Query 033342
Match_columns 121
No_of_seqs 145 out of 1178
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 21:16:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033342.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033342hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2w1v_A Nitrilase-2, nitrilase 100.0 6.6E-29 2.2E-33 169.9 15.1 114 5-121 2-115 (276)
2 3p8k_A Hydrolase, carbon-nitro 100.0 2.8E-29 9.6E-34 172.3 12.9 115 4-121 18-133 (281)
3 3hkx_A Amidase; alpha-beta-BET 100.0 1.1E-28 3.6E-33 169.6 11.1 115 4-121 18-134 (283)
4 1f89_A 32.5 kDa protein YLR351 100.0 1.1E-27 3.6E-32 164.9 14.5 116 5-121 9-131 (291)
5 3ivz_A Nitrilase; alpha-beta s 100.0 2.8E-27 9.5E-32 160.8 13.5 111 6-121 1-116 (262)
6 2e11_A Hydrolase; dimethylarse 99.9 2.5E-27 8.4E-32 161.3 12.9 110 5-121 2-112 (266)
7 1uf5_A N-carbamyl-D-amino acid 99.9 7.5E-26 2.6E-30 156.3 13.4 114 5-121 2-129 (303)
8 1ems_A Nitfhit, NIT-fragIle hi 99.9 2.1E-26 7.2E-31 166.3 10.3 116 4-121 12-130 (440)
9 2vhh_A CG3027-PA; hydrolase; 2 99.9 4.6E-25 1.6E-29 158.0 15.2 117 4-121 70-200 (405)
10 2dyu_A Formamidase; AMIF, CEK, 99.9 2.3E-25 7.8E-30 156.1 13.1 114 5-121 12-136 (334)
11 2uxy_A Aliphatic amidase; nitr 99.9 1.9E-25 6.6E-30 156.9 12.6 116 5-121 11-137 (341)
12 3ilv_A Glutamine-dependent NAD 99.9 2.8E-25 9.7E-30 166.4 11.0 114 1-121 1-116 (634)
13 3n05_A NH(3)-dependent NAD(+) 99.9 8.2E-24 2.8E-28 157.5 11.2 114 5-121 3-130 (590)
14 3sdb_A Glutamine-dependent NAD 99.9 4.6E-24 1.6E-28 160.8 9.7 112 5-121 11-125 (680)
15 4f4h_A Glutamine dependent NAD 99.9 4.8E-23 1.6E-27 152.6 11.6 115 4-121 4-136 (565)
16 3p8k_A Hydrolase, carbon-nitro 94.2 0.22 7.4E-06 33.6 7.1 71 31-115 175-245 (281)
17 1f89_A 32.5 kDa protein YLR351 93.3 0.18 6.3E-06 33.9 5.5 73 31-115 178-250 (291)
18 3hkx_A Amidase; alpha-beta-BET 93.1 0.42 1.4E-05 32.2 7.0 71 30-115 173-244 (283)
19 2w1v_A Nitrilase-2, nitrilase 92.6 0.27 9.1E-06 32.9 5.4 73 31-115 162-234 (276)
20 3ivz_A Nitrilase; alpha-beta s 92.1 0.43 1.5E-05 31.6 6.0 68 31-115 155-222 (262)
21 2uxy_A Aliphatic amidase; nitr 92.1 0.68 2.3E-05 32.1 7.1 72 30-115 174-245 (341)
22 2dyu_A Formamidase; AMIF, CEK, 91.8 0.85 2.9E-05 31.5 7.3 72 30-115 174-245 (334)
23 1ems_A Nitfhit, NIT-fragIle hi 91.6 0.59 2E-05 33.5 6.5 73 31-115 178-250 (440)
24 4f4h_A Glutamine dependent NAD 91.3 0.33 1.1E-05 36.2 5.1 74 30-115 177-250 (565)
25 3n05_A NH(3)-dependent NAD(+) 90.4 1 3.5E-05 33.7 7.0 72 31-115 173-245 (590)
26 1iuq_A Glycerol-3-phosphate ac 89.4 1.3 4.3E-05 31.4 6.3 63 19-83 204-267 (367)
27 2e11_A Hydrolase; dimethylarse 89.3 2.8 9.6E-05 27.6 7.9 64 38-115 165-229 (266)
28 3obe_A Sugar phosphate isomera 87.8 3 0.0001 28.2 7.4 73 7-86 90-168 (305)
29 1uf5_A N-carbamyl-D-amino acid 84.1 2 6.9E-05 28.9 5.0 43 72-115 218-260 (303)
30 4fva_A 5'-tyrosyl-DNA phosphod 83.7 1.2 4.2E-05 28.4 3.7 40 6-48 11-54 (256)
31 2vhh_A CG3027-PA; hydrolase; 2 82.8 2.4 8.2E-05 30.2 5.1 72 32-115 244-330 (405)
32 4f1h_A Tyrosyl-DNA phosphodies 80.2 1.4 4.8E-05 27.6 3.0 40 6-48 3-44 (250)
33 2j6v_A UV endonuclease, UVDE; 80.0 4.4 0.00015 27.6 5.5 81 5-87 21-122 (301)
34 1vyb_A ORF2 contains A reverse 79.1 4.1 0.00014 25.7 5.0 40 7-49 6-46 (238)
35 1j5p_A Aspartate dehydrogenase 78.8 3.5 0.00012 27.6 4.5 46 26-86 72-117 (253)
36 3teb_A Endonuclease/exonucleas 78.6 4.2 0.00014 26.2 4.9 41 6-49 3-45 (266)
37 1wdu_A TRAS1 ORF2P; four-layer 77.9 4 0.00014 26.3 4.6 39 7-49 18-56 (245)
38 2ei9_A Non-LTR retrotransposon 75.0 3.2 0.00011 27.1 3.5 40 9-52 8-47 (240)
39 1d2f_A MALY protein; aminotran 73.3 12 0.0004 25.6 6.3 39 38-86 162-200 (390)
40 1vli_A Spore coat polysacchari 73.2 12 0.00041 26.7 6.2 71 19-89 38-122 (385)
41 3fdb_A Beta C-S lyase, putativ 73.2 12 0.00041 25.3 6.3 43 34-86 146-188 (377)
42 3l23_A Sugar phosphate isomera 73.0 13 0.00043 25.0 6.3 57 20-83 103-159 (303)
43 1c7n_A Cystalysin; transferase 72.1 8.8 0.0003 26.4 5.4 40 37-86 163-202 (399)
44 3mpr_A Putative endonuclease/e 71.8 13 0.00046 24.6 6.1 21 28-48 33-53 (298)
45 4gew_A 5'-tyrosyl-DNA phosphod 71.3 4.6 0.00016 28.1 3.8 40 6-48 117-160 (362)
46 3ngf_A AP endonuclease, family 71.1 19 0.00063 23.5 8.8 62 20-86 88-149 (269)
47 4gz1_A Tyrosyl-DNA phosphodies 70.9 4.5 0.00015 25.6 3.5 41 5-48 8-50 (256)
48 3tif_A Uncharacterized ABC tra 70.7 4.3 0.00015 26.5 3.4 45 68-116 183-227 (235)
49 3cqj_A L-ribulose-5-phosphate 70.6 20 0.00068 23.6 7.2 60 21-85 104-164 (295)
50 3nra_A Aspartate aminotransfer 68.9 17 0.00058 24.9 6.3 40 37-86 178-217 (407)
51 3kax_A Aminotransferase, class 68.2 15 0.00051 24.9 5.9 41 36-86 154-194 (383)
52 3dx5_A Uncharacterized protein 67.7 23 0.00078 23.1 8.0 74 6-85 61-140 (286)
53 3ilv_A Glutamine-dependent NAD 65.8 8.1 0.00028 29.2 4.4 72 31-115 175-247 (634)
54 3dzz_A Putative pyridoxal 5'-p 65.5 15 0.00051 25.0 5.4 40 37-86 159-198 (391)
55 1g6h_A High-affinity branched- 64.1 16 0.00055 24.0 5.2 67 34-114 167-233 (257)
56 3tva_A Xylose isomerase domain 63.8 28 0.00095 22.8 6.9 61 20-86 97-157 (290)
57 1k77_A EC1530, hypothetical pr 63.4 26 0.0009 22.4 7.4 63 20-86 80-142 (260)
58 3kws_A Putative sugar isomeras 63.4 28 0.00097 22.7 6.6 62 21-86 100-164 (287)
59 3g12_A Putative lactoylglutath 63.1 17 0.00058 20.7 4.7 42 70-117 77-119 (128)
60 2x5d_A Probable aminotransfera 63.0 11 0.00038 26.1 4.5 41 36-86 170-210 (412)
61 4hf7_A Putative acylhydrolase; 62.9 17 0.00058 22.7 5.0 65 19-85 99-164 (209)
62 2o3h_A DNA-(apurinic or apyrim 62.1 12 0.0004 24.5 4.2 39 7-49 27-66 (285)
63 3op7_A Aminotransferase class 62.0 16 0.00055 24.8 5.1 21 66-86 172-192 (375)
64 3g0t_A Putative aminotransfera 61.8 28 0.00095 24.1 6.4 41 36-86 180-220 (437)
65 1i60_A IOLI protein; beta barr 61.8 29 0.001 22.3 6.5 75 7-85 60-140 (278)
66 4eo3_A Bacterioferritin comigr 61.5 7.4 0.00025 26.7 3.2 22 99-120 101-122 (322)
67 3ewb_X 2-isopropylmalate synth 61.5 20 0.00068 24.3 5.3 32 17-48 113-144 (293)
68 2zyj_A Alpha-aminodipate amino 61.3 12 0.00043 25.6 4.4 40 37-86 161-201 (397)
69 3g91_A MTH0212, exodeoxyribonu 61.1 15 0.0005 23.8 4.5 16 34-49 26-41 (265)
