Query 033339
Match_columns 121
No_of_seqs 115 out of 1922
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 21:12:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033339.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033339hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ghd_A A cystathionine beta-sy 99.3 1.3E-11 4.4E-16 74.8 7.6 46 71-119 2-47 (70)
2 4esy_A CBS domain containing m 99.2 5.1E-12 1.7E-16 87.1 4.4 58 53-119 17-74 (170)
3 4esy_A CBS domain containing m 99.2 2.3E-11 8E-16 83.8 5.5 58 53-120 104-161 (170)
4 3k2v_A Putative D-arabinose 5- 99.2 5.4E-11 1.8E-15 80.1 6.6 58 54-120 28-87 (149)
5 3sl7_A CBS domain-containing p 99.2 7.8E-12 2.7E-16 86.0 1.9 59 53-120 97-155 (180)
6 3fio_A A cystathionine beta-sy 99.1 3.2E-10 1.1E-14 67.1 7.7 46 71-119 2-47 (70)
7 4gqw_A CBS domain-containing p 99.1 2.1E-10 7.2E-15 76.5 7.2 59 53-120 84-142 (152)
8 3nqr_A Magnesium and cobalt ef 99.1 3.1E-10 1E-14 74.4 7.3 59 52-120 67-125 (127)
9 3hf7_A Uncharacterized CBS-dom 99.1 2.3E-10 8E-15 75.6 6.5 61 54-120 2-62 (130)
10 3i8n_A Uncharacterized protein 99.1 3.9E-10 1.3E-14 74.2 7.2 58 53-120 71-128 (130)
11 3kpb_A Uncharacterized protein 99.1 2.8E-10 9.5E-15 73.6 6.3 58 54-120 1-58 (122)
12 3hf7_A Uncharacterized CBS-dom 99.1 4.8E-10 1.7E-14 74.0 7.2 58 53-120 69-126 (130)
13 3lv9_A Putative transporter; C 99.1 4.1E-10 1.4E-14 75.5 6.9 58 53-120 87-144 (148)
14 3k6e_A CBS domain protein; str 99.1 2.3E-10 8E-15 78.4 5.7 59 54-119 15-73 (156)
15 3oco_A Hemolysin-like protein 99.1 4.1E-10 1.4E-14 76.1 6.9 58 53-120 85-142 (153)
16 3kpb_A Uncharacterized protein 99.1 2.6E-10 8.8E-15 73.8 5.6 58 54-120 62-119 (122)
17 4fry_A Putative signal-transdu 99.0 4.8E-10 1.6E-14 75.8 7.1 59 52-120 76-134 (157)
18 3fv6_A YQZB protein; CBS domai 99.0 1.8E-10 6.2E-15 78.3 5.0 62 52-120 79-143 (159)
19 3l2b_A Probable manganase-depe 99.0 2.7E-10 9.2E-15 82.6 6.0 59 53-120 6-64 (245)
20 3jtf_A Magnesium and cobalt ef 99.0 4.6E-10 1.6E-14 73.8 6.6 58 53-120 68-125 (129)
21 3lv9_A Putative transporter; C 99.0 3E-10 1E-14 76.2 5.8 61 52-119 21-82 (148)
22 2d4z_A Chloride channel protei 99.0 2.5E-10 8.7E-15 84.4 5.9 60 53-119 12-71 (250)
23 3lhh_A CBS domain protein; str 99.0 5.7E-10 1.9E-14 77.1 7.2 58 53-120 106-163 (172)
24 1pbj_A Hypothetical protein; s 99.0 6.7E-10 2.3E-14 71.9 7.2 59 52-120 63-121 (125)
25 2nyc_A Nuclear protein SNF4; b 99.0 1E-09 3.5E-14 72.5 8.1 65 53-120 76-140 (144)
26 3jtf_A Magnesium and cobalt ef 99.0 3.4E-10 1.2E-14 74.5 5.7 60 53-119 4-64 (129)
27 3i8n_A Uncharacterized protein 99.0 1.5E-10 5.2E-15 76.2 3.9 62 52-120 4-66 (130)
28 3gby_A Uncharacterized protein 99.0 1.6E-10 5.4E-15 75.8 3.9 59 54-121 68-126 (128)
29 3lfr_A Putative metal ION tran 99.0 3.6E-10 1.2E-14 75.1 5.4 61 53-120 2-63 (136)
30 1y5h_A Hypothetical protein RV 99.0 6.7E-10 2.3E-14 72.9 6.5 58 53-120 73-130 (133)
31 3nqr_A Magnesium and cobalt ef 99.0 3.8E-10 1.3E-14 74.0 5.2 60 53-119 2-62 (127)
32 3lfr_A Putative metal ION tran 99.0 3.6E-10 1.2E-14 75.1 5.1 58 53-120 69-126 (136)
33 2uv4_A 5'-AMP-activated protei 99.0 9.1E-10 3.1E-14 74.2 7.1 65 53-120 86-150 (152)
34 3kxr_A Magnesium transporter, 99.0 4.2E-10 1.4E-14 80.5 5.6 59 53-120 115-173 (205)
35 3fhm_A Uncharacterized protein 99.0 1.7E-09 5.7E-14 73.9 8.2 62 52-119 22-83 (165)
36 3lqn_A CBS domain protein; csg 99.0 9.3E-10 3.2E-14 73.7 6.7 60 53-119 14-73 (150)
37 2yzi_A Hypothetical protein PH 99.0 9.7E-10 3.3E-14 72.5 6.6 57 52-117 5-61 (138)
38 2ef7_A Hypothetical protein ST 99.0 6.4E-10 2.2E-14 73.0 5.7 59 53-120 66-124 (133)
39 2rih_A Conserved protein with 99.0 1E-09 3.4E-14 72.9 6.7 58 53-119 4-63 (141)
40 1yav_A Hypothetical protein BS 99.0 9.8E-10 3.3E-14 74.5 6.7 61 52-119 12-72 (159)
41 2o16_A Acetoin utilization pro 99.0 1.4E-09 4.9E-14 74.0 7.6 59 52-120 76-134 (160)
42 3k6e_A CBS domain protein; str 99.0 3.5E-10 1.2E-14 77.5 4.5 56 53-119 85-140 (156)
43 2p9m_A Hypothetical protein MJ 99.0 8.1E-10 2.8E-14 72.8 6.1 60 52-120 71-135 (138)
44 3gby_A Uncharacterized protein 99.0 4.6E-10 1.6E-14 73.6 4.9 57 53-119 4-60 (128)
45 2pfi_A Chloride channel protei 99.0 1.5E-09 5.2E-14 73.3 7.3 59 52-119 11-71 (164)
46 3l2b_A Probable manganase-depe 99.0 6.4E-10 2.2E-14 80.6 5.7 58 53-119 184-242 (245)
47 2yzq_A Putative uncharacterize 99.0 4.9E-10 1.7E-14 81.9 5.1 59 53-120 220-278 (282)
48 2rc3_A CBS domain; in SITU pro 99.0 1E-09 3.6E-14 72.2 5.9 59 52-120 72-130 (135)
49 2o16_A Acetoin utilization pro 99.0 9.3E-10 3.2E-14 75.0 5.8 58 53-119 4-61 (160)
50 3lhh_A CBS domain protein; str 99.0 8.6E-10 2.9E-14 76.2 5.6 62 52-120 40-102 (172)
51 3fhm_A Uncharacterized protein 99.0 9.4E-10 3.2E-14 75.2 5.7 58 53-120 92-149 (165)
52 2rih_A Conserved protein with 99.0 9.1E-10 3.1E-14 73.1 5.5 57 53-119 70-126 (141)
53 3k2v_A Putative D-arabinose 5- 98.9 1.1E-09 3.8E-14 73.6 5.7 56 52-117 93-148 (149)
54 1o50_A CBS domain-containing p 98.9 1.5E-09 5E-14 73.6 6.1 59 52-120 94-152 (157)
55 3lqn_A CBS domain protein; csg 98.9 1.1E-09 3.6E-14 73.4 5.3 57 53-120 86-142 (150)
56 1pbj_A Hypothetical protein; s 98.9 3.1E-09 1.1E-13 68.7 7.3 55 55-119 2-56 (125)
57 3ctu_A CBS domain protein; str 98.9 1.5E-09 5.1E-14 73.3 5.9 60 53-119 14-73 (156)
58 1pvm_A Conserved hypothetical 98.9 2E-09 6.9E-14 74.8 6.6 59 52-119 7-65 (184)
59 2p9m_A Hypothetical protein MJ 98.9 2E-09 6.7E-14 70.9 6.0 58 53-119 7-65 (138)
60 3fv6_A YQZB protein; CBS domai 98.9 2.1E-09 7.3E-14 73.0 6.3 57 53-119 16-72 (159)
61 3oco_A Hemolysin-like protein 98.9 1.6E-09 5.4E-14 73.2 5.6 61 52-119 18-80 (153)
62 2yzi_A Hypothetical protein PH 98.9 2.3E-09 7.8E-14 70.7 6.0 58 53-120 71-128 (138)
63 2emq_A Hypothetical conserved 98.9 1.3E-09 4.4E-14 73.4 4.8 61 52-119 9-69 (157)
64 3ocm_A Putative membrane prote 98.9 1.5E-09 5E-14 75.6 5.2 61 52-119 34-95 (173)
65 3t4n_C Nuclear protein SNF4; C 98.9 6.6E-09 2.3E-13 77.5 9.0 65 53-120 255-319 (323)
66 3kh5_A Protein MJ1225; AMPK, A 98.9 1.8E-09 6.2E-14 78.5 5.8 58 53-119 222-279 (280)
67 2ef7_A Hypothetical protein ST 98.9 3.7E-09 1.3E-13 69.3 6.8 57 53-119 3-59 (133)
68 1vr9_A CBS domain protein/ACT 98.9 2.1E-09 7.3E-14 76.8 6.0 58 53-119 71-128 (213)
69 2rc3_A CBS domain; in SITU pro 98.9 6.8E-09 2.3E-13 68.3 7.9 58 54-118 6-63 (135)
70 3oi8_A Uncharacterized protein 98.9 9.8E-10 3.4E-14 74.6 3.8 61 52-119 36-97 (156)
71 1y5h_A Hypothetical protein RV 98.9 1.6E-09 5.5E-14 71.0 4.7 56 53-117 7-62 (133)
72 3oi8_A Uncharacterized protein 98.9 3.5E-09 1.2E-13 71.9 6.5 54 53-116 102-155 (156)
73 1o50_A CBS domain-containing p 98.9 3.4E-09 1.2E-13 71.7 6.2 59 51-119 13-72 (157)
74 3sl7_A CBS domain-containing p 98.9 2.9E-09 1E-13 72.9 5.9 58 53-117 3-60 (180)
75 3ddj_A CBS domain-containing p 98.9 3.8E-09 1.3E-13 78.0 6.6 59 53-120 226-284 (296)
76 4gqw_A CBS domain-containing p 98.9 2.7E-09 9.1E-14 71.0 5.2 58 53-117 4-61 (152)
77 2oux_A Magnesium transporter; 98.9 4.5E-09 1.5E-13 78.5 6.9 59 53-120 200-258 (286)
78 2emq_A Hypothetical conserved 98.9 3.7E-09 1.3E-13 71.1 5.7 57 53-120 82-138 (157)
79 2j9l_A Chloride channel protei 98.8 4.1E-09 1.4E-13 72.6 5.9 58 53-120 107-164 (185)
80 1yav_A Hypothetical protein BS 98.8 5.5E-09 1.9E-13 70.7 6.4 58 52-120 84-141 (159)
81 3ctu_A CBS domain protein; str 98.8 2E-09 6.8E-14 72.6 4.1 57 53-120 85-141 (156)
82 1pvm_A Conserved hypothetical 98.8 2.8E-09 9.7E-14 74.1 4.9 58 53-119 74-131 (184)
83 3ocm_A Putative membrane prote 98.8 5.2E-09 1.8E-13 72.7 6.3 49 70-120 108-156 (173)
84 2nyc_A Nuclear protein SNF4; b 98.8 4.3E-09 1.5E-13 69.5 5.6 58 53-119 7-67 (144)
85 4fry_A Putative signal-transdu 98.8 1.3E-08 4.4E-13 68.6 7.6 62 54-119 7-68 (157)
86 2yvy_A MGTE, Mg2+ transporter 98.8 3.2E-09 1.1E-13 78.7 4.9 59 53-120 198-256 (278)
87 2qrd_G Protein C1556.08C; AMPK 98.8 1.8E-08 6.1E-13 75.5 8.5 65 53-120 250-314 (334)
88 2pfi_A Chloride channel protei 98.8 2.3E-08 7.7E-13 67.4 7.7 63 53-120 83-146 (164)
89 2j9l_A Chloride channel protei 98.8 1.4E-08 4.9E-13 69.8 6.5 62 53-119 10-75 (185)
90 2v8q_E 5'-AMP-activated protei 98.7 4.9E-08 1.7E-12 73.1 9.2 65 53-120 258-322 (330)
91 2d4z_A Chloride channel protei 98.7 1.4E-08 4.7E-13 75.1 5.7 49 69-120 197-245 (250)
92 3kh5_A Protein MJ1225; AMPK, A 98.7 1.8E-08 6.3E-13 73.1 6.1 58 53-119 83-140 (280)
93 3pc3_A CG1753, isoform A; CBS, 98.7 1.7E-08 5.9E-13 81.2 6.2 71 42-120 361-443 (527)
94 2uv4_A 5'-AMP-activated protei 98.7 3.4E-08 1.2E-12 66.4 6.6 48 71-120 31-78 (152)
95 2zy9_A Mg2+ transporter MGTE; 98.7 2.2E-08 7.4E-13 79.9 6.1 59 53-120 218-276 (473)
96 3ddj_A CBS domain-containing p 98.7 4E-08 1.4E-12 72.4 6.8 59 53-120 155-213 (296)
97 3t4n_C Nuclear protein SNF4; C 98.7 2.7E-08 9.2E-13 74.2 5.4 59 53-120 186-247 (323)
98 3kxr_A Magnesium transporter, 98.6 5E-08 1.7E-12 69.6 6.3 60 50-118 50-112 (205)
99 2oux_A Magnesium transporter; 98.6 5.9E-08 2E-12 72.4 6.5 60 50-118 133-197 (286)
100 2qrd_G Protein C1556.08C; AMPK 98.6 7.3E-08 2.5E-12 72.1 5.9 60 53-119 21-81 (334)
101 2v8q_E 5'-AMP-activated protei 98.6 1.3E-07 4.4E-12 70.8 7.1 60 53-119 34-94 (330)
102 1vr9_A CBS domain protein/ACT 98.6 3.9E-08 1.3E-12 70.2 4.0 56 54-118 13-68 (213)
103 3org_A CMCLC; transporter, tra 98.6 1.8E-08 6.2E-13 82.8 2.4 55 56-120 570-624 (632)
104 3org_A CMCLC; transporter, tra 98.5 3.8E-08 1.3E-12 80.9 3.5 61 52-119 451-512 (632)
105 2yzq_A Putative uncharacterize 98.5 1E-07 3.5E-12 69.4 5.4 58 53-119 59-117 (282)
106 3usb_A Inosine-5'-monophosphat 98.5 2E-07 6.7E-12 75.2 7.0 61 52-120 173-233 (511)
107 2yvy_A MGTE, Mg2+ transporter 98.5 2.1E-07 7.3E-12 68.8 6.2 59 51-118 132-195 (278)
108 3pc3_A CG1753, isoform A; CBS, 98.4 2.2E-07 7.4E-12 74.8 5.8 57 53-120 450-510 (527)
109 1zfj_A Inosine monophosphate d 98.4 3.5E-07 1.2E-11 72.8 5.6 60 53-120 151-210 (491)
110 1me8_A Inosine-5'-monophosphat 98.3 7.4E-08 2.5E-12 77.4 0.0 60 53-119 160-219 (503)
111 3usb_A Inosine-5'-monophosphat 98.3 1.3E-06 4.5E-11 70.3 6.8 82 32-116 69-168 (511)
112 4af0_A Inosine-5'-monophosphat 98.3 1.1E-07 3.8E-12 77.0 0.0 57 53-118 199-255 (556)
113 1vrd_A Inosine-5'-monophosphat 98.3 1.3E-07 4.4E-12 75.5 0.2 60 54-120 155-214 (494)
114 4fxs_A Inosine-5'-monophosphat 98.2 1.4E-06 4.9E-11 69.9 5.4 48 67-116 95-142 (496)
115 4avf_A Inosine-5'-monophosphat 98.2 2E-07 6.8E-12 74.8 0.0 60 53-119 146-205 (490)
116 2zy9_A Mg2+ transporter MGTE; 98.2 1.8E-06 6.2E-11 68.8 5.4 60 50-118 151-215 (473)
117 2cu0_A Inosine-5'-monophosphat 98.1 3.7E-07 1.3E-11 72.9 0.0 57 54-119 150-206 (486)
118 4fxs_A Inosine-5'-monophosphat 98.1 3E-07 1E-11 73.8 -0.6 58 53-118 148-206 (496)
119 4af0_A Inosine-5'-monophosphat 98.1 5.9E-07 2E-11 72.7 0.8 86 31-116 93-194 (556)
120 1vrd_A Inosine-5'-monophosphat 98.0 5.1E-07 1.7E-11 72.0 -0.5 46 70-117 104-149 (494)
121 1zfj_A Inosine monophosphate d 98.0 1.1E-05 3.8E-10 64.1 5.9 49 69-117 98-146 (491)
122 1jcn_A Inosine monophosphate d 97.9 1.6E-07 5.5E-12 75.4 -5.0 58 53-119 172-231 (514)
123 1me8_A Inosine-5'-monophosphat 97.9 1.9E-06 6.3E-11 69.2 0.0 49 67-117 103-154 (503)
124 4avf_A Inosine-5'-monophosphat 97.7 5.7E-06 2E-10 66.3 0.0 47 67-116 94-140 (490)
125 1jcn_A Inosine monophosphate d 97.6 5.4E-06 1.9E-10 66.5 -1.7 49 67-117 114-165 (514)
126 2cu0_A Inosine-5'-monophosphat 97.1 6.8E-05 2.3E-09 59.8 0.0 47 67-116 99-145 (486)
127 1tif_A IF3-N, translation init 64.2 13 0.00046 22.2 4.4 26 91-118 12-37 (78)
128 1svj_A Potassium-transporting 45.4 20 0.00067 23.9 3.3 35 79-116 120-154 (156)
129 1p0z_A Sensor kinase CITA; tra 45.0 18 0.00061 22.7 2.9 18 94-113 105-122 (131)
130 3by8_A Sensor protein DCUS; hi 44.2 18 0.00062 23.1 2.9 18 94-113 110-127 (142)
131 3tjo_A Serine protease HTRA1; 43.1 14 0.00049 25.8 2.4 20 91-112 187-206 (231)
132 3k2t_A LMO2511 protein; lister 42.7 39 0.0013 18.8 3.7 24 76-99 11-34 (57)
133 3lgi_A Protease DEGS; stress-s 40.6 16 0.00054 25.6 2.3 22 89-112 172-193 (237)
134 2as9_A Serine protease; trypsi 40.3 16 0.00055 24.9 2.3 21 90-112 155-175 (210)
135 3ka5_A Ribosome-associated pro 39.9 50 0.0017 18.9 4.0 24 76-99 11-34 (65)
136 3k6y_A Serine protease, possib 39.2 18 0.00062 25.1 2.4 21 90-112 180-200 (237)
137 2w7s_A Serine protease SPLA; h 38.9 19 0.00065 24.1 2.4 22 90-113 151-172 (200)
138 3fan_A Non-structural protein; 37.5 18 0.00062 25.8 2.2 24 89-114 123-146 (213)
139 2w5e_A Putative serine proteas 37.2 21 0.00073 23.8 2.4 23 88-112 122-144 (163)
140 3sti_A Protease DEGQ; serine p 36.9 21 0.0007 25.5 2.4 21 90-112 184-204 (245)
141 2vid_A Serine protease SPLB; h 36.0 22 0.00077 23.6 2.4 21 91-113 155-175 (204)
142 3lyv_A Ribosome-associated fac 35.7 53 0.0018 18.9 3.7 24 76-99 12-35 (66)
143 3r8s_H 50S ribosomal protein L 35.3 35 0.0012 22.7 3.2 23 98-120 82-104 (149)
144 1qtf_A Exfoliative toxin B; se 34.7 24 0.00082 24.7 2.5 20 91-112 184-203 (246)
145 1agj_A Epidermolytic toxin A; 33.3 27 0.00091 24.2 2.5 20 91-112 193-212 (242)
146 1h75_A Glutaredoxin-like prote 32.9 20 0.00068 20.0 1.5 46 71-119 28-73 (81)
147 1r7h_A NRDH-redoxin; thioredox 32.4 36 0.0012 18.3 2.6 34 84-119 40-73 (75)
148 1l1j_A Heat shock protease HTR 29.5 30 0.001 24.3 2.3 21 90-112 180-200 (239)
149 3num_A Serine protease HTRA1; 29.1 33 0.0011 25.2 2.5 20 91-112 170-189 (332)
150 3qo6_A Protease DO-like 1, chl 26.4 38 0.0013 25.2 2.4 21 90-112 177-197 (348)
151 1lcy_A HTRA2 serine protease; 26.2 40 0.0014 24.7 2.5 21 90-112 170-190 (325)
152 2fb5_A Hypothetical membrane s 25.7 65 0.0022 22.7 3.4 27 73-99 69-99 (205)
153 1te0_A Protease DEGS; two doma 25.2 42 0.0014 24.5 2.5 20 91-112 163-182 (318)
154 3dba_A CONE CGMP-specific 3',5 25.1 58 0.002 21.1 3.0 20 90-112 124-143 (180)
155 3e0y_A Conserved domain protei 24.9 54 0.0019 20.3 2.7 19 91-112 119-137 (181)
156 1div_A Ribosomal protein L9; r 24.8 41 0.0014 22.4 2.1 20 101-120 84-103 (149)
157 1y8t_A Hypothetical protein RV 24.7 44 0.0015 24.3 2.5 21 90-112 166-186 (324)
158 2o8l_A V8 protease, taphylococ 24.4 45 0.0015 23.8 2.4 21 90-112 166-186 (274)
159 3trc_A Phosphoenolpyruvate-pro 24.3 64 0.0022 19.8 3.0 16 94-112 117-132 (171)
160 3ci6_A Phosphoenolpyruvate-pro 24.0 66 0.0023 19.4 3.0 17 93-112 118-134 (171)
161 2e4s_A CAMP and CAMP-inhibited 23.8 65 0.0022 20.3 3.0 17 93-112 130-146 (189)
162 2lrn_A Thiol:disulfide interch 23.4 1.3E+02 0.0046 18.4 5.5 35 83-119 101-136 (152)
163 3stj_A Protease DEGQ; serine p 23.2 47 0.0016 24.8 2.4 21 90-112 184-204 (345)
164 2w3g_A DOSS, two component sen 23.1 72 0.0024 19.1 3.0 17 93-112 99-115 (153)
165 2qkp_A Uncharacterized protein 22.8 49 0.0017 21.3 2.2 18 92-111 108-125 (151)
166 3oov_A Methyl-accepting chemot 22.6 73 0.0025 19.5 3.0 20 91-113 114-133 (169)
167 3ksh_A Putative uncharacterize 22.4 71 0.0024 21.2 3.0 17 93-112 116-132 (160)
168 3mmh_A FRMSR, methionine-R-sul 22.1 72 0.0025 21.1 3.0 17 93-112 117-133 (167)
169 1wcz_A Glutamyl endopeptidase; 22.1 53 0.0018 23.3 2.4 20 91-112 167-186 (268)
170 3rfb_A Putative uncharacterize 21.8 73 0.0025 21.4 3.0 18 93-113 117-134 (171)
171 3ic4_A Glutaredoxin (GRX-1); s 21.3 57 0.002 18.5 2.1 34 85-120 58-91 (92)
172 2kmv_A Copper-transporting ATP 20.4 94 0.0032 21.0 3.3 30 82-114 155-184 (185)
173 3hcy_A Putative two-component 20.4 74 0.0025 19.3 2.7 24 86-112 84-110 (151)
No 1
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.29 E-value=1.3e-11 Score=74.82 Aligned_cols=46 Identities=26% Similarity=0.448 Sum_probs=43.3
Q ss_pred eEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 71 WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 71 ~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
+++++|++++.+|+++|.+++++++||++ +|+++||||.+|+++.+
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d---~~~lvGIvT~~Di~~~~ 47 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME---GDEILGVVTERDILDKV 47 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE---TTEEEEEEEHHHHHHHT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE---CCEEEEEEEHHHHHHHH
Confidence 78999999999999999999999999997 68999999999998764
No 2
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.24 E-value=5.1e-12 Score=87.15 Aligned_cols=58 Identities=31% Similarity=0.484 Sum_probs=53.7
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
..+|+|+|+++ ++++.+++++.+|++.|.+++++++||+| ++|+++|+||.+|+++++
T Consensus 17 ~~~V~diM~~~-------v~~v~~~~tl~~a~~~m~~~~~~~~pVvd--~~g~lvGiit~~Dll~~~ 74 (170)
T 4esy_A 17 QVPIRDILTSP-------VVTVREDDTLDAVAKTMLEHQIGCAPVVD--QNGHLVGIITESDFLRGS 74 (170)
T ss_dssp TSBGGGGCCSC-------CCCEETTSBHHHHHHHHHHTTCSEEEEEC--TTSCEEEEEEGGGGGGGT
T ss_pred CCCHHHhcCCC-------CcEECCcCcHHHHHHHHHHcCCeEEEEEc--CCccEEEEEEHHHHHHHH
Confidence 57899999876 89999999999999999999999999999 899999999999998653
No 3
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.18 E-value=2.3e-11 Score=83.78 Aligned_cols=58 Identities=22% Similarity=0.332 Sum_probs=53.3
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..++.++|+++ ++++++++++.+|+++|.+++++.+||++ +|+++||||.+|+++++.
