=2
Length = 114
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP STNV + + L + +A ++GKPE+YV + + G ++FGGT+ PA +
Sbjct: 1 MPIFTFSTNVPSENISVD-FLKSTSKLIAGMLGKPESYVAVHINGGQKITFGGTDAPAGF 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKA 105
G+L+S+GG+ + N+ SA + L L +P +R +I F D +
Sbjct: 60 GQLLSLGGVGGEKNRSHSAKLFKHLTDGLGIPGNRMYINFVDMRG 104
>sp|O44786|MIFH_WUCBA Macrophage migration inhibitory factor homolog OS=Wuchereria
bancrofti GN=MIF PE=3 SV=3
Length = 115
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP I TN D + +S+ L +A + V +GKPE+YV I + G PM FGG+EDP
Sbjct: 1 MPYFTIDTNKPQDSI-SSAFLKKAPNVVPKALGKPESYVSIHVNGGQPMVFGGSEDPCPV 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKA 105
L SIG + P VN + + +L +L +PK+R +I+ D +A
Sbjct: 60 CVLKSIGCVGPKVNNSHAEKLYKLLADELKIPKNRCYIESVDIEA 104
>sp|Q76BK2|MIF_XENLA Macrophage migration inhibitory factor OS=Xenopus laevis GN=mif
PE=1 SV=1
Length = 115
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP I TNV D V ++LS+ T +A GKP Y+ I + MSFG + DP A
Sbjct: 1 MPVFTIRTNVCRDSV-PDTLLSDLTKQLAKATGKPAEYIAIHIVPDQIMSFGDSTDPCAV 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKA 105
L SIG + NK + + IL K+L++P +R +I +YD A
Sbjct: 60 CSLCSIGKIGGPQNKSYTKLLCDILTKQLNIPANRVYINYYDLNA 104
>sp|Q02960|MIF_CHICK Macrophage migration inhibitory factor OS=Gallus gallus GN=MIF PE=2
SV=3
Length = 115
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP I TNV D V S+L E T +A GKP Y+ + + MSFGG+ DP A
Sbjct: 1 MPMFTIHTNVCKDAV-PDSLLGELTQQLAKATGKPAQYIAVHIVPDQMMSFGGSTDPCAL 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKA 105
L SIG + NK + + ++ K L V R +I ++D A
Sbjct: 60 CSLYSIGKIGGQQNKTYTKLLCDMIAKHLHVSADRVYINYFDINA 104
>sp|A9JSE7|MIF_XENTR Macrophage migration inhibitory factor OS=Xenopus tropicalis GN=mif
PE=3 SV=1
Length = 115
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP + TNV D + ++LS+ T +A GKP Y+ I + MSFG + DP A
Sbjct: 1 MPTFTVCTNVCRDSM-PDTLLSDLTKLLAKATGKPAEYIAIHIMPDQMMSFGDSTDPCAV 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYD 102
L SIG + NK S + L K++++P +R +I F+D
Sbjct: 60 CSLSSIGKIGGPQNKSYSKLLCDYLTKQMNIPANRVYINFHD 101
>sp|P34884|MIF_MOUSE Macrophage migration inhibitory factor OS=Mus musculus GN=Mif PE=1
SV=2
Length = 115
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP ++TNV V LSE T +A GKP Y+ + + M+F GT DP A
Sbjct: 1 MPMFIVNTNVPRASV-PEGFLSELTQQLAQATGKPAQYIAVHVVPDQLMTFSGTNDPCAL 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKA 105
L SIG + N+ S + +L +L + R +I +YD A
Sbjct: 60 CSLHSIGKIGGAQNRNYSKLLCGLLSDRLHISPDRVYINYYDMNA 104
>sp|P30904|MIF_RAT Macrophage migration inhibitory factor OS=Rattus norvegicus GN=Mif
PE=1 SV=4
Length = 115
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP ++TNV V LSE T +A GKP Y+ + + M+F GT DP A
Sbjct: 1 MPMFIVNTNVPRASV-PEGFLSELTQQLAQATGKPAQYIAVHVVPDQLMTFSGTSDPCAL 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKA 105
L SIG + N+ S + +L +L + R +I +YD A
