BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033342
(121 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q86X76|NIT1_HUMAN Nitrilase homolog 1 OS=Homo sapiens GN=NIT1 PE=1 SV=2
Length = 327
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 73/116 (62%), Gaps = 3/116 (2%)
Query: 9 VAVAQMTSINDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGP 68
VAV Q+TS D NF TC+ LV+EAA GA L PE F ++ A+ + ++EPL G
Sbjct: 49 VAVCQVTSTPDKQQNFKTCAELVREAARLGACLAFLPEAFDFIARDPAETLHLSEPLGGK 108
Query: 69 IMQGYCSLARESSMWLSLGGFQEKGSD---DARLCNTHVLLDDAGNIRSTYRKIHL 121
+++ Y LARE +WLSLGGF E+G D ++ N HVLL+ G + +TYRK HL
Sbjct: 109 LLEEYTQLARECGLWLSLGGFHERGQDWEQTQKIYNCHVLLNSKGAVVATYRKTHL 164
>sp|Q32LH4|NIT1_BOVIN Nitrilase homolog 1 OS=Bos taurus GN=NIT1 PE=2 SV=1
Length = 328
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 74/116 (63%), Gaps = 3/116 (2%)
Query: 9 VAVAQMTSINDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGP 68
VAV Q+TS D NF TC+ L++EAA GA L PE F ++ + +++EPL G
Sbjct: 50 VAVCQVTSTPDKEQNFKTCAELIREAARLGACLAFLPEAFDFIARDPEETRRLSEPLSGN 109
Query: 69 IMQGYCSLARESSMWLSLGGFQEKGSD---DARLCNTHVLLDDAGNIRSTYRKIHL 121
+++ Y LARE +WLSLGGF E+G D ++ N HV++++ G++ +TYRK HL
Sbjct: 110 LLEEYTQLARECGLWLSLGGFHERGQDWEQTQKIYNCHVIMNNMGSVVATYRKTHL 165
>sp|Q8VDK1|NIT1_MOUSE Nitrilase homolog 1 OS=Mus musculus GN=Nit1 PE=2 SV=2
Length = 323
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 75/116 (64%), Gaps = 3/116 (2%)
Query: 9 VAVAQMTSINDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGP 68
VAV Q+TS + NF TC+ LV+EAA GA L PE F ++ A+ + ++EPL+G
Sbjct: 45 VAVCQVTSTPNKQENFKTCAELVQEAARLGACLAFLPEAFDFIARNPAETLLLSEPLNGD 104
Query: 69 IMQGYCSLARESSMWLSLGGFQEKGSD---DARLCNTHVLLDDAGNIRSTYRKIHL 121
++ Y LARE +WLSLGGF E+G D + ++ N HVLL+ G++ ++YRK HL
Sbjct: 105 LLGQYSQLARECGIWLSLGGFHERGQDWEQNQKIYNCHVLLNSKGSVVASYRKTHL 160
>sp|Q7TQ94|NIT1_RAT Nitrilase homolog 1 OS=Rattus norvegicus GN=Nit1 PE=2 SV=1
Length = 292
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 73/116 (62%), Gaps = 3/116 (2%)
Query: 9 VAVAQMTSINDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGP 68
VAV Q+TS + NF TC+ LV+EA GA L PE F ++ A+ + ++EPLDG
Sbjct: 14 VAVCQVTSTPNKQENFKTCAELVQEATRLGACLAFLPEAFDFIARNPAETLLLSEPLDGD 73
Query: 69 IMQGYCSLARESSMWLSLGGFQEKGSD---DARLCNTHVLLDDAGNIRSTYRKIHL 121
++ Y LARE +WLSLGGF E+G D ++ N HVLL+ G++ ++YRK HL
Sbjct: 74 LLGQYSQLARECGIWLSLGGFHERGQDWEQTQKIYNCHVLLNSKGSVVASYRKTHL 129
>sp|O76464|NFT1_DROME Nitrilase and fragile histidine triad fusion protein NitFhit
OS=Drosophila melanogaster GN=NitFhit PE=1 SV=1
Length = 460
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 70/117 (59%), Gaps = 2/117 (1%)
Query: 5 HSVRVAVAQMTSINDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEP 64
S +AV QM S +D AAN + LV A S A +L PE +VG+ I+++E
Sbjct: 31 QSATIAVGQMRSTSDKAANLSQVIELVDRAKSQNACMLFLPECCDFVGESRTQTIELSEG 90
Query: 65 LDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYRKIHL 121
LDG +M Y LA+ + +W+SLGG E+ +D ++ N HVLL++ G + + YRK+H+
Sbjct: 91 LDGELMAQYRELAKCNKIWISLGGVHER--NDQKIFNAHVLLNEKGELAAVYRKLHM 145
>sp|O76463|NFT1_CAEEL Nitrilase and fragile histidine triad fusion protein NitFhit
OS=Caenorhabditis elegans GN=nft-1 PE=1 SV=1
Length = 440
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
Query: 9 VAVAQMTSINDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGP 68
+AV QMTS NDL NF +++ A +++ PE F ++G + I +A D
Sbjct: 17 IAVCQMTSDNDLEKNFQAAKNMIERAGEKKCEMVFLPECFDFIGLNKNEQIDLAMATDCE 76
Query: 69 IMQGYCSLARESSMWLSLGGFQEK-GSDDARLCNTHVLLDDAGNIRSTYRKIHL 121
M+ Y LAR+ ++WLSLGG K SD A NTH+++D G R+ Y K+HL