70 3gfo_A Cobalt import ATP-bindi 60.9 15 0.00053 24.5 4.7 66 36-114 159-224 (275)
71 1vp4_A Aminotransferase, putat 60.7 31 0.001 24.0 6.4 39 38-86 187-226 (425)
72 4e38_A Keto-hydroxyglutarate-a 60.1 13 0.00046 24.4 4.1 18 29-46 97-114 (232)
73 1hd7_A DNA-(apurinic or apyrim 60.0 13 0.00044 25.0 4.2 39 7-49 60-99 (318)
74 4g2e_A Peroxiredoxin; redox pr 59.7 19 0.00066 21.4 4.7 15 102-116 121-135 (157)
75 3nvt_A 3-deoxy-D-arabino-heptu 59.0 44 0.0015 23.7 6.9 59 23-88 154-213 (385)
76 4hde_A SCO1/SENC family lipopr 58.6 9.4 0.00032 23.3 3.1 18 101-118 135-152 (170)
77 3tui_C Methionine import ATP-b 58.4 4.8 0.00016 28.4 1.9 65 37-114 180-244 (366)
78 4a74_A DNA repair and recombin 58.2 27 0.00093 21.7 5.4 54 36-89 123-178 (231)
79 1iay_A ACC synthase 2, 1-amino 57.9 34 0.0012 23.7 6.3 53 24-86 172-226 (428)
80 3l8a_A METC, putative aminotra 57.7 24 0.00082 24.5 5.4 40 37-86 193-232 (421)
81 3rjt_A Lipolytic protein G-D-S 57.6 30 0.001 21.1 6.2 61 20-85 112-172 (216)
82 3cny_A Inositol catabolism pro 57.6 37 0.0013 22.2 6.8 67 20-86 85-159 (301)
83 3fsl_A Aromatic-amino-acid ami 57.1 39 0.0013 23.0 6.4 39 38-86 173-211 (397)
84 2yz2_A Putative ABC transporte 56.5 22 0.00076 23.5 4.9 67 34-114 152-218 (266)
85 4f4e_A Aromatic-amino-acid ami 56.5 35 0.0012 23.6 6.1 40 37-86 194-233 (420)
86 1ajs_A Aspartate aminotransfer 56.0 31 0.0011 23.7 5.7 39 38-86 183-221 (412)
87 2voa_A AF_EXO, XTHA, exodeoxyr 55.8 19 0.00066 22.8 4.4 22 25-49 17-38 (257)
88 1gd9_A Aspartate aminotransfer 55.7 20 0.0007 24.4 4.7 19 68-86 180-198 (389)
89 2jc4_A Exodeoxyribonuclease II 55.6 26 0.00089 22.1 5.0 20 30-49 18-37 (256)
90 3qc0_A Sugar isomerase; TIM ba 55.3 39 0.0013 21.7 5.9 63 20-86 78-141 (275)
91 3ftb_A Histidinol-phosphate am 55.0 24 0.00083 23.6 5.0 38 39-86 145-182 (361)
92 3cwc_A Putative glycerate kina 54.7 11 0.00037 26.9 3.1 43 37-90 286-330 (383)
93 2o0r_A RV0858C (N-succinyldiam 54.7 21 0.00073 24.6 4.7 19 68-86 180-198 (411)
94 1ivn_A Thioesterase I; hydrola 54.6 28 0.00097 21.0 4.9 69 8-85 64-137 (190)
95 2zc0_A Alanine glyoxylate tran 54.6 48 0.0017 22.6 6.6 53 24-86 158-213 (407)
96 1oxx_K GLCV, glucose, ABC tran 54.2 13 0.00044 26.0 3.5 66 36-114 156-221 (353)
97 3ey7_A Biphenyl-2,3-DIOL 1,2-d 54.0 26 0.0009 19.4 5.1 46 70-117 84-129 (133)
98 3lda_A DNA repair protein RAD5 53.7 44 0.0015 23.7 6.2 57 32-88 267-325 (400)
99 3g8r_A Probable spore coat pol 53.7 45 0.0015 23.4 6.1 67 23-89 19-99 (350)
100 1bw0_A TAT, protein (tyrosine 53.6 16 0.00054 25.2 3.9 21 66-86 195-215 (416)
101 3qfm_A SAPH, putative uncharac 53.6 12 0.0004 24.9 3.1 40 4-48 9-49 (270)
102 3piu_A 1-aminocyclopropane-1-c 53.4 43 0.0015 23.3 6.2 53 24-86 175-229 (435)
103 3ayv_A Putative uncharacterize 53.2 42 0.0014 21.4 5.7 64 20-85 71-134 (254)
104 2wqp_A Polysialic acid capsule 52.9 14 0.00049 25.9 3.5 68 20-88 30-111 (349)
105 3tue_A Tryparedoxin peroxidase 52.7 26 0.00089 22.8 4.6 22 95-116 142-163 (219)
106 2jc5_A Exodeoxyribonuclease; h 52.5 16 0.00056 23.2 3.6 17 33-49 23-39 (259)
107 3g6s_A Putative endonuclease/e 52.0 15 0.0005 23.7 3.4 24 23-49 26-49 (267)
108 3p94_A GDSL-like lipase; serin 51.7 38 0.0013 20.5 5.9 65 19-85 95-159 (204)
109 1lc5_A COBD, L-threonine-O-3-p 51.3 26 0.00088 23.7 4.6 40 37-86 145-184 (364)
110 3huh_A Virulence protein STM31 51.2 33 0.0011 19.8 4.9 45 70-116 97-141 (152)
111 1o4s_A Aspartate aminotransfer 51.1 19 0.00065 24.7 4.0 19 68-86 194-212 (389)
112 2hk0_A D-psicose 3-epimerase; 50.8 51 0.0018 21.8 7.4 65 20-86 102-169 (309)
113 3ff4_A Uncharacterized protein 50.5 23 0.00078 20.7 3.7 42 25-86 69-110 (122)
114 4dq6_A Putative pyridoxal phos 50.2 26 0.00088 23.8 4.5 19 68-86 184-202 (391)
115 3me7_A Putative uncharacterize 50.0 14 0.00048 22.3 2.9 18 101-118 128-145 (170)
116 3aow_A Putative uncharacterize 49.8 46 0.0016 23.5 5.9 39 38-86 216-255 (448)
117 3dwv_A Glutathione peroxidase- 49.7 7.7 0.00026 23.9 1.6 16 102-117 151-166 (187)
118 1u08_A Hypothetical aminotrans 49.3 23 0.00077 24.2 4.1 19 68-86 183-201 (386)
119 2gs3_A PHGPX, GPX-4, phospholi 49.3 42 0.0014 20.4 8.6 16 102-117 154-169 (185)
120 2ggt_A SCO1 protein homolog, m 49.3 14 0.00049 21.7 2.8 104 8-117 24-144 (164)
121 3d31_A Sulfate/molybdate ABC t 48.3 13 0.00046 25.8 2.8 44 68-114 165-208 (348)
122 2eja_A URO-D, UPD, uroporphyri 47.7 53 0.0018 22.4 5.8 50 30-84 184-234 (338)
123 3kol_A Oxidoreductase, glyoxal 47.7 38 0.0013 19.4 5.5 43 69-117 108-150 (156)
124 3rmj_A 2-isopropylmalate synth 47.4 29 0.001 24.4 4.4 32 18-49 121-152 (370)
125 1b5p_A Protein (aspartate amin 47.3 21 0.00071 24.4 3.7 19 68-86 184-202 (385)
126 2q7w_A Aspartate aminotransfer 47.1 62 0.0021 21.9 6.1 37 39-85 173-209 (396)
127 3dmy_A Protein FDRA; predicted 47.0 46 0.0016 24.4 5.5 46 25-87 47-92 (480)
128 7aat_A Aspartate aminotransfer 46.9 28 0.00096 23.8 4.3 40 37-86 174-213 (401)
129 2ihy_A ABC transporter, ATP-bi 46.8 40 0.0014 22.5 4.9 66 35-114 176-243 (279)
130 1yiz_A Kynurenine aminotransfe 46.5 31 0.0011 23.9 4.5 20 67-86 201-220 (429)
131 1xi9_A Putative transaminase; 46.4 24 0.00083 24.3 3.9 19 68-86 194-212 (406)
132 3meb_A Aspartate aminotransfer 46.3 68 0.0023 22.5 6.3 52 24-86 189-240 (448)
133 4g1u_C Hemin import ATP-bindin 46.3 12 0.0004 25.0 2.2 64 38-114 165-228 (266)
134 3m5v_A DHDPS, dihydrodipicolin 46.3 43 0.0015 22.6 5.0 20 23-42 88-107 (301)
135 1vr6_A Phospho-2-dehydro-3-deo 46.2 62 0.0021 22.7 5.9 56 22-87 117-176 (350)
136 2r91_A 2-keto-3-deoxy-(6-phosp 46.0 46 0.0016 22.3 5.1 52 23-86 75-127 (286)
137 1z47_A CYSA, putative ABC-tran 45.9 13 0.00044 26.1 2.4 65 37-114 162-226 (355)
138 3qze_A DHDPS, dihydrodipicolin 45.8 45 0.0015 22.8 5.1 20 23-42 103-122 (314)
139 4h41_A Putative alpha-L-fucosi 45.6 73 0.0025 22.2 6.2 60 29-89 58-121 (340)
140 2ehh_A DHDPS, dihydrodipicolin 45.4 45 0.0015 22.4 5.0 20 23-42 80-99 (294)
141 3u0h_A Xylose isomerase domain 45.2 59 0.002 20.9 5.8 62 20-86 79-140 (281)
142 1ako_A Exonuclease III; AP-end 45.1 23 0.0008 22.5 3.5 23 24-49 15-37 (268)
143 4evm_A Thioredoxin family prot 45.1 21 0.00071 19.8 3.0 18 100-117 105-122 (138)
144 3fkr_A L-2-keto-3-deoxyarabona 45.0 52 0.0018 22.4 5.3 20 23-42 88-107 (309)
