Query 033340
Match_columns 121
No_of_seqs 34 out of 36
Neff 3.8
Searched_HMMs 13730
Date Mon Mar 25 21:13:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033340.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/033340hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1fxkc_ a.2.5.1 (C:) Prefoldin 72.4 9.5 0.00069 24.4 7.8 36 75-110 83-118 (133)
2 d2p5ka1 a.4.5.3 (A:2-64) Argin 46.1 0.81 5.9E-05 28.0 -1.9 34 77-112 20-53 (63)
3 d1rfma_ c.122.1.1 (A:) L-sulfo 42.2 21 0.0016 26.9 5.6 31 38-70 275-305 (344)
4 d2acva1 c.87.1.10 (A:3-463) Tr 39.7 14 0.001 25.8 3.8 32 19-54 409-440 (461)
5 d1ez3a_ a.47.2.1 (A:) Syntaxin 39.0 10 0.00076 24.0 2.8 36 19-54 42-77 (124)
6 d1z6om1 a.25.1.1 (M:1-191) (Ap 36.6 34 0.0024 23.5 5.5 84 2-100 73-165 (191)
7 d1b4aa1 a.4.5.3 (A:4-78) Argin 35.9 1.3 9.4E-05 27.9 -2.2 34 77-112 18-51 (75)
8 d2pq6a1 c.87.1.10 (A:8-480) (I 32.0 16 0.0012 25.5 3.1 40 10-53 407-450 (473)
9 d1r73a_ a.2.2.1 (A:) Ribosomal 29.8 23 0.0017 20.9 3.1 39 50-92 26-64 (66)
10 d1z5za1 c.37.1.19 (A:663-906) 28.9 46 0.0034 22.5 5.1 42 13-55 7-49 (244)
11 d1euma_ a.25.1.1 (A:) Non-hem 27.1 42 0.003 21.8 4.4 27 74-100 112-138 (161)
12 d2c2aa1 a.30.2.1 (A:232-320) S 26.7 27 0.002 20.3 3.1 34 21-58 55-88 (89)
13 d2j5pa1 a.4.5.67 (A:1261-1329) 25.1 9.1 0.00067 23.6 0.5 12 2-13 40-51 (69)
14 d1vlga_ a.25.1.1 (A:) Non-hem 24.3 50 0.0037 21.4 4.4 27 74-100 115-141 (164)
15 d1ofcx2 a.4.1.13 (X:851-978) S 23.7 20 0.0014 24.2 2.2 17 36-52 97-113 (128)
16 d1jhfa1 a.4.5.2 (A:2-72) LexA 23.7 12 0.00086 22.2 0.9 11 2-12 44-54 (71)
17 d2ve8a1 a.4.5.67 (A:745-811) D 21.2 14 0.001 22.5 0.9 14 2-15 37-50 (67)
18 d1k1fa_ a.147.1.1 (A:) Bcr-Abl 20.5 61 0.0044 19.7 3.8 31 72-102 22-52 (67)
No 1
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=72.45 E-value=9.5 Score=24.44 Aligned_cols=36 Identities=17% Similarity=0.314 Sum_probs=30.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 033340 75 EQSLADMQEVLQQQTEAIARLGNVLKRDIRDMEIIM 110 (121)
Q Consensus 75 ~~sl~emk~~L~qQqeaia~L~~Vlk~D~rDl~iI~ 110 (121)
+-+.++-.+||...-+.+....+.+..++.+++-..