Sbjct: 77 YMEKYRELARKHNIWLSLGGLHHKDPSDAAHPWNTHLIIDSDGVTRAEYNKLHL 130
>sp|Q557J5|NIT1_DICDI Nitrilase homolog 1 OS=Dictyostelium discoideum GN=nit1-1 PE=3 SV=1
Length = 291
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 71/120 (59%), Gaps = 6/120 (5%)
Query: 8 RVAVAQMTSINDLAANFATCSRLVKEAASAGAKLLCFPENFSYV--GDKDADNIKIAEPL 65
R+ + Q+TS N+ NF C ++++A L C PE F+++ G ++ AE L
Sbjct: 14 RIGLGQITSTNNKEDNFRKCKEMIEKAVENKVNLFCLPECFAFISGGIHQFESRDNAEYL 73
Query: 66 D--GPIMQGYCSLARESSMWLSLGGFQEKGSDDAR--LCNTHVLLDDAGNIRSTYRKIHL 121
D G I++ Y LA+++++WLSLGGF EK DD + NTH+++D G I YRK+HL
Sbjct: 74 DQKGGIIERYKDLAKQNNIWLSLGGFHEKILDDPNDMIYNTHLIIDSNGVIVCEYRKMHL 133
>sp|Q11146|Y480_MYCTU UPF0012 hydrolase Rv0480c/MT0498 OS=Mycobacterium tuberculosis
GN=Rv0480c PE=3 SV=1
Length = 340
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 7 VRVAVAQMTSINDLAANFATCSRLVKEAASAGAKLLCFPE-NFSYVGDKDADNIKIAEPL 65
+R+A+AQ+ S D AAN + EAA+AGA+L+ FPE +G ++AEP+
Sbjct: 61 MRIALAQIRSGTDPAANLQLVGKYAGEAATAGAQLVVFPEATMCRLG---VPLRQVAEPV 117
Query: 66 DGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDA--GNIRSTYRKIHL 121
DGP G +A E+ + + G F G D R+ NT + + Y KIHL
Sbjct: 118 DGPWANGVRRIATEAGITVIAGMFTPTG--DGRVTNTLIAAGPGTPNQPDAHYHKIHL 173
>sp|Q10166|YAUB_SCHPO UPF0012 hydrolase C26A3.11 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=SPAC26A3.11 PE=3 SV=1
Length = 322
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 5/119 (4%)
Query: 5 HSVRVAVAQMTSINDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEP 64
+ R+ + Q+ + D + N V EAA G+ ++ PE F+ N + AEP
Sbjct: 42 RAFRIGLVQLANTKDKSENLQLARLKVLEAAKNGSNVIVLPEIFNSPYGTGYFN-QYAEP 100
Query: 65 LD--GPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYRKIHL 121
++ P Q S+A+++ +L G E+ D +L NT ++ D +G + + +RKIHL
Sbjct: 101 IEESSPSYQALSSMAKDTKTYLFGGSIPER--KDGKLYNTAMVFDPSGKLIAVHRKIHL 157
>sp|Q5R4L6|NIT2_PONAB Omega-amidase NIT2 OS=Pongo abelii GN=NIT2 PE=3 SV=1
Length = 275
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
Query: 6 SVRVAVAQM--TSINDLAANFATCSRLVKEAASAGAKLLCFPENF-SYVGDKDADNIKIA 62
S R+A+ Q+ +SIN + N ++EAA+ GAK++ PE F S G K + A
Sbjct: 3 SFRLALIQLQISSIN--SDNVTRACSFIREAATQGAKIVSLPECFNSPYGTKYFP--EYA 58
Query: 63 EPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYRKIHL 121
E + G Q +A+E S++L G E+ D +L NT + G + + YRKIHL
Sbjct: 59 EKIPGESTQKLSEVAKECSIYLIGGSIPEE--DAGKLYNTCAVFGPDGTLLAKYRKIHL 115
>sp|Q9NQR4|NIT2_HUMAN Omega-amidase NIT2 OS=Homo sapiens GN=NIT2 PE=1 SV=1
Length = 276
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Query: 6 SVRVAVAQMTSINDLAANFATCSRLVKEAASAGAKLLCFPENF-SYVGDKDADNIKIAEP 64
S R+A+ Q+ + + N ++EAA+ GAK++ PE F S G K + AE
Sbjct: 3 SFRLALIQLQISSIKSDNVTRACSFIREAATQGAKIVSLPECFNSPYGAKYFP--EYAEK 60
Query: 65 LDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYRKIHL 121
+ G Q +A+E S++L G E+ D +L NT + G + + YRKIHL
Sbjct: 61 IPGESTQKLSEVAKECSIYLIGGSIPEE--DAGKLYNTCAVFGPDGTLLAKYRKIHL 115
>sp|Q497B0|NIT2_RAT Omega-amidase NIT2 OS=Rattus norvegicus GN=Nit2 PE=1 SV=1
Length = 276
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Query: 6 SVRVAVAQMTSINDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPL 65
+ R+A+ Q+ + + N LV+EAA GA ++ PE F+ + + AE +
Sbjct: 3 TFRLALIQLQVSSIKSDNITRACSLVREAAKQGANIVSLPECFNSPYGTNYFP-EYAEKI 61
Query: 66 DGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYRKIHL 121
G + +A+E+S++L G E+ DD +L NT + GN+ +RKIHL
Sbjct: 62 PGESTKKLSEVAKENSIYLIGGSIPEE--DDGKLYNTCAVFGPDGNLLVKHRKIHL 115
>sp|Q4VBV9|NIT2_DANRE Omega-amidase NIT2 OS=Danio rerio GN=nit2 PE=2 SV=1
Length = 277