145 1j32_A Aspartate aminotransfer 44.7 35 0.0012 23.2 4.5 19 68-86 183-201 (388)
146 3tcm_A Alanine aminotransferas 44.7 46 0.0016 23.9 5.3 54 23-86 220-275 (500)
147 2x5f_A Aspartate_tyrosine_phen 44.5 37 0.0013 23.5 4.7 39 38-86 189-232 (430)
148 1vs1_A 3-deoxy-7-phosphoheptul 44.5 46 0.0016 22.4 4.9 55 23-87 50-108 (276)
149 3flu_A DHDPS, dihydrodipicolin 44.5 49 0.0017 22.3 5.1 20 23-42 87-106 (297)
150 2pcj_A ABC transporter, lipopr 44.2 13 0.00046 23.8 2.2 42 68-114 178-219 (224)
151 3si9_A DHDPS, dihydrodipicolin 44.0 48 0.0017 22.6 5.0 20 23-42 102-121 (315)
152 3rlf_A Maltose/maltodextrin im 44.0 13 0.00043 26.4 2.1 65 37-114 150-214 (381)
153 3gkn_A Bacterioferritin comigr 44.0 19 0.00065 21.2 2.8 28 18-45 49-76 (163)
154 2vc6_A MOSA, dihydrodipicolina 44.0 49 0.0017 22.2 5.0 19 23-41 80-98 (292)
155 3vni_A Xylose isomerase domain 43.6 65 0.0022 20.9 6.8 64 21-85 84-149 (294)
156 3ixr_A Bacterioferritin comigr 43.5 19 0.00064 22.0 2.7 27 19-45 66-92 (179)
157 3if2_A Aminotransferase; YP_26 43.3 27 0.00094 24.3 3.8 41 36-86 204-244 (444)
158 2nuw_A 2-keto-3-deoxygluconate 43.2 49 0.0017 22.2 4.9 52 23-86 76-128 (288)
159 1xky_A Dihydrodipicolinate syn 43.2 43 0.0015 22.7 4.7 20 23-42 92-111 (301)
160 1xzo_A BSSCO, hypothetical pro 43.0 19 0.00063 21.4 2.6 18 100-117 136-153 (174)
161 3ezs_A Aminotransferase ASPB; 43.0 21 0.00071 24.2 3.1 19 68-86 174-192 (376)
162 3lmz_A Putative sugar isomeras 42.9 64 0.0022 20.6 5.8 56 7-85 75-130 (257)
163 2yv1_A Succinyl-COA ligase [AD 42.7 75 0.0026 21.4 6.1 46 25-87 81-127 (294)
164 3fvs_A Kynurenine--oxoglutarat 42.6 24 0.00083 24.3 3.5 19 68-86 194-212 (422)
165 1lt8_A Betaine-homocysteine me 42.5 47 0.0016 23.7 4.9 29 20-49 134-162 (406)
166 3hp4_A GDSL-esterase; psychrot 42.3 53 0.0018 19.5 6.9 58 19-85 84-141 (185)
167 3zw5_A Glyoxalase domain-conta 42.3 48 0.0017 19.1 5.1 45 69-115 100-144 (147)
168 3drn_A Peroxiredoxin, bacterio 42.3 22 0.00076 21.0 2.9 18 100-117 111-128 (161)
169 2csu_A 457AA long hypothetical 42.2 88 0.003 22.5 6.4 53 24-87 74-127 (457)
170 2rli_A SCO2 protein homolog, m 42.2 23 0.00077 21.0 2.9 103 8-117 27-147 (171)
171 3nav_A Tryptophan synthase alp 42.1 53 0.0018 22.0 4.9 20 28-47 115-134 (271)
172 3cpr_A Dihydrodipicolinate syn 42.0 54 0.0018 22.2 5.0 50 23-85 96-146 (304)
173 3b46_A Aminotransferase BNA3; 42.0 27 0.00094 24.5 3.7 19 68-86 221-239 (447)
174 4gqc_A Thiol peroxidase, perox 41.9 21 0.00071 21.5 2.7 15 102-116 123-137 (164)
175 3na8_A Putative dihydrodipicol 41.9 45 0.0015 22.8 4.6 21 23-43 104-124 (315)
176 1g29_1 MALK, maltose transport 41.9 17 0.00058 25.6 2.5 66 36-114 155-220 (372)
177 3qxb_A Putative xylose isomera 41.8 17 0.00058 24.3 2.5 65 21-85 110-176 (316)
178 2olj_A Amino acid ABC transpor 41.7 16 0.00055 24.2 2.3 64 37-114 176-239 (263)
179 3kij_A Probable glutathione pe 41.5 18 0.00062 21.9 2.4 15 103-117 139-153 (180)
180 3dyd_A Tyrosine aminotransfera 41.3 19 0.00065 25.2 2.8 21 66-86 209-229 (427)
181 1v2d_A Glutamine aminotransfer 41.3 30 0.001 23.5 3.7 19 68-86 172-190 (381)
182 2yxg_A DHDPS, dihydrodipicolin 41.2 44 0.0015 22.4 4.5 20 23-42 80-99 (289)
183 4ffc_A 4-aminobutyrate aminotr 41.1 92 0.0031 22.0 6.6 58 21-86 207-264 (453)
184 3d0c_A Dihydrodipicolinate syn 41.1 46 0.0016 22.7 4.6 50 23-85 91-141 (314)
185 3eb2_A Putative dihydrodipicol 41.1 43 0.0015 22.7 4.4 19 23-41 84-102 (300)
186 3ele_A Amino transferase; RER0 41.0 41 0.0014 22.9 4.4 19 68-86 192-216 (398)
187 3o63_A Probable thiamine-phosp 41.0 39 0.0013 22.2 4.1 53 27-87 45-102 (243)
188 2inf_A URO-D, UPD, uroporphyri 40.9 86 0.0029 21.6 6.1 47 31-82 199-245 (359)
189 2it1_A 362AA long hypothetical 40.9 16 0.00054 25.7 2.2 44 68-114 171-214 (362)
190 3vnd_A TSA, tryptophan synthas 40.8 53 0.0018 21.9 4.7 21 28-48 113-133 (267)
191 1q98_A Thiol peroxidase, TPX; 40.6 22 0.00076 21.2 2.7 18 99-116 129-146 (165)
192 2fyw_A Conserved hypothetical 40.6 78 0.0027 21.0 6.7 53 28-88 49-101 (267)
193 3daq_A DHDPS, dihydrodipicolin 40.4 41 0.0014 22.6 4.2 19 23-41 82-100 (292)
194 1psq_A Probable thiol peroxida 40.4 23 0.0008 21.0 2.8 17 100-116 126-142 (163)
195 2pk8_A Uncharacterized protein 40.2 40 0.0014 19.0 3.3 28 18-45 13-42 (103)
196 2yyz_A Sugar ABC transporter, 40.1 17 0.0006 25.4 2.4 67 35-114 148-214 (359)
197 4hs4_A Chromate reductase; tri 40.1 19 0.00065 22.7 2.4 17 1-17 1-17 (199)
198 2i3y_A Epididymal secretory gl 40.0 19 0.00065 23.1 2.4 16 102-117 179-194 (215)
199 2v1m_A Glutathione peroxidase; 39.9 20 0.00068 21.1 2.4 16 102-117 135-150 (169)
200 3tak_A DHDPS, dihydrodipicolin 39.8 49 0.0017 22.2 4.5 50 23-85 81-131 (291)
201 3fvq_A Fe(3+) IONS import ATP- 39.7 21 0.00071 25.0 2.7 66 36-114 154-219 (359)
202 2vup_A Glutathione peroxidase- 39.7 63 0.0021 19.6 7.9 16 102-117 153-168 (190)
203 2yzh_A Probable thiol peroxida 39.5 24 0.00081 21.1 2.7 18 100-117 133-150 (171)
204 2j63_A AP-endonuclease; base e 39.5 24 0.00081 25.6 3.1 20 27-49 171-190 (467)
205 2jsy_A Probable thiol peroxida 39.3 25 0.00084 20.9 2.8 17 100-116 128-144 (167)
206 2p5q_A Glutathione peroxidase 39.3 21 0.00071 21.1 2.4 16 102-117 136-151 (170)
207 2qw5_A Xylose isomerase-like T 39.3 80 0.0027 21.2 5.6 26 20-45 104-129 (335)
208 2r37_A Glutathione peroxidase 39.1 20 0.00069 22.7 2.4 16 102-117 161-176 (207)
209 2o14_A Hypothetical protein YX 39.0 96 0.0033 21.5 8.1 75 8-85 232-313 (375)
210 4h08_A Putative hydrolase; GDS 38.9 33 0.0011 20.9 3.4 18 68-85 140-157 (200)
211 1rtt_A Conserved hypothetical 38.9 23 0.00079 21.8 2.6 39 1-41 1-39 (193)
212 3b4u_A Dihydrodipicolinate syn 38.8 63 0.0022 21.7 5.0 25 23-47 83-108 (294)
213 1k7c_A Rhamnogalacturonan acet 38.7 74 0.0025 20.1 7.5 59 19-85 109-167 (233)
214 2r2n_A Kynurenine/alpha-aminoa 38.6 96 0.0033 21.4 6.5 39 38-86 190-229 (425)
215 3l1w_A Uncharacterized protein 38.6 40 0.0014 21.4 3.8 25 22-49 22-46 (257)
216 4eu1_A Mitochondrial aspartate 38.3 94 0.0032 21.3 6.5 39 38-86 183-221 (409)
217 3rri_A Glyoxalase/bleomycin re 38.3 53 0.0018 18.3 6.6 48 68-116 79-126 (135)