T Consensus 83 E~~~~eA~~~l~~ri~~l~~~~~~l~~~~~~~~~~i 118 (133)
T d1fxkc_ 83 KKNFEDAMESIKSQKNELESTLQKMGENLRAITDIM 118 (133)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eecHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467889999999999999999999999988876443
No 2
>d2p5ka1 a.4.5.3 (A:2-64) Arginine repressor (ArgR), N-terminal DNA-binding domain {Bacillus subtilis [TaxId: 1423]}
Probab=46.07 E-value=0.81 Score=27.95 Aligned_cols=34 Identities=15% Similarity=0.391 Sum_probs=28.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHh
Q 033340 77 SLADMQEVLQQQTEAIARLGNVLKRDIRDMEIIMAE 112 (121)
Q Consensus 77 sl~emk~~L~qQqeaia~L~~Vlk~D~rDl~iI~~~ 112 (121)
+++|+.+.|..+ |+..=+.+|-||+++|.+++--
T Consensus 20 tQ~eL~~~L~~~--G~~vTQaTlSRDL~eLg~vKv~ 53 (63)
T d2p5ka1 20 TQDELVDMLKQD--GYKVTQATVSRDIKELHLVKVP 53 (63)
T ss_dssp SHHHHHHHHHHT--TCCCCHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHc--CCCeeHHHHHHHHHHhCCEEee
Confidence 478888888877 8888889999999999988743
No 3
>d1rfma_ c.122.1.1 (A:) L-sulfolactate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=42.20 E-value=21 Score=26.93 Aligned_cols=31 Identities=29% Similarity=0.464 Sum_probs=22.8
Q ss_pred chhhHHHHHHHHHHHHhhhcccCCCCCccCCCc
Q 033340 38 GAELSRRVQNLLTVSRVQANSIGAGGSICLPGS 70 (121)
Q Consensus 38 p~qfkgRl~eLls~~Rmq~~~~~~~g~~~~~~~ 70 (121)
...|+.|+..++..+|-... +.+..||+|+.
T Consensus 275 ~~~f~~~~~~~~~~ir~s~~--~~g~~V~lPGe 305 (344)
T d1rfma_ 275 KEEFKRKVDELLDEIKNSEP--AEGFEILIPGE 305 (344)
T ss_dssp HHHHHHHHHHHHHHHHTSCB--CSSCCCCCTTH
T ss_pred HHHHHHHHHHHHHHHHcCCC--CCCCeeeCCCc
Confidence 45799999999988886433 44557899983
No 4
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]}
Probab=39.67 E-value=14 Score=25.85 Aligned_cols=32 Identities=19% Similarity=0.318 Sum_probs=21.6
Q ss_pred hHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHh
Q 033340 19 GEVELAEKLASITRQLKGSGAELSRRVQNLLTVSRV 54 (121)
Q Consensus 19 eEe~L~~rL~~i~~ql~gap~qfkgRl~eLls~~Rm 54 (121)
..++|++.+.. .|. .+..|+.|+.+|-..+|.
T Consensus 409 t~~~l~~a~~~---vl~-~d~~~r~~a~~l~~~~r~ 440 (461)
T d2acva1 409 AAEEIEKGLKD---LMD-KDSIVHKKVQEMKEMSRN 440 (461)
T ss_dssp CHHHHHHHHHH---HTC-TTCTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHH---Hhh-CCHHHHHHHHHHHHHHHH
Confidence 44667766444 344 556699999998877773
No 5
>d1ez3a_ a.47.2.1 (A:) Syntaxin 1A N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=39.00 E-value=10 Score=24.05 Aligned_cols=36 Identities=8% Similarity=0.213 Sum_probs=30.6
Q ss_pred hHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHh
Q 033340 19 GEVELAEKLASITRQLKGSGAELSRRVQNLLTVSRV 54 (121)
Q Consensus 19 eEe~L~~rL~~i~~ql~gap~qfkgRl~eLls~~Rm 54 (121)
.+..+..+|+.+..+++.-...++.||.+|=...+-
T Consensus 42 ~~~~~~~~l~~~~~~i~~~a~~ik~~Lk~l~~~~~~ 77 (124)