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Query: 8 RVAVAQMTSINDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDG 67
R+AV Q+ A N LVKEAA GAK++ PE F+ + AE + G
Sbjct: 5 RLAVVQLHVSKIKADNLGRAQTLVKEAAGQGAKVVVLPECFNSPYGTGFFK-EYAEKIPG 63
Query: 68 PIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYRKIHL 121
Q A++ ++L G E+ D +L NT + G + T+RKIHL
Sbjct: 64 ESTQVLSETAKKCGIYLVGGSIPEE--DGGKLYNTCSVFGPDGTLLVTHRKIHL 115
>sp|Q9JHW2|NIT2_MOUSE Omega-amidase NIT2 OS=Mus musculus GN=Nit2 PE=1 SV=1
Length = 276
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 15/122 (12%)
Query: 6 SVRVAVAQMTSINDLAANFATCSRLVKEAASAGAKLLCFPENF------SYVGDKDADNI 59
+ R+A+ Q+ + + N LV+EAA GA ++ PE F +Y D
Sbjct: 3 TFRLALIQLQVSSIKSDNLTRACSLVREAAKQGANIVSLPECFNSPYGTTYFPD------ 56
Query: 60 KIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYRKI 119
AE + G Q +A+ESS++L G E+ D +L NT + G++ +RKI
Sbjct: 57 -YAEKIPGESTQKLSEVAKESSIYLIGGSIPEE--DAGKLYNTCSVFGPDGSLLVKHRKI 113
Query: 120 HL 121
HL
Sbjct: 114 HL 115
>sp|Q2T9R6|NIT2_BOVIN Omega-amidase NIT2 OS=Bos taurus GN=NIT2 PE=2 SV=1
Length = 276
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
Query: 6 SVRVAVAQMTSINDLAANFATCSRLVKEAASAGAKLLCFPENF-SYVGDKDADNIKIAEP 64
+ R+A+ Q+ + + N L++EA+ GA+++ PE F S G K + AE
Sbjct: 3 TFRLALIQLQVSSIKSENLTRACGLIREASKQGAQIVSLPECFNSPYGTKYFPD--YAEK 60
Query: 65 LDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYRKIHL 121
+ G Q +A+E SM++ G EK D +L NT + G + +RK+HL
Sbjct: 61 IPGDSTQKLSEVAKECSMYVIGGSIPEK--DAGKLYNTCAVFGPDGTLLVKHRKLHL 115
>sp|P55175|Y601_SYNY3 UPF0012 hydrolase sll0601 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=sll0601 PE=3 SV=1
Length = 272
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Query: 10 AVAQMTSINDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPI 69
A QMTS +L N L+ A GA+L+ PENF+++G+ + + ++ A +
Sbjct: 7 AALQMTSRPNLTENLQEAEELIDLAVRQGAELVGLPENFAFLGN-ETEKLEQATAIATAT 65
Query: 70 MQGYCSLARESSMWLSLGGFQEKGSDDA-RLCNTHVLLDDAGNIRSTYRKIHL 121
+ ++A+ + + GGF + +A + NT L+ G + Y K+HL
Sbjct: 66 EKFLQTMAQRFQVTILAGGFPFPVAGEAGKAYNTATLIAPNGQELARYHKVHL 118
>sp|Q28IE5|NIT2_XENTR Omega-amidase NIT2 OS=Xenopus tropicalis GN=nit2 PE=2 SV=1
Length = 276
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Query: 8 RVAVAQMTSINDLAANFATCSRLVKEAASAGAKLLCFPENF-SYVGDKDADNIKIAEPLD 66
R+++ Q + N +L+KEAA GA+++ PE F S G K + AE +
Sbjct: 5 RLSLVQFLVSPVKSENLNRACKLIKEAAQKGAQIVALPECFNSPYGTKYFP--EYAEKIP 62
Query: 67 GPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYRKIHL 121
G + +A+E ++L G E+ D +L NT + G + +RKIHL
Sbjct: 63 GESTERLSQVAKECGIYLIGGSIPEE--DSGKLYNTCAVFGPDGTLLVKHRKIHL 115
>sp|O94660|NIT2_SCHPO Probable hydrolase nit2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=nit2 PE=3 SV=1
Length = 276
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 7/116 (6%)
Query: 10 AVAQMTSINDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPI 69
AVAQ+ S + N A C L+ +AA+ GAK + FPE ++ + I++ + P
Sbjct: 5 AVAQLNSSGSILKNLAICKELISQAAAKGAKCIFFPEASDFIAHNSDEAIELT---NHPD 61
Query: 70 MQGYCSLARESSMWLSLGG---FQEKGSDDARLCNTHVLLDDA-GNIRSTYRKIHL 121
+ RES+ S+ E +L N+ + ++ G I S Y K HL
Sbjct: 62 CSKFIRDVRESATKHSIFVNICVHEPSKVKNKLLNSSLFIEPLHGEIISRYSKAHL 117
>sp|Q54JM9|NIT2_DICDI Nitrilase homolog 2 OS=Dictyostelium discoideum GN=nit2 PE=3 SV=1
Length = 328
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Query: 1 MAGAHSV-RVAVAQMTSINDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNI 59
MA V + A Q+ ++ N + + EAA GAKL+ PE F+
Sbjct: 46 MADKEKVFKFAGIQLLCGDNKEENVQNAIKHIDEAAKNGAKLISLPECFNSPYSTSTFE- 104