Sbjct: 60 CSLHSIGKIGGAQNRNYSKLLCGLLSDRLHISPDRVYINYYDMNA 104
>sp|O55052|MIF_MERUN Macrophage migration inhibitory factor OS=Meriones unguiculatus
GN=MIF PE=3 SV=3
Length = 115
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP ++TNV V +LSE T +A GKP Y+ + + M+F G+ DP A
Sbjct: 1 MPMFIVNTNVPRSSV-PEGLLSELTQQLAQATGKPAQYIAVHVVPDQLMTFSGSSDPCAL 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKA 105
L SIG + N+ S + +L +L + R +I +YD A
Sbjct: 60 CSLHSIGKIGGAQNRTYSKLLCGLLADRLRISPDRIYINYYDMNA 104
>sp|Q6DN04|MIF_MACMU Macrophage migration inhibitory factor OS=Macaca mulatta GN=MIF
PE=3 SV=4
Length = 115
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP ++TNV V LSE T +A GKP Y+ + + M+FGG+ +P A
Sbjct: 1 MPMFIVNTNVPRASV-PDGFLSELTQQLAQATGKPPQYIAVHVVPDQLMAFGGSSEPCAL 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKA 105
L SIG + N+ S + +L ++L + R +I +YD A
Sbjct: 60 CSLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNA 104
>sp|Q4R549|MIF_MACFA Macrophage migration inhibitory factor OS=Macaca fascicularis
GN=MIF PE=3 SV=3
Length = 115
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP ++TNV V LSE T +A GKP Y+ + + M+FGG+ +P A
Sbjct: 1 MPMFIVNTNVPRASV-PDGFLSELTQQLAQATGKPPQYIAVHVVPDQLMAFGGSSEPCAL 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKA 105
L SIG + N+ S + +L ++L + R +I +YD A
Sbjct: 60 CSLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNA 104
>sp|P14174|MIF_HUMAN Macrophage migration inhibitory factor OS=Homo sapiens GN=MIF PE=1
SV=4
Length = 115
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP ++TNV V LSE T +A GKP Y+ + + M+FGG+ +P A
Sbjct: 1 MPMFIVNTNVPRASV-PDGFLSELTQQLAQATGKPPQYIAVHVVPDQLMAFGGSSEPCAL 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKA 105
L SIG + N+ S + +L ++L + R +I +YD A
Sbjct: 60 CSLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNA 104
>sp|P80928|MIF_PIG Macrophage migration inhibitory factor OS=Sus scrofa GN=MIF PE=1
SV=3
Length = 115
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP ++TNV V LSE T + +GKP Y+ + + M+FGG+ +P A
Sbjct: 1 MPMFVVNTNVPRASV-PDGFLSELTQQLVQAMGKPAQYIAVHVVPDQLMAFGGSSEPCAL 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKA 105
L SIG + N+ S + +L ++L + R +I +YD A
Sbjct: 60 CSLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRIYINYYDMNA 104
>sp|Q1ZZU7|MIF_SHEEP Macrophage migration inhibitory factor OS=Ovis aries GN=MIF PE=3
SV=1
Length = 115
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP ++TNV V +LSE T +A GKP Y+ + + M+FGG+ +P A
Sbjct: 1 MPMFVVNTNVPRASVP-DGLLSELTQQLAQATGKPAQYIAVHVVPDQLMTFGGSSEPCAL 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKA 105
L SIG + N+ S + +L ++L + R +I F D A
Sbjct: 60 CSLHSIGKIGGAQNRSYSKLLCGLLTERLRISPDRIYINFCDMNA 104
>sp|P80177|MIF_BOVIN Macrophage migration inhibitory factor OS=Bos taurus GN=MIF PE=1
SV=6
Length = 115
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP ++TNV V +LSE T +A GKP Y+ + + M+FGG+ +P A