T d1ez3a_ 42 PDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQ 77 (124)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456789999999999987888999999999777664
No 6
>d1z6om1 a.25.1.1 (M:1-191) (Apo)ferritin {Cabbage looper(Trichoplusia ni), H chain [TaxId: 7111]}
Probab=36.60 E-value=34 Score=23.51 Aligned_cols=84 Identities=11% Similarity=0.150 Sum_probs=47.4
Q ss_pred hhhhhhhccCCCCC-------C-CchHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHhhhcccCCCCCccCCCcccc
Q 033340 2 RIVEALESKGCRLP-------L-MKGEVELAEKLASITRQLKGSGAELSRRVQNLLTVSRVQANSIGAGGSICLPGSTKI 73 (121)
Q Consensus 2 r~v~ale~~g~~~~-------L-~~eEe~L~~rL~~i~~ql~gap~qfkgRl~eLls~~Rmq~~~~~~~g~~~~~~~~kl 73 (121)
++++-+-.||-++. . .|.......-++++...+. ---....++++|...++- .+-.-
T Consensus 73 kl~~Yl~~RGg~v~~~~~~~~~~~~~~~~~~s~l~a~~~AL~-~Ek~vt~~i~~L~~~A~~--------------~~d~~ 137 (191)
T d1z6om1 73 KLIEYLLMRGELTNDVSSLLQVRPPTRSSWKGGVEALEHALS-MESDVTKSIRNVIKACED--------------DSEFN 137 (191)
T ss_dssp HHHHHHHHTTCCSSCCGGGCCCCCCSCCCCSSHHHHHHHHHH-HHHHHHHHHHHHHHHHHH--------------CTTCC
T ss_pred HHHHHHHHcCCcccccccccCCCCCCccccCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHh--------------ccccC
Confidence 55666777775431 1 1222223334455555554 112234455555543332 12223
Q ss_pred ChhhHHHHHH-HHHHHHHHHHHHHHHHh
Q 033340 74 HEQSLADMQE-VLQQQTEAIARLGNVLK 100 (121)
Q Consensus 74 D~~sl~emk~-~L~qQqeaia~L~~Vlk 100 (121)
|+..+.-+.. ||..|.+.+..|++.+.
T Consensus 138 d~~~~~~le~~fl~eQve~~~~l~~~~~ 165 (191)
T d1z6om1 138 DYHLVDYLTGDFLEEQYKGQRDLAGKAS 165 (191)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888766 99999999999988765
No 7
>d1b4aa1 a.4.5.3 (A:4-78) Arginine repressor (ArgR), N-terminal DNA-binding domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=35.92 E-value=1.3 Score=27.85 Aligned_cols=34 Identities=15% Similarity=0.381 Sum_probs=28.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHh
Q 033340 77 SLADMQEVLQQQTEAIARLGNVLKRDIRDMEIIMAE 112 (121)
Q Consensus 77 sl~emk~~L~qQqeaia~L~~Vlk~D~rDl~iI~~~ 112 (121)
+++|+.+.|..+ |+..=+.+|-||+++|.+++--
T Consensus 18 tQ~eL~~~L~~~--Gi~vTQaTlSRDL~eLg~vKv~ 51 (75)
T d1b4aa1 18 TQDELVDRLREA--GFNVTQATVSRDIKEMQLVKVP 51 (75)
T ss_dssp SHHHHHHHHHHT--TCCCCHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHc--CCceeHHHHHHHHHHhCCEEee
Confidence 577888888776 8888899999999999998743
No 8
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]}
Probab=31.99 E-value=16 Score=25.48 Aligned_cols=40 Identities=10% Similarity=0.175 Sum_probs=26.6
Q ss_pred cCCCCCCCc--hHHHHHHHHHHHHHHhccCc--hhhHHHHHHHHHHHH
Q 033340 10 KGCRLPLMK--GEVELAEKLASITRQLKGSG--AELSRRVQNLLTVSR 53 (121)
Q Consensus 10 ~g~~~~L~~--eEe~L~~rL~~i~~ql~gap--~qfkgRl~eLls~~R 53 (121)
.|+|+.|.+ .+++|+..+..+ |+ .| .++++|..+|-..+|