Query: 60 KIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYRKI 119
K +E DG ++ A+ + ++L G E ++ NT + +D G + +RKI
Sbjct: 105 KYSETEDGETVKKLSEAAKRNQIFLVGGSIPEIDKATGKIYNTCFIFNDKGEVVKKHRKI 164
Query: 120 HL 121
HL
Sbjct: 165 HL 166
>sp|Q6INI7|NIT2B_XENLA Omega-amidase NIT2-B OS=Xenopus laevis GN=nit2b PE=2 SV=1
Length = 276
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Query: 8 RVAVAQMTSINDLAANFATCSRLVKEAASAGAKLLCFPENF-SYVGDKDADNIKIAEPLD 66
R+++ Q + N +L+KEAA GA+++ PE F S G K + AE +
Sbjct: 5 RLSLVQFLVSPVKSDNLNKACKLIKEAAQKGAQIVALPECFNSPYGTKYFP--EYAEKIP 62
Query: 67 GPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYRKIHL 121
G + +A+E ++L G E+ D + NT + G + +RKIHL
Sbjct: 63 GESTELLSQVAKECGIYLIGGSIPEE--DSGKFYNTCAVFGPDGTLLVKHRKIHL 115
>sp|P47016|NIT2_YEAST Probable hydrolase NIT2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=NIT2 PE=3 SV=1
Length = 307
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 10/124 (8%)
Query: 8 RVAVAQMTSINDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDG 67
RVAVAQ+ S DL N L+ EA A ++ PE Y+ + +A+
Sbjct: 7 RVAVAQLCSSADLTKNLKVVKELISEAIQKKADVVFLPEASDYLSQNPLHSRYLAQKSPK 66
Query: 68 PIMQGYCS---LARESS--MWLSLGGFQEKGSDDA-----RLCNTHVLLDDAGNIRSTYR 117
I Q S L R++S + +S+G D R+ N + +D G I Y+
Sbjct: 67 FIRQLQSSITDLVRDNSRNIDVSIGVHLPPSEQDLLEGNDRVRNVLLYIDHEGKILQEYQ 126
Query: 118 KIHL 121
K+HL
Sbjct: 127 KLHL 130
>sp|P60327|DCAS_AGRSK N-carbamoyl-D-amino acid hydrolase OS=Agrobacterium sp. (strain
KNK712) PE=1 SV=1
Length = 304
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 56/127 (44%), Gaps = 17/127 (13%)
Query: 9 VAVAQMTSINDLAANFATCSRLV---KEAASAGAKLLCFPE--------NFSYVGDKDAD 57
+AV Q I RL+ +AAS GA + FPE + + + + D
Sbjct: 7 LAVGQQGPIARAETREQVVVRLLDMLTKAASRGANFIVFPELALTTFFPRWHFTDEAELD 66
Query: 58 NIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQ---EKGSDDARLCNTHVLLDDAGNIRS 114
+ E + GP+++ A E + +LG + E G R NT +L+D +G I
Sbjct: 67 SFYETE-MPGPVVRPLFEKAAELGIGFNLGYAELVVEGGVK--RRFNTSILVDKSGKIVG 123
Query: 115 TYRKIHL 121
YRKIHL
Sbjct: 124 KYRKIHL 130
>sp|Q44185|DCAS_RHIRD N-carbamoyl-D-amino acid hydrolase OS=Rhizobium radiobacter PE=1
SV=1
Length = 304
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 17/127 (13%)
Query: 9 VAVAQMTSINDLAANFATCSRLV---KEAASAGAKLLCFPE--------NFSYVGDKDAD 57
+AV Q I RL+ AAS G + FPE + + + + D
Sbjct: 7 LAVGQQGPIARAETREQVVGRLLDMLTNAASRGVNFIVFPELALTTFFPRWHFTDEAELD 66
Query: 58 NIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQ---EKGSDDARLCNTHVLLDDAGNIRS 114
+ E + GP+++ A E + +LG + E G R NT +L+D +G I
Sbjct: 67 SFYETE-MPGPVVRPLFETAAELGIGFNLGYAELVVEGGVK--RRFNTSILVDKSGKIVG 123
Query: 115 TYRKIHL 121
YRKIHL
Sbjct: 124 KYRKIHL 130
>sp|P46010|NRL3_ARATH Nitrilase 3 OS=Arabidopsis thaliana GN=NIT3 PE=1 SV=1
Length = 346
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 6 SVRVAVAQMTSI-NDLAANFATCSRLVKEAASAGAKLLCFPENF 48
+VRV + Q +++ ND A + + EAAS GAKL+ FPE F
Sbjct: 24 TVRVTIVQSSTVYNDTPATLDKAEKFIVEAASKGAKLVLFPEAF 67
>sp|Q6H849|NRL4_ORYSJ Bifunctional nitrilase/nitrile hydratase NIT4 OS=Oryza sativa
subsp. japonica GN=NIT4 PE=2 SV=1
Length = 362
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 30/143 (20%)
Query: 2 AGAHSVRVAVAQMTSI-NDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKD----- 55
+GA +VR V Q +++ D A RL++EAA G++L+ FPE F VG
Sbjct: 26 SGAATVRATVVQASTVFYDTPATLDKAERLIEEAAGYGSQLVVFPEAF--VGGYPRGSTF 83
Query: 56 --ADNIKIAEPLD-----------------GPIMQGYCSLARESSMWLSLGGFQEKGSDD 96
NI I P D GP + ++A + ++L +G + +G
Sbjct: 84 GFGANISIGNPKDKGKEEFRKYHAAAIEVPGPEVTRLAAMAGKYKVFLVMGVIEREGYT- 142
Query: 97 ARLCNTHVLLDDAGNIRSTYRKI 119