Sbjct: 1 MPMFVVNTNVPRASVP-DGLLSELTQQLAQATGKPAQYIAVHVVPDQLMTFGGSSEPCAL 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKA 105
L SIG + N+ S + +L ++L + R +I F D A
Sbjct: 60 CSLHSIGKIGGAQNRSYSKLLCGLLTERLRISPDRIYINFCDMNA 104
>sp|Q18785|MIF2_CAEEL MIF-like protein mif-2 OS=Caenorhabditis elegans GN=mif-2 PE=2 SV=1
Length = 120
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP + ++TN+ + V + T +A +GKP + + + + G T DP
Sbjct: 1 MPMVRVATNLPNEKVPVDFEI-RLTDLLARSMGKPRERIAVEIAAGARLVHGATHDPVTV 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYD 102
+ SIG ++ + N + +AAI+ K+L +PK + I F+D
Sbjct: 60 ISIKSIGAVSAEDNIRNTAAITEFCGKELGLPKDKVVITFHD 101
>sp|P30046|DOPD_HUMAN D-dopachrome decarboxylase OS=Homo sapiens GN=DDT PE=1 SV=3
Length = 118
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP L + TN+ + V + + + A+I+GKP V + ++ + M+ G+ +P A
Sbjct: 1 MPFLELDTNLPANRVP-AGLEKRLCAAAASILGKPADRVNVTVRPGLAMALSGSTEPCAQ 59
Query: 61 GELVSIG--GLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKAHQ 107
+ SIG G D N+ SA L K+L++ + R I+F+ ++ Q
Sbjct: 60 LSISSIGVVGTAED-NRSHSAHFFEFLTKELALGQDRILIRFFPLESWQ 107
>sp|Q640C5|DOPDB_XENLA D-dopachrome decarboxylase-B OS=Xenopus laevis GN=ddt-b PE=3 SV=1
Length = 118
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 1 MPCLNISTNVKLDGV--DTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPA 58
MP + + TN++ V D + L AT+T I+GKP V + ++ V M GG+ P
Sbjct: 1 MPFVELDTNLQQQEVPQDLAEKLCSATAT---ILGKPRERVNVTVRTGVSMVVGGSSAPC 57
Query: 59 AYGELVSIGGL-NPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKAHQ 107
+ SIG + + NK+ SA L ++L + + R ++F + Q
Sbjct: 58 TQLIISSIGVVGTAEQNKEHSAKFFNFLTEQLGLAQDRILLRFVPLEPWQ 107
>sp|Q68FI3|DOPDA_XENLA D-dopachrome decarboxylase-A OS=Xenopus laevis GN=ddt-a PE=3 SV=1
Length = 118
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 1 MPCLNISTNVKLDGV--DTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPA 58
MP + + TN+ V D + L AT+T I+GKP V + ++ V M GG+ P
Sbjct: 1 MPFVELETNLPSQNVPQDLAEKLCSATAT---ILGKPRERVNVTVRTGVSMVVGGSSAPC 57
Query: 59 AYGELVSIGGL-NPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKAHQ 107
+ SIG + + NK+ SA L ++L + + R ++F + Q
Sbjct: 58 TQLFISSIGVVGTAEQNKEHSAKFFNFLTEQLGLAQDRILLRFVPIEPWQ 107
>sp|Q5ZMG0|DOPD_CHICK D-dopachrome decarboxylase OS=Gallus gallus GN=DDT PE=3 SV=1
Length = 118
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP + + TN+ + + L +T A I+GKP V + ++ +PM G+ +P A
Sbjct: 1 MPFVELETNLPAERLPPGLPLKLCEAT-ATILGKPAERVNVTVRSGMPMVLAGSAEPCAQ 59
Query: 61 GELVSIGGL-NPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKAHQ 107
+ SIG + + N+ SA L +L + R I+FY + Q
Sbjct: 60 LLVSSIGVVGSAQQNQGHSARFFDFLTTELGLGPERIVIRFYPLEPWQ 107
>sp|O35215|DOPD_MOUSE D-dopachrome decarboxylase OS=Mus musculus GN=Ddt PE=1 SV=3
Length = 118
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP + + TN+ + + + + + A I+ KPE V + ++ + + + +P A+
Sbjct: 1 MPFVELETNLPASRIP-AGLENRLCAATATILDKPEDRVSVTIRPGMTLLMNKSTEPCAH 59