T Consensus 104 ~~~v~~im~~~-------~~tv~~~~~l~~a~~~m~~~~~~~lpVvd---~g~lvGivt~~Dil~~l~ 161 (170)
T 4esy_A 104 KLTASAVMTQP-------VVTAAPEDSVGSIADQMRRHGIHRIPVVQ---DGVPVGIVTRRDLLKLLL 161 (170)
T ss_dssp TCBHHHHCBCC-------SCCBCTTSBHHHHHHHHHHTTCSEEEEEE---TTEEEEEEEHHHHTTTSC
T ss_pred ccchhhhcccC-------cccCCcchhHHHHHHHHHHcCCcEEEEEE---CCEEEEEEEHHHHHHHHH
Confidence 46789999986 89999999999999999999999999997 689999999999998764
No 4
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.17 E-value=5.4e-11 Score=80.10 Aligned_cols=58 Identities=19% Similarity=0.366 Sum_probs=53.4
Q ss_pred ccHHHHhhh--cCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 54 TTISDILKA--KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 54 ~~v~dim~~--~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
.+++++|.+ . ++++.+++++.+|++.|.+++++.+||+| ++|+++|+||.+|+++++.
T Consensus 28 ~~v~dim~~~~~-------~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd--~~~~~~Givt~~dl~~~~~ 87 (149)
T 3k2v_A 28 LRVNDIMHTGDE-------IPHVGLQATLRDALLEITRKNLGMTAICD--DDMNIIGIFTDGDLRRVFD 87 (149)
T ss_dssp SBGGGTSBCGGG-------SCEECTTCBHHHHHHHHHHHTSSEEEEEC--TTCBEEEEEEHHHHHHHHC
T ss_pred cCHHHHhcCCCC-------CeEECCCCcHHHHHHHHHhCCCcEEEEEC--CCCcEEEEecHHHHHHHHh
Confidence 589999987 5 88999999999999999999999999998 7899999999999998753
No 5
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.15 E-value=7.8e-12 Score=85.96 Aligned_cols=59 Identities=19% Similarity=0.307 Sum_probs=54.7
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..+++++|.+. ++++.+++++.+|+++|.+++++.+||+| ++|+++|+||.+|+++++.
T Consensus 97 ~~~v~~~m~~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVvd--~~g~~vGiit~~dil~~~~ 155 (180)
T 3sl7_A 97 GKVVGDLMTPS-------PLVVRDSTNLEDAARLLLETKFRRLPVVD--ADGKLIGILTRGNVVRAAL 155 (180)
T ss_dssp TCBHHHHSEES-------CCCEETTSBHHHHHHHHTTSTTCEEEEEC--TTCBEEEEEEHHHHHHHHH
T ss_pred cccHHHHhCCC-------ceEeCCCCcHHHHHHHHHHcCCCEEEEEC--CCCeEEEEEEHHHHHHHHH
Confidence 56899999975 78999999999999999999999999998 7899999999999998864
No 6
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=99.12 E-value=3.2e-10 Score=67.06 Aligned_cols=46 Identities=26% Similarity=0.450 Sum_probs=43.6
Q ss_pred eEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 71 WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 71 ~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
++++.+++++.+|++.|.+++++++||++ + ++++|+||.+|+++++
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d--~-~~l~Givt~~dl~~~~ 47 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME--G-DEILGVVTERDILDKV 47 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE--T-TEEEEEEEHHHHHHHT
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEE--C-CEEEEEEEHHHHHHHH
Confidence 78999999999999999999999999998 5 9999999999999875
No 7
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.11 E-value=2.1e-10 Score=76.45 Aligned_cols=59 Identities=22% Similarity=0.308 Sum_probs=54.8
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..++.++|.+. ++++.+++++.+|+++|.+++++.+||+| ++|+++|+||.+|+++.+.
T Consensus 84 ~~~v~~~m~~~-------~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd--~~g~~~Giit~~dil~~~~ 142 (152)
T 4gqw_A 84 GKLVGDLMTPA-------PLVVEEKTNLEDAAKILLETKYRRLPVVD--SDGKLVGIITRGNVVRAAL 142 (152)
T ss_dssp CCBHHHHSEES-------CCCEESSSBHHHHHHHHHHSSCCEEEEEC--TTSBEEEEEEHHHHHHHHH
T ss_pred cccHHHhcCCC-------ceEECCCCcHHHHHHHHHHCCCCEEEEEC--CCCcEEEEEEHHHHHHHHH
Confidence 46899999985 78999999999999999999999999998 7899999999999999875
No 8
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.09 E-value=3.1e-10 Score=74.42 Aligned_cols=59 Identities=17% Similarity=0.275 Sum_probs=53.0
Q ss_pred CcccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
...+++++|++ +.++.+++++.+|+++|.+++++.+||+| ++|+++|+||.+|+++++.
T Consensus 67 ~~~~v~~~m~~--------~~~v~~~~~l~~a~~~m~~~~~~~lpVvd--~~g~~~Giit~~dll~~l~ 125 (127)
T 3nqr_A 67 EAFSMDKVLRT--------AVVVPESKRVDRMLKEFRSQRYHMAIVID--EFGGVSGLVTIEDILELIV 125 (127)
T ss_dssp CCCCHHHHCBC--------CCEEETTCBHHHHHHHHHHTTCCEEEEEC--TTSCEEEEEEHHHHHHHC-
T ss_pred CCCCHHHHcCC--------CeEECCCCcHHHHHHHHHhcCCeEEEEEe--CCCCEEEEEEHHHHHHHHh
Confidence 35789999954 67899999999999999999999999998 7899999999999998764
No 9
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.08 E-value=2.3e-10 Score=75.57 Aligned_cols=61 Identities=13% Similarity=0.279 Sum_probs=52.7
Q ss_pred ccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 54 ~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
.+++++|++.. +++++++++++.+|++.|.+++++.+||+++ ++++++|+||.+|+++++.
T Consensus 2 ~~v~~iM~~~~-----~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~-~~~~lvGivt~~dl~~~~~ 62 (130)
T 3hf7_A 2 VSVNDIMVPRN-----EIVGIDINDDWKSIVRQLTHSPHGRIVLYRD-SLDDAISMLRVREAYRLMT 62 (130)
T ss_dssp CBHHHHSEEGG-----GCCEEETTSCHHHHHHHHHTCSSSEEEEESS-SGGGEEEEEEHHHHHHHHT
T ss_pred cCHHHhCccHH-----HEEEEcCCCCHHHHHHHHHHCCCCeEEEEcC-CCCcEEEEEEHHHHHHHHh
Confidence 57999997532 2889999999999999999999999999961 2589999999999998754
No 10
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.07 E-value=3.9e-10 Score=74.19 Aligned_cols=58 Identities=17% Similarity=0.288 Sum_probs=53.3
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..+++++|+ + +.++.+++++.+|++.|.+++++.+||+| ++|+++|+||.+|+++++.
T Consensus 71 ~~~v~~~m~-~-------~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd--~~g~~vGivt~~dil~~l~ 128 (130)
T 3i8n_A 71 QKQLGAVMR-P-------IQVVLNNTALPKVFDQMMTHRLQLALVVD--EYGTVLGLVTLEDIFEHLV 128 (130)
T ss_dssp TSBHHHHSE-E-------CCEEETTSCHHHHHHHHHHHTCCEEEEEC--TTSCEEEEEEHHHHHHHHH
T ss_pred cCCHHHHhc-C-------CcCcCCCCcHHHHHHHHHHcCCeEEEEEc--CCCCEEEEEEHHHHHHHHc
Confidence 578999994 3 78999999999999999999999999998 7899999999999999874
No 11
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.07 E-value=2.8e-10 Score=73.60 Aligned_cols=58 Identities=31% Similarity=0.424 Sum_probs=53.0
Q ss_pred ccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 54 ~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
++++++|.++ +.++.+++++.+|++.|.+++.+.+||+| ++|+++|+||.+|+++++.
T Consensus 1 ~~v~~im~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~~G~vt~~dl~~~~~ 58 (122)
T 3kpb_A 1 TLVKDILSKP-------PITAHSNISIMEAAKILIKHNINHLPIVD--EHGKLVGIITSWDIAKALA 58 (122)
T ss_dssp CBHHHHCCSC-------CCCEETTSBHHHHHHHHHHHTCSCEEEEC--TTSBEEEEECHHHHHHHHH
T ss_pred CchHHhhCCC-------CEEeCCCCcHHHHHHHHHHcCCCeEEEEC--CCCCEEEEEEHHHHHHHHH
Confidence 3688999975 88999999999999999999999999998 7899999999999998753
No 12
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.06 E-value=4.8e-10 Score=74.03 Aligned_cols=58 Identities=10% Similarity=0.175 Sum_probs=52.4
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..++.++|. + ++++.+++++.+|++.|.+++++.+||+| ++|+++|+||.+|+++++.
T Consensus 69 ~~~v~~~m~-~-------~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd--~~g~lvGiit~~Dil~~l~ 126 (130)
T 3hf7_A 69 KEIMLRAAD-E-------IYFVPEGTPLSTQLVKFQRNKKKVGLVVD--EYGDIQGLVTVEDILEEIV 126 (130)
T ss_dssp HHHHHHHSB-C-------CCEEETTCBHHHHHHHHHHHCCCEEEEEC--TTSCEEEEEEHHHHHHHHH
T ss_pred hhhHHHhcc-C-------CeEeCCCCcHHHHHHHHHhcCCeEEEEEc--CCCCEEEEeeHHHHHHHHh
Confidence 356899993 3 78999999999999999999999999998 7899999999999999875
No 13
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.05 E-value=4.1e-10 Score=75.54 Aligned_cols=58 Identities=17% Similarity=0.337 Sum_probs=52.1
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..++.++| ++ ++++.+++++.+|+++|.+++++.+||+| ++|+++|+||.+|+++++.
T Consensus 87 ~~~v~~~m-~~-------~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd--~~g~~~Giit~~dil~~l~ 144 (148)
T 3lv9_A 87 KIELEEIL-RD-------IIYISENLTIDKALERIRKEKLQLAIVVD--EYGGTSGVVTIEDILEEIV 144 (148)
T ss_dssp CCCGGGTC-BC-------CEEEETTSBHHHHHHHHHHHTCSEEEEEC--TTSSEEEEEEHHHHHHHHH
T ss_pred CccHHHhc-CC-------CeEECCCCCHHHHHHHHHhcCCeEEEEEe--CCCCEEEEEEHHHHHHHHh
Confidence 45677888 43 89999999999999999999999999998 7899999999999998864
No 14
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.05 E-value=2.3e-10 Score=78.38 Aligned_cols=59 Identities=17% Similarity=0.122 Sum_probs=52.4
Q ss_pred ccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 54 ~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
.+++++|.+.. .+.++.+++|+.+|+++|.+++++++||+| ++|+++|+||.+|+++++
T Consensus 15 ~~~~~iM~P~~-----~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd--~~~~lvGiit~~Di~~~~ 73 (156)
T 3k6e_A 15 GQEETFLTPAK-----NLAVLIDTHNADHATLLLSQMTYTRVPVVT--DEKQFVGTIGLRDIMAYQ 73 (156)
T ss_dssp TTGGGGEEETT-----SSCCEETTSBHHHHHHHHTTSSSSEEEEEC--C-CBEEEEEEHHHHHHHH
T ss_pred ccHHHhCcchh-----HeEEECCcCCHHHHHHHHHHcCCcEEEEEc--CCCcEEEEEEecchhhhh
Confidence 46889998753 389999999999999999999999999998 789999999999998765
No 15
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.05 E-value=4.1e-10 Score=76.11 Aligned_cols=58 Identities=24% Similarity=0.417 Sum_probs=53.2
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..+++++| ++ ++++.+++++.+|++.|.+++++.+||+| ++|+++|+||.+|+++++.
T Consensus 85 ~~~v~~~m-~~-------~~~v~~~~~l~~~~~~m~~~~~~~lpVvd--~~g~~vGivt~~dil~~l~ 142 (153)
T 3oco_A 85 KAKISTIM-RD-------IVSVPENMKVPDVMEEMSAHRVPMAIVID--EYGGTSGIITDKDVYEELF 142 (153)
T ss_dssp TSBGGGTC-BC-------CEEEETTSBHHHHHHHHHHTTCSCEEEEC--TTSCEEEEECHHHHHHHHH
T ss_pred CCcHHHHh-CC-------CeEECCCCCHHHHHHHHHHcCCcEEEEEe--CCCCEEEEeeHHHHHHHHh
Confidence 46788999 54 89999999999999999999999999998 7899999999999999875
No 16
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.05 E-value=2.6e-10 Score=73.76 Aligned_cols=58 Identities=24% Similarity=0.373 Sum_probs=53.3
Q ss_pred ccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 54 ~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
.++.++|.+. +.++.+++++.+|++.|.+++.+.+||+| ++|+++|+||.+|+++++.
T Consensus 62 ~~v~~~~~~~-------~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd--~~g~~~Givt~~dl~~~l~ 119 (122)
T 3kpb_A 62 KTIEEIMTRN-------VITAHEDEPVDHVAIKMSKYNISGVPVVD--DYRRVVGIVTSEDISRLFG 119 (122)
T ss_dssp CBGGGTSBSS-------CCCEETTSBHHHHHHHHHHHTCSEEEEEC--TTCBEEEEEEHHHHHHHHC
T ss_pred cCHHHHhcCC-------CeEECCCCCHHHHHHHHHHhCCCeEEEEC--CCCCEEEEEeHHHHHHHhh
Confidence 4788999875 88999999999999999999999999998 7799999999999999874
No 17
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.05 E-value=4.8e-10 Score=75.78 Aligned_cols=59 Identities=20% Similarity=0.355 Sum_probs=54.4
Q ss_pred CcccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
...+++++|.++ +.++.+++++.+|+++|.+++++.+||+| +|+++|+||.+|+++++.
T Consensus 76 ~~~~v~~~m~~~-------~~~v~~~~~l~~~~~~m~~~~~~~lpVvd---~g~~~Giit~~dil~~l~ 134 (157)
T 4fry_A 76 KATRVEEIMTAK-------VRYVEPSQSTDECMALMTEHRMRHLPVLD---GGKLIGLISIGDLVKSVI 134 (157)
T ss_dssp SSCBHHHHSBSS-------CCCBCTTSBHHHHHHHHHHHTCSEEEEEE---TTEEEEEEEHHHHHHHHH
T ss_pred cccCHHHHcCCC-------CcEECCCCcHHHHHHHHHHcCCCEEEEEE---CCEEEEEEEHHHHHHHHH
Confidence 367899999975 88999999999999999999999999997 699999999999999865
No 18
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.05 E-value=1.8e-10 Score=78.35 Aligned_cols=62 Identities=24% Similarity=0.355 Sum_probs=54.3
Q ss_pred CcccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCC---eeEEEEeHHHHHHHhh
Q 033339 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQK---SVAGIITERGIFKACH 120 (121)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~---~lvGiVt~~Di~~~~~ 120 (121)
...++.++|.+.+ +++++.+++++.+|+++|.+++++.+||+| ++| +++|+||.+|+++++.
T Consensus 79 ~~~~v~~~m~~~~-----~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd--~~g~~~~~vGiit~~dil~~l~ 143 (159)
T 3fv6_A 79 TSVPVHIIMTRMP-----NITVCRREDYVMDIAKHLIEKQIDALPVIK--DTDKGFEVIGRVTKTNMTKILV 143 (159)
T ss_dssp TTCBGGGTSEETT-----SCCCBCTTSBHHHHHHHHHHHTCSEEEEEE--ECSSSEEEEEEEEHHHHHHHHH
T ss_pred cCcCHHHHHcCCC-----CcEEECCCCCHHHHHHHHHHcCCcEEEEEe--CCCcceeEEEEEEHHHHHHHHH
Confidence 3567899998721 178999999999999999999999999998 677 9999999999999865
No 19
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.04 E-value=2.7e-10 Score=82.61 Aligned_cols=59 Identities=14% Similarity=0.157 Sum_probs=54.2
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..+++|+|+++ ++++.+++++.+|+++|.+++++.+||+| ++|+++|+||.+|+++++.
T Consensus 6 ~~~v~~im~~~-------~~~v~~~~~~~~a~~~m~~~~~~~lpVvd--~~~~l~Giit~~di~~~~~ 64 (245)
T 3l2b_A 6 KLKVEDLEMDK-------IAPLAPEVSLKMAWNIMRDKNLKSIPVAD--GNNHLLGMLSTSNITATYM 64 (245)
T ss_dssp CCBGGGSCCBC-------CCCBCTTCBHHHHHHHHHHTTCSEEEEEC--TTCBEEEEEEHHHHHHHHH
T ss_pred cCcHHHhcCCC-------CcEECCCCcHHHHHHHHHHcCCCEEEEEc--CCCEEEEEEEHHHHHHHHH
Confidence 46799999875 88999999999999999999999999998 7899999999999998763
No 20
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.04 E-value=4.6e-10 Score=73.83 Aligned_cols=58 Identities=9% Similarity=0.237 Sum_probs=51.7
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..+++++|++ ++++.+++++.+|+++|.+++++.+||+| ++|+++|+||.+|+++++.
T Consensus 68 ~~~v~~~m~~--------~~~v~~~~~l~~~~~~m~~~~~~~~pVvd--~~g~~~Giit~~Dil~~l~ 125 (129)
T 3jtf_A 68 ALDIRSLVRP--------AVFIPEVKRLNVLLREFRASRNHLAIVID--EHGGISGLVTMEDVLEQIV 125 (129)
T ss_dssp TSCGGGGCBC--------CCEEETTCBHHHHHHHHHTSSCCEEEEEC--C-CCEEEEEEHHHHHHHHH
T ss_pred CcCHHHHhCC--------CeEeCCCCcHHHHHHHHHhcCCeEEEEEe--CCCCEEEEEEHHHHHHHHh
Confidence 4678899853 68999999999999999999999999998 7899999999999998864
No 21
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.04 E-value=3e-10 Score=76.17 Aligned_cols=61 Identities=13% Similarity=0.278 Sum_probs=54.3
Q ss_pred CcccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCC-CeeEEEEeHHHHHHHh
Q 033339 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ-KSVAGIITERGIFKAC 119 (121)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~-~~lvGiVt~~Di~~~~ 119 (121)
...+++++|++.. +++++.+++++.+|++.|.+++++++||++ ++ |+++|+||.+|+++++
T Consensus 21 ~~~~v~diM~~~~-----~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd--~~~~~lvGivt~~dl~~~~ 82 (148)
T 3lv9_A 21 EEKKIREIMVPRT-----DMVCIYESDSEEKILAILKEEGVTRYPVCR--KNKDDILGFVHIRDLYNQK 82 (148)
T ss_dssp GTCBGGGTSEETT-----TCCCEETTCCHHHHHHHHHHSCCSEEEEES--SSTTSEEEEEEHHHHHHHH
T ss_pred CCCCHHHccccHH-----HeEEECCCCCHHHHHHHHHHCCCCEEEEEc--CCCCcEEEEEEHHHHHHHH
Confidence 4678999999721 188999999999999999999999999998 66 8999999999999875
No 22
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.04 E-value=2.5e-10 Score=84.44 Aligned_cols=60 Identities=13% Similarity=0.148 Sum_probs=53.5
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
..+|+|+|+++ ++++.+++++.+|+++|.++++..+|||+++++++++|+||++|+++++
T Consensus 12 ~~~v~diMt~~-------vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l 71 (250)
T 2d4z_A 12 NIQVGDIMVRD-------VTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLL 71 (250)
T ss_dssp SCBTTSSSBSS-------CCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHH
T ss_pred CCChHHhcCCC-------CeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHH
Confidence 56899999986 8999999999999999999999999999832247899999999999875
No 23
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.04 E-value=5.7e-10 Score=77.07 Aligned_cols=58 Identities=12% Similarity=0.224 Sum_probs=52.4
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..+++++| ++ ++++.+++++.+|+++|.+++++.+||+| ++|+++|+||.+|+++++.
T Consensus 106 ~~~v~~im-~~-------~~~v~~~~~l~~a~~~m~~~~~~~~pVvd--~~g~lvGiit~~Dil~~l~ 163 (172)
T 3lhh_A 106 RLELVDLV-KN-------CNFVPNSLSGMELLEHFRTTGSQMVFVVD--EYGDLKGLVTLQDMMDALT 163 (172)
T ss_dssp CCCGGGGC-BC-------CEEEETTCCHHHHHHHHHHHTCSEEEEEC--TTSCEEEEEEHHHHHHHHH
T ss_pred cccHHHHh-cC-------CeEeCCCCCHHHHHHHHHHcCCeEEEEEe--CCCCEEEEeeHHHHHHHHh
Confidence 45678888 43 89999999999999999999999999998 7899999999999999874
No 24
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.04 E-value=6.7e-10 Score=71.92 Aligned_cols=59 Identities=17% Similarity=0.325 Sum_probs=54.2
Q ss_pred CcccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
...++.++|.+. +.++.+++++.+|++.|.+++++.+||+| + |+++|+||.+|+++++.
T Consensus 63 ~~~~v~~~m~~~-------~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd--~-~~~~Gvit~~dl~~~l~ 121 (125)
T 1pbj_A 63 AEVKVWEVMERD-------LVTISPRATIKEAAEKMVKNVVWRLLVEE--D-DEIIGVISATDILRAKM 121 (125)
T ss_dssp TTSBHHHHCBCG-------GGEECTTSCHHHHHHHHHHHTCSEEEEEE--T-TEEEEEEEHHHHHHHHC
T ss_pred cccCHHHHcCCC-------CeEECCCCCHHHHHHHHHhcCCcEEEEEE--C-CEEEEEEEHHHHHHHHH
Confidence 467899999875 89999999999999999999999999998 5 99999999999998864
No 25
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.03 E-value=1e-09 Score=72.55 Aligned_cols=65 Identities=18% Similarity=0.297 Sum_probs=53.6
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..++.++|.+.+.. ..++.++.+++++.+|++.|.+++++.+||+| ++|+++|+||.+|+++++.
T Consensus 76 ~~~v~~~m~~~~~~-~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd--~~g~~~Giit~~dil~~l~ 140 (144)
T 2nyc_A 76 SLSVGEALMRRSDD-FEGVYTCTKNDKLSTIMDNIRKARVHRFFVVD--DVGRLVGVLTLSDILKYIL 140 (144)
T ss_dssp CSBHHHHHHHCC-------CEECTTSBHHHHHHHHHHHTCSEEEEEC--TTSBEEEEEEHHHHHHHHH
T ss_pred CccHHHHHhcCccc-cCCCeEECCCCcHHHHHHHHHHCCCCEEEEEC--CCCCEEEEEEHHHHHHHHH
Confidence 56899999873100 00178999999999999999999999999998 7899999999999998864
No 26
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.03 E-value=3.4e-10 Score=74.47 Aligned_cols=60 Identities=10% Similarity=0.256 Sum_probs=53.1
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCC-CeeEEEEeHHHHHHHh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ-KSVAGIITERGIFKAC 119 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~-~~lvGiVt~~Di~~~~ 119 (121)
..+++++|++.. +++++++++++.+|++.|.+++++++||++ ++ ++++|+||.+|+++++
T Consensus 4 ~~~v~diM~~~~-----~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd--~~~~~~~Givt~~dl~~~~ 64 (129)
T 3jtf_A 4 ERTVADIMVPRS-----RMDLLDISQPLPQLLATIIETAHSRFPVYE--DDRDNIIGILLAKDLLRYM 64 (129)
T ss_dssp CCBHHHHCEEGG-----GCCCEETTSCHHHHHHHHHHSCCSEEEEES--SSTTCEEEEEEGGGGGGGG
T ss_pred CCCHHHhCccHH-----HeEEECCCCCHHHHHHHHHHcCCCEEEEEc--CCCCcEEEEEEHHHHHhHh
Confidence 568999999532 278999999999999999999999999998 54 8999999999998764
No 27
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.03 E-value=1.5e-10 Score=76.20 Aligned_cols=62 Identities=11% Similarity=0.248 Sum_probs=52.6
Q ss_pred CcccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCC-CeeEEEEeHHHHHHHhh
Q 033339 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ-KSVAGIITERGIFKACH 120 (121)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~-~~lvGiVt~~Di~~~~~ 120 (121)
...+++++|++.. +++++.+++++.+|++.|.+++++++||++ ++ |+++|+||.+|+++++.