L + + D G +RK+
Sbjct: 143 --LYCSVLFFDPLGRYLGKHRKL 163
>sp|Q42965|NRL4A_TOBAC Bifunctional nitrilase/nitrile hydratase NIT4A OS=Nicotiana tabacum
GN=NIT4A PE=2 SV=1
Length = 349
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 22/133 (16%)
Query: 6 SVRVAVAQMTSI-NDLAANFATCSRLVKEAASAGAKLLCFPENF-----------SYVGD 53
+VR V Q ++I D A RL+ EAAS GA+L+ FPE F +G+
Sbjct: 28 TVRATVVQASTIFYDTPATLVKAERLLAEAASYGAQLVVFPEAFIGGYPRGSTFGVSIGN 87
Query: 54 KDADNIK-------IAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLL 106
+ A + A + GP + ++A + ++L +G + G L T +
Sbjct: 88 RTAKGKEEFRKYHASAIDVPGPEVDRLAAMAGKYKVYLVMGVIERDGYT---LYCTVLFF 144
Query: 107 DDAGNIRSTYRKI 119
D G+ +RKI
Sbjct: 145 DSQGHFLGKHRKI 157
>sp|P32961|NRL1_ARATH Nitrilase 1 OS=Arabidopsis thaliana GN=NIT1 PE=1 SV=2
Length = 346
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 64/138 (46%), Gaps = 22/138 (15%)
Query: 1 MAGAHSVRVAVAQMTSI-NDLAANFATCSRLVKEAASAGAKLLCFPENF--SY------- 50
+A + +VRV + Q +++ ND A + + EAAS GA+L+ FPE F Y
Sbjct: 19 VAPSTTVRVTIVQSSTVYNDTPATIDKAEKYIVEAASKGAELVLFPEGFIGGYPRGFRFG 78
Query: 51 --VG---DKDADNIKI----AEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCN 101
VG ++ D + A + GP + +AR++ ++L +G +++G L
Sbjct: 79 LAVGVHNEEGRDEFRKYHASAIHVPGPEVARLADVARKNHVYLVMGAIEKEG---YTLYC 135
Query: 102 THVLLDDAGNIRSTYRKI 119
T + G +RK+
Sbjct: 136 TVLFFSPQGQFLGKHRKL 153
>sp|Q6IR61|NIT2A_XENLA Omega-amidase NIT2-A OS=Xenopus laevis GN=nit2a PE=2 SV=1
Length = 276
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Query: 23 NFATCSRLVKEAASAGAKLLCFPENF-SYVGDKDADNIKIAEPLDGPIMQGYCSLARESS 81
N +L+KEAA GA+++ PE F S G + AE + G + +A+E
Sbjct: 20 NLNRACKLIKEAAQKGAQIVALPECFNSPYGTTYFP--EYAEKIPGESTELLSQVAKECG 77
Query: 82 MWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYRKIHL 121
++L G E+ D +L NT + G + +RKIHL
Sbjct: 78 IYLIGGSIPEE--DCGKLYNTCAVFGPDGTLLVKHRKIHL 115
>sp|Q42966|NRL4B_TOBAC Bifunctional nitrilase/nitrile hydratase NIT4B OS=Nicotiana tabacum
GN=NIT4B PE=2 SV=1
Length = 348
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 22/133 (16%)
Query: 6 SVRVAVAQMTSI-NDLAANFATCSRLVKEAASAGAKLLCFPENF-----------SYVGD 53
+VR V Q ++I D A RL+ EAAS GA+L+ FPE F +G+
Sbjct: 28 TVRATVVQASTIFYDTPATLDKAERLLAEAASYGAQLVVFPEAFIGGYPRGSTFGVSIGN 87
Query: 54 KDADNIK-------IAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLL 106
+ A + A + GP + ++A + ++L +G + G L T +
Sbjct: 88 RTAKGKEEFRKYHASAIDVPGPEVDRLAAMAGKYKVYLVMGVIERDGY---TLYCTVLFF 144
Query: 107 DDAGNIRSTYRKI 119
D G+ +RKI
Sbjct: 145 DSQGHYLGKHRKI 157
>sp|Q93XI4|AGUB_ORYSJ N-carbamoylputrescine amidase OS=Oryza sativa subsp. japonica
GN=CPA PE=2 SV=1
Length = 301
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Query: 7 VRVAVAQMTSINDLAANFATCSRLVKEAASAGAKLLCFPENFS---YVGDKDADNIKIAE 63
V VA Q + + N T RL++EA GA ++ E F + + D + A+
Sbjct: 11 VSVAAVQFACTDVESENVDTAERLIREAHKKGANIVLVQELFEGQYFCQAQRLDFFQRAK 70
Query: 64 PLDG-PIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYRKIHL 121
P G P + + LA+E + + + F+E +++A N+ ++D G YRK H+
Sbjct: 71 PYKGNPTIIRFQKLAKELEVVIPVSFFEE--ANNAHY-NSVAIIDADGTDLGLYRKSHI 126
>sp|P32962|NRL2_ARATH Nitrilase 2 OS=Arabidopsis thaliana GN=NIT2 PE=1 SV=1
Length = 339
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 63/138 (45%), Gaps = 22/138 (15%)
Query: 1 MAGAHSVRVAVAQMTSI-NDLAANFATCSRLVKEAASAGAKLLCFPENF--SY------- 50
+A + VR + Q +++ ND A ++ + EAAS G++L+ FPE F Y
Sbjct: 12 VASSTIVRATIVQASTVYNDTPATLEKANKFIVEAASKGSELVVFPEAFIGGYPRGFRFG 71
Query: 51 --VG---DKDADNIKI----AEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCN 101