218 1xvw_A Hypothetical protein RV 38.2 28 0.00096 20.3 2.9 16 102-117 124-139 (160)
219 1gp8_A Protein (scaffolding pr 38.2 33 0.0011 15.9 2.9 19 20-38 6-24 (40)
220 3fw2_A Thiol-disulfide oxidore 38.1 23 0.00079 20.5 2.4 17 100-116 117-133 (150)
221 3p7x_A Probable thiol peroxida 37.8 27 0.00092 20.8 2.8 17 100-116 129-145 (166)
222 3oks_A 4-aminobutyrate transam 37.6 1.1E+02 0.0036 21.6 6.5 22 65-86 245-266 (451)
223 2v9d_A YAGE; dihydrodipicolini 37.5 45 0.0015 23.1 4.1 20 23-42 111-130 (343)
224 3lab_A Putative KDPG (2-keto-3 37.4 35 0.0012 22.2 3.3 16 31-46 78-93 (217)
225 3lor_A Thiol-disulfide isomera 37.2 30 0.001 20.1 2.9 18 100-117 121-138 (160)
226 3erw_A Sporulation thiol-disul 37.1 32 0.0011 19.4 3.0 19 99-117 114-132 (145)
227 3e2y_A Kynurenine-oxoglutarate 36.9 34 0.0012 23.4 3.5 19 68-86 187-205 (410)
228 1f6k_A N-acetylneuraminate lya 36.9 50 0.0017 22.2 4.2 20 23-42 84-103 (293)
229 3cmi_A Peroxiredoxin HYR1; thi 36.8 23 0.00079 21.1 2.3 16 102-117 136-151 (171)
230 2rfg_A Dihydrodipicolinate syn 36.7 46 0.0016 22.5 4.0 20 23-42 80-99 (297)
231 3s5o_A 4-hydroxy-2-oxoglutarat 36.6 69 0.0024 21.7 4.9 22 23-44 94-115 (307)
232 1jfu_A Thiol:disulfide interch 36.6 30 0.001 20.8 2.9 18 100-117 144-161 (186)
233 1yx1_A Hypothetical protein PA 36.5 45 0.0015 21.5 3.9 21 25-45 84-104 (264)
234 1zco_A 2-dehydro-3-deoxyphosph 36.3 93 0.0032 20.6 7.0 54 24-87 36-93 (262)
235 3sk2_A EHPR; antibiotic resist 36.3 58 0.002 18.2 6.4 44 68-117 84-130 (132)
236 2f8a_A Glutathione peroxidase 36.3 24 0.00081 22.3 2.4 37 9-45 49-87 (208)
237 1n8j_A AHPC, alkyl hydroperoxi 36.3 28 0.00096 21.3 2.7 17 100-116 118-134 (186)
238 1whi_A Ribosomal protein L14; 36.2 14 0.00048 21.8 1.2 16 100-115 81-96 (122)
239 3r6a_A Uncharacterized protein 35.9 65 0.0022 18.7 6.0 41 70-116 76-116 (144)
240 2q02_A Putative cytoplasmic pr 35.9 85 0.0029 20.0 7.5 71 7-86 65-138 (272)
241 1mv5_A LMRA, multidrug resista 35.9 60 0.0021 21.0 4.4 65 33-113 152-216 (243)
242 3f9t_A TDC, L-tyrosine decarbo 35.7 95 0.0033 20.8 5.6 17 70-86 190-206 (397)
243 4hc5_A Glyoxalase/bleomycin re 35.7 56 0.0019 17.9 5.7 43 70-117 90-132 (133)
244 2obi_A PHGPX, GPX-4, phospholi 35.6 25 0.00086 21.3 2.4 16 102-117 152-167 (183)
245 2r8w_A AGR_C_1641P; APC7498, d 35.6 49 0.0017 22.8 4.0 20 23-42 114-133 (332)
246 2dou_A Probable N-succinyldiam 35.4 22 0.00075 24.1 2.3 19 68-86 178-196 (376)
247 2yrr_A Aminotransferase, class 35.1 60 0.0021 21.4 4.4 17 70-86 143-159 (353)
248 1o5k_A DHDPS, dihydrodipicolin 35.0 45 0.0015 22.6 3.7 20 23-42 92-111 (306)
249 3jtx_A Aminotransferase; NP_28 34.9 26 0.00091 23.8 2.6 19 68-86 188-206 (396)
250 1xvq_A Thiol peroxidase; thior 34.9 31 0.001 20.8 2.7 16 101-116 130-145 (175)
251 2wkj_A N-acetylneuraminate lya 34.8 58 0.002 22.1 4.2 20 23-42 91-110 (303)
252 1t3i_A Probable cysteine desul 34.8 56 0.0019 22.2 4.3 17 70-86 188-204 (420)
253 1v43_A Sugar-binding transport 34.7 17 0.00057 25.6 1.6 44 68-114 179-222 (372)
254 1w3i_A EDA, 2-keto-3-deoxy glu 34.6 56 0.0019 22.0 4.2 52 23-86 76-128 (293)
255 3l21_A DHDPS, dihydrodipicolin 34.6 43 0.0015 22.7 3.6 20 23-42 95-114 (304)
256 3dz1_A Dihydrodipicolinate syn 34.5 56 0.0019 22.2 4.2 22 23-44 87-108 (313)
257 3eyt_A Uncharacterized protein 34.5 31 0.0011 20.0 2.6 17 101-117 119-135 (158)
258 3u0o_A Selenide, water dikinas 34.5 68 0.0023 22.1 4.6 33 68-103 120-152 (347)
259 3eur_A Uncharacterized protein 34.4 34 0.0012 19.5 2.8 18 99-116 113-130 (142)
260 2p31_A CL683, glutathione pero 34.4 27 0.00093 21.2 2.4 16 102-117 149-164 (181)
261 3rq1_A Aminotransferase class 34.4 72 0.0025 21.9 4.8 53 24-86 164-224 (418)
262 3bzy_B ESCU; auto cleavage pro 34.3 33 0.0011 18.7 2.5 23 65-87 24-46 (83)
263 3hdc_A Thioredoxin family prot 34.2 36 0.0012 19.9 2.9 18 100-117 116-133 (158)
264 4fo5_A Thioredoxin-like protei 34.2 25 0.00084 20.2 2.1 16 100-115 114-129 (143)
265 1vpl_A ABC transporter, ATP-bi 34.1 40 0.0014 22.2 3.3 64 37-114 163-226 (256)
266 2b7k_A SCO1 protein; metalloch 34.1 27 0.00093 21.7 2.4 43 71-117 115-162 (200)
267 1vq8_K 50S ribosomal protein L 34.1 16 0.00054 21.9 1.2 15 101-115 93-107 (132)
268 3hcz_A Possible thiol-disulfid 33.8 31 0.001 19.6 2.5 17 100-116 112-128 (148)
269 2yv2_A Succinyl-COA synthetase 33.7 96 0.0033 20.9 5.2 45 26-87 83-128 (297)
270 3euc_A Histidinol-phosphate am 33.6 64 0.0022 21.6 4.4 39 38-86 157-197 (367)
271 3lvm_A Cysteine desulfurase; s 33.6 59 0.002 22.3 4.3 17 70-86 182-198 (423)
272 2g2c_A Putative molybdenum cof 33.6 31 0.0011 21.1 2.6 26 24-49 55-80 (167)
273 2lrn_A Thiol:disulfide interch 33.2 28 0.00097 20.1 2.3 17 100-116 110-126 (152)
274 3v2d_O 50S ribosomal protein L 33.1 17 0.00058 21.5 1.2 15 101-115 82-96 (122)
275 2onk_A Molybdate/tungstate ABC 33.0 11 0.00038 24.6 0.4 44 68-114 164-207 (240)
276 3raz_A Thioredoxin-related pro 32.9 26 0.00089 20.3 2.1 17 101-117 107-123 (151)
277 4g6x_A Glyoxalase/bleomycin re 32.8 74 0.0025 18.4 5.5 41 70-116 109-149 (155)
278 1vhc_A Putative KHG/KDPG aldol 32.7 57 0.0019 21.1 3.8 18 29-46 80-97 (224)
279 3ndn_A O-succinylhomoserine su 32.7 1.3E+02 0.0043 21.1 5.9 17 70-86 185-201 (414)
280 4a1f_A DNAB helicase, replicat 32.5 23 0.00078 24.6 2.0 63 24-89 140-204 (338)
281 3kcm_A Thioredoxin family prot 32.4 40 0.0014 19.4 2.9 17 100-116 107-123 (154)
282 3ia1_A THIO-disulfide isomeras 32.2 36 0.0012 19.6 2.6 18 100-117 110-127 (154)
283 3gl3_A Putative thiol:disulfid 32.2 41 0.0014 19.3 2.9 18 100-117 106-123 (152)
284 1r3s_A URO-D, uroporphyrinogen 32.1 1.2E+02 0.0043 20.8 5.8 45 29-78 201-245 (367)
285 2lrt_A Uncharacterized protein 32.1 21 0.00073 20.9 1.6 17 100-116 114-130 (152)
286 2o1b_A Aminotransferase, class 32.1 20 0.00068 24.8 1.6 19 68-86 201-219 (404)
287 3ble_A Citramalate synthase fr 32.0 45 0.0016 23.0 3.4 30 18-47 130-159 (337)
288 2yyb_A Hypothetical protein TT 32.0 1.1E+02 0.0037 20.0 6.5 51 28-88 47-97 (242)
289 2ay1_A Aroat, aromatic amino a 31.9 1.2E+02 0.004 20.5 6.3 37 39-85 170-206 (394)
290 1geq_A Tryptophan synthase alp 31.7 1E+02 0.0035 19.7 5.3 18 28-45 98-115 (248)
291 2w0m_A SSO2452; RECA, SSPF, un 31.7 87 0.003 19.2 4.6 45 36-88 119-165 (235)