T Consensus 4 ~~~~v~~iM~~~~-----~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd--~~~~~~~Givt~~dl~~~~~ 66 (130)
T 3i8n_A 4 QDVPVTQVMTPRP-----VVFRVDATMTINEFLDKHKDTPFSRPLVYS--EQKDNIIGFVHRLELFKMQQ 66 (130)
T ss_dssp ---CCTTTSCCBC-----CCCEEETTSBHHHHHHHTTTCSCSCCEEES--SSTTCEEEECCHHHHHHHHH
T ss_pred CcCCHhhCCCcHH-----HEEEEcCCCCHHHHHHHHHhCCCCEEEEEe--CCCCcEEEEEEHHHHHHHHh
Confidence 3567899999753 267999999999999999999999999998 66 89999999999998753
No 28
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.03 E-value=1.6e-10 Score=75.81 Aligned_cols=59 Identities=10% Similarity=0.211 Sum_probs=54.1
Q ss_pred ccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhhC
Q 033339 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACHN 121 (121)
Q Consensus 54 ~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~~ 121 (121)
.+++++|.++ +.++.+++++.+|++.|.+++.+.+||+| ++|+++|+||.+|+++++.+
T Consensus 68 ~~v~~~m~~~-------~~~v~~~~~l~~~~~~~~~~~~~~lpVvd--~~g~~~Giit~~dll~~l~~ 126 (128)
T 3gby_A 68 EKLGEELLET-------VRSYRPGEQLFDNLISVAAAKCSVVPLAD--EDGRYEGVVSRKRILGFLAE 126 (128)
T ss_dssp CBCCGGGCBC-------CCCBCTTSBGGGSHHHHHHCSSSEEEEEC--TTCBEEEEEEHHHHHHHHHT
T ss_pred CcHHHHccCC-------CcEECCCCCHHHHHHHHHhCCCcEEEEEC--CCCCEEEEEEHHHHHHHHHh
Confidence 5688999875 78999999999999999999999999998 78999999999999998753
No 29
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.02 E-value=3.6e-10 Score=75.11 Aligned_cols=61 Identities=11% Similarity=0.217 Sum_probs=53.0
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCC-CeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ-KSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~-~~lvGiVt~~Di~~~~~ 120 (121)
..+++++|++.. ++.++.+++++.+|++.|.+++++++||++ ++ ++++|+||.+|+++++.
T Consensus 2 ~~~v~~iM~~~~-----~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd--~~~~~~vGivt~~dl~~~~~ 63 (136)
T 3lfr_A 2 DLQVRDIMVPRS-----QMISIKATQTPREFLPAVIDAAHSRYPVIG--ESHDDVLGVLLAKDLLPLIL 63 (136)
T ss_dssp -CBHHHHSEEGG-----GCCCEETTCCHHHHHHHHHHHCCSEEEEES--SSTTCEEEEEEGGGGGGGGG
T ss_pred CCChHhccccHH-----HEEEEcCCCCHHHHHHHHHhCCCCEEEEEc--CCCCcEEEEEEHHHHHHHHH
Confidence 467999999532 278999999999999999999999999998 56 79999999999997653
No 30
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.01 E-value=6.7e-10 Score=72.89 Aligned_cols=58 Identities=19% Similarity=0.401 Sum_probs=53.5
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..++.++|.+. +.++++++++.+|++.|.+++.+.+||+| + |+++|+||.+|+++++.
T Consensus 73 ~~~v~~~m~~~-------~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd--~-g~~~Giit~~dil~~l~ 130 (133)
T 1y5h_A 73 TATAGELARDS-------IYYVDANASIQEMLNVMEEHQVRRVPVIS--E-HRLVGIVTEADIARHLP 130 (133)
T ss_dssp TSBHHHHHTTC-------CCCEETTCCHHHHHHHHHHHTCSEEEEEE--T-TEEEEEEEHHHHHHTCC
T ss_pred ccCHHHHhcCC-------CEEECCCCCHHHHHHHHHHcCCCEEEEEE--C-CEEEEEEEHHHHHHHHH
Confidence 57899999875 88999999999999999999999999998 5 99999999999998764
No 31
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.01 E-value=3.8e-10 Score=73.98 Aligned_cols=60 Identities=12% Similarity=0.303 Sum_probs=52.5
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCC-CeeEEEEeHHHHHHHh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ-KSVAGIITERGIFKAC 119 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~-~~lvGiVt~~Di~~~~ 119 (121)
..+++++|++.. +++++++++++.+|++.|.+++++++||++ ++ |+++|+||.+|+++++
T Consensus 2 ~~~v~diM~~~~-----~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd--~~~~~~vGivt~~dl~~~~ 62 (127)
T 3nqr_A 2 DQRVRDIMIPRS-----QMITLKRNQTLDECLDVIIESAHSRFPVIS--EDKDHIEGILMAKDLLPFM 62 (127)
T ss_dssp -CBHHHHSEEGG-----GCCCEETTCCHHHHHHHHHHHCCSEEEEES--SSTTCEEEEEEGGGGGGGG
T ss_pred CcCHHHhcccHH-----HeEEEcCCCCHHHHHHHHHhCCCCEEEEEc--CCCCcEEEEEEHHHHHHHH
Confidence 467999999632 278999999999999999999999999998 66 8999999999998765
No 32
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.01 E-value=3.6e-10 Score=75.10 Aligned_cols=58 Identities=14% Similarity=0.273 Sum_probs=52.1
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..+++++|++ ++++.+++++.+|+++|.+++++.+||+| ++|+++|+||.+|+++.+.
T Consensus 69 ~~~v~~~m~~--------~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd--~~g~lvGiit~~Dil~~l~ 126 (136)
T 3lfr_A 69 SDDVKKLLRP--------ATFVPESKRLNVLLREFRANHNHMAIVID--EYGGVAGLVTIEDVLEQIV 126 (136)
T ss_dssp GCCGGGTCBC--------CCEEETTCBHHHHHHHHHHHTCCEEEEEC--TTSCEEEEEEHHHHHTTC-
T ss_pred CcCHHHHcCC--------CeEECCCCcHHHHHHHHHhcCCeEEEEEe--CCCCEEEEEEHHHHHHHHh
Confidence 5678899954 68999999999999999999999999998 7899999999999998753
No 33
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.00 E-value=9.1e-10 Score=74.22 Aligned_cols=65 Identities=23% Similarity=0.338 Sum_probs=53.4
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..++.++|.... .|+.++.++.+++++.+|++.|.+++++.+||+| ++|+++|+||.+|+++++.
T Consensus 86 ~~~v~~~m~~~~-~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd--~~g~~vGiit~~dil~~l~ 150 (152)
T 2uv4_A 86 DVSVTKALQHRS-HYFEGVLKCYLHETLETIINRLVEAEVHRLVVVD--ENDVVKGIVSLSDILQALV 150 (152)
T ss_dssp TSBGGGGGGTCC-HHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEEC--TTSBEEEEEEHHHHHHHHC
T ss_pred cchHHHHHhhhh-cccCCCeEECCCCcHHHHHHHHHHcCCeEEEEEC--CCCeEEEEEEHHHHHHHHH
Confidence 457889996210 0000278999999999999999999999999998 7799999999999999875
No 34
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.00 E-value=4.2e-10 Score=80.48 Aligned_cols=59 Identities=17% Similarity=0.197 Sum_probs=53.8
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..+++++|.++ ++++.+++++.+|++.|.++++..+||+| ++|+++|+||.+|++..+.
T Consensus 115 ~~~v~~im~~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVVD--~~g~lvGiIT~~Dil~~i~ 173 (205)
T 3kxr_A 115 HEPLISLLSED-------SRALTANTTLLDAAEAIEHSREIELPVID--DAGELIGRVTLRAATALVR 173 (205)
T ss_dssp TSBGGGGCCSS-------CCCEETTSCHHHHHHHHHTSSCSEEEEEC--TTSBEEEEEEHHHHHHHHH
T ss_pred cchHHHHhcCC-------CeEECCCCCHHHHHHHHHhcCCCEEEEEc--CCCeEEEEEEHHHHHHHHH
Confidence 46788888765 89999999999999999999999999999 7899999999999998764
No 35
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.00 E-value=1.7e-09 Score=73.93 Aligned_cols=62 Identities=32% Similarity=0.496 Sum_probs=54.9
Q ss_pred CcccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
...+++++|.+... ++.++.+++++.+|++.|.+++++++||+| ++|+++|+||.+|+++++
T Consensus 22 ~~~~v~dim~~~~~----~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd--~~~~~~Givt~~dl~~~~ 83 (165)
T 3fhm_A 22 MATFVKDLLDRKGR----DVVTVGPDVSIGEAAGTLHAHKIGAVVVTD--ADGVVLGIFTERDLVKAV 83 (165)
T ss_dssp SSCBHHHHHHHHCS----CCCEECTTSBHHHHHHHHHHHTCSEEEEEC--TTSCEEEEEEHHHHHHHH
T ss_pred hhcCHHHHhccCCC----CCeEECCCCCHHHHHHHHHHcCCCEEEEEc--CCCeEEEEEEHHHHHHHH
Confidence 46799999997300 288999999999999999999999999998 789999999999998864
No 36
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.99 E-value=9.3e-10 Score=73.71 Aligned_cols=60 Identities=12% Similarity=0.185 Sum_probs=54.1
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
..+++++|.+.. +++++.+++++.+|++.|.+++++++||+| ++|+++|+||.+|+++++
T Consensus 14 ~~~v~~im~~~~-----~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd--~~~~~~Givt~~dl~~~~ 73 (150)
T 3lqn_A 14 QIFVKDLMISSE-----KVAHVQIGNGLEHALLVLVKSGYSAIPVLD--PMYKLHGLISTAMILDGI 73 (150)
T ss_dssp HCBHHHHSEEGG-----GSCCBCTTSBHHHHHHHHHHHTCSEEEEEC--TTCBEEEEEEHHHHHHHT
T ss_pred cCChhhcccCCC-----ceEEECCCCcHHHHHHHHHHcCCcEEEEEC--CCCCEEEEEEHHHHHHHH
Confidence 568999999531 278999999999999999999999999998 789999999999999875
No 37
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.99 E-value=9.7e-10 Score=72.55 Aligned_cols=57 Identities=26% Similarity=0.428 Sum_probs=52.2
Q ss_pred CcccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHH
Q 033339 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFK 117 (121)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~ 117 (121)
...+++++|.++ ++++.+++++.+|++.|.+++++++||+| ++|+++|+||.+|+++
T Consensus 5 ~~~~v~~im~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~~Givt~~dl~~ 61 (138)
T 2yzi_A 5 MKAPIKVYMTKK-------LLGVKPSTSVQEASRLMMEFDVGSLVVIN--DDGNVVGFFTKSDIIR 61 (138)
T ss_dssp TTSBGGGTCBCC-------CCEECTTSBHHHHHHHHHHHTCSEEEEEC--TTSCEEEEEEHHHHHH
T ss_pred hhhhHHHHhcCC-------CeEECCCCcHHHHHHHHHHcCCCEEEEEc--CCCcEEEEEeHHHHHH
Confidence 456899999865 89999999999999999999999999998 7899999999999974
No 38
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.99 E-value=6.4e-10 Score=72.99 Aligned_cols=59 Identities=27% Similarity=0.385 Sum_probs=53.8
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..++.++|.++ +.++++++++.+|++.|.+++.+.+||+| ++|+++|+||.+|+++.+.
T Consensus 66 ~~~v~~~~~~~-------~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd--~~g~~~Giit~~dll~~~~ 124 (133)
T 2ef7_A 66 ETKAEEFMTAS-------LITIREDSPITGALALMRQFNIRHLPVVD--DKGNLKGIISIRDITRAID 124 (133)
T ss_dssp TCBGGGTSEEC-------CCCEETTSBHHHHHHHHHHHTCSEEEEEC--TTSCEEEEEEHHHHHHHHH
T ss_pred ccCHHHHcCCC-------CEEECCCCCHHHHHHHHHHcCCCEEEEEC--CCCeEEEEEEHHHHHHHHH
Confidence 46789999875 88999999999999999999999999998 7899999999999998764
No 39
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.99 E-value=1e-09 Score=72.92 Aligned_cols=58 Identities=19% Similarity=0.339 Sum_probs=52.4
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCC--eeEEEEeHHHHHHHh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQK--SVAGIITERGIFKAC 119 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~--~lvGiVt~~Di~~~~ 119 (121)
..+++++|.++ +.++.+++++.+|++.|.+++++.+||+| +++ +++|+||.+|+++++
T Consensus 4 ~~~v~~im~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~~~~Givt~~dl~~~~ 63 (141)
T 2rih_A 4 AIRTSELLKRP-------PVSLPETATIREVATELAKNRVGLAVLTA--RDNPKRPVAVVSERDILRAV 63 (141)
T ss_dssp -CBGGGGCCSC-------CEEEETTCBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEEEEHHHHHHHH
T ss_pred ceEHHHHhcCC-------CeEeCCCCcHHHHHHHHHHcCCCEEEEEc--CCCcceeEEEEEHHHHHHHH
Confidence 35788999875 89999999999999999999999999998 677 999999999999875
No 40
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=98.99 E-value=9.8e-10 Score=74.48 Aligned_cols=61 Identities=13% Similarity=0.181 Sum_probs=54.1
Q ss_pred CcccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
...+++++|.+.. +++++.+++++.+|++.|.+++++.+||+| ++|+++|+||.+|+++++
T Consensus 12 ~~~~v~~im~~~~-----~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd--~~~~lvGivt~~dl~~~~ 72 (159)
T 1yav_A 12 LEATVGQFMIEAD-----KVAHVQVGNNLEHALLVLTKTGYTAIPVLD--PSYRLHGLIGTNMIMNSI 72 (159)
T ss_dssp TTCBHHHHSEEGG-----GSCCEETTCBHHHHHHHHHHHCCSEEEEEC--TTCBEEEEEEHHHHHHHH
T ss_pred hHhhHHHHhCCcc-----ceEEECCCCcHHHHHHHHHhCCCcEEEEEC--CCCCEEEEeEHHHHHHHh
Confidence 3578999998721 188999999999999999999999999998 789999999999999875
No 41
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.99 E-value=1.4e-09 Score=74.01 Aligned_cols=59 Identities=19% Similarity=0.308 Sum_probs=53.8
Q ss_pred CcccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
...++.++|.+. ++++.+++++.+|+++|.+++++.+||+| + |+++|+||.+|+++++.
T Consensus 76 ~~~~v~~im~~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVvd--~-g~lvGiit~~dil~~~~ 134 (160)
T 2o16_A 76 FETPLFEVMHTD-------VTSVAPQAGLKESAIYMQKHKIGCLPVVA--K-DVLVGIITDSDFVTIAI 134 (160)
T ss_dssp CCCBHHHHSCSC-------EEEBCTTSBHHHHHHHHHHTTCSCEEEEE--T-TEEEEEECHHHHHHHHH
T ss_pred cccCHHHHhcCC-------CeEECCCCCHHHHHHHHHHhCCCEEEEEE--C-CEEEEEEEHHHHHHHHH
Confidence 357899999875 89999999999999999999999999998 5 99999999999998753
No 42
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.99 E-value=3.5e-10 Score=77.53 Aligned_cols=56 Identities=27% Similarity=0.369 Sum_probs=50.5
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
..++.++|.++ +.++.+++++.+|+++|.++++ +||+| ++|+++||||.+|+++++
T Consensus 85 ~~~v~~im~~~-------~~~v~~~~~l~~~~~~m~~~~~--lpVVd--~~g~l~GiiT~~Dil~~~ 140 (156)
T 3k6e_A 85 DTDIVHMTKTD-------VAVVSPDFTITEVLHKLVDESF--LPVVD--AEGIFQGIITRKSILKAV 140 (156)
T ss_dssp TSBGGGTCBCS-------CCCBCTTCCHHHHHHHTTTSSE--EEEEC--TTSBEEEEEEHHHHHHHH
T ss_pred ccCHHHhhcCC-------ceecccccHHHHHHHHHHHcCC--eEEEe--cCCEEEEEEEHHHHHHHH
Confidence 46788888875 8999999999999999998765 99999 899999999999999986
No 43
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.99 E-value=8.1e-10 Score=72.80 Aligned_cols=60 Identities=25% Similarity=0.436 Sum_probs=53.7
Q ss_pred CcccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcC-----CCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHN-----VGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~-----~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
...++.++|.++ +.++++++++.+|++.|.+++ ++.+||+| ++|+++|+||.+|+++.+.
T Consensus 71 ~~~~v~~~m~~~-------~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd--~~g~~~Giit~~dll~~~~ 135 (138)
T 2p9m_A 71 LETTIGDVMTKD-------VITIHEDASILEAIKKMDISGKKEEIINQLPVVD--KNNKLVGIISDGDIIRTIS 135 (138)
T ss_dssp SSCBHHHHSCSS-------CCCEETTSBHHHHHHHHTCC-----CCCEEEEEC--TTSBEEEEEEHHHHHHHHH
T ss_pred CCcCHHHHhCCC-------cEEECCCCCHHHHHHHHHhcCCccccccEEEEEC--CCCeEEEEEEHHHHHHHHH
Confidence 356899999875 889999999999999999999 99999998 7899999999999998764
No 44
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.99 E-value=4.6e-10 Score=73.56 Aligned_cols=57 Identities=14% Similarity=0.207 Sum_probs=52.4
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
..+++++|.+. +.++++++++.+|++.|.+++.+++||+| + |+++|+||.+|+.+++
T Consensus 4 s~~v~~~m~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~-~~~~Givt~~dl~~~~ 60 (128)
T 3gby_A 4 SVTFSYLAETD-------YPVFTLGGSTADAARRLAASGCACAPVLD--G-ERYLGMVHLSRLLEGR 60 (128)
T ss_dssp TCBGGGGCBCC-------SCCEETTSBHHHHHHHHHHHTCSEEEEEE--T-TEEEEEEEHHHHHTTC
T ss_pred ceEHHHhhcCC-------cceECCCCCHHHHHHHHHHCCCcEEEEEE--C-CEEEEEEEHHHHHHHH
Confidence 46789999886 88999999999999999999999999998 6 9999999999998764
No 45
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=98.98 E-value=1.5e-09 Score=73.33 Aligned_cols=59 Identities=15% Similarity=0.258 Sum_probs=53.8
Q ss_pred CcccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCC--CCeeEEEEeHHHHHHHh
Q 033339 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGE--QKSVAGIITERGIFKAC 119 (121)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~--~~~lvGiVt~~Di~~~~ 119 (121)
...+++++|.++ ++++.+++++.+|++.|.+++++++||+| + +|+++|+||.+|+++.+
T Consensus 11 ~~~~v~dim~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~pVvd--~~~~~~~~Givt~~dl~~~~ 71 (164)
T 2pfi_A 11 HHVRVEHFMNHS-------ITTLAKDTPLEEVVKVVTSTDVTEYPLVE--STESQILVGIVQRAQLVQAL 71 (164)
T ss_dssp CSCBHHHHCBCC-------CCCEETTCBHHHHHHHHHTCCCSEEEEES--CTTTCBEEEEEEHHHHHHHH
T ss_pred cCCCHHHHcCCC-------CeEECCCCcHHHHHHHHHhCCCCceeEEe--cCCCCEEEEEEEHHHHHHHH
Confidence 357899999985 88999999999999999999999999998 5 68999999999998865
No 46
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.98 E-value=6.4e-10 Score=80.61 Aligned_cols=58 Identities=21% Similarity=0.291 Sum_probs=48.8
Q ss_pred cccHHHHhh-hcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 53 STTISDILK-AKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 53 ~~~v~dim~-~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
..+++++|+ ++ +.++.+++++.+|+++|.+++++.+||+| ++|+++|+||.+|++++.
T Consensus 184 ~~~v~~im~~~~-------~~~~~~~~~~~~~~~~m~~~~~~~~pVvd--~~~~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 184 SLPVDYVMTKDN-------LVAVSTDDLVEDVKVTMSETRYSNYPVID--ENNKVVGSIARFHLISTH 242 (245)
T ss_dssp GSBHHHHSBCTT-------CCCEETTSBHHHHHHHHHHHCCSEEEEEC--TTCBEEEEEECC------
T ss_pred CCceeeEecCCc-------cEEECCCCcHHHHHHHHHhcCCceEEEEc--CCCeEEEEEEHHHhhchh
Confidence 568999998 54 89999999999999999999999999998 789999999999998864
No 47
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=98.97 E-value=4.9e-10 Score=81.88 Aligned_cols=59 Identities=17% Similarity=0.311 Sum_probs=54.0
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..+++++|+++ ++++.+++++.+|+++|.+++++.+||+| ++|+++|+||.+|+++++.
T Consensus 220 ~~~v~~im~~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVvd--~~~~lvGiit~~Dil~~~~ 278 (282)
T 2yzq_A 220 NKPVAEIMTRD-------VIVATPHMTVHEVALKMAKYSIEQLPVIR--GEGDLIGLIRDFDLLKVLV 278 (282)
T ss_dssp CCBGGGTCBSS-------CCCBCTTSBHHHHHHHHHHHTCSEEEEEE--TTTEEEEEEEHHHHGGGGC
T ss_pred cCCHHHhcCCC-------CceeCCCCCHHHHHHHHHHcCcceeEEEC--CCCCEEEEEeHHHHHHHHH
Confidence 46788999875 89999999999999999999999999998 6789999999999998764
No 48
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.96 E-value=1e-09 Score=72.23 Aligned_cols=59 Identities=19% Similarity=0.313 Sum_probs=53.7
Q ss_pred CcccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
...++.++|.++ +.++++++++.+|++.|.+++++.+||+| +|+++|+||.+|+++++.
T Consensus 72 ~~~~v~~~m~~~-------~~~v~~~~~l~~~~~~m~~~~~~~lpVvd---~g~~~Giit~~dll~~~~ 130 (135)
T 2rc3_A 72 KDTQVKEIMTRQ-------VAYVDLNNTNEDCMALITEMRVRHLPVLD---DGKVIGLLSIGDLVKDAI 130 (135)
T ss_dssp GGSBGGGTSBCS-------CCCBCTTCBHHHHHHHHHHHTCSEEEEEE---TTEEEEEEEHHHHHHHHH
T ss_pred ccCCHHHhccCC-------CeEECCCCcHHHHHHHHHHhCCCEEEEEe---CCEEEEEEEHHHHHHHHH
Confidence 357889999875 88999999999999999999999999997 589999999999998865
No 49
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.96 E-value=9.3e-10 Score=74.97 Aligned_cols=58 Identities=19% Similarity=0.281 Sum_probs=53.0
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
..+++++|.++ ++++.+++++.+|++.|.+++++.+||+| ++|+++|+||.+|+++++
T Consensus 4 ~~~v~dim~~~-------~~~v~~~~tl~~a~~~m~~~~~~~~pVvd--~~~~lvGivt~~dl~~~~ 61 (160)
T 2o16_A 4 MIKVEDMMTRH-------PHTLLRTHTLNDAKHLMEALDIRHVPIVD--ANKKLLGIVSQRDLLAAQ 61 (160)
T ss_dssp CCBGGGTSEES-------CCCBCTTSBHHHHHHHHHHHTCSEEEEEC--TTCBEEEEEEHHHHHHHH
T ss_pred cCcHHHHhcCC-------CeEECCCCcHHHHHHHHHHcCCCEEEEEc--CCCcEEEEEeHHHHHHHH
Confidence 46789999875 88999999999999999999999999998 789999999999998764
No 50
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.96 E-value=8.6e-10 Score=76.16 Aligned_cols=62 Identities=13% Similarity=0.296 Sum_probs=52.8
Q ss_pred CcccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCC-CeeEEEEeHHHHHHHhh
Q 033339 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ-KSVAGIITERGIFKACH 120 (121)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~-~~lvGiVt~~Di~~~~~ 120 (121)
...+++++|++.. +++++++++++.+|++.|.+++++.+||++ ++ ++++|+||.+|+++++.