VG ++ D + A + GP ++ LA +++++L +G ++ G L
Sbjct: 72 LGVGVHNEEGRDEFRKYHASAIKVPGPEVEKLAELAGKNNVYLVMGAIEKDG---YTLYC 128
Query: 102 THVLLDDAGNIRSTYRKI 119
T + G +RK+
Sbjct: 129 TALFFSPQGQFLGKHRKL 146
>sp|P39874|YBEM_ECOLI Putative UPF0012 hydrolase YbeM OS=Escherichia coli (strain K12)
GN=ybeM PE=5 SV=3
Length = 262
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 52/116 (44%), Gaps = 8/116 (6%)
Query: 9 VAVAQMTSINDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDAD-NIKIAEPLDG 67
VA Q + N C+ L+ +AA A L PE D DAD ++K A+ L+G
Sbjct: 3 VAAGQFAVTSVWEKNAEICASLMAQAAENDASLFALPEALLARDDHDADLSVKSAQLLEG 62
Query: 68 PIMQGYCSLARES--SMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYRKIHL 121
+ L RES +M ++ S R N V L AGNI + Y K+HL
Sbjct: 63 EFL---GRLRRESKRNMMTTILTIHVP-STPGRAWNMLVAL-QAGNIVARYAKLHL 113
>sp|P49954|NIT3_YEAST Probable hydrolase NIT3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=NIT3 PE=1 SV=1
Length = 291
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 10/126 (7%)
Query: 4 AHSVRVAVAQMT-SINDLAANFATCSRLVKEA--ASAGAKLLCFPENFS--YVGD---KD 55
+ ++VA+ Q++ S D AN + ++ A KL+ PE F+ Y D K
Sbjct: 8 SQKIKVALVQLSGSSPDKMANLQRAATFIERAMKEQPDTKLVVLPECFNSPYSTDQFRKY 67
Query: 56 ADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRST 115
++ I EP +Q +LA + + L G E ++ NT ++ ++ G +
Sbjct: 68 SEVINPKEPSTS--VQFLSNLANKFKIILVGGTIPELDPKTDKIYNTSIIFNEDGKLIDK 125
Query: 116 YRKIHL 121
+RK+HL
Sbjct: 126 HRKVHL 131
>sp|P82605|NRL_BACSX Nitrilase OS=Bacillus sp. (strain OxB-1) GN=nit PE=1 SV=2
Length = 339
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MAGAHSVRVAVAQMTSIN-DLAANFATCSRLVKEAASAGAKLLCFPENF 48
M+ RVA Q + + DL A RLV EAA+ GAK++ FPE F
Sbjct: 1 MSNYPKYRVAAVQASPVLLDLDATIDKTCRLVDEAAANGAKVIAFPEAF 49
>sp|B9K1J4|AMIF_AGRVS Formamidase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846)
GN=amiF PE=3 SV=1
Length = 338
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 14/125 (11%)
Query: 5 HSVRVAVAQM-----TSINDLAANFATCSRLVKEAA--SAGAKLLCFPENFSYVGDKDAD 57
H V + + Q+ + DLA LV +A G L+ FPE ++ G
Sbjct: 12 HGVGIGLVQLQLPVTVTPQDLARQTQVIVDLVAKARRNQPGMDLVVFPE-YALHGLSMDI 70
Query: 58 NIKIAEPLDGPIMQGYCSLARESSMW--LSLGGFQEKGSDDARLCNTHVLLDDAGNIRST 115
N I +DGP + + + +++ +W S+ + G N+ +++DD G ++
Sbjct: 71 NPDIMCRMDGPEVAAFKAACKQNRIWGCFSIMEYNPGGMP----YNSGIIIDDTGALKLY 126
Query: 116 YRKIH 120
YRK+H
Sbjct: 127 YRKMH 131
>sp|P46011|NRL4_ARATH Bifunctional nitrilase/nitrile hydratase NIT4 OS=Arabidopsis
thaliana GN=NIT4 PE=1 SV=1
Length = 355
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 25/93 (26%)
Query: 7 VRVAVAQMTSI-NDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPL 65
VR V Q +++ D A RL+ EAA G++L+ FPE F
Sbjct: 36 VRATVVQASTVFYDTPATLDKAERLLSEAAENGSQLVVFPEAF----------------- 78
Query: 66 DGPIMQGYCSLARESSMWLSLGGFQEKGSDDAR 98
+ GY R S+ L++G KG DD R
Sbjct: 79 ----IGGY---PRGSTFELAIGSRTAKGRDDFR 104
>sp|P58054|YBEM_ECO57 UPF0012 hydrolase YbeM OS=Escherichia coli O157:H7 GN=ybeM PE=3
SV=1
Length = 262
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 51/116 (43%), Gaps = 8/116 (6%)
Query: 9 VAVAQMTSINDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDAD-NIKIAEPLDG 67
VA Q + N C+ L+ +AA L PE D DAD ++K A+ L+G
Sbjct: 3 VAAGQFAVTSVWEKNAEICASLMAQAAENDVSLFVLPEALLARDDHDADLSVKSAQLLEG 62
Query: 68 PIMQGYCSLARES--SMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYRKIHL 121
+ L RES +M ++ S R N V L AGNI + Y K+HL
Sbjct: 63 EFL---GRLRRESKRNMMTTILTIHVP-STPGRAWNMLVAL-QAGNIVARYAKLHL 113
>sp|Q89H51|AMIF_BRAJA Formamidase OS=Bradyrhizobium japonicum (strain USDA 110) GN=amiF