292 1fc4_A 2-amino-3-ketobutyrate 31.5 1.2E+02 0.0042 20.5 5.6 17 70-86 196-212 (401)
293 1we0_A Alkyl hydroperoxide red 31.5 37 0.0013 20.6 2.7 19 99-117 118-136 (187)
294 3or5_A Thiol:disulfide interch 31.4 39 0.0013 19.6 2.7 18 99-116 116-133 (165)
295 2b5x_A YKUV protein, TRXY; thi 31.4 44 0.0015 18.8 2.9 18 99-116 110-127 (148)
296 3bdk_A D-mannonate dehydratase 31.3 1.4E+02 0.0047 21.1 6.8 39 7-45 78-124 (386)
297 2r6a_A DNAB helicase, replicat 31.3 1E+02 0.0034 22.0 5.2 62 25-88 299-361 (454)
298 1svv_A Threonine aldolase; str 31.2 99 0.0034 20.4 5.0 19 68-86 164-182 (359)
299 2l5o_A Putative thioredoxin; s 31.2 30 0.001 19.9 2.2 18 100-117 107-124 (153)
300 3fkf_A Thiol-disulfide oxidore 31.2 35 0.0012 19.3 2.4 18 99-116 114-131 (148)
301 1oi7_A Succinyl-COA synthetase 31.1 1.2E+02 0.0041 20.3 6.2 46 25-87 75-121 (288)
302 3kh7_A Thiol:disulfide interch 31.1 43 0.0015 20.1 2.9 17 100-116 133-149 (176)
303 3bbo_M Ribosomal protein L14; 31.1 15 0.0005 21.7 0.7 15 101-115 82-96 (121)
304 3ktw_A SRP19, signal recogniti 30.9 26 0.00088 20.3 1.7 47 37-85 15-61 (109)
305 3dc7_A Putative uncharacterize 30.8 98 0.0033 19.2 6.2 62 21-85 113-178 (232)
306 1xcc_A 1-Cys peroxiredoxin; un 30.8 38 0.0013 21.6 2.7 17 100-116 128-144 (220)
307 2e7j_A SEP-tRNA:Cys-tRNA synth 30.8 1.1E+02 0.0038 20.3 5.2 37 37-86 146-182 (371)
308 1kmj_A Selenocysteine lyase; p 30.8 52 0.0018 22.3 3.6 17 70-86 183-199 (406)
309 2ixe_A Antigen peptide transpo 30.7 19 0.00066 23.9 1.3 67 34-114 170-236 (271)
310 2pn8_A Peroxiredoxin-4; thiore 30.5 45 0.0015 21.0 3.0 19 98-116 137-155 (211)
311 3h5d_A DHDPS, dihydrodipicolin 30.5 89 0.003 21.2 4.6 18 23-40 87-105 (311)
312 2a40_B Deoxyribonuclease-1; WA 30.5 60 0.0021 20.8 3.7 23 26-49 20-42 (260)
313 2f9s_A Thiol-disulfide oxidore 30.4 40 0.0014 19.3 2.6 18 100-117 104-121 (151)
314 2qul_A D-tagatose 3-epimerase; 30.3 1.1E+02 0.0038 19.7 5.6 26 20-45 83-108 (290)
315 3mad_A Sphingosine-1-phosphate 30.3 80 0.0028 22.6 4.6 18 70-87 258-275 (514)
316 3hdp_A Glyoxalase-I; glutathio 30.3 73 0.0025 17.6 4.2 45 70-117 88-132 (133)
317 3lwa_A Secreted thiol-disulfid 30.3 42 0.0014 20.2 2.8 18 100-117 147-164 (183)
318 3igs_A N-acetylmannosamine-6-p 30.1 1.1E+02 0.0039 19.7 5.1 18 30-47 93-110 (232)
319 3hno_A Pyrophosphate-dependent 30.0 49 0.0017 23.8 3.4 13 37-49 210-222 (419)
320 1b0u_A Histidine permease; ABC 30.0 41 0.0014 22.2 2.8 65 36-114 169-233 (262)
321 3q58_A N-acetylmannosamine-6-p 30.0 1.1E+02 0.0039 19.7 5.1 18 30-47 93-110 (229)
322 1prx_A HORF6; peroxiredoxin, h 29.9 40 0.0014 21.6 2.7 17 100-116 131-147 (224)
323 2ojp_A DHDPS, dihydrodipicolin 29.8 47 0.0016 22.3 3.1 19 23-41 81-99 (292)
324 3k28_A Glutamate-1-semialdehyd 29.7 1.3E+02 0.0046 20.7 5.6 21 66-86 219-239 (429)
325 3g7q_A Valine-pyruvate aminotr 29.6 61 0.0021 22.1 3.8 20 67-86 199-218 (417)
326 3zrd_A Thiol peroxidase; oxido 29.6 42 0.0014 20.9 2.7 17 100-116 165-181 (200)
327 2cvh_A DNA repair and recombin 29.5 55 0.0019 20.1 3.3 46 38-87 105-152 (220)
328 3rhe_A NAD-dependent benzaldeh 29.3 87 0.003 18.1 5.5 43 68-116 79-121 (148)
329 2yyd_A Selenide, water dikinas 29.3 1.2E+02 0.0042 20.8 5.2 24 68-91 121-144 (345)
330 2v2g_A Peroxiredoxin 6; oxidor 29.2 42 0.0014 21.7 2.7 17 100-116 127-143 (233)
331 2h30_A Thioredoxin, peptide me 29.2 49 0.0017 19.2 2.9 17 100-116 122-138 (164)
332 2h01_A 2-Cys peroxiredoxin; th 29.1 43 0.0015 20.4 2.7 18 99-116 120-137 (192)
333 3fq8_A Glutamate-1-semialdehyd 29.0 1.1E+02 0.0038 21.1 5.1 21 66-86 218-238 (427)
334 3ihj_A Alanine aminotransferas 28.9 1.1E+02 0.0038 22.0 5.1 54 23-86 219-273 (498)
335 1kng_A Thiol:disulfide interch 28.9 50 0.0017 18.9 2.9 17 100-116 118-134 (156)
336 3tsm_A IGPS, indole-3-glycerol 28.8 1.3E+02 0.0045 20.1 5.4 39 31-85 135-173 (272)
337 3tha_A Tryptophan synthase alp 28.8 97 0.0033 20.6 4.5 40 27-84 105-144 (252)
338 3ct8_A Protein BH2160, putativ 28.7 77 0.0026 18.2 3.7 46 69-116 99-144 (146)
339 3qja_A IGPS, indole-3-glycerol 28.7 1.3E+02 0.0043 20.1 5.1 19 30-48 127-145 (272)
340 2gek_A Phosphatidylinositol ma 28.6 62 0.0021 21.9 3.7 41 4-44 18-58 (406)
341 2lbw_A H/ACA ribonucleoprotein 28.6 89 0.003 18.0 6.1 34 36-85 34-67 (121)
342 2zod_A Selenide, water dikinas 28.5 1.3E+02 0.0044 20.6 5.2 24 68-91 121-144 (345)
343 2c0d_A Thioredoxin peroxidase 28.5 51 0.0017 21.0 3.0 19 98-116 144-162 (221)
344 3t18_A Aminotransferase class 28.5 1.1E+02 0.0038 20.9 5.0 53 24-86 163-223 (413)
345 1to6_A Glycerate kinase; glyce 28.4 25 0.00085 24.9 1.6 43 36-90 276-320 (371)
346 3j21_J 50S ribosomal protein L 28.4 20 0.0007 21.7 1.0 15 101-115 102-116 (141)
347 2ftp_A Hydroxymethylglutaryl-C 28.3 1.2E+02 0.0042 20.3 5.0 25 18-42 117-141 (302)
348 1xla_A D-xylose isomerase; iso 28.3 87 0.003 21.8 4.4 24 21-44 112-135 (394)
349 3eeg_A 2-isopropylmalate synth 28.3 22 0.00075 24.5 1.3 30 19-48 116-145 (325)
350 2hmc_A AGR_L_411P, dihydrodipi 28.2 80 0.0027 21.9 4.1 25 23-47 103-128 (344)
351 2dkj_A Serine hydroxymethyltra 28.1 1.2E+02 0.0042 20.5 5.1 34 38-86 163-196 (407)
352 2bmx_A Alkyl hydroperoxidase C 28.0 46 0.0016 20.4 2.7 18 99-116 131-148 (195)
353 2gb3_A Aspartate aminotransfer 27.9 39 0.0013 23.3 2.5 19 68-86 194-212 (409)
354 3u5e_V L17A, YL32, 60S ribosom 27.8 20 0.0007 21.6 0.9 15 101-115 98-112 (137)
355 1ji0_A ABC transporter; ATP bi 27.8 39 0.0013 21.9 2.4 65 36-114 155-219 (240)
356 2zds_A Putative DNA-binding pr 27.5 1.4E+02 0.0047 19.8 5.2 25 21-45 107-131 (340)
357 2ctz_A O-acetyl-L-homoserine s 27.5 1E+02 0.0035 21.5 4.7 17 70-86 163-179 (421)
358 2q6t_A DNAB replication FORK h 27.5 1.3E+02 0.0044 21.3 5.2 63 25-88 296-360 (444)
359 1zxx_A 6-phosphofructokinase; 27.4 40 0.0014 23.3 2.4 13 36-48 183-195 (319)
360 1zzo_A RV1677; thioredoxin fol 27.4 54 0.0019 18.0 2.8 17 100-117 102-118 (136)
361 2ztj_A Homocitrate synthase; ( 27.4 1.5E+02 0.005 20.8 5.4 33 17-49 106-140 (382)
362 1yaa_A Aspartate aminotransfer 27.2 1.5E+02 0.0051 20.2 5.9 36 41-86 179-214 (412)
363 1wjo_A T-plastin; CH domain, a 27.2 38 0.0013 19.9 2.0 31 19-49 66-96 (124)