T Consensus 40 ~~~~v~diM~~~~-----~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd--~~~~~lvGivt~~dl~~~~~ 102 (172)
T 3lhh_A 40 DERTISSLMVPRS-----DIVFLDLNLPLDANLRTVMQSPHSRFPVCR--NNVDDMVGIISAKQLLSESI 102 (172)
T ss_dssp ---CTTTTSEEGG-----GCCCEETTSCHHHHHHHHHTCCCSEEEEES--SSTTSEEEEEEHHHHHHHHH
T ss_pred CCCCHHHhCccHH-----HeEEEcCCCCHHHHHHHHHhCCCCEEEEEe--CCCCeEEEEEEHHHHHHHHh
Confidence 4678999999432 288999999999999999999999999998 66 89999999999998754
No 51
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=98.96 E-value=9.4e-10 Score=75.20 Aligned_cols=58 Identities=21% Similarity=0.260 Sum_probs=53.3
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..++.++|.+. ++++.+++++.+|+++|.+++++.+||+| + |+++|+||.+|+++++.
T Consensus 92 ~~~v~~~m~~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVvd--~-g~~~Giit~~dil~~~~ 149 (165)
T 3fhm_A 92 QQSVSVAMTKN-------VVRCQHNSTTDQLMEIMTGGRFRHVPVEE--N-GRLAGIISIGDVVKARI 149 (165)
T ss_dssp TSBGGGTSBSS-------CCCBCTTCBHHHHHHHHHHHTCSEEEEEE--T-TEEEEEEEHHHHHHHTT
T ss_pred cCCHHHHhcCC-------CeEECCCCcHHHHHHHHHHcCCCEEEEEE--C-CEEEEEEEHHHHHHHHH
Confidence 56889999865 88999999999999999999999999998 6 99999999999998864
No 52
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.95 E-value=9.1e-10 Score=73.14 Aligned_cols=57 Identities=23% Similarity=0.282 Sum_probs=51.8
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
..++.++|.++ +.++.++ ++.+|++.|.+++++.+||+| ++|+++|+||.+|+++++
T Consensus 70 ~~~v~~~m~~~-------~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd--~~g~~~Giit~~dll~~~ 126 (141)
T 2rih_A 70 DGPAMPIANSP-------ITVLDTD-PVHVAAEKMRRHNIRHVVVVN--KNGELVGVLSIRDLCFER 126 (141)
T ss_dssp TSBSGGGCBCC-------CEEETTS-BHHHHHHHHHHHTCSEEEEEC--TTSCEEEEEEHHHHHSCH
T ss_pred CCCHHHHcCCC-------CeEEcCC-CHHHHHHHHHHcCCeEEEEEc--CCCcEEEEEEHHHHHHHH
Confidence 46788999875 8999999 999999999999999999998 789999999999998654
No 53
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.95 E-value=1.1e-09 Score=73.58 Aligned_cols=56 Identities=13% Similarity=0.324 Sum_probs=50.9
Q ss_pred CcccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHH
Q 033339 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFK 117 (121)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~ 117 (121)
...++.++|.+. +.++.+++++.+|++.|.+++++.+||+| ++ +++|+||.+|+++
T Consensus 93 ~~~~v~~~m~~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVvd--~~-~~~Giit~~dil~ 148 (149)
T 3k2v_A 93 RDASIADVMTRG-------GIRIRPGTLAVDALNLMQSRHITCVLVAD--GD-HLLGVVHMHDLLR 148 (149)
T ss_dssp TTCBHHHHSEES-------CCEECTTCBHHHHHHHHHHHTCSEEEEEE--TT-EEEEEEEHHHHTC
T ss_pred ccCcHHHHcCCC-------CeEECCCCCHHHHHHHHHHcCCCEEEEec--CC-EEEEEEEHHHhhc
Confidence 357899999875 78999999999999999999999999998 44 9999999999975
No 54
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.94 E-value=1.5e-09 Score=73.55 Aligned_cols=59 Identities=22% Similarity=0.307 Sum_probs=53.5
Q ss_pred CcccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
...++.++|.+ ++++++++++.+|+++|.+++++.+||+| ++|+++|+||.+|+++++.
T Consensus 94 ~~~~v~~im~~--------~~~v~~~~~l~~a~~~m~~~~~~~lpVvd--~~g~~vGiit~~dll~~l~ 152 (157)
T 1o50_A 94 IAKNASEIMLD--------PVYVHMDTPLEEALKLMIDNNIQEMPVVD--EKGEIVGDLNSLEILLALW 152 (157)
T ss_dssp SSCBHHHHCBC--------CCCBCTTSBHHHHHHHHHHHTCSEEEEEC--TTSCEEEEEEHHHHHHHHH
T ss_pred cCCcHHHHcCC--------CeEECCCCCHHHHHHHHHHCCCcEEEEEc--CCCEEEEEEEHHHHHHHHH
Confidence 35689999986 47899999999999999999999999998 7899999999999998864
No 55
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.94 E-value=1.1e-09 Score=73.40 Aligned_cols=57 Identities=21% Similarity=0.341 Sum_probs=51.7
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..++.++|.+. +.++.+++++.+|++.|.++++ +||+| ++|+++|+||.+|+++++.
T Consensus 86 ~~~v~~~m~~~-------~~~v~~~~~l~~a~~~~~~~~~--l~Vvd--~~g~~~Giit~~dil~~l~ 142 (150)
T 3lqn_A 86 EMKVEQVMKQD-------IPVLKLEDSFAKALEMTIDHPF--ICAVN--EDGYFEGILTRRAILKLLN 142 (150)
T ss_dssp GCBGGGTCBSS-------CCEEETTCBHHHHHHHHHHCSE--EEEEC--TTCBEEEEEEHHHHHHHHH
T ss_pred cCCHHHHhcCC-------CceeCCCCCHHHHHHHHHhCCE--EEEEC--CCCcEEEEEEHHHHHHHHH
Confidence 56788999865 8999999999999999999987 99998 7899999999999998864
No 56
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.93 E-value=3.1e-09 Score=68.69 Aligned_cols=55 Identities=20% Similarity=0.313 Sum_probs=50.6
Q ss_pred cHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 55 ~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
+++++|.++ +.++.+++++.+|++.|.+++.+.+||+| +|+++|+||.+|+++.+
T Consensus 2 ~v~~~m~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd---~~~~~G~it~~dl~~~~ 56 (125)
T 1pbj_A 2 RVEDVMVTD-------VDTIDITASLEDVLRNYVENAKGSSVVVK---EGVRVGIVTTWDVLEAI 56 (125)
T ss_dssp CHHHHCBCS-------CCEEETTCBHHHHHHHHHHHCCCEEEEEE---TTEEEEEEEHHHHHHHH
T ss_pred CHHHhcCCC-------ceEECCCCcHHHHHHHHHHcCCCEEEEEe---CCeeEEEEeHHHHHHHH
Confidence 688999875 89999999999999999999999999997 79999999999998764
No 57
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.93 E-value=1.5e-09 Score=73.26 Aligned_cols=60 Identities=17% Similarity=0.108 Sum_probs=52.6
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
..+++++|++.. ++.++.+++++.+|++.|.+++++.+||+| ++|+++|+||.+|+++++
T Consensus 14 ~~~v~dim~p~~-----~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd--~~~~~~Giit~~dl~~~~ 73 (156)
T 3ctu_A 14 LGQEETFLTPAK-----NLAVLIDTHNADHATLLLSQMTYTRVPVVT--DEKQFVGTIGLRDIMAYQ 73 (156)
T ss_dssp HTTGGGGEEEGG-----GCCCEETTSBHHHHHHHHTTCSSSEEEEEC--C-CBEEEEEEHHHHHHHH
T ss_pred HHHHHHHcCccc-----CceEECCCCCHHHHHHHHHHCCCceEeEEC--CCCEEEEEEcHHHHHHHH
Confidence 357899999532 289999999999999999999999999998 789999999999999875
No 58
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.93 E-value=2e-09 Score=74.82 Aligned_cols=59 Identities=27% Similarity=0.420 Sum_probs=53.7
Q ss_pred CcccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
...+++++|.+. ++++++++++.+|+++|.+++++.+||++ ++|+++|+||.+|+++.+
T Consensus 7 ~~~~v~~im~~~-------~~~v~~~~~l~ea~~~~~~~~~~~~pVvd--~~g~~vGivt~~dl~~~~ 65 (184)
T 1pvm_A 7 MFMRVEKIMNSN-------FKTVNWNTTVFDAVKIMNENHLYGLVVKD--DNGNDVGLLSERSIIKRF 65 (184)
T ss_dssp CCCBGGGTSBTT-------CCEEETTCBHHHHHHHHHHHTCCEEEEEC--TTSCEEEEEEHHHHHHHT
T ss_pred cccCHHHhcCCC-------CeEECCCCcHHHHHHHHHHcCCCEEEEEc--CCCcEEEEEeHHHHHHHH
Confidence 357899999875 89999999999999999999999999998 679999999999998864
No 59
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.92 E-value=2e-09 Score=70.91 Aligned_cols=58 Identities=19% Similarity=0.409 Sum_probs=52.5
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHH-HHHh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGI-FKAC 119 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di-~~~~ 119 (121)
..+++++|.++ +.++.+++++.+|++.|.+++.+.+||+| ++|+++|+||.+|+ .+.+
T Consensus 7 ~~~v~~im~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~~Givt~~dl~~~~~ 65 (138)
T 2p9m_A 7 NIKVKDVMTKN-------VITAKRHEGVVEAFEKMLKYKISSLPVID--DENKVIGIVTTTDIGYNLI 65 (138)
T ss_dssp TCBGGGTSBCS-------CCCEETTSBHHHHHHHHHHHTCCEEEEEC--TTCBEEEEEEHHHHHHHHT
T ss_pred cCCHHHhhcCC-------ceEECCCCcHHHHHHHHHHCCCcEEEEEC--CCCeEEEEEEHHHHHHHHH
Confidence 56889999875 88999999999999999999999999998 78999999999999 7654
No 60
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.92 E-value=2.1e-09 Score=72.99 Aligned_cols=57 Identities=23% Similarity=0.429 Sum_probs=52.1
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
..+++++|.+ ++++.+++++.+|++.|.+++++++||+| ++|+++|+||.+|+++++
T Consensus 16 ~~~v~~im~~--------~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd--~~~~~~Givt~~dl~~~~ 72 (159)
T 3fv6_A 16 KLQVKDFQSI--------PVVIHENVSVYDAICTMFLEDVGTLFVVD--RDAVLVGVLSRKDLLRAS 72 (159)
T ss_dssp TCBGGGSCBC--------CCEEETTSBHHHHHHHHHHHTCSEEEEEC--TTSCEEEEEEHHHHHHHH
T ss_pred hCCHHHHcCC--------CEEECCCCcHHHHHHHHHHCCCCEEEEEc--CCCcEEEEEeHHHHHHHh
Confidence 5689999985 35999999999999999999999999998 789999999999999865
No 61
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.92 E-value=1.6e-09 Score=73.21 Aligned_cols=61 Identities=16% Similarity=0.242 Sum_probs=53.2
Q ss_pred CcccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEE-eCCC-CCeeEEEEeHHHHHHHh
Q 033339 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVV-KPGE-QKSVAGIITERGIFKAC 119 (121)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVv-d~~~-~~~lvGiVt~~Di~~~~ 119 (121)
...+++++|++.. +++++.+++++.+|++.|.+++++++||+ + + +|+++|+||.+|+++++
T Consensus 18 ~~~~v~~iM~~~~-----~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d--~~~~~lvGivt~~dl~~~~ 80 (153)
T 3oco_A 18 NDKVASDVMVDRT-----SMSVVDVDETIADALLLYLEEQYSRFPVTAD--NDKDKIIGYAYNYDIVRQA 80 (153)
T ss_dssp HHCBHHHHSEEGG-----GCCCEETTSBHHHHHHHHHHHCCSEEEEEET--TEEEEEEEEEEHHHHHHHH
T ss_pred CCCEeeeEecchh-----heEEEcCCCCHHHHHHHHHhCCCCEEEEEEC--CCCCcEEEEEEHHHHHhHH
Confidence 3578999999621 28899999999999999999999999999 5 3 48999999999999875
No 62
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.91 E-value=2.3e-09 Score=70.72 Aligned_cols=58 Identities=14% Similarity=0.392 Sum_probs=53.1
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..++.++|.++ +.++++++++.+|++.|.+++++.+ |+| ++|+++|+||.+|+++++.
T Consensus 71 ~~~v~~~m~~~-------~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd--~~g~~~Giit~~dil~~~~ 128 (138)
T 2yzi_A 71 DIPVERIMTRN-------LITANVNTPLGEVLRKMAEHRIKHI-LIE--EEGKIVGIFTLSDLLEASR 128 (138)
T ss_dssp TSBGGGTCBCS-------CCEEETTSBHHHHHHHHHHHTCSEE-EEE--ETTEEEEEEEHHHHHHHHH
T ss_pred cCCHHHHhhCC-------CeEECCCCcHHHHHHHHHhcCCCEE-EEC--CCCCEEEEEEHHHHHHHHH
Confidence 56788999875 8999999999999999999999999 998 7899999999999998864
No 63
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=98.91 E-value=1.3e-09 Score=73.40 Aligned_cols=61 Identities=15% Similarity=0.174 Sum_probs=53.2
Q ss_pred CcccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
...+++++|.+.. +++++.+++++.+|++.|.+++++.+||+| ++|+++|+||.+|+++++
T Consensus 9 ~~~~v~~im~~~~-----~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd--~~~~~~Givt~~dl~~~~ 69 (157)
T 2emq_A 9 MQMTVKPFLIPAD-----KVAHVQPGNYLDHALLVLTKTGYSAIPVLD--TSYKLHGLISMTMMMDAI 69 (157)
T ss_dssp -CCBSTTTCEEGG-----GSCCBCTTSBHHHHHHHHHHSSSSEEEEEC--TTCCEEEEEEHHHHHHHS
T ss_pred hhCcHHhhccCCc-----cceEECCCCcHHHHHHHHHHCCceEEEEEc--CCCCEEEEeeHHHHHHHH
Confidence 3568899998611 278999999999999999999999999998 789999999999998864
No 64
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=98.91 E-value=1.5e-09 Score=75.55 Aligned_cols=61 Identities=16% Similarity=0.272 Sum_probs=53.9
Q ss_pred CcccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCC-CeeEEEEeHHHHHHHh
Q 033339 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ-KSVAGIITERGIFKAC 119 (121)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~-~~lvGiVt~~Di~~~~ 119 (121)
...+++++|++.. +++++.+++++.+|++.|.+++++.+||++ ++ ++++|+||.+|+++++
T Consensus 34 ~~~~v~diM~~~~-----~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd--~~~~~lvGivt~~Dl~~~~ 95 (173)
T 3ocm_A 34 AERSIRSIMTPRT-----DVSWVNIDDDAATIRQQLTAAPHSFFPVCR--GSLDEVVGIGRAKDLVADL 95 (173)
T ss_dssp TTSCSTTTSEEGG-----GCCCEETTSCHHHHHHHHHHSSCSEEEEES--SSTTSEEEEEEHHHHHHHH
T ss_pred CCCCHHHhCCcHH-----HeEEEeCCCCHHHHHHHHHhCCCCEEEEEe--CCCCCEEEEEEHHHHHHHH
Confidence 4678999998532 278999999999999999999999999998 55 8999999999999875
No 65
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=98.90 E-value=6.6e-09 Score=77.52 Aligned_cols=65 Identities=18% Similarity=0.297 Sum_probs=55.2
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..+++++|.+.+.. .++++++.+++++.+|+++|.+++++.+||+| ++|+++|+||.+|+++++.
T Consensus 255 ~~~v~~~m~~~~~~-~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd--~~~~l~Giit~~Dil~~l~ 319 (323)
T 3t4n_C 255 SLSVGEALMRRSDD-FEGVYTCTKNDKLSTIMDNIRKARVHRFFVVD--DVGRLVGVLTLSDILKYIL 319 (323)
T ss_dssp TSBHHHHGGGSCTT-CCCCEEECTTCBHHHHHHHHHHSCCCEEEEEC--TTSBEEEEEEHHHHHHHHH
T ss_pred cCCHHHHHhhcccc-CCCCEEECCCCCHHHHHHHHHHhCCCEEEEEC--CCCcEEEEEEHHHHHHHHH
Confidence 45799999973100 01289999999999999999999999999998 7899999999999999874
No 66
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=98.90 E-value=1.8e-09 Score=78.52 Aligned_cols=58 Identities=28% Similarity=0.460 Sum_probs=52.9
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
..++.++|.++ ++++++++++.+|++.|.+++++.+||+| ++|+++|+||.+|+++++
T Consensus 222 ~~~v~~~m~~~-------~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd--~~g~~~Givt~~dil~~l 279 (280)
T 3kh5_A 222 NVRMEEIMKRD-------VITAKEGDKLKKIAEIMVTNDIGALPVVD--ENLRIKGIITEKDVLKYF 279 (280)
T ss_dssp HCBHHHHSBSS-------CCCBCTTCBHHHHHHHHHHHTCCEEEEEC--TTCBEEEEEEHHHHGGGG
T ss_pred CCcHHHHhcCC-------CEEECCCCCHHHHHHHHHHCCCCEEEEEC--CCCeEEEEEeHHHHHHhh
Confidence 35788888765 89999999999999999999999999998 788999999999999875
No 67
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.90 E-value=3.7e-09 Score=69.29 Aligned_cols=57 Identities=35% Similarity=0.536 Sum_probs=51.9
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
..+++++|.++ +.++.+++++.+|++.|.+++.+.+||+| +|+++|+||.+|+.+.+
T Consensus 3 ~~~v~~im~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd---~~~~~Givt~~dl~~~~ 59 (133)
T 2ef7_A 3 EEIVKEYMKTQ-------VISVTKDAKLNDIAKVMTEKNIGSVIVVD---GNKPVGIITERDIVKAI 59 (133)
T ss_dssp CCBGGGTSBCS-------CCEEETTCBHHHHHHHHHHHTCSEEEEEE---TTEEEEEEEHHHHHHHH
T ss_pred cccHHHhccCC-------CEEECCCCcHHHHHHHHHhcCCCEEEEEE---CCEEEEEEcHHHHHHHH
Confidence 46788999875 88999999999999999999999999997 68999999999998765
No 68
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.90 E-value=2.1e-09 Score=76.83 Aligned_cols=58 Identities=16% Similarity=0.257 Sum_probs=53.1
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
..+++++|.++ ++++.+++++.+|+++|.+++++.+||+| ++|+++|+||.+|+++.+
T Consensus 71 ~~~v~~im~~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVvd--~~g~lvGiit~~Dil~~~ 128 (213)
T 1vr9_A 71 DSSVFNKVSLP-------DFFVHEEDNITHALLLFLEHQEPYLPVVD--EEMRLKGAVSLHDFLEAL 128 (213)
T ss_dssp TSBSGGGCBCT-------TCCEETTSBHHHHHHHHHHCCCSEEEEEC--TTCBEEEEEEHHHHHHHH
T ss_pred CCcHHHHccCC-------CEEECCCCcHHHHHHHHHHhCCCEEEEEc--CCCEEEEEEEHHHHHHHH
Confidence 45789999875 88999999999999999999999999998 679999999999999875
No 69
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.89 E-value=6.8e-09 Score=68.27 Aligned_cols=58 Identities=34% Similarity=0.638 Sum_probs=50.3
Q ss_pred ccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHH
Q 033339 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKA 118 (121)
Q Consensus 54 ~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~ 118 (121)
.+++++|.+... +++++++++++.+|++.|.+++.+++||+| +|+++|+||.+|+++.
T Consensus 6 ~~v~~im~~~~~----~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd---~~~~~Givt~~dl~~~ 63 (135)
T 2rc3_A 6 KTVKHLLQEKGH----TVVAIGPDDSVFNAMQKMAADNIGALLVMK---DEKLVGILTERDFSRK 63 (135)
T ss_dssp CBHHHHHHHHCC----CCCEECTTSBHHHHHHHHHHHTCSEEEEEE---TTEEEEEEEHHHHHHH
T ss_pred eeHHHHHhcCCC----CcEEECCCCcHHHHHHHHHhcCCCEEEEEE---CCEEEEEEehHHHHHH
Confidence 389999983100 289999999999999999999999999997 7899999999999863
No 70
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=98.89 E-value=9.8e-10 Score=74.64 Aligned_cols=61 Identities=13% Similarity=0.223 Sum_probs=53.6
Q ss_pred CcccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCC-CeeEEEEeHHHHHHHh
Q 033339 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ-KSVAGIITERGIFKAC 119 (121)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~-~~lvGiVt~~Di~~~~ 119 (121)
...+++++|++.. +++++++++++.+|++.|.+++++++||++ ++ ++++|+||.+|+++++
T Consensus 36 ~~~~v~diM~~~~-----~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd--~~~~~lvGivt~~dl~~~~ 97 (156)
T 3oi8_A 36 SDLEVRDAMITRS-----RMNVLKENDSIERITAYVIDTAHSRFPVIG--EDKDEVLGILHAKDLLKYM 97 (156)
T ss_dssp TTCBGGGTCEEGG-----GCCCEETTCCHHHHHHHHHHHCCSEEEEES--SSTTCEEEEEEGGGGGGGS
T ss_pred CCCCHhheeeeHH-----HeEEECCCCCHHHHHHHHHHCCCCEEEEEc--CCCCcEEEEEEHHHHHHHH
Confidence 4678999999732 288999999999999999999999999998 56 5999999999998764
No 71
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=98.89 E-value=1.6e-09 Score=71.05 Aligned_cols=56 Identities=29% Similarity=0.456 Sum_probs=51.1
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHH
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFK 117 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~ 117 (121)
..+++++|.++ +.++.+++++.+|++.|.+++.+.+||+| ++|+++|+||.+|+++
T Consensus 7 ~~~v~~im~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~~Givt~~dl~~ 62 (133)
T 1y5h_A 7 MTTARDIMNAG-------VTCVGEHETLTAAAQYMREHDIGALPICG--DDDRLHGMLTDRDIVI 62 (133)
T ss_dssp -CCHHHHSEET-------CCCEETTSBHHHHHHHHHHHTCSEEEEEC--GGGBEEEEEEHHHHHH
T ss_pred hcCHHHHhcCC-------ceEeCCCCCHHHHHHHHHHhCCCeEEEEC--CCCeEEEEEeHHHHHH
Confidence 35899999875 88999999999999999999999999998 6899999999999984
No 72
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=98.89 E-value=3.5e-09 Score=71.88 Aligned_cols=54 Identities=15% Similarity=0.296 Sum_probs=49.4
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHH
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIF 116 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~ 116 (121)
..++.++|++ ++++.+++++.+|++.|.+++++.+||+| ++|+++|+||.+|++
T Consensus 102 ~~~v~~im~~--------~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd--~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 102 QFHLKSILRP--------AVFVPEGKSLTALLKEFREQRNHMAIVID--EYGGTSGLVTFEDII 155 (156)
T ss_dssp GCCHHHHCBC--------CCEEETTSBHHHHHHHHHHTTCCEEEEEC--TTSSEEEEEEHHHHC
T ss_pred cccHHHHcCC--------CEEECCCCCHHHHHHHHHhcCCeEEEEEC--CCCCEEEEEEHHHhc
Confidence 4678899954 68999999999999999999999999998 789999999999985
No 73
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.88 E-value=3.4e-09 Score=71.73 Aligned_cols=59 Identities=14% Similarity=0.272 Sum_probs=53.1
Q ss_pred CCcccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCE-EEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGA-LVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 51 ~~~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~-lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
+...+++++|+++ ++++.+++++.+|++.|.+++++. +||+| ++ +++|+||.+|+++++
T Consensus 13 ~~~~~v~~im~~~-------~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd--~~-~~vGivt~~dl~~~~ 72 (157)
T 1o50_A 13 MKVKDVCKLISLK-------PTVVEEDTPIEEIVDRILEDPVTRTVYVAR--DN-KLVGMIPVMHLLKVS 72 (157)
T ss_dssp CBHHHHTTSSCCC-------CEEECTTCBHHHHHHHHHHSTTCCEEEEEE--TT-EEEEEEEHHHHHHHH
T ss_pred hccccHhhcccCC-------CceECCCCCHHHHHHHHHhCCCCccEEEEE--CC-EEEEEEEHHHHHHHH
Confidence 3456889999875 899999999999999999999999 99998 66 999999999999864
No 74
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=98.88 E-value=2.9e-09 Score=72.91 Aligned_cols=58 Identities=16% Similarity=0.361 Sum_probs=51.9
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHH
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFK 117 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~ 117 (121)
..+++++|.+.. +++++.+++++.+|++.|.+++++++||+| ++++++|+||.+|+++
T Consensus 3 ~~~v~dim~~~~-----~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd--~~~~~~Givt~~dl~~ 60 (180)
T 3sl7_A 3 GYTVGDFMTPRQ-----NLHVVKPSTSVDDALELLVEKKVTGLPVID--DNWTLVGVVSDYDLLA 60 (180)
T ss_dssp CCBHHHHSEEGG-----GCCCBCTTSBHHHHHHHHHHHTCSEEEEEC--TTCBEEEEEEHHHHTC
T ss_pred ceeHHHhcCCCC-----CceeeCCCCcHHHHHHHHHHcCCCeEEEEC--CCCeEEEEEEHHHHHh
Confidence 367999999831 188999999999999999999999999998 7899999999999974
No 75
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=98.87 E-value=3.8e-09 Score=77.97 Aligned_cols=59 Identities=24% Similarity=0.447 Sum_probs=54.1
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..++.++|.++ ++++.+++++.+|+++|.+++++.+||+| ++|+++|+||.+|+++++.