PE=3 SV=1
Length = 337
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 7 VRVAVAQMTSINDLAANFATCSRLVKEAAS--AGAKLLCFPENFSYVGDKDADNIKIAEP 64
V++ + + + DLA +V +A + L+ FPE +S G N +I
Sbjct: 19 VQLQLPNVVTRADLARQTERIVWMVGKARRNLSTMDLVVFPE-YSLHGLSMDTNPEIMCR 77
Query: 65 LDGPIMQGYCSLARESSMW--LSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYRKIH 120
LDGP + + ++ +W S+ F G+ N+ +++DD G I+ YRK+H
Sbjct: 78 LDGPEVTAFKKACVDNRIWGCFSIMEFNPHGNP----YNSGLIIDDHGEIKLYYRKLH 131
>sp|Q5Z1U0|AMIE_NOCFA Aliphatic amidase OS=Nocardia farcinica (strain IFM 10152) GN=amiE
PE=3 SV=1
Length = 345
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 12/125 (9%)
Query: 6 SVRVAVA--QMTSINDLAANFATCSRLVK-----EAASAGAKLLCFPENFSYVG--DKDA 56
+V VAV +M ++ A C R+ ++ G L+ FPE +S G +
Sbjct: 12 TVGVAVVNYKMPRLHTKAEVLDNCRRIADMLVGMKSGLPGMDLVVFPE-YSTQGIMYDEQ 70
Query: 57 DNIKIAEPLDGPIMQGYCSLARESSMW--LSLGGFQEKGSDDARLCNTHVLLDDAGNIRS 114
+ A + G + + RE+ +W S+ G Q + NT VL+DD G I
Sbjct: 71 EMYDTAATVPGEETAIFSAACREAGVWGVFSITGEQHEDHPRKPPYNTLVLIDDHGEIVQ 130
Query: 115 TYRKI 119
YRKI
Sbjct: 131 KYRKI 135
>sp|Q887D9|AMIF_PSESM Formamidase OS=Pseudomonas syringae pv. tomato (strain DC3000)
GN=amiF PE=3 SV=1
Length = 338
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 35 ASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQ-EKG 93
++ G L+ FPE +S G + +I LDGP + +E +W G F +
Sbjct: 50 SNPGMDLIVFPE-YSLHGLSMSTAPEIMCSLDGPEVVALREACKEHRIW---GCFSIMEA 105
Query: 94 SDDARLCNTHVLLDDAGNIRSTYRKIH 120
+ N+ +++DD G IR YRK+H
Sbjct: 106 NPQGNPFNSSLIVDDLGEIRLYYRKLH 132
>sp|O59829|YCU9_SCHPO Probable nitrilase C965.09 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=SPCC965.09 PE=4 SV=1
Length = 272
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 6/118 (5%)
Query: 9 VAVAQM-TSINDLAANFATCSRLVKEA--ASAGAKLLCFPENFSYVGDKDADNIKIAEPL 65
+A QM + D+ N S V E ++ L+ FPE + + +IAE
Sbjct: 5 IACVQMAPKVCDVKHNLQKMSSYVHEVMESNPSTNLILFPELITSGYECGNTFTQIAEIA 64
Query: 66 -DGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLC-NTHVLLDDAGNIRSTYRKIHL 121
+GP + +LA + + + + GF EK + + N+ + + + GN+ YRK+HL
Sbjct: 65 GEGPSFKTMSNLAAKYHVNI-IYGFPEKEEKQSNIIYNSCIYITENGNLGGVYRKVHL 121
>sp|B8GQ39|AMIE_THISH Aliphatic amidase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=amiE
PE=3 SV=1
Length = 347
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Query: 38 GAKLLCFPENFSYVGDKDADNI-KIAEPLDGPIMQGYCSLARESSMW--LSLGGFQEKGS 94
G L+ FPE ++ DA + A + G + + R + W SL G Q +
Sbjct: 51 GMDLVIFPEYSTHGIMYDAKEMYDTASTIPGDETEIFADACRRAKTWGVFSLTGEQHEDH 110
Query: 95 DDARLCNTHVLLDDAGNIRSTYRKI 119
+ NT +L++D G I YRKI
Sbjct: 111 PNKAPYNTLILMNDKGEIVQKYRKI 135
>sp|Q4ZXA2|AMIF_PSEU2 Formamidase OS=Pseudomonas syringae pv. syringae (strain B728a)
GN=amiF PE=3 SV=1
Length = 338
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 35 ASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQ-EKG 93
++ G L+ FPE +S G + +I LDGP + + +W G F +
Sbjct: 50 SNPGMDLIVFPE-YSLHGLSMSTAPEIMCSLDGPEVMALREACKTHRIW---GCFSIMEA 105
Query: 94 SDDARLCNTHVLLDDAGNIRSTYRKIH 120
+ N+ +++DD G IR YRK+H
Sbjct: 106 NPHGNPFNSGLIVDDLGEIRLYYRKLH 132
>sp|A5W2C0|AMIE_PSEP1 Aliphatic amidase OS=Pseudomonas putida (strain F1 / ATCC 700007)
GN=amiE PE=3 SV=1
Length = 347
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 38 GAKLLCFPE-NFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMW--LSLGGFQEKGS 94
G L+ FPE + + A+ ++ A + G + + R++++W SL G + +
Sbjct: 51 GMDLVIFPEYSLQGIMYDPAEMMETAVAIPGVETEVFAQACRKANVWGVFSLTGERHEEH 110
Query: 95 DDARLCNTHVLLDDAGNIRSTYRKI 119
NT VL+D+ G I YRKI
Sbjct: 111 PRKSPYNTLVLIDNNGEIVQKYRKI 135