364 1pfk_A Phosphofructokinase; tr 27.2 40 0.0014 23.3 2.4 13 36-48 184-196 (320)
365 2kjz_A ATC0852; protein of unk 27.1 94 0.0032 17.8 4.2 43 69-117 99-141 (144)
366 2gx8_A NIF3-related protein; s 27.1 1.7E+02 0.0059 20.8 6.1 53 27-87 74-126 (397)
367 2bwn_A 5-aminolevulinate synth 27.1 1.5E+02 0.0051 20.1 6.0 37 37-86 177-213 (401)
368 3tqx_A 2-amino-3-ketobutyrate 26.9 1.1E+02 0.0039 20.5 4.8 36 38-86 175-210 (399)
369 3k1t_A Glutamate--cysteine lig 26.9 1.8E+02 0.0062 21.0 6.6 74 5-90 53-135 (432)
370 1x52_A Pelota homolog, CGI-17; 26.9 85 0.0029 18.3 3.5 26 24-49 73-98 (124)
371 2xzm_U Ribosomal protein L7AE 26.9 1E+02 0.0034 18.0 5.9 34 36-85 38-71 (126)
372 3pzy_A MOG; ssgcid, seattle st 26.9 67 0.0023 19.6 3.2 25 25-49 53-77 (164)
373 1cs1_A CGS, protein (cystathio 26.7 1.5E+02 0.0052 20.1 6.7 17 70-86 156-172 (386)
374 3qyy_A Response regulator; C-D 26.7 1E+02 0.0034 18.0 5.8 39 6-44 127-165 (167)
375 1wbh_A KHG/KDPG aldolase; lyas 26.5 67 0.0023 20.5 3.3 18 29-46 79-96 (214)
376 3hn9_A Lamin-B1; structural ge 26.3 64 0.0022 18.9 2.9 16 102-117 101-116 (123)
377 3zrp_A Serine-pyruvate aminotr 26.3 58 0.002 21.8 3.1 17 70-86 146-162 (384)
378 1uul_A Tryparedoxin peroxidase 26.3 52 0.0018 20.3 2.7 18 99-116 126-143 (202)
379 2b1k_A Thiol:disulfide interch 26.1 58 0.002 19.0 2.9 17 100-116 126-142 (168)
380 3e96_A Dihydrodipicolinate syn 26.1 95 0.0033 21.1 4.2 22 23-44 91-112 (316)
381 3d6k_A Putative aminotransfera 26.1 63 0.0021 22.4 3.4 39 38-86 178-218 (422)
382 3qhx_A Cystathionine gamma-syn 26.1 1.1E+02 0.0039 21.0 4.7 18 70-87 170-187 (392)
383 3ojc_A Putative aspartate/glut 26.1 84 0.0029 20.2 3.8 32 18-49 56-87 (231)
384 3ck2_A Conserved uncharacteriz 26.0 49 0.0017 20.0 2.5 36 3-44 3-38 (176)
385 3qfe_A Putative dihydrodipicol 25.9 81 0.0028 21.5 3.8 19 23-41 91-109 (318)
386 3h14_A Aminotransferase, class 25.9 1.3E+02 0.0045 20.3 4.9 19 68-86 181-199 (391)
387 1lu4_A Soluble secreted antige 25.8 54 0.0018 18.1 2.6 18 99-117 99-116 (136)
388 4gym_A Glyoxalase/bleomycin re 25.7 99 0.0034 17.6 6.0 42 68-115 89-130 (149)
389 2a4x_A Mitomycin-binding prote 25.7 95 0.0032 17.4 6.2 44 69-117 84-127 (138)
390 2v5d_A O-GLCNACASE NAGJ; famil 25.6 2E+02 0.0067 22.3 6.1 26 24-49 206-233 (737)
391 2i7r_A Conserved domain protei 25.5 87 0.003 16.9 4.4 42 70-116 74-115 (118)
392 2yw3_A 4-hydroxy-2-oxoglutarat 25.5 86 0.0029 19.8 3.7 19 29-47 74-92 (207)
393 2qma_A Diaminobutyrate-pyruvat 25.3 1.6E+02 0.0055 21.0 5.4 17 70-86 277-293 (497)
394 2nq2_C Hypothetical ABC transp 25.3 1.1E+02 0.0037 20.0 4.2 65 34-111 142-206 (253)
395 3qpm_A Peroxiredoxin; oxidored 25.2 54 0.0018 21.2 2.7 18 99-116 167-184 (240)
396 2i81_A 2-Cys peroxiredoxin; st 25.0 56 0.0019 20.6 2.7 18 99-116 141-158 (213)
397 4atq_A 4-aminobutyrate transam 25.0 62 0.0021 23.3 3.2 22 65-86 244-265 (456)
398 3uh9_A Metallothiol transferas 24.9 92 0.0032 17.6 3.6 43 69-116 75-117 (145)
399 2ju5_A Thioredoxin disulfide i 24.9 63 0.0021 18.9 2.8 17 100-116 117-133 (154)
400 1mkz_A Molybdenum cofactor bio 24.9 53 0.0018 20.2 2.5 27 23-49 53-80 (172)
401 2rbb_A Glyoxalase/bleomycin re 24.8 1E+02 0.0034 17.4 6.6 43 69-116 88-130 (141)
402 3sbc_A Peroxiredoxin TSA1; alp 24.8 80 0.0027 20.4 3.4 31 74-113 126-156 (216)
403 3b1d_A Betac-S lyase; HET: PLP 30.6 16 0.00053 25.1 0.0 16 37-52 163-178 (392)
404 3ruy_A Ornithine aminotransfer 24.7 1.4E+02 0.0049 20.1 5.0 21 66-86 201-221 (392)
405 4a3s_A 6-phosphofructokinase; 24.7 82 0.0028 21.6 3.6 14 36-49 183-196 (319)
406 1jmv_A USPA, universal stress 24.6 60 0.0021 18.3 2.7 18 30-47 94-111 (141)
407 2lja_A Putative thiol-disulfid 24.5 40 0.0014 19.3 1.8 17 100-116 109-125 (152)
408 3ei9_A LL-diaminopimelate amin 24.3 1.4E+02 0.0047 20.6 4.8 19 68-86 218-236 (432)
409 3rfq_A Pterin-4-alpha-carbinol 24.3 54 0.0019 20.6 2.5 26 24-49 75-100 (185)
410 2z61_A Probable aspartate amin 24.3 91 0.0031 20.9 3.9 14 73-86 175-188 (370)
411 2z08_A Universal stress protei 24.3 62 0.0021 18.2 2.7 19 30-48 91-109 (137)
412 1muw_A Xylose isomerase; atomi 24.3 1E+02 0.0035 21.3 4.2 25 20-44 111-135 (386)
413 2pcq_A Putative dihydrodipicol 24.3 1.1E+02 0.0039 20.3 4.2 24 23-46 73-97 (283)
414 2pjk_A 178AA long hypothetical 24.2 49 0.0017 20.5 2.3 26 24-49 66-92 (178)
415 3ke3_A Putative serine-pyruvat 24.2 1.2E+02 0.0041 20.6 4.4 19 68-86 155-173 (379)
416 2ale_A SNU13, NHP2/L7AE family 24.1 1.1E+02 0.0038 18.1 3.7 20 69-88 63-83 (134)
417 3mfq_A TROA, high-affinity zin 23.8 1.4E+02 0.0049 19.8 4.7 47 23-86 197-243 (282)
418 4a29_A Engineered retro-aldol 23.7 81 0.0028 21.1 3.3 19 30-48 118-136 (258)
419 3a5f_A Dihydrodipicolinate syn 23.7 45 0.0015 22.4 2.2 20 23-42 81-100 (291)
420 2yxo_A Histidinol phosphatase; 23.7 1.5E+02 0.0051 19.0 6.5 59 26-88 17-79 (267)
421 3ceu_A Thiamine phosphate pyro 23.7 47 0.0016 21.0 2.2 20 29-48 17-36 (210)
422 3nmy_A Xometc, cystathionine g 23.7 1.5E+02 0.0051 20.6 4.9 17 70-86 171-187 (400)
423 3out_A Glutamate racemase; str 23.7 1.3E+02 0.0044 20.0 4.3 28 18-45 49-76 (268)
424 2vt1_B Surface presentation of 23.7 44 0.0015 18.6 1.8 22 66-87 25-46 (93)
425 2iuy_A Avigt4, glycosyltransfe 23.7 96 0.0033 20.5 3.8 40 5-44 2-53 (342)
426 1zye_A Thioredoxin-dependent p 23.5 61 0.0021 20.4 2.7 18 99-116 146-163 (220)
427 2okj_A Glutamate decarboxylase 23.5 2E+02 0.007 20.4 6.4 50 24-86 229-280 (504)
428 3pj0_A LMO0305 protein; struct 23.5 1E+02 0.0035 20.4 4.0 19 68-86 158-176 (359)
429 4e77_A Glutamate-1-semialdehyd 23.3 1.5E+02 0.005 20.5 4.8 22 65-86 218-239 (429)
430 1qmv_A Human thioredoxin perox 23.3 74 0.0025 19.4 3.0 19 98-116 123-141 (197)
431 3ztl_A Thioredoxin peroxidase; 23.2 72 0.0024 20.1 3.0 19 99-117 159-177 (222)
432 2d2e_A SUFC protein; ABC-ATPas 23.2 59 0.002 21.1 2.6 13 101-114 212-224 (250)
433 3vp6_A Glutamate decarboxylase 23.1 2.1E+02 0.0073 20.6 6.2 17 70-86 267-283 (511)
434 2kuc_A Putative disulphide-iso 23.1 78 0.0027 17.5 2.9 17 100-116 87-103 (130)
435 3hgm_A Universal stress protei 23.0 72 0.0025 18.0 2.8 20 29-48 101-120 (147)
436 2vi8_A Serine hydroxymethyltra 23.0 1.7E+02 0.006 19.7 5.1 17 70-86 180-196 (405)