T Consensus 226 ~~~v~~~m~~~-------~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd--~~g~~~Giit~~Dil~~l~ 284 (296)
T 3ddj_A 226 GKVVKDVMVTN-------LVTIDELASVNRAAAEMIVKRIGSLLILN--KDNTIRGIITERDLLIALH 284 (296)
T ss_dssp TCBHHHHSBCC-------CCBCCTTSBHHHHHHHHHHHTCSEEEEEC--TTSCEEEEEEHHHHHHHHH
T ss_pred CcCHHHHhCCC-------CeEECCCCcHHHHHHHHHHcCCCEEEEEC--CCCeEEEEEcHHHHHHHHH
Confidence 45788888875 89999999999999999999999999998 7899999999999999864
No 76
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.87 E-value=2.7e-09 Score=71.01 Aligned_cols=58 Identities=14% Similarity=0.314 Sum_probs=51.9
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHH
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFK 117 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~ 117 (121)
..+++++|.+.. +++++.+++++.+|++.|.+++++++||+| ++++++|+||.+|+++
T Consensus 4 ~~~v~~im~~~~-----~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~~G~vt~~dl~~ 61 (152)
T 4gqw_A 4 VYTVGEFMTKKE-----DLHVVKPTTTVDEALELLVENRITGFPVID--EDWKLVGLVSDYDLLA 61 (152)
T ss_dssp CSBGGGTSEEST-----TCCCBCTTSBHHHHHHHHHHTTCSEEEEEC--TTCBEEEEEEHHHHTT
T ss_pred eEEhhhccCCCC-----CCeEECCCCcHHHHHHHHHHcCCceEEEEe--CCCeEEEEEEHHHHHH
Confidence 467899998831 288999999999999999999999999998 7899999999999974
No 77
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=98.86 E-value=4.5e-09 Score=78.50 Aligned_cols=59 Identities=22% Similarity=0.292 Sum_probs=54.1
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..++.++|.++ ++++++++++.+|++.|.++++..+||+| ++|+++|+||.+|++..+.
T Consensus 200 ~~~v~~im~~~-------~~~v~~~~~l~ea~~~m~~~~~~~lpVVd--~~g~lvGiIT~~Dil~~i~ 258 (286)
T 2oux_A 200 DTLIADILNER-------VISVHVGDDQEDVAQTIRDYDFLAVPVTD--YDDHLLGIVTVDDIIDVID 258 (286)
T ss_dssp TSBHHHHSBSC-------CCCEETTSBHHHHHHHHHHHTCSEEEEEC--TTCBEEEEEEHHHHHHHHH
T ss_pred CCcHHHHcCCC-------CeeecCCCCHHHHHHHHHHcCCcEEEEEc--CCCeEEEEEEHHHHHHHHH
Confidence 56799999875 88999999999999999999999999998 7899999999999998753
No 78
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=98.86 E-value=3.7e-09 Score=71.14 Aligned_cols=57 Identities=21% Similarity=0.367 Sum_probs=51.2
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..++.++|.+. +.++.+++++.+|++.|.++++ +||+| ++|+++|+||.+|+++++.
T Consensus 82 ~~~v~~~m~~~-------~~~v~~~~~l~~a~~~m~~~~~--l~Vvd--~~g~~~Giit~~dil~~~~ 138 (157)
T 2emq_A 82 TMKVEEVMNRN-------IPRLRLDDSLMKAVGLIVNHPF--VCVEN--DDGYFAGIFTRREVLKQLN 138 (157)
T ss_dssp TCBGGGTCBCC-------CCEEETTSBHHHHHHHHHHSSE--EEEEC--SSSSEEEEEEHHHHHHHHH
T ss_pred CCcHHHHhCCC-------CceecCCCcHHHHHHHHhhCCE--EEEEc--CCCeEEEEEEHHHHHHHHH
Confidence 46788888875 8999999999999999999988 99998 7899999999999998764
No 79
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=98.85 E-value=4.1e-09 Score=72.61 Aligned_cols=58 Identities=17% Similarity=0.202 Sum_probs=52.9
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..++.++|.+. ++++.+++++.+|+++|.+++++.+||++ +|+++|+||.+|+++++.
T Consensus 107 ~~~v~~im~~~-------~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd---~g~~vGiit~~dll~~l~ 164 (185)
T 2j9l_A 107 TLKLRNILDLS-------PFTVTDLTPMEIVVDIFRKLGLRQCLVTH---NGRLLGIITKKDVLKHIA 164 (185)
T ss_dssp CEECGGGEESS-------CCEEETTSBHHHHHHHHHHHTCSEEEEEE---TTEEEEEEEHHHHHHHHH
T ss_pred CccHHHhhCcC-------CeEeCCCCCHHHHHHHHHhCCCcEEEEEE---CCEEEEEEEHHHHHHHHH
Confidence 45788999875 89999999999999999999999999997 799999999999998764
No 80
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=98.85 E-value=5.5e-09 Score=70.73 Aligned_cols=58 Identities=14% Similarity=0.303 Sum_probs=52.2
Q ss_pred CcccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
...++.++|.+. +.++.+++++.+|+++|.++++ +||+| ++|+++|+||.+|+++++.
T Consensus 84 ~~~~v~~~m~~~-------~~~v~~~~~l~~a~~~m~~~~~--lpVvd--~~g~~vGiit~~dil~~~~ 141 (159)
T 1yav_A 84 DQITVEEVMLTD-------IPRLHINDPIMKGFGMVINNGF--VCVEN--DEQVFEGIFTRRVVLKELN 141 (159)
T ss_dssp TTSBHHHHSBCS-------CCEEETTSBHHHHHHHTTTCSE--EEEEC--TTCBEEEEEEHHHHHHHHH
T ss_pred ccCCHHHhcCCC-------CceEcCCCCHHHHHHHHHhCCE--EEEEe--CCCeEEEEEEHHHHHHHHH
Confidence 357899999975 8999999999999999999987 99998 7899999999999998764
No 81
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.85 E-value=2e-09 Score=72.62 Aligned_cols=57 Identities=26% Similarity=0.356 Sum_probs=51.2
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..++.++|.++ ++++.+++++.+|++.|.+++ .+||+| ++|+++|+||.+|+++++.
T Consensus 85 ~~~v~~~m~~~-------~~~v~~~~~l~~a~~~~~~~~--~lpVvd--~~g~~~Giit~~dil~~l~ 141 (156)
T 3ctu_A 85 DTDIVHMTKTD-------VAVVSPDFTITEVLHKLVDES--FLPVVD--AEGIFQGIITRKSILKAVN 141 (156)
T ss_dssp TSBGGGGCBCS-------CCCBCSSCCHHHHHHHTTTSS--EEEEEC--TTSBEEEEEETTHHHHHHH
T ss_pred cCcHHHhccCC-------ceeeCCCCcHHHHHHHHHHcC--eEEEEc--CCCeEEEEEEHHHHHHHHH
Confidence 56788999865 889999999999999999886 799998 7899999999999998864
No 82
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.84 E-value=2.8e-09 Score=74.08 Aligned_cols=58 Identities=17% Similarity=0.223 Sum_probs=52.7
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
..++.++|.++ +.++.+++++.+|+++|.+++.+.+||+| ++|+++|+||.+|+++++
T Consensus 74 ~~~v~~im~~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVvd--~~g~~~Givt~~dll~~~ 131 (184)
T 1pvm_A 74 EVPIRLVMRKP-------IPKVKSDYDVKDVAAYLSENGLERCAVVD--DPGRVVGIVTLTDLSRYL 131 (184)
T ss_dssp GSBGGGTSBSS-------CCEEETTCBHHHHHHHHHHHTCSEEEEEC--TTCCEEEEEEHHHHTTTS
T ss_pred cCCHHHHhCCC-------CcEECCCCCHHHHHHHHHHcCCcEEEEEc--CCCeEEEEEEHHHHHHHH
Confidence 46788999875 88999999999999999999999999998 679999999999998764
No 83
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=98.84 E-value=5.2e-09 Score=72.70 Aligned_cols=49 Identities=12% Similarity=0.217 Sum_probs=46.1
Q ss_pred ceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 70 ~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
+++++.+++++.+|+++|.+++++.+||+| ++|+++||||.+|+++.+.
T Consensus 108 ~~~~v~~~~~l~~al~~m~~~~~~~~~Vvd--e~g~lvGiIT~~Dil~~l~ 156 (173)
T 3ocm_A 108 DPIIVHESIGILRLMDTLKRSRGQLVLVAD--EFGAIEGLVTPIDVFEAIA 156 (173)
T ss_dssp CCCEECGGGCHHHHHHHHHHSTTCCEEEEC--TTCCEEEEECHHHHHHHHH
T ss_pred CCeEECCCCcHHHHHHHHHHcCCeEEEEEe--CCCCEEEEEeHHHHHHHHh
Confidence 378999999999999999999999999998 7899999999999998864
No 84
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=98.84 E-value=4.3e-09 Score=69.51 Aligned_cols=58 Identities=17% Similarity=0.301 Sum_probs=50.7
Q ss_pred cccHHH---HhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 53 STTISD---ILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 53 ~~~v~d---im~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
..++++ +|.++ ++++.+++++.+|++.|.+++++.+||+| ++|+++|+||.+|+++++
T Consensus 7 ~~~v~~~~~~~~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~~Givt~~dl~~~~ 67 (144)
T 2nyc_A 7 KIPIGDLNIITQDN-------MKSCQMTTPVIDVIQMLTQGRVSSVPIID--ENGYLINVYEAYDVLGLI 67 (144)
T ss_dssp GSBGGGSSCCBCSS-------CCCBCTTSBHHHHHHHHHHHTCSEEEEEC--TTCBEEEEEEHHHHHHHH
T ss_pred hcchhhcCCCCCCC-------ceEECCCCcHHHHHHHHHHcCcceeeEEc--CCCcEEEEEcHHHHHHHh
Confidence 345667 56543 88999999999999999999999999998 789999999999998865
No 85
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.83 E-value=1.3e-08 Score=68.64 Aligned_cols=62 Identities=42% Similarity=0.623 Sum_probs=52.1
Q ss_pred ccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 54 ~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
.+++|+|.+++.. .+++.++.+++++.+|++.|.+++++++||+ ++|+++|+||.+|+++++
T Consensus 7 ~~v~dim~~~~~~-~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~---~~~~~~Givt~~dl~~~~ 68 (157)
T 4fry_A 7 TTVAQILKAKPDS-GRTIYTVTKNDFVYDAIKLMAEKGIGALLVV---DGDDIAGIVTERDYARKV 68 (157)
T ss_dssp CBHHHHHHHSTTT-TCCCCEEETTSBHHHHHHHHHHHTCSEEEEE---SSSSEEEEEEHHHHHHHS
T ss_pred HHHHHHHhccccc-CCCCeEECCCCcHHHHHHHHHHcCCCEEEEe---eCCEEEEEEEHHHHHHHH
Confidence 5799999975200 0027899999999999999999999999995 489999999999999875
No 86
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=98.82 E-value=3.2e-09 Score=78.72 Aligned_cols=59 Identities=22% Similarity=0.389 Sum_probs=51.5
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..+++++|.++ ++++++++++.+|++.|.++++..+||+| ++|+++|+||..|+++.+.
T Consensus 198 ~~~v~~im~~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVvd--~~g~lvGivT~~Dil~~i~ 256 (278)
T 2yvy_A 198 RTRVAEIMNPK-------VVYVRTDTDQEEVARLMADYDFTVLPVVD--EEGRLVGIVTVDDVLDVLE 256 (278)
T ss_dssp TCBSTTTSBSS-------CCCEETTSBHHHHHHHHHHHTCSEEEEEC--TTSBEEEEEEHHHHHHHC-
T ss_pred CCcHHHHhCCC-------CeEEeCCCCHHHHHHHHHhcCCCEEEEEe--CCCeEEEEEEHHHHHHHHH
Confidence 34566777654 89999999999999999999999999998 7899999999999998753
No 87
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=98.80 E-value=1.8e-08 Score=75.48 Aligned_cols=65 Identities=17% Similarity=0.253 Sum_probs=54.0
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..++.++|.+..... ++++++++++++.+|+++|.+++++.+||+| ++|+++|+||.+|+++++.
T Consensus 250 ~~~v~~~m~~~~~~~-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd--~~g~l~Giit~~dil~~~~ 314 (334)
T 2qrd_G 250 DLSVGEALLKRPANF-DGVHTCRATDRLDGIFDAIKHSRVHRLFVVD--ENLKLEGILSLADILNYII 314 (334)
T ss_dssp GSBHHHHHTTCCTTC-CCCCEECTTCBHHHHHHHHHHSCCCEEEEEC--TTCBEEEEEEHHHHHHHHH
T ss_pred cCcHHHHHhcccccC-CCCEEECCCCcHHHHHHHHHHcCCCEEEEEC--CCCeEEEEEeHHHHHHHHH
Confidence 457889998510000 0288999999999999999999999999998 7899999999999998864
No 88
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=98.78 E-value=2.3e-08 Score=67.44 Aligned_cols=63 Identities=19% Similarity=0.155 Sum_probs=52.9
Q ss_pred cccHHHHhhhcCCCCCCc-eEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGS-WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~-~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..++.++|..... ..+ +.++++++++.+|+++|.+++++++||+| +|+++|+||.+|+++++.
T Consensus 83 ~~~v~~~m~~~~~--~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd---~g~l~Giit~~dil~~~~ 146 (164)
T 2pfi_A 83 QQCLQDILARGCP--TEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS---RGRAVGCVSWVEMKKAIS 146 (164)
T ss_dssp CCBHHHHHHTTCC--CBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE---TTEEEEEEEHHHHHHHHH
T ss_pred cchhhhhhccccc--ccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE---CCEEEEEEEHHHHHHHHH
Confidence 3579999987411 001 57899999999999999999999999997 689999999999998764
No 89
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=98.77 E-value=1.4e-08 Score=69.82 Aligned_cols=62 Identities=19% Similarity=0.306 Sum_probs=53.1
Q ss_pred cccHHHHhhhcCCCCCCceEEE--cCCCcHHHHHHHHHhcCCCEEEEE--eCCCCCeeEEEEeHHHHHHHh
Q 033339 53 STTISDILKAKGKGADGSWLWC--TTDDTVYDAVKSMTQHNVGALVVV--KPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v--~~~~~l~ea~~~m~~~~~~~lpVv--d~~~~~~lvGiVt~~Di~~~~ 119 (121)
..+++++|.+... .|++++ .+++++.+|++.|.+++++.+||+ | ++|+++|+||.+|+++.+
T Consensus 10 ~~~v~dim~~~~~---~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d--~~~~lvGiit~~dl~~~~ 75 (185)
T 2j9l_A 10 KTLAMDVMKPRRN---DPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSR--ESQRLVGFVLRRDLIISI 75 (185)
T ss_dssp CCBHHHHSBSCTT---SCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCT--TTCBEEEEEEHHHHHHHH
T ss_pred cCcHHHHhccccc---CceEEEecCCCccHHHHHHHHHhcCCCceeEEEEC--CCCeEEEEEEHHHHHHHH
Confidence 5789999987511 015677 999999999999999999999999 6 789999999999998874
No 90
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=98.74 E-value=4.9e-08 Score=73.06 Aligned_cols=65 Identities=23% Similarity=0.337 Sum_probs=55.2
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..++.++|... ..|+.+++++.+++++.+|+++|.+++++.+||+| ++|+++|+||.+|+++++.
T Consensus 258 ~~~v~~~~~~~-~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd--~~g~l~Giit~~Dil~~~~ 322 (330)
T 2v8q_E 258 DVSVTKALQHR-SHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVD--EHDVVKGIVSLSDILQALV 322 (330)
T ss_dssp SSBHHHHGGGC-CSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEEC--TTSBEEEEEEHHHHHHHHH
T ss_pred cCcHHHHHhcc-ccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEc--CCCcEEEEEeHHHHHHHHH
Confidence 46899999631 11223489999999999999999999999999998 7899999999999999875
No 91
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=98.73 E-value=1.4e-08 Score=75.07 Aligned_cols=49 Identities=10% Similarity=0.050 Sum_probs=45.9
Q ss_pred CceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 69 GSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 69 ~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
+.++++.+++++.+|..+|...+++.+||++ .|+|+||||++|+++++.
T Consensus 197 ~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~---~GrLVGIVTrkDl~kai~ 245 (250)
T 2d4z_A 197 QSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS---MGKLVGVVALAEIQAAIE 245 (250)
T ss_dssp CCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE---TTEEEEEEEHHHHHHHHH
T ss_pred CCCeEECCCCcHHHHHHHHHHhCCeEEEEEE---CCEEEEEEEHHHHHHHHH
Confidence 3489999999999999999999999999997 799999999999999875
No 92
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=98.72 E-value=1.8e-08 Score=73.15 Aligned_cols=58 Identities=19% Similarity=0.434 Sum_probs=53.1
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
..+++++|.++ +.++.+++++.+|++.|.+++++.+||+| ++|+++|++|.+|+++.+
T Consensus 83 ~~~v~~im~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~~Givt~~dl~~~~ 140 (280)
T 3kh5_A 83 NEPVREIMEEN-------VITLKENADIDEAIETFLTKNVGGAPIVN--DENQLISLITERDVIRAL 140 (280)
T ss_dssp TSBGGGTSBCS-------CCCEETTCBHHHHHHHHHHTTCSEEEEEC--TTCBEEEEEEHHHHHHHH
T ss_pred hhhHHHhcCCC-------CEEECCCCCHHHHHHHHHhCCCCEEEEEc--CCCEEEEEEEHHHHHHHH
Confidence 45788999875 88999999999999999999999999998 789999999999999875
No 93
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=98.71 E-value=1.7e-08 Score=81.20 Aligned_cols=71 Identities=25% Similarity=0.284 Sum_probs=60.9
Q ss_pred chhhhhhcCC-----------CcccHHHHhhhcCCCCCCceEEEcCC-CcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEE
Q 033339 42 SSARMEEHGF-----------ESTTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGI 109 (121)
Q Consensus 42 ~~~~~~~~g~-----------~~~~v~dim~~~~~~~~~~~~~v~~~-~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGi 109 (121)
.+.|+..++| ...+|+++|+++ ++++.++ +++.+|+++|.+++++.+||+|+ ++++++|+
T Consensus 361 ~~~~l~~rg~~~~~~~~~~~l~~~~V~diM~~~-------~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~-~~g~lvGi 432 (527)
T 3pc3_A 361 SDNWMEARNFKEPVNEHGHWWWSLAIAELELPA-------PPVILKSDATVGEAIALMKKHRVDQLPVVDQ-DDGSVLGV 432 (527)
T ss_dssp SHHHHHHTTSSCCCCTTCCTTTTSBGGGGCCCC-------CSCCEETTCBHHHHHHHHHHHTCSEEEEECT-TTCCEEEE
T ss_pred cHHHHHhcCCccccccccccccCCcHHHhCcCC-------CeEEcCCCCcHHHHHHHHHHcCCCeEEEEEC-CCCEEEEE
Confidence 4678888777 146899999875 8899999 99999999999999999999962 26899999
Q ss_pred EeHHHHHHHhh
Q 033339 110 ITERGIFKACH 120 (121)
Q Consensus 110 Vt~~Di~~~~~ 120 (121)
||.+|+++++.
T Consensus 433 Vt~~Dll~~l~ 443 (527)
T 3pc3_A 433 VGQETLITQIV 443 (527)
T ss_dssp EEHHHHHHHHH
T ss_pred EEHHHHHHHHH
Confidence 99999998753
No 94
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=98.70 E-value=3.4e-08 Score=66.37 Aligned_cols=48 Identities=29% Similarity=0.335 Sum_probs=44.9
Q ss_pred eEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 71 WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 71 ~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
+.++.+++++.+|++.|.+++++.+||+| ++|+++|+||.+|+++.+.
T Consensus 31 ~~~v~~~~~~~~a~~~m~~~~~~~~pVvd--~~~~~vGivt~~dl~~~~~ 78 (152)
T 2uv4_A 31 IAMVRTTTPVYVALGIFVQHRVSALPVVD--EKGRVVDIYSKFDVINLAA 78 (152)
T ss_dssp CCCEETTCBHHHHHHHHHHHCCSEEEEEC--TTSBEEEEEEHHHHHHHHH
T ss_pred ceEeCCCCcHHHHHHHHHHcCCceEeEEC--CCCcEEEEEeHHHHHHHhc
Confidence 78999999999999999999999999998 7899999999999988653
No 95
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=98.69 E-value=2.2e-08 Score=79.90 Aligned_cols=59 Identities=22% Similarity=0.389 Sum_probs=53.0
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..+++++|+++ ++++++++++.+|++.|.+++...+||+| ++|+++|+||.+|+++.+.
T Consensus 218 ~~~v~dim~~~-------~~~v~~~~~l~ea~~~m~~~~~~~lpVVD--e~g~lvGiIT~~Dil~~i~ 276 (473)
T 2zy9_A 218 RTRVAEIMNPK-------VVYVRTDTDQEEVARLMADYDFTVLPVVD--EEGRLVGIVTVDDVLDVLE 276 (473)
T ss_dssp TSBGGGTSBSS-------CCCEESSSBHHHHHHHHHHHTCSEEEEEC--TTSBEEEEEEHHHHHHHHH
T ss_pred CCcHHHHhCCC-------CeEEeCCCcHHHHHHHHHhcCCcEEEEEc--CCCEEEEEEehHhhHHHHH
Confidence 45777888654 89999999999999999999999999999 8899999999999998753
No 96
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=98.67 E-value=4e-08 Score=72.41 Aligned_cols=59 Identities=20% Similarity=0.198 Sum_probs=53.6
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..++.++|.++ +.++.+++++.+|++.|.+++++.+||+| ++|+++|+||.+|+++.+.
T Consensus 155 ~~~v~~~m~~~-------~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd--~~~~~~Givt~~dl~~~~~ 213 (296)
T 3ddj_A 155 IFPVKVFMSTK-------VQTIYKEVRLDQAVKLMLRRGFRRLPVID--DDNKVVGIVTVVNAIKQLA 213 (296)
T ss_dssp CCBHHHHSBCS-------CCCEETTSBHHHHHHHHHHHTCSEEEEEC--TTSCEEEEEEHHHHHHHHH
T ss_pred cccHHHhhcCC-------CeEECCCCCHHHHHHHHHHcCCCEEEEEc--CCCEEEEEEEHHHHHHHHH
Confidence 45889999865 88999999999999999999999999998 7899999999999988753
No 97
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=98.66 E-value=2.7e-08 Score=74.20 Aligned_cols=59 Identities=15% Similarity=0.293 Sum_probs=52.2
Q ss_pred cccHHHH---hhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDI---LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~di---m~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..+++++ |.++ ++++.+++++.+|++.|.+++++++||+| ++|+++|+||.+|+++++.