Query: 61 GELVSIGGL-NPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKAHQ 107
+ SIG + + N+ SA+ L ++LS+ + R I+F+ +A Q
Sbjct: 60 LLVSSIGVVGTAEQNRTHSASFFKFLTEELSLDQDRIVIRFFPLEAWQ 107
>sp|A6NHG4|DDTL_HUMAN D-dopachrome decarboxylase-like protein OS=Homo sapiens GN=DDTL
PE=2 SV=1
Length = 134
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP L + TN+ + V + + + A+I+GKP V + ++ + M+ G+ +P A
Sbjct: 1 MPFLELDTNLPANRVP-AGLEKRLCAAAASILGKPADRVNVTVRPGLAMALSGSTEPCAQ 59
Query: 61 GELVSIG--GLNPDVNKKLSAAISAILEKKLSVPKSRF 96
+ SIG G D N+ SA L K+L++ + RF
Sbjct: 60 LSISSIGVVGTAED-NRSHSAHFFEFLTKELALGQDRF 96
>sp|P80254|DOPD_RAT D-dopachrome decarboxylase OS=Rattus norvegicus GN=Ddt PE=1 SV=3
Length = 118
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP + + TN+ + + + + + A I+ KPE V + ++ + + + +P A+
Sbjct: 1 MPFVELETNLPASRIP-AGLENRLCAATATILDKPEDRVSVTIRPGMTLLMNKSTEPCAH 59
Query: 61 GELVSIGGL-NPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKAHQ 107
+ SIG + + N+ S++ L ++LS+ + R I+F+ + Q
Sbjct: 60 LLISSIGVVGTAEQNRSHSSSFFKFLTEELSLDQDRIIIRFFPLEPWQ 107
>sp|A5PK65|DOPD_BOVIN D-dopachrome decarboxylase OS=Bos taurus GN=DDT PE=3 SV=1
Length = 118
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP + + T++ G + + + A I+ KPE V + ++ + M G+ +P+A
Sbjct: 1 MPFVELDTSLP-AGRVPAGLEKRLCAATAAILSKPEDRVNVTVRSGLAMVVNGSAEPSAQ 59
Query: 61 GELVSIGGL-NPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKAHQ 107
+ SIG + + N+ SA L K+L + + R I+F+ + Q
Sbjct: 60 LLVSSIGVVGTAEENRGHSARFFEFLTKELDLAEDRIMIRFFPLERWQ 107
>sp|Q28J83|DOPD_XENTR D-dopachrome decarboxylase OS=Xenopus tropicalis GN=ddt PE=3 SV=1
Length = 118
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Query: 1 MPCLNISTNVKLDGV--DTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPA 58
MP + + TN+ V D + L AT+T I+ KP V + ++ V M GG+ P
Sbjct: 1 MPFVELDTNLPPQQVPQDLAEKLCSATAT---ILSKPRERVNVTVRTGVSMVVGGSCAPC 57
Query: 59 AYGELVSIGGL-NPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKAHQ 107
+ SIG + + NK+ SA L + + + + R ++F + Q
Sbjct: 58 TQLLVSSIGVVGTAEQNKEHSAKFFQFLTENMGLEQDRILLRFVPLEPWQ 107
>sp|P90835|MIF3_CAEEL MIF-like protein mif-3 OS=Caenorhabditis elegans GN=mif-3 PE=3 SV=1
Length = 146
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 1 MPCLNISTNVKL--DGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPA 58
MP + + TNVK DG + + +A ++ +PE+ + + L + M+ G DP
Sbjct: 1 MPVIKVQTNVKKVSDGFEVRLAIH-----MAKVMKRPESQIFVSLDMNSRMTRGQLTDPL 55
Query: 59 AYGELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKF 100
A ++ S L P + ++ + A+ ++L++ I +
Sbjct: 56 AVLDVTSSTVLTPILTEEYTVALCEFFSQELALDSDAVLINY 97
>sp|A5A752|EDN3_PIG Endothelin-3 OS=Sus scrofa GN=EDN3 PE=2 SV=1
Length = 204
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 36 EAYVMIVLKGSVPMSFGGTEDPAAYGELVSIGG 68
E M+ +G P S G ++P +GEL + GG
Sbjct: 42 ETMAMVATRGPSPRSSGQEQEPGPFGELAAKGG 74
>sp|Q8MJ06|RP1_PAPHA Oxygen-regulated protein 1 OS=Papio hamadryas GN=RP1 PE=2 SV=1