437 3vax_A Putative uncharacterize 22.9 62 0.0021 21.9 2.8 17 70-86 178-194 (400)
438 1j93_A UROD, uroporphyrinogen 22.9 1.8E+02 0.0063 19.7 5.8 43 32-79 200-242 (353)
439 1mxs_A KDPG aldolase; 2-keto-3 22.9 72 0.0025 20.6 3.0 18 29-46 89-106 (225)
440 1ydn_A Hydroxymethylglutaryl-C 22.9 1.7E+02 0.0059 19.4 5.2 25 18-42 113-137 (295)
441 1uuy_A CNX1, molybdopterin bio 22.9 62 0.0021 19.7 2.5 26 24-49 56-82 (167)
442 4e3q_A Pyruvate transaminase; 22.8 65 0.0022 23.3 2.9 22 65-86 254-275 (473)
443 3e9k_A Kynureninase; kynurenin 22.8 1.6E+02 0.0055 20.6 5.0 17 70-86 233-249 (465)
444 4gi5_A Quinone reductase; prot 22.8 1.7E+02 0.0059 19.6 4.9 39 4-43 20-58 (280)
445 3nl6_A Thiamine biosynthetic b 22.8 1.3E+02 0.0044 22.4 4.5 51 26-88 26-76 (540)
446 3exm_A Phosphatase SC4828; nuc 22.8 64 0.0022 21.3 2.6 23 95-117 111-133 (237)
447 1zof_A Alkyl hydroperoxide-red 22.8 54 0.0019 20.0 2.3 18 99-116 122-139 (198)
448 2is8_A Molybdopterin biosynthe 22.8 62 0.0021 19.6 2.5 27 23-49 46-73 (164)
449 4h51_A Aspartate aminotransfer 22.7 1.7E+02 0.006 20.6 5.1 52 24-86 177-228 (420)
450 2v2f_A Penicillin binding prot 22.7 45 0.0015 13.4 1.3 15 101-115 5-19 (26)
451 3ly1_A Putative histidinol-pho 22.7 1.3E+02 0.0044 19.9 4.3 16 37-52 140-155 (354)
452 3c48_A Predicted glycosyltrans 22.7 1.2E+02 0.004 20.8 4.2 41 4-44 18-65 (438)
453 3grc_A Sensor protein, kinase; 22.5 1.1E+02 0.0037 16.9 3.6 15 1-15 1-15 (140)
454 3jyf_A 2',3'-cyclic nucleotide 22.5 85 0.0029 21.6 3.4 39 6-44 156-207 (339)
455 2nyd_A UPF0135 protein SA1388; 22.4 2.1E+02 0.0071 20.1 6.0 53 27-88 50-102 (370)
456 3sig_A PArg, poly(ADP-ribose) 22.4 1.3E+02 0.0044 20.3 4.2 28 21-48 194-221 (277)
457 2rfv_A Methionine gamma-lyase; 22.2 1.5E+02 0.0051 20.2 4.7 17 70-86 168-184 (398)
458 1wza_A Alpha-amylase A; hydrol 22.2 1.5E+02 0.0053 21.1 4.8 68 22-89 24-103 (488)
459 4hvk_A Probable cysteine desul 22.2 80 0.0027 21.0 3.2 16 70-86 157-172 (382)
460 3gve_A YFKN protein; alpha-bet 22.2 87 0.003 21.6 3.4 39 6-44 162-213 (341)
461 3isl_A Purine catabolism prote 22.1 1.1E+02 0.0036 20.8 3.9 17 70-86 155-171 (416)
462 1eye_A DHPS 1, dihydropteroate 22.1 74 0.0025 21.4 3.0 45 1-45 1-49 (280)
463 3tjj_A Peroxiredoxin-4; thiore 22.1 67 0.0023 21.0 2.7 18 99-116 181-198 (254)
464 3i41_A Beta-hemolysin; beta to 22.0 51 0.0017 22.1 2.2 14 36-49 63-76 (317)
465 3ewl_A Uncharacterized conserv 22.0 64 0.0022 18.1 2.4 15 100-114 110-124 (142)
466 1ass_A Thermosome; chaperonin, 21.9 1.4E+02 0.0048 18.0 5.4 77 6-87 21-120 (159)
467 4ao9_A Beta-phenylalanine amin 21.8 56 0.0019 23.6 2.4 21 66-86 239-259 (454)
468 3i5t_A Aminotransferase; pyrid 21.8 80 0.0027 22.5 3.2 22 65-86 239-260 (476)
469 2ghi_A Transport protein; mult 21.7 95 0.0033 20.3 3.4 65 34-114 169-233 (260)
470 3kgw_A Alanine-glyoxylate amin 21.7 69 0.0024 21.5 2.8 17 70-86 167-183 (393)
471 3gju_A Putative aminotransfera 21.6 81 0.0028 22.2 3.2 21 66-86 240-260 (460)
472 1kvn_A SRP19; RNA binding prot 21.6 1.2E+02 0.0042 17.2 3.5 46 40-86 3-50 (104)
473 3t7y_A YOP proteins translocat 21.6 45 0.0016 18.7 1.5 49 38-86 8-60 (97)
474 3keb_A Probable thiol peroxida 21.5 74 0.0025 20.6 2.8 17 100-116 137-153 (224)
475 1tz9_A Mannonate dehydratase; 21.5 2E+02 0.0069 19.6 5.5 26 19-44 89-114 (367)
476 1m32_A 2-aminoethylphosphonate 21.5 1.4E+02 0.005 19.6 4.4 17 70-86 150-166 (366)
477 3bh0_A DNAB-like replicative h 21.4 1.9E+02 0.0065 19.3 6.0 60 24-88 164-228 (315)
478 3n5m_A Adenosylmethionine-8-am 21.4 75 0.0026 22.2 3.0 21 66-86 234-254 (452)
479 3tnj_A Universal stress protei 21.4 77 0.0026 18.1 2.7 18 30-47 101-118 (150)
480 3dod_A Adenosylmethionine-8-am 21.4 83 0.0028 22.0 3.2 21 66-86 230-250 (448)
481 4a6r_A Omega transaminase; tra 21.4 83 0.0028 22.1 3.2 21 66-86 238-258 (459)
482 3ghj_A Putative integron gene 21.3 1.2E+02 0.0042 17.1 4.3 43 69-116 97-139 (141)
483 3l44_A Glutamate-1-semialdehyd 21.3 2.1E+02 0.0071 19.7 5.6 21 66-86 221-241 (434)
484 3cyv_A URO-D, UPD, uroporphyri 21.3 1.3E+02 0.0043 20.6 4.1 21 29-49 191-211 (354)
485 2q0q_A ARYL esterase; SGNH hyd 21.2 1.5E+02 0.005 17.9 4.5 76 8-85 85-180 (216)
486 3inn_A Pantothenate synthetase 21.2 17 0.00059 25.1 -0.3 32 17-48 86-117 (314)
487 3uhf_A Glutamate racemase; str 21.2 1.1E+02 0.0038 20.5 3.7 31 18-48 66-96 (274)
488 2l57_A Uncharacterized protein 21.1 93 0.0032 17.1 3.0 17 100-116 83-99 (126)
489 2gzm_A Glutamate racemase; enz 21.1 1.4E+02 0.0048 19.6 4.1 32 18-49 45-76 (267)
490 3fdx_A Putative filament prote 21.1 80 0.0027 17.8 2.7 18 30-47 98-115 (143)
491 2bkw_A Alanine-glyoxylate amin 21.0 1.5E+02 0.0051 19.8 4.4 17 70-86 156-174 (385)
492 1v77_A PH1877P, hypothetical p 21.0 61 0.0021 20.6 2.3 19 72-90 151-169 (212)
493 3a2b_A Serine palmitoyltransfe 21.0 2E+02 0.0068 19.4 6.0 17 70-86 192-208 (398)
494 3asa_A LL-diaminopimelate amin 21.0 2E+02 0.0067 19.6 5.1 19 68-86 183-201 (400)
495 4bby_A Alkyldihydroxyacetoneph 21.0 1E+02 0.0034 23.4 3.7 17 69-85 217-233 (658)
496 2cb1_A O-acetyl homoserine sul 20.9 1.6E+02 0.0056 20.2 4.7 17 70-86 159-175 (412)
497 3hmu_A Aminotransferase, class 20.8 86 0.0029 22.4 3.2 21 66-86 242-262 (472)
498 1mjh_A Protein (ATP-binding do 20.8 78 0.0027 18.4 2.7 17 32-48 114-130 (162)
499 3p6l_A Sugar phosphate isomera 20.7 1.7E+02 0.0059 18.5 5.5 56 7-85 77-132 (262)
500 1eg5_A Aminotransferase; PLP-d 20.6 1.3E+02 0.0046 19.9 4.1 17 70-86 158-176 (384)
No 1
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=99.96 E-value=6.6e-29 Score=169.91 Aligned_cols=114 Identities=31% Similarity=0.422 Sum_probs=102.6
Q ss_pred cccEEEEEEeccccCHHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEE
Q 033342 5 HSVRVAVAQMTSINDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWL 84 (121)
Q Consensus 5 ~~~~ia~vQ~~~~~~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i 84 (121)
.++|||++|+++.+|.+.|++++.+++++|++.++|||||||+++ +||...+...+++..+++..+.++++|++++++|
T Consensus 2 ~~~~va~vQ~~~~~d~~~n~~~~~~~i~~a~~~gadlvv~PE~~~-~gy~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i 80 (276)
T 2w1v_A 2 STFRLALIQLQVSSIKSDNLTRACSLVREAAKQGANIVSLPECFN-SPYGTTYFPDYAEKIPGESTQKLSEVAKESSIYL 80 (276)