T Consensus 186 ~~~v~~~~~~m~~~-------~~~v~~~~~~~~~~~~m~~~~~~~~pVvd--~~~~~~Giit~~dl~~~~~ 247 (323)
T 3t4n_C 186 KIPIGDLNIITQDN-------MKSCQMTTPVIDVIQMLTQGRVSSVPIID--ENGYLINVYEAYDVLGLIK 247 (323)
T ss_dssp CSBGGGTTCSBCTT-------CCCBCTTSBHHHHHHHHHHHTCSEEEEEC--TTCBEEEEEETTHHHHHHH
T ss_pred hCcHHHcCCCCCCC-------cEEECCCCcHHHHHHHHHHcCCCEEEEEC--CCCeEEEEEeHHHHHHHHh
Confidence 3467787 6554 89999999999999999999999999998 7899999999999998753
No 98
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=98.65 E-value=5e-08 Score=69.62 Aligned_cols=60 Identities=20% Similarity=0.249 Sum_probs=53.5
Q ss_pred CCCcccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhc---CCCEEEEEeCCCCCeeEEEEeHHHHHHH
Q 033339 50 GFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQH---NVGALVVVKPGEQKSVAGIITERGIFKA 118 (121)
Q Consensus 50 g~~~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~---~~~~lpVvd~~~~~~lvGiVt~~Di~~~ 118 (121)
+|...+++++|++. ++++.++.|+.+|++.|.++ ++..+||+| ++++++|+||.+|++.+
T Consensus 50 ~~~~~~v~~iM~~~-------~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd--~~~~lvGivt~~dll~~ 112 (205)
T 3kxr_A 50 QYSENEIGRYTDHQ-------MLVLSDKATVAQAQRFFRRIELDCNDNLFIVD--EADKYLGTVRRYDIFKH 112 (205)
T ss_dssp HSCTTCGGGGCBCC-------CCEEETTCBHHHHHHHHHHCCCTTCCEEEEEC--TTCBEEEEEEHHHHTTS
T ss_pred CCCcchHHhhccCc-------eEEECCCCcHHHHHHHHHhhCccCeeEEEEEc--CCCeEEEEEEHHHHHhC
Confidence 34567899999876 89999999999999999987 899999998 78999999999998753
No 99
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=98.62 E-value=5.9e-08 Score=72.40 Aligned_cols=60 Identities=18% Similarity=0.354 Sum_probs=53.3
Q ss_pred CCCcccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhc-----CCCEEEEEeCCCCCeeEEEEeHHHHHHH
Q 033339 50 GFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQH-----NVGALVVVKPGEQKSVAGIITERGIFKA 118 (121)
Q Consensus 50 g~~~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~-----~~~~lpVvd~~~~~~lvGiVt~~Di~~~ 118 (121)
.+...+++++|++. ++++.++.++.+|++.|.++ +++.+||+| ++|+++|+||.+|++.+
T Consensus 133 ~~~~~~v~~iM~~~-------~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd--~~~~lvGivt~~dll~~ 197 (286)
T 2oux_A 133 HYEDETAGAIMTTE-------FVSIVANQTVRSAMYVLKNQADMAETIYYVYVVD--QENHLVGVISLRDLIVN 197 (286)
T ss_dssp TSCTTBHHHHCBSC-------CCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEEC--TTCBEEEEEEHHHHTTS
T ss_pred cCChHHHHHhCCCC-------ceEECCCCcHHHHHHHHHHcccCccceeEEEEEc--CCCeEEEEEEHHHHHcC
Confidence 34567899999875 89999999999999999998 888899998 78999999999998753
No 100
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=98.58 E-value=7.3e-08 Score=72.13 Aligned_cols=60 Identities=17% Similarity=0.150 Sum_probs=53.1
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCC-CeeEEEEeHHHHHHHh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ-KSVAGIITERGIFKAC 119 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~-~~lvGiVt~~Di~~~~ 119 (121)
..+++|+|.+.. +++++++++++.+|++.|.+++++.+||++ ++ ++++|+||.+|++..+
T Consensus 21 ~~~v~dim~~~~-----~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d--~~~~~~vGiv~~~Dl~~~~ 81 (334)
T 2qrd_G 21 SRTSYDVLPTSF-----RLIVFDVTLFVKTSLSLLTLNNIVSAPLWD--SEANKFAGLLTMADFVNVI 81 (334)
T ss_dssp HSBGGGGSCSEE-----EEEEEETTSBHHHHHHHHHHHTCSCEEEEE--TTTTEEEEEECHHHHHHHH
T ss_pred cCchhhhCCCCC-----CEEEEcCCCCHHHHHHHHHHcCCeEEEEEe--CCCCeEEEEEEHHHHHHHH
Confidence 368999998753 378999999999999999999999999998 54 8999999999998764
No 101
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=98.57 E-value=1.3e-07 Score=70.75 Aligned_cols=60 Identities=17% Similarity=0.180 Sum_probs=52.2
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCC-CeeEEEEeHHHHHHHh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ-KSVAGIITERGIFKAC 119 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~-~~lvGiVt~~Di~~~~ 119 (121)
..+++|+|.+.. +++++++++++.+|++.|.+++++.+||++ ++ ++++|+||.+|++..+
T Consensus 34 ~~~v~dim~p~~-----~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d--~~~~~~vGivt~~Dll~~l 94 (330)
T 2v8q_E 34 SHRCYDLIPTSS-----KLVVFDTSLQVKKAFFALVTNGVRAAPLWD--SKKQSFVGMLTITDFINIL 94 (330)
T ss_dssp HSBGGGGSCSEE-----EEEEEETTSBHHHHHHHHHHHTCSEEEEEE--TTTTEEEEEEEHHHHHHHH
T ss_pred cCcHhhhccCCC-----cEEEEeCCCcHHHHHHHHHHcCCcEEEEEe--CCCCeEEEEEEHHHHHHHH
Confidence 458999994332 289999999999999999999999999998 55 7999999999998764
No 102
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.57 E-value=3.9e-08 Score=70.20 Aligned_cols=56 Identities=11% Similarity=0.254 Sum_probs=50.4
Q ss_pred ccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHH
Q 033339 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKA 118 (121)
Q Consensus 54 ~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~ 118 (121)
..+.++|.++ ++++.+++++.+|+++|.+++++++||+| ++++++|+||.+|+.+.
T Consensus 13 ~~~~~~~~~~-------~~~v~~~~tv~ea~~~m~~~~~~~~pVvd--~~~~l~Givt~~dl~~~ 68 (213)
T 1vr9_A 13 MKVKKWVTQD-------FPMVEESATVRECLHRMRQYQTNECIVKD--REGHFRGVVNKEDLLDL 68 (213)
T ss_dssp CBGGGGCBSC-------SCEEETTCBHHHHHHHHHHTTSSEEEEEC--TTSBEEEEEEGGGGTTS
T ss_pred cCHHHhhcCC-------CeEECCCCcHHHHHHHHHHCCCCEEEEEc--CCCEEEEEEEHHHHHhh
Confidence 4577888876 89999999999999999999999999998 78999999999998754
No 103
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=98.56 E-value=1.8e-08 Score=82.81 Aligned_cols=55 Identities=9% Similarity=0.009 Sum_probs=47.9
Q ss_pred HHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 56 v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
++++|+++ ++++++++++.+|++.|.+++++.+||++ +|+++||||.+|+++++.
T Consensus 570 v~~iMt~~-------pitV~~~~~l~ea~~~M~~~~i~~lpVve---~G~lvGIVT~~Dll~~~~ 624 (632)
T 3org_A 570 LVVPCDVS-------PIVVTSYSLVRQLHFLFVMLMPSMIYVTE---RGKLVGIVEREDVAYGYS 624 (632)
T ss_dssp -CCSCCCC-------CCEEETTCBHHHHHHHHHHTCCSEEEEEE---TTEEEEEEEGGGTEECCC
T ss_pred cchhhcCC-------CceecCCCcHHHHHHHHHhcCCCEEEEEE---CCEEEEEEehhhHHHHHh
Confidence 55566654 88999999999999999999999999995 899999999999987643
No 104
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=98.53 E-value=3.8e-08 Score=80.95 Aligned_cols=61 Identities=13% Similarity=0.069 Sum_probs=53.7
Q ss_pred CcccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHH-hcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMT-QHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~-~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
...+++|+|++.+ ++.++++++++.|+.+.|. +++.+.+||+| ++++++|+||++|+.+.+
T Consensus 451 ~~~~V~diM~p~~-----~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd--~~~~lvGiVt~~DL~~~l 512 (632)
T 3org_A 451 PEMTAREIMHPIE-----GEPHLFPDSEPQHIKGILEKFPNRLVFPVID--ANGYLLGAISRKEIVDRL 512 (632)
T ss_dssp TTSBHHHHCBCTT-----TSCCBCSSSCHHHHHHHHHHSTTCCEECBBC--TTCBBCCEESHHHHTTTT
T ss_pred ccCcHHHHhhcCC-----CceEecCCCcHHHHHHHHHhcCCcceEEEEe--cCCeEEEEEEHHHHHHHH
Confidence 3578999999321 2889999999999999999 89999999998 789999999999998764
No 105
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=98.53 E-value=1e-07 Score=69.45 Aligned_cols=58 Identities=22% Similarity=0.264 Sum_probs=48.8
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHH-Hh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFK-AC 119 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~-~~ 119 (121)
..+++++|.+. ++++.+++++.+|++.|.+++.+.+||+| ++|+++|+||.+|+++ .+
T Consensus 59 ~~~v~~~m~~~-------~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd--~~~~~~Giit~~di~~~~~ 117 (282)
T 2yzq_A 59 EEQLAMLVKRD-------VPVVKENDTLKKAAKLMLEYDYRRVVVVD--SKGKPVGILTVGDIIRRYF 117 (282)
T ss_dssp -----CCCBSC-------CCEEETTSBHHHHHHHHHHHTCSEEEEEC--TTSCEEEEEEHHHHHHHTT
T ss_pred cCCHHHHcCCC-------CcEECCCCcHHHHHHHHHHcCCCEEEEEc--CCCEEEEEEEHHHHHHHHH
Confidence 45788888875 78999999999999999999999999998 6789999999999998 54
No 106
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.51 E-value=2e-07 Score=75.17 Aligned_cols=61 Identities=23% Similarity=0.306 Sum_probs=54.9
Q ss_pred CcccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
...+++++|++. ++++++++.++.+++++|.+++++.+||+| ++|+++|+||.+|+++.+.
T Consensus 173 ~~~~V~~vM~~~------~~vtv~~~~~l~eal~~m~~~~i~~lpVVD--e~g~l~GiIT~~Dil~~~~ 233 (511)
T 3usb_A 173 YSIKISDVMTKE------QLITAPVGTTLSEAEKILQKYKIEKLPLVD--NNGVLQGLITIKDIEKVIE 233 (511)
T ss_dssp SSSBHHHHCCCC------CCCCEETTCCHHHHHHHHHHHTCSEEEEEC--TTSBEEEEEEHHHHHHHHH
T ss_pred CCCcHHHhcccC------CCEEECCCCCHHHHHHHHHHcCCCEEEEEe--CCCCEeeeccHHHHHHhhh
Confidence 356899999972 289999999999999999999999999999 8999999999999998753
No 107
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=98.49 E-value=2.1e-07 Score=68.84 Aligned_cols=59 Identities=15% Similarity=0.329 Sum_probs=52.3
Q ss_pred CCcccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhc-----CCCEEEEEeCCCCCeeEEEEeHHHHHHH
Q 033339 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQH-----NVGALVVVKPGEQKSVAGIITERGIFKA 118 (121)
Q Consensus 51 ~~~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~-----~~~~lpVvd~~~~~~lvGiVt~~Di~~~ 118 (121)
+...+++++|++. ++++.++.++.+|++.|.++ ++..+||+| ++++++|+||.+|++.+
T Consensus 132 ~~~~~v~~iM~~~-------~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd--~~~~lvGivt~~dll~~ 195 (278)
T 2yvy_A 132 YEEDEAGGLMTPE-------YVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVD--EKGRLKGVLSLRDLIVA 195 (278)
T ss_dssp SCTTBGGGTCBSC-------CCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEEC--TTCBEEEEEEHHHHHHS
T ss_pred CCcchHHhhcCCC-------ceEECCCCcHHHHHHHHHHccCCccceeEEEEEC--CCCCEEEEEEHHHHhcC
Confidence 3466788999875 89999999999999999987 789999998 78999999999999853
No 108
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=98.45 E-value=2.2e-07 Score=74.77 Aligned_cols=57 Identities=5% Similarity=0.092 Sum_probs=50.3
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCC----CeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ----KSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~----~~lvGiVt~~Di~~~~~ 120 (121)
..++.++|+++ ++++.+++++.+++++|.++++ +||+| ++ |+++||||.+|+++++.
T Consensus 450 ~~~V~~im~~~-------~~~v~~~~~l~~a~~~m~~~~~--~pVVd--~~~~~~g~lvGIVT~~Dll~~l~ 510 (527)
T 3pc3_A 450 SDPAIKALNKR-------VIRLNESEILGKLARVLEVDPS--VLILG--KNPAGKVELKALATKLDVTTFIA 510 (527)
T ss_dssp TSBGGGGEETT-------CCEEETTSBHHHHHHHHTTCSE--EEEEE--ECSSSCEEEEEEEEHHHHHHHHH
T ss_pred CCcHHHHhcCC-------CeEECCCCcHHHHHHHHhhCCE--EEEEe--CCcccCCeEEEEEEHHHHHHHHH
Confidence 56789999875 8999999999999999987775 79998 53 89999999999999875
No 109
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.39 E-value=3.5e-07 Score=72.81 Aligned_cols=60 Identities=18% Similarity=0.303 Sum_probs=52.1
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
..+++++|++. +++++++++++.++++.|.+++++.+||+| ++++++|+||.+|+++.+.
T Consensus 151 ~~~v~~im~~~------~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd--~~g~lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 151 NAPISEHMTSE------HLVTAAVGTDLETAERILHEHRIEKLPLVD--NSGRLSGLITIKDIEKVIE 210 (491)
T ss_dssp SSBTTTSCCCS------CCCCEETTCCHHHHHHHHHHTTCSEEEEEC--TTSBEEEEEEHHHHHHHHH
T ss_pred CCcHHHHcCCC------CCEEECCCCCHHHHHHHHHHcCCCEEEEEc--CCCcEEEEEEHHHHHHHHh
Confidence 34566677651 278999999999999999999999999999 8899999999999998764
No 110
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.31 E-value=7.4e-08 Score=77.37 Aligned_cols=60 Identities=15% Similarity=0.249 Sum_probs=0.0
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
..+++++|++.. +++++++++++.+|+++|.+++++.+||+| ++|+++|+||.+|+++.+
T Consensus 160 ~~~V~diM~~~~-----~~~tv~~~~sl~ea~~~m~~~~i~~lpVVD--e~g~lvGiIT~~Dil~~~ 219 (503)
T 1me8_A 160 ETKVSDMMTPFS-----KLVTAHQDTKLSEANKIIWEKKLNALPIID--DDQHLRYIVFRKDYDRSQ 219 (503)
T ss_dssp -------------------------------------------------------------------
T ss_pred cCcHHHHhCCCC-----CCEEEcCCCcHHHHHHHHHHcCCCEEEEEc--CCCeEEEEEEecHHHHhh
Confidence 356788888632 278999999999999999999999999999 789999999999999875
No 111
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.29 E-value=1.3e-06 Score=70.35 Aligned_cols=82 Identities=24% Similarity=0.495 Sum_probs=62.1
Q ss_pred ceeeeeccccchhhh-----hhcCC-----------CcccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEE
Q 033339 32 PVVSSRFESVSSARM-----EEHGF-----------ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGAL 95 (121)
Q Consensus 32 ~~~~~~~~~~~~~~~-----~~~g~-----------~~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~l 95 (121)
|.+.+.++++++..| +..|+ ....++++|+.. ..|..+++++++++++.+++++|.+++++.+
T Consensus 69 Pivsa~MdtvTe~~lAia~a~~GgiGvIh~~~~~~~q~~~V~~V~~~~-~~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~ 147 (511)
T 3usb_A 69 PLISAGMDTVTEADMAIAMARQGGLGIIHKNMSIEQQAEQVDKVKRSE-SGVISDPFFLTPEHQVYDAEHLMGKYRISGV 147 (511)
T ss_dssp SEEECSCTTTCSHHHHHHHHHHTCEEEECSSSCHHHHHHHHHHHHTSS-SCSSSSCCCBCTTSBHHHHHHHHHHHCCSEE
T ss_pred CccccCchhhcHHHHHHHHHhcCCceeecccCCHHHHHHHHHHhhccc-cccccCCEEECCCCCHHHHHHHHHHcCCcEE
Confidence 556677777766554 22222 112366777653 2355668999999999999999999999999
Q ss_pred EEEeCCC--CCeeEEEEeHHHHH
Q 033339 96 VVVKPGE--QKSVAGIITERGIF 116 (121)
Q Consensus 96 pVvd~~~--~~~lvGiVt~~Di~ 116 (121)
||++ + +++++|+||.+|+.
T Consensus 148 pVvd--~g~~~~lvGiVt~rDl~ 168 (511)
T 3usb_A 148 PVVN--NLDERKLVGIITNRDMR 168 (511)
T ss_dssp EEES--CTTTCBEEEEEEHHHHT
T ss_pred EEEe--cCCCCEEEEEEEehHhh
Confidence 9998 6 78999999999986
No 112
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.26 E-value=1.1e-07 Score=76.96 Aligned_cols=57 Identities=14% Similarity=0.251 Sum_probs=0.0
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHH
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKA 118 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~ 118 (121)
..+++++|+++ ++++.++.++++|.++|.+++++.+|||| ++++|+|+||.+|+.+.
T Consensus 199 ~~~V~evMT~~-------lvt~~~~~~leeA~~iL~~~kieklpVVd--~~g~LvGlIT~kDi~k~ 255 (556)
T 4af0_A 199 ETPIKSVMTTE-------VVTGSSPITLEKANSLLRETKKGKLPIVD--SNGHLVSLVARSDLLKN 255 (556)
T ss_dssp ------------------------------------------------------------------
T ss_pred ceEhhhhcccc-------eEEecCCCCHHHHHHHHHHccccceeEEc--cCCcEEEEEEechhhhh
Confidence 56899999976 89999999999999999999999999999 89999999999999865
No 113
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.25 E-value=1.3e-07 Score=75.48 Aligned_cols=60 Identities=20% Similarity=0.369 Sum_probs=4.4
Q ss_pred ccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 54 ~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
.++.++|++.. +++++.+++++.+++++|.++++..+||+| ++|+++|+||.+|+++.+.
T Consensus 155 ~~v~~im~~~~-----~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd--~~g~lvGiIt~~Dll~~~~ 214 (494)
T 1vrd_A 155 KKIKDLMTPRE-----KLIVAPPDISLEKAKEILHQHRIEKLPLVS--KDNKLVGLITIKDIMSVIE 214 (494)
T ss_dssp -------------------------------------------------------------CHHHHT
T ss_pred CcHHHHhCCCC-----CCeEECCCCCHHHHHHHHHHcCCcEEEEEc--CCCeEEEEEEHHHHHhhhc
Confidence 56788888610 289999999999999999999999999999 8899999999999998753
No 114
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.21 E-value=1.4e-06 Score=69.91 Aligned_cols=48 Identities=23% Similarity=0.292 Sum_probs=44.2
Q ss_pred CCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHH
Q 033339 67 ADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIF 116 (121)
Q Consensus 67 ~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~ 116 (121)
|+.+++++++++++.+++++|.+++++.+||+| ++++++|+||.+|+.
T Consensus 95 m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd--~~~~lvGiVt~rDL~ 142 (496)
T 4fxs_A 95 VVTHPVTVRPEQTIADVMELTHYHGFAGFPVVT--ENNELVGIITGRDVR 142 (496)
T ss_dssp -CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEEC--SSSBEEEEEEHHHHT
T ss_pred cccCceEECCCCCHHHHHHHHHHcCCcEEEEEc--cCCEEEEEEEHHHHh
Confidence 555689999999999999999999999999998 789999999999986
No 115
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.19 E-value=2e-07 Score=74.76 Aligned_cols=60 Identities=20% Similarity=0.288 Sum_probs=0.0
Q ss_pred cccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
..++.++|++.. +++++.++.++.+|+++|.+++++.+||+| ++|+++|+||.+|++++.
T Consensus 146 ~~~V~~vMtp~~-----~~vtv~~~~~l~ea~~~m~~~~i~~lpVVD--e~g~lvGiIT~~Dil~~~ 205 (490)
T 4avf_A 146 GDTVAAIMTPKD-----KLVTAREGTPLEEMKAKLYENRIEKMLVVD--ENFYLRGLVTFRDIEKAK 205 (490)
T ss_dssp -------------------------------------------------------------------
T ss_pred CCcHHHHhccCC-----CCEEECCCCcHHHHHHHHHHcCCCEEEEEc--CCCcEEEEEehHHhhhhc
Confidence 467889998310 289999999999999999999999999999 899999999999999864
No 116
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=98.18 E-value=1.8e-06 Score=68.75 Aligned_cols=60 Identities=15% Similarity=0.318 Sum_probs=51.6
Q ss_pred CCCcccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhc-----CCCEEEEEeCCCCCeeEEEEeHHHHHHH
Q 033339 50 GFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQH-----NVGALVVVKPGEQKSVAGIITERGIFKA 118 (121)
Q Consensus 50 g~~~~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~-----~~~~lpVvd~~~~~~lvGiVt~~Di~~~ 118 (121)
.|...+++++|+++ +++++++.++.+|++.|.++ ++..+||+| ++++++|+||.+|++.+
T Consensus 151 ~~~~~~v~~iM~~~-------~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd--~~~~lvGiVt~~Dll~~ 215 (473)
T 2zy9_A 151 RYEEDEAGGLMTPE-------YVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVD--EKGRLKGVLSLRDLIVA 215 (473)
T ss_dssp TSCTTBSTTTCBSC-------EEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEEC--TTSBEEEEEEHHHHHHS
T ss_pred cCCCCCHHHhCCCC-------ceEeCCCCcHHHHHHHHHhccCCcCceeEEEEEC--CCCcEEEEEEHHHHhcC
Confidence 34556777888765 99999999999999999986 589999998 78999999999999853
No 117
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.11 E-value=3.7e-07 Score=72.90 Aligned_cols=57 Identities=19% Similarity=0.302 Sum_probs=0.0
Q ss_pred ccHHHHhhhcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 54 ~~v~dim~~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
.+++++|+++ ++++++++++.++++.|.+++++.+||+| ++++++|+||.+|+++..
T Consensus 150 ~~v~~im~~~-------~~~v~~~~~l~eal~~m~~~~~~~lpVVd--e~g~lvGiiT~~Dil~~~ 206 (486)
T 2cu0_A 150 KLVKELMTKE-------VITVPESIEVEEALKIMIENRIDRLPVVD--ERGKLVGLITMSDLVARK 206 (486)
T ss_dssp ------------------------------------------------------------------
T ss_pred CCHHHHccCC-------CeEECCcCcHHHHHHHHHHcCCCEEEEEe--cCCeEEEEEEHHHHHHhh
Confidence 4567788764 88999999999999999999999999999 789999999999998764
No 118
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.10 E-value=3e-07 Score=73.85 Aligned_cols=58 Identities=17% Similarity=0.315 Sum_probs=41.3
Q ss_pred cccHHHHhh-hcCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHH
Q 033339 53 STTISDILK-AKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKA 118 (121)
Q Consensus 53 ~~~v~dim~-~~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~ 118 (121)
..++.++|+ +. ++++++++.++.+++++|.+++++.+||+| ++|+++|+||.+|++++
T Consensus 148 ~~~v~diM~p~~------~~vtv~~~~~l~ea~~~m~~~~i~~lpVVD--e~G~l~GiIT~~DIl~~ 206 (496)
T 4fxs_A 148 TKSVAAVMTPKE------RLATVKEGATGAEVQEKMHKARVEKILVVN--DEFQLKGMITAKDFHKA 206 (496)
T ss_dssp TSBGGGTSEEGG------GCCEEECC----CGGGTCC---CCCEEEEC--TTSBCCEEECCC-----
T ss_pred CCcHHHHhcCCC------CCEEECCCCCHHHHHHHHHHcCCCEEEEEc--CCCCEEEeehHhHHHHh
Confidence 567889998 32 279999999999999999999999999999 89999999999999875
No 119
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.09 E-value=5.9e-07 Score=72.74 Aligned_cols=86 Identities=24% Similarity=0.376 Sum_probs=17.2
Q ss_pred cceeeeeccccchhhh----hhc-CC----CcccHHH----HhhhcCC--CCCCceEEEcCCCcHHHHHHHHHhcCCCEE
Q 033339 31 RPVVSSRFESVSSARM----EEH-GF----ESTTISD----ILKAKGK--GADGSWLWCTTDDTVYDAVKSMTQHNVGAL 95 (121)
Q Consensus 31 ~~~~~~~~~~~~~~~~----~~~-g~----~~~~v~d----im~~~~~--~~~~~~~~v~~~~~l~ea~~~m~~~~~~~l 95 (121)
.|.+++.++++++..| ... |+ .+.++++ +-.-+.. .|+.++++++|++|+.||+++|.+++++.+
T Consensus 93 iPlvSA~MDTVTe~~MAIamAr~GGiGvIH~n~sie~Qa~~V~~VKr~e~g~i~dPvtl~P~~Tv~da~~l~~~~~isgv 172 (556)
T 4af0_A 93 TPFLSSPMDTVTEDRMAIALALHGGLGIIHHNCSAEEQAAMVRRVKKYENGFITDPLCLGPDATVGDVLEIKAKFGFCGV 172 (556)
T ss_dssp SCEEECCCTTTCSHHHHHHHHHTTCEEEECCSSCHHHHHHHHHHHHHCCC------------------------------
T ss_pred CCEEecCcccccCHHHHHHHHHCCCeEEEcCCCCHHHHHHHHHHHHhcccCccCCCeEcCCCCCHHHHHHHHHHhCCCcc
Confidence 3677788999886644 222 33 3344432 2221222 366678999999999999999999999999
Q ss_pred EEEeCCC-CCeeEEEEeHHHHH
Q 033339 96 VVVKPGE-QKSVAGIITERGIF 116 (121)
Q Consensus 96 pVvd~~~-~~~lvGiVt~~Di~ 116 (121)
||+++++ +++|+||||.+|+.