Length = 2152
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 62 ELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKAHQSRE 110
EL+ I G N K+ + I I+ K+L+ P S F YD+K ++ +E
Sbjct: 1502 ELIDISGKNVMEEKRRNGIIYEIISKRLATPPSLVFC--YDSKQNREKE 1548
>sp|Q5UQD2|PNKP_MIMIV Putative bifunctional polynucleotide phosphatase/kinase
OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L469 PE=3
SV=1
Length = 421
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 5 NISTNVKLDGVDTSSILSEATST-VANIIGKPEAYVMIVLKG 45
N+ TN KL GV+ + I+ E +T + N KP MIV+ G
Sbjct: 224 NLKTNYKLSGVNPTEIIDEIENTKLVNYKFKPRKKEMIVMIG 265
>sp|A5UCM9|PURR_HAEIE HTH-type transcriptional repressor PurR OS=Haemophilus influenzae
(strain PittEE) GN=purR PE=3 SV=1
Length = 336
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 79 AAISAILEKKLSVPKSRFFIKFYDTKAHQSREHAQCLHAVHQ 120
AISA+ EK L VP+ I + D H SR +A L +HQ
Sbjct: 251 GAISALTEKGLRVPEDMSIIGYDDI--HASRFYAPPLTTIHQ 290
>sp|Q4QL70|PURR_HAEI8 HTH-type transcriptional repressor PurR OS=Haemophilus influenzae
(strain 86-028NP) GN=purR PE=3 SV=1
Length = 336
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 79 AAISAILEKKLSVPKSRFFIKFYDTKAHQSREHAQCLHAVHQ 120
AISA+ EK L VP+ I + D H SR +A L +HQ
Sbjct: 251 GAISALTEKGLRVPEDMSIIGYDDI--HASRFYAPPLTTIHQ 290
>sp|P46456|PURR_HAEIN HTH-type transcriptional repressor PurR OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=purR PE=3
SV=2
Length = 336
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 79 AAISAILEKKLSVPKSRFFIKFYDTKAHQSREHAQCLHAVHQ 120
AISA+ EK L VP+ I + D H SR +A L +HQ
Sbjct: 251 GAISALTEKGLRVPEDMSIIGYDDI--HASRFYAPPLTTIHQ 290
>sp|A9BXL3|CH60_DELAS 60 kDa chaperonin OS=Delftia acidovorans (strain DSM 14801 / SPH-1)
GN=groL PE=3 SV=1
Length = 547
Score = 29.3 bits (64), Expect = 7.3, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 28 VANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYGELVSIGGLNP 71
VAN G+P V VL GS F D YG+++ +G L+P
Sbjct: 455 VANAGGEPSVVVNAVLNGSGNYGFNAAND--TYGDMLEMGILDP 496
>sp|A5UIZ0|PURR_HAEIG HTH-type transcriptional repressor PurR OS=Haemophilus influenzae
(strain PittGG) GN=purR PE=3 SV=1
Length = 336
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 80 AISAILEKKLSVPKSRFFIKFYDTKAHQSREHAQCLHAVHQ 120
AISA+ EK L VP+ I + D H SR +A L +HQ
Sbjct: 252 AISALTEKCLRVPEDMSIIGYDDI--HASRFYAPPLTTIHQ 290
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,952,554
Number of Sequences: 539616
Number of extensions: 1501146
Number of successful extensions: 4682
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 4656
Number of HSP's gapped (non-prelim): 43
length of query: 121
length of database: 191,569,459
effective HSP length: 88
effective length of query: 33
effective length of database: 144,083,251
effective search space: 4754747283
effective search space used: 4754747283
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)