T Consensus 407 ~G~G~~l~~~~t~~~l~~ai~~v---l~-d~~~~~~r~~a~~l~~~~~ 450 (473)
T d2pq6a1 407 WEIGMEIDTNVKREELAKLINEV---IA-GDKGKKMKQKAMELKKKAE 450 (473)
T ss_dssp SCCEEECCSSCCHHHHHHHHHHH---HT-SHHHHHHHHHHHHHHHHHH
T ss_pred cCeEEeeCCCcCHHHHHHHHHHH---Hc-CChHHHHHHHHHHHHHHHH
Confidence 466665543 567777665544 44 33 469999999888877
No 9
>d1r73a_ a.2.2.1 (A:) Ribosomal protein L29 (L29p) {Thermotoga maritima [TaxId: 2336]}
Probab=29.78 E-value=23 Score=20.88 Aligned_cols=39 Identities=15% Similarity=0.186 Sum_probs=26.9
Q ss_pred HHHHhhhcccCCCCCccCCCccccChhhHHHHHHHHHHHHHHH
Q 033340 50 TVSRVQANSIGAGGSICLPGSTKIHEQSLADMQEVLQQQTEAI 92 (121)
Q Consensus 50 s~~Rmq~~~~~~~g~~~~~~~~klD~~sl~emk~~L~qQqeai 92 (121)
-..|+|...+.... |...+--....+.|+.+|++..-++
T Consensus 26 ~~LRfq~~~gql~~----~~~i~~~Rk~IARi~Tvl~er~~~~ 64 (66)
T d1r73a_ 26 MELRFQLAMGQLKN----TSLIKLTKRDIARIKTILRERELGI 64 (66)
T ss_dssp HHHHHHHHHTCCCC----HHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHCCCCC----hHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 35788877655555 3666677777888888888776544
No 10
>d1z5za1 c.37.1.19 (A:663-906) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=28.91 E-value=46 Score=22.54 Aligned_cols=42 Identities=12% Similarity=0.087 Sum_probs=26.8
Q ss_pred CCCCCchHHHHHHHHHHHH-HHhccCchhhHHHHHHHHHHHHhh
Q 033340 13 RLPLMKGEVELAEKLASIT-RQLKGSGAELSRRVQNLLTVSRVQ 55 (121)
Q Consensus 13 ~~~L~~eEe~L~~rL~~i~-~ql~gap~qfkgRl~eLls~~Rmq 55 (121)
-++|||++.+++.++..-. ..+. .....++..+-|-...|++
T Consensus 7 ~~~ls~~Q~~~Y~~~~~~~~~~~~-~~~~~~~~~~iL~~l~~Lr 49 (244)
T d1z5za1 7 YCNLTPEQAAMYKAEVENLFNNID-SVTGIKRKGMILSTLLKLK 49 (244)
T ss_dssp EECCCHHHHHHHHHHHHHHHHHTT-TCCHHHHHHHHHHHHHHHH
T ss_pred EeCCCHHHHHHHHHHHHHHHHHHh-hcccchhHHHHHHHHHHHH
Confidence 3689999999998776544 3445 5555555555444445664
No 11
>d1euma_ a.25.1.1 (A:) Non-hem ferritin {Escherichia coli, FtnA [TaxId: 562]}
Probab=27.10 E-value=42 Score=21.81 Aligned_cols=27 Identities=11% Similarity=0.112 Sum_probs=22.1
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHh
Q 033340 74 HEQSLADMQEVLQQQTEAIARLGNVLK 100 (121)
Q Consensus 74 D~~sl~emk~~L~qQqeaia~L~~Vlk 100 (121)
|+.+..=+..||..|.+-+..+.+++.
T Consensus 112 D~~t~~fl~~fl~eQ~e~~~~~~~~l~ 138 (161)
T d1euma_ 112 DYPTFNFLQWYVSEQHEEEKLFKSIID 138 (161)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788888888888888888888877765
No 12
>d2c2aa1 a.30.2.1 (A:232-320) Sensor histidine kinase TM0853 {Thermotoga maritima [TaxId: 2336]}
Probab=26.70 E-value=27 Score=20.29 Aligned_cols=34 Identities=32% Similarity=0.367 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHhhhcc
Q 033340 21 VELAEKLASITRQLKGSGAELSRRVQNLLTVSRVQANS 58 (121)
Q Consensus 21 e~L~~rL~~i~~ql~gap~qfkgRl~eLls~~Rmq~~~ 58 (121)
+..+.-+..+..+.. .+..-++.||..+|+.++.