T Consensus 173 pVvd~g~~~~kLvGIvT~RD~r 194 (556)
T 4af0_A 173 PITETGEPDSKLLGIVTGRDVQ 194 (556)
T ss_dssp ----------------------
T ss_pred ccccccCcCCEEEEEEeccccc
Confidence 9997322 57999999999974
No 120
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.03 E-value=5.1e-07 Score=72.03 Aligned_cols=46 Identities=30% Similarity=0.416 Sum_probs=0.0
Q ss_pred ceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHH
Q 033339 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFK 117 (121)
Q Consensus 70 ~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~ 117 (121)
+++++.+++++.+|++.|.+++++.+||+| ++++++|+||.+|+.+
T Consensus 104 ~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd--~~~~lvGivt~~Dl~~ 149 (494)
T 1vrd_A 104 DPITVTPDMTVKEAIDLMAEYKIGGLPVVD--EEGRLVGLLTNRDVRF 149 (494)
T ss_dssp ------------------------------------------------
T ss_pred CCeEECCCCCHHHHHHHHHHcCceEEEEEc--CCCEEEEEEEHHHHHh
Confidence 489999999999999999999999999998 7899999999999974
No 121
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=97.95 E-value=1.1e-05 Score=64.09 Aligned_cols=49 Identities=20% Similarity=0.275 Sum_probs=43.3
Q ss_pred CceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHH
Q 033339 69 GSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFK 117 (121)
Q Consensus 69 ~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~ 117 (121)
++++++.+++++.++++.|.+++++.+||++++++++++|+||.+|++.
T Consensus 98 ~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~ 146 (491)
T 1zfj_A 98 IDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRF 146 (491)
T ss_dssp SSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHH
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhh
Confidence 3489999999999999999999999999996212689999999999975
No 122
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=97.94 E-value=1.6e-07 Score=75.37 Aligned_cols=58 Identities=17% Similarity=0.293 Sum_probs=41.1
Q ss_pred cccHHHHhhh--cCCCCCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 53 STTISDILKA--KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 53 ~~~v~dim~~--~~~~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
..+++++|++ + ++++.+++++.+|+++|.+++++.+||+| ++|+++|+||.+|+++.+
T Consensus 172 ~~~v~~vm~~~~~-------~~tv~~~~~l~ea~~~m~~~~~~~lpVVd--~~g~lvGiIt~~Dll~~~ 231 (514)
T 1jcn_A 172 TTLLSEVMTPRIE-------LVVAPAGVTLKEANEILQRSKKGKLPIVN--DCDELVAIIARTDLKKNR 231 (514)
T ss_dssp ---------CCBC-------CCCEETTCCSTTTTTHHHHHTCSCCCEES--SSSCCC----CCCCSSCC
T ss_pred CCCHHHHhCCCCC-------CeEECCCCCHHHHHHHHHHcCCCcccEEC--CCCeEEEEEEHHHHHHHh
Confidence 3567888886 4 89999999999999999999999999999 789999999999987653
No 123
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.87 E-value=1.9e-06 Score=69.23 Aligned_cols=49 Identities=16% Similarity=0.095 Sum_probs=0.0
Q ss_pred CCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCC---CeeEEEEeHHHHHH
Q 033339 67 ADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ---KSVAGIITERGIFK 117 (121)
Q Consensus 67 ~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~---~~lvGiVt~~Di~~ 117 (121)
|+++++++++++++.+|+++|.+++++.+||+| ++ ++++|+||.+|++.
T Consensus 103 M~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd--~~~~~g~lvGiVt~~Dl~~ 154 (503)
T 1me8_A 103 FVVSDSNVKPDQTFADVLAISQRTTHNTVAVTD--DGTPHGVLLGLVTQRDYPI 154 (503)
T ss_dssp ------------------------------------------------------
T ss_pred cccCCeEECCCCcHHHHHHHHHHcCceEEEEEE--CCCcCCeEEEEEEHHHHHh
Confidence 344589999999999999999999999999998 55 89999999999974
No 124
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.68 E-value=5.7e-06 Score=66.27 Aligned_cols=47 Identities=17% Similarity=0.213 Sum_probs=0.0
Q ss_pred CCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHH
Q 033339 67 ADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIF 116 (121)
Q Consensus 67 ~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~ 116 (121)
|+.+++++++++++.+|+++|.+++++.+||+| +++++|+||.+|+.
T Consensus 94 m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd---~g~lvGIVt~rDl~ 140 (490)
T 4avf_A 94 IVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE---QGELVGIVTGRDLR 140 (490)
T ss_dssp --------------------------------------------------
T ss_pred cccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE---CCEEEEEEEhHHhh
Confidence 444589999999999999999999999999997 78999999999986
No 125
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=97.56 E-value=5.4e-06 Score=66.47 Aligned_cols=49 Identities=18% Similarity=0.205 Sum_probs=22.5
Q ss_pred CCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCC---CCeeEEEEeHHHHHH
Q 033339 67 ADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGE---QKSVAGIITERGIFK 117 (121)
Q Consensus 67 ~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~---~~~lvGiVt~~Di~~ 117 (121)
|+++++++.+++++.+|+++|.+++++.+||+| + +++++|+||.+|+..
T Consensus 114 m~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd--~~~~~~~lvGiVt~~Dl~~ 165 (514)
T 1jcn_A 114 FITDPVVLSPSHTVGDVLEAKMRHGFSGIPITE--TGTMGSKLVGIVTSRDIDF 165 (514)
T ss_dssp SCSSCCCCCC-----------------CEESCC----------CCEECTTTTC-
T ss_pred cccCCEEECCCCCHHHHHHHHHhcCCCEEEEEe--CCCcCCEEEEEEEHHHHHh
Confidence 344588999999999999999999999999998 5 489999999999865
No 126
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=97.13 E-value=6.8e-05 Score=59.76 Aligned_cols=47 Identities=32% Similarity=0.380 Sum_probs=0.0
Q ss_pred CCCceEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHH
Q 033339 67 ADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIF 116 (121)
Q Consensus 67 ~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~ 116 (121)
|..+++++.+++++.++++.|.+++++.+||++ + ++++|+||.+|++
T Consensus 99 m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd--~-~~lvGivt~~Dl~ 145 (486)
T 2cu0_A 99 IVEDVITIAPDETVDFALFLMEKHGIDGLPVVE--D-EKVVGIITKKDIA 145 (486)
T ss_dssp --------------------------------------------------
T ss_pred cccCceEECCCCCHHHHHHHHHHcCCcEEEEEE--C-CEEEEEEEHHHhc
Confidence 334589999999999999999999999999998 5 9999999999985
No 127
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=64.23 E-value=13 Score=22.20 Aligned_cols=26 Identities=8% Similarity=0.222 Sum_probs=21.4
Q ss_pred CCCEEEEEeCCCCCeeEEEEeHHHHHHH
Q 033339 91 NVGALVVVKPGEQKSVAGIITERGIFKA 118 (121)
Q Consensus 91 ~~~~lpVvd~~~~~~lvGiVt~~Di~~~ 118 (121)
....+=+++ ++|..+|+++.++.++.
T Consensus 12 r~~eVrli~--~~Ge~lGv~~~~eAl~~ 37 (78)
T 1tif_A 12 RAREVRLID--QNGDQLGIKSKQEALEI 37 (78)
T ss_dssp CCSEEEEEC--TTSCEEEEEEHHHHHHH
T ss_pred CCCEEEEEC--CCCcCCCcccHHHHHHH
Confidence 345577888 89999999999998775
No 128
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=45.43 E-value=20 Score=23.94 Aligned_cols=35 Identities=29% Similarity=0.427 Sum_probs=27.8
Q ss_pred cHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHH
Q 033339 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIF 116 (121)
Q Consensus 79 ~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~ 116 (121)
.+.+.++.+.+.+...+.|.. +++++|+|...|.+
T Consensus 120 ~~~~~~~~la~~G~T~v~VA~---d~~l~GvIalaD~i 154 (156)
T 1svj_A 120 DVDQKVDQVARQGATPLVVVE---GSRVLGVIALKDIV 154 (156)
T ss_dssp HHHHHHHHHHHTTCEEEEEEE---TTEEEEEEEEEECC
T ss_pred HHHHHHHHHHhCCCCEEEEEE---CCEEEEEEEEecCC
Confidence 367777888888887777774 79999999988753
No 129
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=45.05 E-value=18 Score=22.73 Aligned_cols=18 Identities=17% Similarity=0.219 Sum_probs=14.3
Q ss_pred EEEEEeCCCCCeeEEEEeHH
Q 033339 94 ALVVVKPGEQKSVAGIITER 113 (121)
Q Consensus 94 ~lpVvd~~~~~~lvGiVt~~ 113 (121)
..||.+ ++|+++|+|+..
T Consensus 105 ~~PV~~--~~g~viGvv~vg 122 (131)
T 1p0z_A 105 KSPIQD--ATGKVIGIVSVG 122 (131)
T ss_dssp EEEEEC--TTCCEEEEEEEE
T ss_pred EEeEEC--CCCCEEEEEEEE
Confidence 468987 689999999754
No 130
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=44.19 E-value=18 Score=23.15 Aligned_cols=18 Identities=11% Similarity=0.178 Sum_probs=14.2
Q ss_pred EEEEEeCCCCCeeEEEEeHH
Q 033339 94 ALVVVKPGEQKSVAGIITER 113 (121)
Q Consensus 94 ~lpVvd~~~~~~lvGiVt~~ 113 (121)
..||.+ ++|+++|+|+..
T Consensus 110 ~~PV~~--~~g~viGvv~vg 127 (142)
T 3by8_A 110 FTPIYD--ENHKQIGVVAIG 127 (142)
T ss_dssp EEEEEC--TTSCEEEEEEEE
T ss_pred EEeEEc--CCCCEEEEEEEe
Confidence 468886 679999998754
No 131
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=43.09 E-value=14 Score=25.79 Aligned_cols=20 Identities=25% Similarity=0.107 Sum_probs=16.5
Q ss_pred CCCEEEEEeCCCCCeeEEEEeH
Q 033339 91 NVGALVVVKPGEQKSVAGIITE 112 (121)
Q Consensus 91 ~~~~lpVvd~~~~~~lvGiVt~ 112 (121)
+-+.=|++| .+|+++||+|.
T Consensus 187 G~SGGPLv~--~~G~vVGI~s~ 206 (231)
T 3tjo_A 187 GNAGGPLVN--LDGEVIGINTL 206 (231)
T ss_dssp TTTTSEEEC--TTSCEEEEEEE
T ss_pred CCchhHeec--CCCeEEEEEeE
Confidence 556669998 78999999985
No 132
>3k2t_A LMO2511 protein; listeria monocytogenes,binding, structural genomics, PSI-2, protein structure initiative; 2.40A {Listeria monocytogenes}
Probab=42.74 E-value=39 Score=18.81 Aligned_cols=24 Identities=17% Similarity=0.001 Sum_probs=21.9
Q ss_pred CCCcHHHHHHHHHhcCCCEEEEEe
Q 033339 76 TDDTVYDAVKSMTQHNVGALVVVK 99 (121)
Q Consensus 76 ~~~~l~ea~~~m~~~~~~~lpVvd 99 (121)
+-.+++||+..|...+...+...|
T Consensus 11 kpmsveEAv~qmel~gh~F~vF~n 34 (57)
T 3k2t_A 11 KPMDSEEAVLQMNLLGHSFYVYTD 34 (57)
T ss_dssp CCBCHHHHHHHHHHHTCSEEEEEB
T ss_pred CCCCHHHHHHHHHhCCCcEEEEEc
Confidence 557999999999999999999998
No 133
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=40.64 E-value=16 Score=25.59 Aligned_cols=22 Identities=23% Similarity=0.211 Sum_probs=17.8
Q ss_pred hcCCCEEEEEeCCCCCeeEEEEeH
Q 033339 89 QHNVGALVVVKPGEQKSVAGIITE 112 (121)
Q Consensus 89 ~~~~~~lpVvd~~~~~~lvGiVt~ 112 (121)
..+-+.=|++| .+|+++||+|.
T Consensus 172 ~~G~SGGPlv~--~~G~vvGI~s~ 193 (237)
T 3lgi_A 172 NHGNSGGALVN--SLGELMGINTL 193 (237)
T ss_dssp CTTCTTCEEEC--TTCCEEEEECC
T ss_pred CCCCchHHeeC--CCCeEEEEEee
Confidence 34667779998 78999999875
No 134
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=40.29 E-value=16 Score=24.92 Aligned_cols=21 Identities=14% Similarity=0.235 Sum_probs=16.8
Q ss_pred cCCCEEEEEeCCCCCeeEEEEeH
Q 033339 90 HNVGALVVVKPGEQKSVAGIITE 112 (121)
Q Consensus 90 ~~~~~lpVvd~~~~~~lvGiVt~ 112 (121)
.+-+.=|+++ .+|+++||+|.
T Consensus 155 ~GdSGGPlv~--~~g~lvGI~s~ 175 (210)
T 2as9_A 155 PGNSGSPVLN--SNNEVIGVVYG 175 (210)
T ss_dssp TTCTTCEEEC--TTSCEEEEECC
T ss_pred CCCccCcEEC--CCCeEEEEEec
Confidence 3556679997 68999999985
No 135
>3ka5_A Ribosome-associated protein Y (PSRP-1); structural genomics, PSI-2, protein structure initiative; 1.80A {Clostridium acetobutylicum}
Probab=39.86 E-value=50 Score=18.94 Aligned_cols=24 Identities=17% Similarity=0.029 Sum_probs=21.8
Q ss_pred CCCcHHHHHHHHHhcCCCEEEEEe
Q 033339 76 TDDTVYDAVKSMTQHNVGALVVVK 99 (121)
Q Consensus 76 ~~~~l~ea~~~m~~~~~~~lpVvd 99 (121)
+-.|++||+..|...+.+.++..|
T Consensus 11 kpMsveEAv~qmel~gh~F~vF~n 34 (65)
T 3ka5_A 11 KPMSEEEAVLEMELLGHNFFVFQN 34 (65)
T ss_dssp SCBCHHHHHHHHHHHTCSEEEEEE
T ss_pred CCCCHHHHHHHHHhCCCcEEEEEe
Confidence 457899999999999999999998
No 136
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=39.18 E-value=18 Score=25.14 Aligned_cols=21 Identities=10% Similarity=0.126 Sum_probs=17.4
Q ss_pred cCCCEEEEEeCCCCCeeEEEEeH
Q 033339 90 HNVGALVVVKPGEQKSVAGIITE 112 (121)
Q Consensus 90 ~~~~~lpVvd~~~~~~lvGiVt~ 112 (121)
.+-+.=|+++ .+|+++||++.
T Consensus 180 ~GdSGGPLv~--~~G~vvGI~s~ 200 (237)
T 3k6y_A 180 QGDSGGPLID--LNGQVLGVVFG 200 (237)
T ss_dssp TTCTTCEEEC--TTSCEEEEEEE
T ss_pred CCccHHHEEC--CCCEEEEEEEe
Confidence 4667779998 78999999985
No 137
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=38.93 E-value=19 Score=24.11 Aligned_cols=22 Identities=14% Similarity=0.216 Sum_probs=17.0
Q ss_pred cCCCEEEEEeCCCCCeeEEEEeHH
Q 033339 90 HNVGALVVVKPGEQKSVAGIITER 113 (121)
Q Consensus 90 ~~~~~lpVvd~~~~~~lvGiVt~~ 113 (121)
.+-+.=|+++ .+++++||+|..
T Consensus 151 ~GdSGGPl~~--~~g~lvGI~s~g 172 (200)
T 2w7s_A 151 PGNSGSPVLN--SKHELIGILYAG 172 (200)
T ss_dssp TTCTTCEEEC--TTSCEEEEEEEE
T ss_pred CCCccCeEEC--cCCEEEEEEecc
Confidence 3556678887 679999999864
No 138
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=37.55 E-value=18 Score=25.77 Aligned_cols=24 Identities=17% Similarity=0.188 Sum_probs=18.9
Q ss_pred hcCCCEEEEEeCCCCCeeEEEEeHHH
Q 033339 89 QHNVGALVVVKPGEQKSVAGIITERG 114 (121)
Q Consensus 89 ~~~~~~lpVvd~~~~~~lvGiVt~~D 114 (121)
..+-+.=||+| .+|+++||-|.+|
T Consensus 123 ~pGdSGsPVvn--~dG~VIGVHt~s~ 146 (213)
T 3fan_A 123 ACGDSGSPVIT--EAGELVGVHTGSN 146 (213)
T ss_dssp CCCSTTCEEEE--TTSCEEEEEEC--
T ss_pred CCCCCCCccCC--CCCcEEEEEeccC
Confidence 45777789999 8999999998766
No 139
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=37.21 E-value=21 Score=23.83 Aligned_cols=23 Identities=17% Similarity=0.138 Sum_probs=19.1
Q ss_pred HhcCCCEEEEEeCCCCCeeEEEEeH
Q 033339 88 TQHNVGALVVVKPGEQKSVAGIITE 112 (121)
Q Consensus 88 ~~~~~~~lpVvd~~~~~~lvGiVt~ 112 (121)
...+-+.=|++| .+|+++||.+.
T Consensus 122 i~pGnSGGPl~n--~~G~VVGI~~~ 144 (163)
T 2w5e_A 122 TQDGMSGAPVCD--KYCRVLAVHQT 144 (163)
T ss_dssp CSSCCTTCEEEC--TTSCEEEEEEE
T ss_pred eCCCCchhhEEc--CCCEEEEEEcc
Confidence 456778899998 78999999863
No 140
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=36.86 E-value=21 Score=25.46 Aligned_cols=21 Identities=14% Similarity=0.131 Sum_probs=17.4
Q ss_pred cCCCEEEEEeCCCCCeeEEEEeH
Q 033339 90 HNVGALVVVKPGEQKSVAGIITE 112 (121)
Q Consensus 90 ~~~~~lpVvd~~~~~~lvGiVt~ 112 (121)
.+-+.=|++| .+|+++||+|.
T Consensus 184 ~G~SGGPLvn--~~G~vVGI~s~ 204 (245)
T 3sti_A 184 RGNSGGALLN--LNGELIGINTA 204 (245)
T ss_dssp TTTTTSEEEC--TTSCEEEEEEC
T ss_pred CCcchhHeec--CCCeEEEEEEe
Confidence 4667779998 78999999875
No 141
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Probab=35.97 E-value=22 Score=23.61 Aligned_cols=21 Identities=14% Similarity=0.177 Sum_probs=16.1
Q ss_pred CCCEEEEEeCCCCCeeEEEEeHH
Q 033339 91 NVGALVVVKPGEQKSVAGIITER 113 (121)
Q Consensus 91 ~~~~lpVvd~~~~~~lvGiVt~~ 113 (121)
+-+.=|+++ .+++++||+|..
T Consensus 155 GdSGGPl~~--~~g~lvGI~s~g 175 (204)
T 2vid_A 155 GNSGSPVLN--SNNELVGIHFAS 175 (204)
T ss_dssp GGTTCEEEC--TTSCEEEEEEEE
T ss_pred CCccCcEEC--CCCeEEEEEecC
Confidence 445568887 688999999853
No 142
>3lyv_A Ribosome-associated factor Y; ribosomal protein S30AE family, structural genomics, PSI-2, structure initiative; 2.70A {Streptococcus pyogenes}
Probab=35.71 E-value=53 Score=18.86 Aligned_cols=24 Identities=13% Similarity=-0.002 Sum_probs=21.6
Q ss_pred CCCcHHHHHHHHHhcCCCEEEEEe
Q 033339 76 TDDTVYDAVKSMTQHNVGALVVVK 99 (121)
Q Consensus 76 ~~~~l~ea~~~m~~~~~~~lpVvd 99 (121)
+-.+++||+..|...+.+.++..|
T Consensus 12 kpMsveEAv~qMel~gh~F~vF~n 35 (66)
T 3lyv_A 12 KPMDVEEARLQMELLGHDFFIYTD 35 (66)
T ss_dssp CEECHHHHHHHHHTTTCSEEEEEE
T ss_pred CCCCHHHHHHHHHcCCCcEEEEEe
Confidence 456899999999999999999998
No 143
>3r8s_H 50S ribosomal protein L9; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_F 1p86_F 1vs8_H 1vs6_H 2aw4_H 2awb_H 2gya_F 2gyc_F 1vt2_H 2i2v_H 2j28_H 2i2t_H* 2qao_H* 2qba_H* 2qbc_H* 2qbe_H 2qbg_H 2qbi_H* 2qbk_H* 2qov_H ...
Probab=35.27 E-value=35 Score=22.72 Aligned_cols=23 Identities=30% Similarity=0.417 Sum_probs=18.5
Q ss_pred EeCCCCCeeEEEEeHHHHHHHhh
Q 033339 98 VKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 98 vd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
...+++|++-|-||..||..++.
T Consensus 82 ~k~g~~gklfGSVt~~dIa~al~ 104 (149)
T 3r8s_H 82 SKAGDEGKLFGSIGTRDIADAVT 104 (149)
T ss_dssp ECBCTTSEEEEEECHHHHHHHHH
T ss_pred EEcCCCCceEcccCHHHHHHHHH
Confidence 33346899999999999998864
No 144
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Probab=34.66 E-value=24 Score=24.68 Aligned_cols=20 Identities=10% Similarity=0.096 Sum_probs=15.9
Q ss_pred CCCEEEEEeCCCCCeeEEEEeH
Q 033339 91 NVGALVVVKPGEQKSVAGIITE 112 (121)
Q Consensus 91 ~~~~lpVvd~~~~~~lvGiVt~ 112 (121)
+-+.=|+++ .+|+++||+|.
T Consensus 184 GdSGGPlv~--~~g~lvGI~s~ 203 (246)
T 1qtf_A 184 GNSGSGIFN--LKGELIGIHSG 203 (246)
T ss_dssp GGTTCEEEC--TTCCEEEEEEE
T ss_pred CCchhheEC--CCCEEEEEEec
Confidence 445568997 68999999985
No 145
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=33.28 E-value=27 Score=24.19 Aligned_cols=20 Identities=10% Similarity=0.164 Sum_probs=15.7
Q ss_pred CCCEEEEEeCCCCCeeEEEEeH
Q 033339 91 NVGALVVVKPGEQKSVAGIITE 112 (121)
Q Consensus 91 ~~~~lpVvd~~~~~~lvGiVt~ 112 (121)
+-+.=|+++ .+|+++||+|.
T Consensus 193 GdSGGPl~~--~~g~lvGI~s~ 212 (242)
T 1agj_A 193 GNSGSGIFN--SNGELVGIHSS 212 (242)
T ss_dssp GGTTCEEEC--TTSEEEEEEEE
T ss_pred CCCchHhcc--cCCEEEEEEec
Confidence 445568887 68999999985
No 146
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=32.91 E-value=20 Score=19.95 Aligned_cols=46 Identities=13% Similarity=0.032 Sum_probs=27.5
Q ss_pred eEEEcCCCcHHHHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 71 WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 71 ~~~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
+..++.+.. .+..+.+.++++..+|++- .+|+.+|-.+...+...+
T Consensus 28 ~~~vdi~~~-~~~~~~~~~~g~~~vP~~~--~~g~~~~g~~~~~l~~~l 73 (81)
T 1h75_A 28 FEMINVDRV-PEAAEALRAQGFRQLPVVI--AGDLSWSGFRPDMINRLH 73 (81)
T ss_dssp CEEEETTTC-HHHHHHHHHTTCCSSCEEE--ETTEEEESCCHHHHGGGS
T ss_pred eEEEECCCC-HHHHHHHHHhCCCccCEEE--ECCEEEecCCHHHHHHHH
Confidence 444444432 2233445567888889875 467777767777665543
No 147
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=32.44 E-value=36 Score=18.28 Aligned_cols=34 Identities=9% Similarity=-0.164 Sum_probs=23.0
Q ss_pred HHHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHh
Q 033339 84 VKSMTQHNVGALVVVKPGEQKSVAGIITERGIFKAC 119 (121)
Q Consensus 84 ~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~ 119 (121)
.+.+..+++..+|++- .+|+.+|=.+...+.+.+
T Consensus 40 ~~~~~~~~~~~vP~l~--~~g~~~~g~~~~~l~~~l 73 (75)
T 1r7h_A 40 RDYVMALGYVQAPVVE--VDGEHWSGFRPERIKQLQ 73 (75)
T ss_dssp HHHHHHTTCBCCCEEE--ETTEEEESCCHHHHHHHH
T ss_pred HHHHHHcCCCccCEEE--ECCeEEcCCCHHHHHHHH
Confidence 3444668888899886 466666556777766554
No 148
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=29.50 E-value=30 Score=24.35 Aligned_cols=21 Identities=19% Similarity=0.109 Sum_probs=16.4
Q ss_pred cCCCEEEEEeCCCCCeeEEEEeH
Q 033339 90 HNVGALVVVKPGEQKSVAGIITE 112 (121)
Q Consensus 90 ~~~~~lpVvd~~~~~~lvGiVt~ 112 (121)
.+-+.=|+++ .+|+++||+|.