>sp|P11436|AMIE_PSEAE Aliphatic amidase OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=amiE PE=1 SV=2
Length = 346
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 38 GAKLLCFPE-NFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMW--LSLGGFQEKGS 94
G L+ FPE + + A+ ++ A + G + + R++++W SL G + +
Sbjct: 51 GMDLVVFPEYSLQGIMYDPAEMMETAVAIPGEETEIFSRACRKANVWGVFSLTGERHEEH 110
Query: 95 DDARLCNTHVLLDDAGNIRSTYRKI 119
NT VL+D+ G I YRKI
Sbjct: 111 PRKAPYNTLVLIDNNGEIVQKYRKI 135
>sp|Q02QK0|AMIE_PSEAB Aliphatic amidase OS=Pseudomonas aeruginosa (strain UCBPP-PA14)
GN=amiE PE=3 SV=1
Length = 346
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 38 GAKLLCFPE-NFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMW--LSLGGFQEKGS 94
G L+ FPE + + A+ ++ A + G + + R++++W SL G + +
Sbjct: 51 GMDLVVFPEYSLQGIMYDPAEMMETAVAIPGEETEIFSRACRKANVWGVFSLTGERHEEH 110
Query: 95 DDARLCNTHVLLDDAGNIRSTYRKI 119
NT VL+D+ G I YRKI
Sbjct: 111 PRKAPYNTLVLIDNNGEIVQKYRKI 135
>sp|B7V2X1|AMIE_PSEA8 Aliphatic amidase OS=Pseudomonas aeruginosa (strain LESB58) GN=amiE
PE=3 SV=1
Length = 346
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 38 GAKLLCFPE-NFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMW--LSLGGFQEKGS 94
G L+ FPE + + A+ ++ A + G + + R++++W SL G + +
Sbjct: 51 GMDLVVFPEYSLQGIMYDPAEMMETAVAIPGEETEIFSRACRKANVWGVFSLTGERHEEH 110
Query: 95 DDARLCNTHVLLDDAGNIRSTYRKI 119
NT VL+D+ G I YRKI
Sbjct: 111 PRKAPYNTLVLIDNNGEIVQKYRKI 135
>sp|P55176|YPQQ_PSEFL UPF0012 hydrolase in pqqF 5'region OS=Pseudomonas fluorescens PE=3
SV=1
Length = 285
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 6/123 (4%)
Query: 1 MAGAHSVRVAVAQMTSIN-DLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNI 59
++G ++RVA+ Q D+A N ++ EA A LL PE F + + +
Sbjct: 16 VSGVKTMRVALYQCPPRPLDVAGNLQRLHQVAMEATDA--DLLVLPEMFLSGYNIGLEAV 73
Query: 60 -KIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYRK 118
+AE DGP Q + +++ L G+ E+ S D ++ N L+D G YRK
Sbjct: 74 GALAEAQDGPSAQR-IAAIAQAAGTAILYGYPER-SVDGQIYNAVQLIDAQGQRLCNYRK 131
Query: 119 IHL 121
HL
Sbjct: 132 THL 134
>sp|A6V262|AMIE_PSEA7 Aliphatic amidase OS=Pseudomonas aeruginosa (strain PA7) GN=amiE
PE=3 SV=1
Length = 346
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 38 GAKLLCFPE-NFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMW--LSLGGFQEKGS 94
G L+ FPE + + A+ ++ A + G + + R++++W SL G + +
Sbjct: 51 GMDLVVFPEYSLQGIMYDPAEMMETAVAIPGEETEIFSRACRKANVWGVFSLTGERHEEH 110
Query: 95 DDARLCNTHVLLDDAGNIRSTYRKI 119
NT VL+D+ G I YRKI
Sbjct: 111 PRKAPYNTLVLIDNNGEIVQKYRKI 135
>sp|C0ZNE8|AMIE_RHOE4 Aliphatic amidase OS=Rhodococcus erythropolis (strain PR4 / NBRC
100887) GN=amiE PE=3 SV=1
Length = 345
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 38 GAKLLCFPENFSYVG--DKDADNIKIAEPLDGPIMQGYCSLARESSMW--LSLGGFQEKG 93
G L+ FPE +S G + + A + G + + RE+ W S+ G Q +
Sbjct: 51 GMDLVVFPE-YSTQGIMYNEEEMYATAATIPGDETAIFSAACREADTWGIFSITGEQHED 109
Query: 94 SDDARLCNTHVLLDDAGNIRSTYRKI 119
+ NT +L+D+ G I YRKI
Sbjct: 110 HPNKPPYNTLILIDNKGEIVQKYRKI 135
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,736,670
Number of Sequences: 539616
Number of extensions: 1557266
Number of successful extensions: 3319
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 3268
Number of HSP's gapped (non-prelim): 63
length of query: 121
length of database: 191,569,459
effective HSP length: 88
effective length of query: 33
effective length of database: 144,083,251
effective search space: 4754747283
effective search space used: 4754747283
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)