T Consensus 55 ~~~~~~l~~i~~~~~----rl~~li~~lLd~srle~g~ 88 (89)
T d2c2aa1 55 STLKEFLEVIIDQSN----HLENLLNELLDFSRLERKS 88 (89)
T ss_dssp TTTHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHcCC
Confidence 344556777776655 7999999999999998764
No 13
>d2j5pa1 a.4.5.67 (A:1261-1329) DNA translocase FtsK {Escherichia coli [TaxId: 562]}
Probab=25.12 E-value=9.1 Score=23.58 Aligned_cols=12 Identities=42% Similarity=0.769 Sum_probs=10.6
Q ss_pred hhhhhhhccCCC
Q 033340 2 RIVEALESKGCR 13 (121)
Q Consensus 2 r~v~ale~~g~~ 13 (121)
||||.||..|+=
T Consensus 40 riid~LE~~GiV 51 (69)
T d2j5pa1 40 RIIEQMEAQGIV 51 (69)
T ss_dssp HHHHHHHHHTSB
T ss_pred HHHHHHHHCCcC
Confidence 899999999874
No 14
>d1vlga_ a.25.1.1 (A:) Non-hem ferritin {Thermotoga maritima [TaxId: 2336]}
Probab=24.26 E-value=50 Score=21.43 Aligned_cols=27 Identities=11% Similarity=0.238 Sum_probs=21.0
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHh
Q 033340 74 HEQSLADMQEVLQQQTEAIARLGNVLK 100 (121)
Q Consensus 74 D~~sl~emk~~L~qQqeaia~L~~Vlk 100 (121)
|+.+..=+..||..|.+-+..+.+.+.
T Consensus 115 D~~t~~fl~~fl~eQ~e~~~~l~~~l~ 141 (164)
T d1vlga_ 115 DHATVSFLKWFVDEQVEEEDQVREILD 141 (164)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777788888888888888887777654
No 15
>d1ofcx2 a.4.1.13 (X:851-978) SLIDE domain of the nucleosome remodeling ATPase ISWI {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=23.72 E-value=20 Score=24.24 Aligned_cols=17 Identities=35% Similarity=0.540 Sum_probs=14.4
Q ss_pred cCchhhHHHHHHHHHHH
Q 033340 36 GSGAELSRRVQNLLTVS 52 (121)
Q Consensus 36 gap~qfkgRl~eLls~~ 52 (121)
-+|.+|++|++.|+..+
T Consensus 97 Rt~~el~rR~~tLi~~i 113 (128)
T d1ofcx2 97 RTALELQRRCNTLITLI 113 (128)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 46779999999999875
No 16
>d1jhfa1 a.4.5.2 (A:2-72) LexA repressor, N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=23.70 E-value=12 Score=22.21 Aligned_cols=11 Identities=36% Similarity=0.522 Sum_probs=9.3
Q ss_pred hhhhhhhccCC
Q 033340 2 RIVEALESKGC 12 (121)
Q Consensus 2 r~v~ale~~g~ 12 (121)
++|++||.+||
T Consensus 44 ~~l~~Le~kG~ 54 (71)
T d1jhfa1 44 EHLKALARKGV 54 (71)
T ss_dssp HHHHHHHHTTS
T ss_pred HHHHHHHHCcC
Confidence 57889999987
No 17
>d2ve8a1 a.4.5.67 (A:745-811) DNA translocase FtsK {Pseudomonas aeruginosa [TaxId: 287]}
Probab=21.23 E-value=14 Score=22.47 Aligned_cols=14 Identities=43% Similarity=0.757 Sum_probs=11.2
Q ss_pred hhhhhhhccCCCCC
Q 033340 2 RIVEALESKGCRLP 15 (121)
Q Consensus 2 r~v~ale~~g~~~~ 15 (121)
||||.||..|+=-|
T Consensus 37 riid~LE~~GiVsp 50 (67)
T d2ve8a1 37 RMIEAMEMAGVVTP 50 (67)
T ss_dssp HHHHHHHHTTSBCC
T ss_pred HHHHHHHHCcCCCC
Confidence 89999999987433
No 18
>d1k1fa_ a.147.1.1 (A:) Bcr-Abl oncoprotein oligomerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.51 E-value=61 Score=19.74 Aligned_cols=31 Identities=19% Similarity=0.459 Sum_probs=28.6
Q ss_pred ccChhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 033340 72 KIHEQSLADMQEVLQQQTEAIARLGNVLKRD 102 (121)
Q Consensus 72 klD~~sl~emk~~L~qQqeaia~L~~Vlk~D 102 (121)
++.=.|+.+|.+-|..++.-|.+|..+|++.
T Consensus 22 ~m~l~sV~diE~eLerCk~~irrLeqel~~E 52 (67)
T d1k1fa_ 22 RMELRSVGDIEQELERAKASIRRLEQEVNQE 52 (67)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhccHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6888899999999999999999999999874
Done!