T Consensus 180 ~G~SGGPLv~--~~G~vvGI~s~ 200 (239)
T 1l1j_A 180 PGNSGGPLLN--IHGEVIGINTA 200 (239)
T ss_dssp TTTTTSEEEC--SSSEEEEEECC
T ss_pred CCCccHHhcc--CCCeEEEEEee
Confidence 3455668887 78999999985
No 149
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=29.11 E-value=33 Score=25.22 Aligned_cols=20 Identities=25% Similarity=0.107 Sum_probs=16.4
Q ss_pred CCCEEEEEeCCCCCeeEEEEeH
Q 033339 91 NVGALVVVKPGEQKSVAGIITE 112 (121)
Q Consensus 91 ~~~~lpVvd~~~~~~lvGiVt~ 112 (121)
+-+.=|++| .+|+++||+|.
T Consensus 170 G~SGGPlv~--~~G~vvGI~s~ 189 (332)
T 3num_A 170 GNAGGPLVN--LDGEVIGINTL 189 (332)
T ss_dssp TTTTSEEEE--TTSCEEEEEEE
T ss_pred CCcHHHhhC--CCCcEEEEEee
Confidence 556669998 78999999984
No 150
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=26.44 E-value=38 Score=25.16 Aligned_cols=21 Identities=14% Similarity=0.129 Sum_probs=17.1
Q ss_pred cCCCEEEEEeCCCCCeeEEEEeH
Q 033339 90 HNVGALVVVKPGEQKSVAGIITE 112 (121)
Q Consensus 90 ~~~~~lpVvd~~~~~~lvGiVt~ 112 (121)
.+-+.=|++| .+|+++||+|.
T Consensus 177 ~G~SGGPLvn--~~G~vvGI~s~ 197 (348)
T 3qo6_A 177 PGNSGGPLLD--SSGTLIGINTA 197 (348)
T ss_dssp TTCTTCEEEC--TTSCEEEEEEE
T ss_pred CCCcHHHhhC--CCCeEEEEEEe
Confidence 3566779998 78999999875
No 151
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=26.23 E-value=40 Score=24.75 Aligned_cols=21 Identities=19% Similarity=0.099 Sum_probs=16.8
Q ss_pred cCCCEEEEEeCCCCCeeEEEEeH
Q 033339 90 HNVGALVVVKPGEQKSVAGIITE 112 (121)
Q Consensus 90 ~~~~~lpVvd~~~~~~lvGiVt~ 112 (121)
.+-+.=|++| .+|+++||++.
T Consensus 170 ~G~SGGPl~~--~~G~vVGI~s~ 190 (325)
T 1lcy_A 170 FGNAGGPLVN--LDGEVIGVNTM 190 (325)
T ss_dssp TTTTTSEEEE--TTSCEEEEEEE
T ss_pred CCCccccEEC--CCCEEEEEEeE
Confidence 4556678998 78999999874
No 152
>2fb5_A Hypothetical membrane spanning protein; structural genomics, membrane protein, PSI, protein structur initiative; 1.99A {Bacillus cereus} SCOP: d.320.1.1
Probab=25.66 E-value=65 Score=22.73 Aligned_cols=27 Identities=22% Similarity=0.457 Sum_probs=23.4
Q ss_pred EEcCCCc----HHHHHHHHHhcCCCEEEEEe
Q 033339 73 WCTTDDT----VYDAVKSMTQHNVGALVVVK 99 (121)
Q Consensus 73 ~v~~~~~----l~ea~~~m~~~~~~~lpVvd 99 (121)
.+.|... +.+|+..|.+.++++|.|+.
T Consensus 69 ~~aPgt~~i~~l~~a~~~ls~~k~GALIVie 99 (205)
T 2fb5_A 69 YLSPYTESSSFITTAIQHLSARKHGALIVVE 99 (205)
T ss_dssp HHTTTCSCHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred HhCCCChHHHHHHHHHHHHhccCeeEEEEEE
Confidence 3556777 88999999999999999996
No 153
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=25.24 E-value=42 Score=24.47 Aligned_cols=20 Identities=20% Similarity=0.121 Sum_probs=16.2
Q ss_pred CCCEEEEEeCCCCCeeEEEEeH
Q 033339 91 NVGALVVVKPGEQKSVAGIITE 112 (121)
Q Consensus 91 ~~~~lpVvd~~~~~~lvGiVt~ 112 (121)
+-+.=|+++ .+|+++||++.
T Consensus 163 G~SGGPl~~--~~G~vvGI~s~ 182 (318)
T 1te0_A 163 GNSGGALVN--SLGELMGINTL 182 (318)
T ss_dssp TTTTSEEEC--TTCCEEEEEEC
T ss_pred CCCcCceEC--CCCeEEEEEee
Confidence 455668998 78999999974
No 154
>3dba_A CONE CGMP-specific 3',5'-cyclic phosphodiesterase alpha'; 3', GAF domain, cyclic nucleotide phosphodiesterase hydrolase, lipoprotein, membrane; HET: 35G; 2.57A {Gallus gallus}
Probab=25.13 E-value=58 Score=21.12 Aligned_cols=20 Identities=20% Similarity=0.311 Sum_probs=15.7
Q ss_pred cCCCEEEEEeCCCCCeeEEEEeH
Q 033339 90 HNVGALVVVKPGEQKSVAGIITE 112 (121)
Q Consensus 90 ~~~~~lpVvd~~~~~~lvGiVt~ 112 (121)
..+=|+|+.. +++++|++..
T Consensus 124 ~S~L~vPl~~---~~~viGVL~l 143 (180)
T 3dba_A 124 VNMMAIPITQ---GKEVLAVVMA 143 (180)
T ss_dssp CCEEEEEEEE---TTEEEEEEEE
T ss_pred cEEEEEEecc---CCEEEEEEEE
Confidence 3555889997 6899999874
No 155
>3e0y_A Conserved domain protein; APC87688.2, geobacter sulfurreducens PCA, structural genomics, PSI-2, midwest center for structural G MCSG; 3.10A {Geobacter sulfurreducens}
Probab=24.89 E-value=54 Score=20.32 Aligned_cols=19 Identities=21% Similarity=0.303 Sum_probs=14.3
Q ss_pred CCCEEEEEeCCCCCeeEEEEeH
Q 033339 91 NVGALVVVKPGEQKSVAGIITE 112 (121)
Q Consensus 91 ~~~~lpVvd~~~~~~lvGiVt~ 112 (121)
..=++|+.. +|+++|++..
T Consensus 119 s~l~vPl~~---~~~~iGvl~~ 137 (181)
T 3e0y_A 119 SMLSFPIGD---KKEVYGVINL 137 (181)
T ss_dssp EEEEEEEEC---SSCEEEEEEE
T ss_pred eEEEEEEEe---CCeEEEEEEE
Confidence 334679986 6899999864
No 156
>1div_A Ribosomal protein L9; rRNA-binding; 2.60A {Geobacillus stearothermophilus} SCOP: d.99.1.1 d.100.1.1 PDB: 1giy_K 1yl3_K 2b66_I 2b9n_I 2b9p_I 487d_K
Probab=24.80 E-value=41 Score=22.40 Aligned_cols=20 Identities=30% Similarity=0.406 Sum_probs=17.1
Q ss_pred CCCCeeEEEEeHHHHHHHhh
Q 033339 101 GEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 101 ~~~~~lvGiVt~~Di~~~~~ 120 (121)
+++|++-|-||..||..++.
T Consensus 84 g~~gklfGSVt~~dIa~al~ 103 (149)
T 1div_A 84 GEGGRLFGSITSKQIAESLQ 103 (149)
T ss_dssp CGGGEEEEEECHHHHHHHHH
T ss_pred CCCCcEEeecCHHHHHHHHH
Confidence 36799999999999998763
No 157
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=24.74 E-value=44 Score=24.34 Aligned_cols=21 Identities=10% Similarity=0.137 Sum_probs=16.8
Q ss_pred cCCCEEEEEeCCCCCeeEEEEeH
Q 033339 90 HNVGALVVVKPGEQKSVAGIITE 112 (121)
Q Consensus 90 ~~~~~lpVvd~~~~~~lvGiVt~ 112 (121)
.+-+.=|+++ .+|+++||+|.
T Consensus 166 ~G~SGGPlv~--~~G~vvGI~s~ 186 (324)
T 1y8t_A 166 PGNSGGALVN--MNAQLVGVNSA 186 (324)
T ss_dssp TTCTTEEEEC--TTSEEEEEEEE
T ss_pred CCCccCcEEC--CCCeEEEEEee
Confidence 3556679998 78999999874
No 158
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A
Probab=24.36 E-value=45 Score=23.80 Aligned_cols=21 Identities=24% Similarity=0.175 Sum_probs=16.5
Q ss_pred cCCCEEEEEeCCCCCeeEEEEeH
Q 033339 90 HNVGALVVVKPGEQKSVAGIITE 112 (121)
Q Consensus 90 ~~~~~lpVvd~~~~~~lvGiVt~ 112 (121)
.+-+.=|+++ .+++++||+|.
T Consensus 166 ~GdSGGPLv~--~~g~lvGIvS~ 186 (274)
T 2o8l_A 166 GGNSGSPVFN--EKNEVIGIHWG 186 (274)
T ss_dssp TTCTTCEEEC--TTSCEEEEEEE
T ss_pred CCCchhheec--cCCeEEEEEeC
Confidence 3556678887 68999999985
No 159
>3trc_A Phosphoenolpyruvate-protein phosphotransferase; signal transduction; HET: MSE; 1.65A {Coxiella burnetii}
Probab=24.30 E-value=64 Score=19.80 Aligned_cols=16 Identities=19% Similarity=0.459 Sum_probs=13.2
Q ss_pred EEEEEeCCCCCeeEEEEeH
Q 033339 94 ALVVVKPGEQKSVAGIITE 112 (121)
Q Consensus 94 ~lpVvd~~~~~~lvGiVt~ 112 (121)
++|+.. +|+++|++..
T Consensus 117 ~vPl~~---~~~~~Gvl~~ 132 (171)
T 3trc_A 117 GIPIIE---QGELLGILVI 132 (171)
T ss_dssp EEEEEE---TTEEEEEEEE
T ss_pred EEeEEE---CCEEEEEEEE
Confidence 688886 7899999864
No 160
>3ci6_A Phosphoenolpyruvate-protein phosphotransferase; PEP-phosphotransferase, GAF domain, structura genomics, PSI-2, protein structure initiative; HET: MSE P4G; 1.55A {Acinetobacter SP}
Probab=24.00 E-value=66 Score=19.44 Aligned_cols=17 Identities=18% Similarity=0.327 Sum_probs=13.5
Q ss_pred CEEEEEeCCCCCeeEEEEeH
Q 033339 93 GALVVVKPGEQKSVAGIITE 112 (121)
Q Consensus 93 ~~lpVvd~~~~~~lvGiVt~ 112 (121)
=++|+.. +|+++|++..
T Consensus 118 l~vPl~~---~~~~~Gvl~l 134 (171)
T 3ci6_A 118 LGVPVMY---RRKVMGVLVV 134 (171)
T ss_dssp EEEEEEE---TTEEEEEEEE
T ss_pred EEEeEEE---CCEEEEEEEE
Confidence 3688886 7999999864
No 161
>2e4s_A CAMP and CAMP-inhibited CGMP 3',5'-cyclic phosphodiesterase 10A; GAF domain, structural genomics, NPPSFA; HET: MSE CMP; 2.10A {Homo sapiens} PDB: 2zmf_A*
Probab=23.78 E-value=65 Score=20.27 Aligned_cols=17 Identities=24% Similarity=0.388 Sum_probs=13.9
Q ss_pred CEEEEEeCCCCCeeEEEEeH
Q 033339 93 GALVVVKPGEQKSVAGIITE 112 (121)
Q Consensus 93 ~~lpVvd~~~~~~lvGiVt~ 112 (121)
=++|+.. +|+++|++..
T Consensus 130 l~vPl~~---~~~~iGvl~l 146 (189)
T 2e4s_A 130 LCMPIVS---RGSVIGVVQM 146 (189)
T ss_dssp EEEEEEE---TTEEEEEEEE
T ss_pred EEEEecc---CCeEEEEEEE
Confidence 3789996 8999999874
No 162
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=23.44 E-value=1.3e+02 Score=18.35 Aligned_cols=35 Identities=6% Similarity=0.222 Sum_probs=22.5
Q ss_pred HHHHHHhcCCCEEEEEeCCCCCeeEEE-EeHHHHHHHh
Q 033339 83 AVKSMTQHNVGALVVVKPGEQKSVAGI-ITERGIFKAC 119 (121)
Q Consensus 83 a~~~m~~~~~~~lpVvd~~~~~~lvGi-Vt~~Di~~~~ 119 (121)
..+.+.-.++..+.++| ++|++++. ++..++...+
T Consensus 101 ~~~~~~v~~~P~~~lid--~~G~i~~~~~~~~~l~~~l 136 (152)
T 2lrn_A 101 VLESYCIVGFPHIILVD--PEGKIVAKELRGDDLYNTV 136 (152)
T ss_dssp HHHHTTCCSSCEEEEEC--TTSEEEEECCCTTHHHHHH
T ss_pred HHHHhCCCcCCeEEEEC--CCCeEEEeeCCHHHHHHHH
Confidence 33333344566777888 89999988 5666655543
No 163
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=23.24 E-value=47 Score=24.75 Aligned_cols=21 Identities=14% Similarity=0.131 Sum_probs=16.7
Q ss_pred cCCCEEEEEeCCCCCeeEEEEeH
Q 033339 90 HNVGALVVVKPGEQKSVAGIITE 112 (121)
Q Consensus 90 ~~~~~lpVvd~~~~~~lvGiVt~ 112 (121)
.+-+.=|++| .+|+++||.|.
T Consensus 184 ~GnSGGPLvn--~~G~vVGI~s~ 204 (345)
T 3stj_A 184 RGNSGGALLN--LNGELIGINTA 204 (345)
T ss_dssp TTCTTCEEEC--TTSCEEEEEEE
T ss_pred CCcCccceeC--CCCEEEEEEec
Confidence 4556679998 78999999874
No 164
>2w3g_A DOSS, two component sensor histidine kinase DEVS (GAF family protein); redox sensor, heme, hypoxia, GAF domain, transferase; HET: HEM; 1.40A {Mycobacterium tuberculosis} PDB: 2w3d_A* 2w3f_A* 2w3e_A* 2w3h_A* 2y79_A* 2y8h_A* 2vzw_A*
Probab=23.06 E-value=72 Score=19.06 Aligned_cols=17 Identities=12% Similarity=-0.021 Sum_probs=13.5
Q ss_pred CEEEEEeCCCCCeeEEEEeH
Q 033339 93 GALVVVKPGEQKSVAGIITE 112 (121)
Q Consensus 93 ~~lpVvd~~~~~~lvGiVt~ 112 (121)
=++|+.. +++++|++..
T Consensus 99 l~vPl~~---~~~~~Gvl~l 115 (153)
T 2w3g_A 99 LGVPVRV---RDESFGTLYL 115 (153)
T ss_dssp EEEEEEE---TTEEEEEEEE
T ss_pred EEeeEEE---CCEEEEEEEE
Confidence 3688885 7899999864
No 165
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=22.80 E-value=49 Score=21.26 Aligned_cols=18 Identities=17% Similarity=0.263 Sum_probs=13.8
Q ss_pred CCEEEEEeCCCCCeeEEEEe
Q 033339 92 VGALVVVKPGEQKSVAGIIT 111 (121)
Q Consensus 92 ~~~lpVvd~~~~~~lvGiVt 111 (121)
+...||.| ++|+++|+|.
T Consensus 108 v~~~Pi~d--~~G~~~G~ve 125 (151)
T 2qkp_A 108 VTYAAVRD--QAGDFQGVLE 125 (151)
T ss_dssp EEEEEEEC--TTCCEEEEEE
T ss_pred EEEEEEEC--CCCCEEEEEE
Confidence 34678887 6899999884
No 166
>3oov_A Methyl-accepting chemotaxis protein, putative; structural genomics, PSI-2, protein structure initiative; 2.20A {Geobacter sulfurreducens}
Probab=22.59 E-value=73 Score=19.48 Aligned_cols=20 Identities=10% Similarity=0.125 Sum_probs=15.1
Q ss_pred CCCEEEEEeCCCCCeeEEEEeHH
Q 033339 91 NVGALVVVKPGEQKSVAGIITER 113 (121)
Q Consensus 91 ~~~~lpVvd~~~~~~lvGiVt~~ 113 (121)
..=++|+.. +|+++|++...
T Consensus 114 s~l~vPl~~---~~~~iGvl~~~ 133 (169)
T 3oov_A 114 SFVICPIVV---KGEAIGVFAVD 133 (169)
T ss_dssp SEEEEEEEE---TTEEEEEEEEE
T ss_pred cEEEEEEEe---CCcEEEEEEEE
Confidence 445689886 78999998643
No 167
>3ksh_A Putative uncharacterized protein; FRMSR, free-Met-R-SO, oxidoreductase; 1.50A {Staphylococcus aureus} SCOP: d.110.2.0 PDB: 3ksf_A 3ksi_A 3ksg_A*
Probab=22.42 E-value=71 Score=21.20 Aligned_cols=17 Identities=12% Similarity=0.307 Sum_probs=14.1
Q ss_pred CEEEEEeCCCCCeeEEEEeH
Q 033339 93 GALVVVKPGEQKSVAGIITE 112 (121)
Q Consensus 93 ~~lpVvd~~~~~~lvGiVt~ 112 (121)
-++|+.. +|+++|++..
T Consensus 116 i~VPI~~---~g~viGVL~i 132 (160)
T 3ksh_A 116 IVVPIFK---DDKIIGVLDI 132 (160)
T ss_dssp EEEEEEE---TTEEEEEEEE
T ss_pred EEEEEEE---CCEEEEEEEE
Confidence 3789986 7999999975
No 168
>3mmh_A FRMSR, methionine-R-sulfoxide reductase; oxidoreductase; HET: SME MRD; 1.25A {Neisseria meningitidis} SCOP: d.110.2.0
Probab=22.11 E-value=72 Score=21.12 Aligned_cols=17 Identities=6% Similarity=0.176 Sum_probs=13.9
Q ss_pred CEEEEEeCCCCCeeEEEEeH
Q 033339 93 GALVVVKPGEQKSVAGIITE 112 (121)
Q Consensus 93 ~~lpVvd~~~~~~lvGiVt~ 112 (121)
=++|+.. +|+++|++..
T Consensus 117 i~vPi~~---~g~viGVL~i 133 (167)
T 3mmh_A 117 IVVPLFS---DGRCIGVLDA 133 (167)
T ss_dssp EEEEEEE---TTEEEEEEEE
T ss_pred EEEEecc---CCEEEEEEEE
Confidence 3689986 7899999975
No 169
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1
Probab=22.08 E-value=53 Score=23.32 Aligned_cols=20 Identities=25% Similarity=0.207 Sum_probs=15.7
Q ss_pred CCCEEEEEeCCCCCeeEEEEeH
Q 033339 91 NVGALVVVKPGEQKSVAGIITE 112 (121)
Q Consensus 91 ~~~~lpVvd~~~~~~lvGiVt~ 112 (121)
+-+.=|+++ .+++++||+|.
T Consensus 167 GdSGGPLv~--~~g~lvGIvS~ 186 (268)
T 1wcz_A 167 GNSGSPVFN--EKNEVIGIHWG 186 (268)
T ss_dssp TCTTCEEEC--TTSCEEEEEEE
T ss_pred CCccCeEEc--cCCEEEEEEeC
Confidence 455668887 68899999985
No 170
>3rfb_A Putative uncharacterized protein; FRMSR, GAF, oxidoreductase, SME; HET: SME; 2.30A {Streptococcus pneumoniae}
Probab=21.85 E-value=73 Score=21.44 Aligned_cols=18 Identities=11% Similarity=0.220 Sum_probs=14.5
Q ss_pred CEEEEEeCCCCCeeEEEEeHH
Q 033339 93 GALVVVKPGEQKSVAGIITER 113 (121)
Q Consensus 93 ~~lpVvd~~~~~~lvGiVt~~ 113 (121)
=++|+.. +|+++|++...
T Consensus 117 i~VPI~~---~g~viGVL~i~ 134 (171)
T 3rfb_A 117 IVVPMMK---NGQLLGVLDLD 134 (171)
T ss_dssp EEEEEEE---TTEEEEEEEEE
T ss_pred EEEEEEE---CCEEEEEEEEe
Confidence 4789986 79999999753
No 171
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=21.32 E-value=57 Score=18.47 Aligned_cols=34 Identities=12% Similarity=-0.060 Sum_probs=24.0
Q ss_pred HHHHhcCCCEEEEEeCCCCCeeEEEEeHHHHHHHhh
Q 033339 85 KSMTQHNVGALVVVKPGEQKSVAGIITERGIFKACH 120 (121)
Q Consensus 85 ~~m~~~~~~~lpVvd~~~~~~lvGiVt~~Di~~~~~ 120 (121)
.+...++...+|++- .+|+.+|=.+...+.+.+.
T Consensus 58 ~l~~~~g~~~vP~l~--~~g~~i~G~~~~~l~~~l~ 91 (92)
T 3ic4_A 58 KVHSISGSYSVPVVV--KGDKHVLGYNEEKLKELIR 91 (92)
T ss_dssp HHHHHHSSSCSCEEE--ETTEEEESCCHHHHHHHHH
T ss_pred HHHHhcCCCCcCEEE--ECCEEEeCCCHHHHHHHhc
Confidence 344567788899886 4677777678888877653
No 172
>2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A*
Probab=20.41 E-value=94 Score=21.02 Aligned_cols=30 Identities=17% Similarity=0.277 Sum_probs=19.6
Q ss_pred HHHHHHHhcCCCEEEEEeCCCCCeeEEEEeHHH
Q 033339 82 DAVKSMTQHNVGALVVVKPGEQKSVAGIITERG 114 (121)
Q Consensus 82 ea~~~m~~~~~~~lpVvd~~~~~~lvGiVt~~D 114 (121)
+.+......+...+.|.- +++++|+|...|
T Consensus 155 ~~~~~~~~~G~T~V~vai---dg~l~g~iavaD 184 (185)
T 2kmv_A 155 DFMTEHERKGRTAVLVAV---DDELCGLIAIAD 184 (185)
T ss_dssp HHHHHHHHTTCEEEEEEE---TTEEEEEEEEEC
T ss_pred HHHHHHHhCCCeEEEEEE---CCEEEEEEEEEc
Confidence 334444555655565553 789999998765
No 173
>3hcy_A Putative two-component sensor histidine kinase PR; two-component sensor histidine kinase protein, structural GE PSI, MCSG; 2.80A {Sinorhizobium meliloti}
Probab=20.38 E-value=74 Score=19.32 Aligned_cols=24 Identities=17% Similarity=0.329 Sum_probs=16.1
Q ss_pred HHHhcCC---CEEEEEeCCCCCeeEEEEeH
Q 033339 86 SMTQHNV---GALVVVKPGEQKSVAGIITE 112 (121)
Q Consensus 86 ~m~~~~~---~~lpVvd~~~~~~lvGiVt~ 112 (121)
.+...++ =++|+.. +|+++|+++.
T Consensus 84 ~~~~~g~~s~~~vPl~~---~~~~iGvl~~ 110 (151)
T 3hcy_A 84 SIVGEGIAALGFFPLVT---EGRLIGKFMT 110 (151)
T ss_dssp HHHHHTCCEEEEEEEES---SSSEEEEEEE
T ss_pred HHHhcCchheEEeceEE---CCEEEEEEEE
Confidence 3444444 4678885 8899998864
Done!