T ss_dssp CEEEEEEEECCCCSCHHHHHHHHHHHHHHHHHTTCSEEECCTTTT-SCCSTTTHHHHCBCSSSHHHHHHHHHHHHHTSEE
T ss_pred CccEEEEEeccccCCHHHHHHHHHHHHHHHHHCCCCEEEcCCCcc-cCCCHHHHHHHhccCCCHHHHHHHHHHHHcCeEE
Confidence 469999999998899999999999999999999999999999999 8887766655666667899999999999999999
Q ss_pred EeccceeecCCCCceEEEEEEECCCCCEEeeeecCCC
Q 033342 85 SLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYRKIHL 121 (121)
Q Consensus 85 i~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~~y~K~hL 121 (121)
++|++.++ .++++||++++++|+|++++.|+|+||
T Consensus 81 v~G~~~~~--~~~~~yNs~~~i~~~G~i~~~y~K~hL 115 (276)
T 2w1v_A 81 IGGSIPEE--DAGKLYNTCSVFGPDGSLLVKHRKIHL 115 (276)
T ss_dssp ECCCEEEE--ETTEEEEEEEEECTTSCEEEEEECSSC
T ss_pred Eecceeec--CCCcEEEEEEEECCCCcEEEEEecccc
Confidence 99977664 367899999999999999999999997
No 2
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=99.96 E-value=2.8e-29 Score=172.31 Aligned_cols=115 Identities=17% Similarity=0.253 Sum_probs=104.1
Q ss_pred CcccEEEEEEeccc-cCHHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCc
Q 033342 4 AHSVRVAVAQMTSI-NDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSM 82 (121)
Q Consensus 4 ~~~~~ia~vQ~~~~-~~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~ 82 (121)
..+||||++|+++. +|.+.|++++.+++++|++.++|||||||+++ +||...++...++..+++..+.++++|+++++
T Consensus 18 ~~~~kva~~Q~~~~~~d~~~Nl~~~~~~i~~A~~~gadlvvfPE~~l-~gy~~~~~~~~a~~~~~~~~~~l~~la~~~~i 96 (281)
T 3p8k_A 18 GSHMKVQIYQLPIVFGDSSKNETQITQWFEKNMNAEVDVVVLPEMWN-NGYDLEHLNEKADNNLGQSFSFIKHLAEKYKV 96 (281)
T ss_dssp TSEEEEEEEECCCCTTCHHHHHHHHHHHHHHHCCTTCCEEECCSSTT-TTTCGGGHHHHSEETTHHHHHHHHHHHHHHTC
T ss_pred CCCcEEEEEeccCCcCCHHHHHHHHHHHHHHHHhCCCcEEEcCCCcc-CCCChhHHHHhhhccCcHHHHHHHHHHhhCCe
Confidence 46799999999986 89999999999999999999999999999999 89988776666766778899999999999999
Q ss_pred EEEeccceeecCCCCceEEEEEEECCCCCEEeeeecCCC
Q 033342 83 WLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYRKIHL 121 (121)
Q Consensus 83 ~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~~y~K~hL 121 (121)
+|++|+..+. .++++||++++|+|+|++++.|+|+||
T Consensus 97 ~iv~G~~~~~--~~~~~yNs~~~i~~~G~i~~~y~K~hL 133 (281)
T 3p8k_A 97 DIVAGSVSNI--RNNQIFNTAFSVNKSGQLINEYDKVHL 133 (281)
T ss_dssp EEEEEEEEEE--ETTEEEEEEEEECTTSCEEEEEECSCC
T ss_pred EEEEeeeEEc--cCCcEEEEEEEEcCCCeEEEEEeeEEC
Confidence 9999976553 567899999999999999999999997
No 3
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=99.96 E-value=1.1e-28 Score=169.59 Aligned_cols=115 Identities=22% Similarity=0.252 Sum_probs=99.7
Q ss_pred CcccEEEEEEeccc-cCHHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhh-hcccCCCChHHHHHHHHHHHcC
Q 033342 4 AHSVRVAVAQMTSI-NDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNI-KIAEPLDGPIMQGYCSLARESS 81 (121)
Q Consensus 4 ~~~~~ia~vQ~~~~-~~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~a~~~~ 81 (121)
+.+||||++|+++. +|++.|++++.+++++|++.++|||||||+++ +||...++. .++++..++..+.++++|++++
T Consensus 18 ~~~~rva~~Q~~~~~~d~~~N~~~~~~~i~~A~~~gadlvvfPE~~l-~gy~~~d~~~~~a~~~~~~~~~~l~~~a~~~~ 96 (283)
T 3hkx_A 18 GSHMRIALMQHTARPLDPQHNLDLIDDAAARASEQGAQLLLTPELFG-FGYVPSQICAQVSAEQVDAARSRLRGIARDRG 96 (283)
T ss_dssp TEEEEEEEEEBCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTGG-GCSCHHHHHHHCCHHHHHHHHHHHHHHHHHTT
T ss_pred CCccEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCCCcc-cCCChHHHHHHhccccCCHHHHHHHHHHHHhC
Confidence 45799999999986 69999999999999999999999999999999 898876533 4444445688999999999999
Q ss_pred cEEEeccceeecCCCCceEEEEEEECCCCCEEeeeecCCC
Q 033342 82 MWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYRKIHL 121 (121)
Q Consensus 82 ~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~~y~K~hL 121 (121)
++|++|+..+. .++++||++++|+|+|++++.|+|+||
T Consensus 97 i~iv~G~~~~~--~~~~~yNs~~~i~~~G~i~~~y~K~hL 134 (283)
T 3hkx_A 97 IALVWSLPGPE--GPEQRGITAELADEHGEVLASYQKVQL 134 (283)
T ss_dssp SEEEECCBCSS--CTTTCCBEEEEECTTSCEEEEEECSSC
T ss_pred CEEEEEEEEEc--CCCCEEEEEEEEcCCCcEEEEEccccC
Confidence 99999975441 347899999999999999999999997
No 4
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=99.96 E-value=1.1e-27 Score=164.92 Aligned_cols=116 Identities=24% Similarity=0.381 Sum_probs=99.9
Q ss_pred cccEEEEEEec-cccCHHHHHHHHHHHHHHH--HHCCCcEEEccCCccCCCCCCchhhhcccCC--C--ChHHHHHHHHH
Q 033342 5 HSVRVAVAQMT-SINDLAANFATCSRLVKEA--ASAGAKLLCFPENFSYVGDKDADNIKIAEPL--D--GPIMQGYCSLA 77 (121)
Q Consensus 5 ~~~~ia~vQ~~-~~~~~~~n~~~~~~~~~~a--~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~--~--~~~~~~l~~~a 77 (121)
.++|||++|++ ..+|.+.|++++.+++++| ++.++|||||||+++ +||...+...+++.. + ++..+.++++|
T Consensus 9 ~~~~va~vQ~~~~~~d~~~n~~~~~~~i~~a~~~~~gadlvv~PE~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~a 87 (291)
T 1f89_A 9 QKIKVALVQLSGSSPDKMANLQRAATFIERAMKEQPDTKLVVLPECFN-SPYSTDQFRKYSEVINPKEPSTSVQFLSNLA 87 (291)
T ss_dssp SCEEEEEEECCCCCSCHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTT-SCSCHHHHHHHTTBCCSSSCCHHHHHHHHHH
T ss_pred ccceEEEEeccCCcCCHHHHHHHHHHHHHHHhhccCCCeEEEcCCCcc-cCCChHHHHHHhhhhccCCCChHHHHHHHHH
Confidence 45999999999 5699999999999999999 889999999999999 888766555555544 3 78999999999
Q ss_pred HHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEeeeecCCC
Q 033342 78 RESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYRKIHL 121 (121)
Q Consensus 78 ~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~~y~K~hL 121 (121)
++++++|++|+++++...++++||++++++|+|++++.|+|+||
T Consensus 88 ~~~~~~iv~G~~~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL 131 (291)
T 1f89_A 88 NKFKIILVGGTIPELDPKTDKIYNTSIIFNEDGKLIDKHRKVHL 131 (291)
T ss_dssp HHSSCEEECCCEEEECTTTCCEEEEEEEECTTSCEEEEEECCCC
T ss_pred HHcCcEEEeceeecccCCCCceEEEEEEECCCCcEEeEEeeecc
Confidence 99999999997665421137899999999999999999999997
No 5
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=99.95 E-value=2.8e-27 Score=160.84 Aligned_cols=111 Identities=32% Similarity=0.505 Sum_probs=96.7
Q ss_pred ccEEEEEEeccc-cCHHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCch---hhhcccC-CCChHHHHHHHHHHHc
Q 033342 6 SVRVAVAQMTSI-NDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDAD---NIKIAEP-LDGPIMQGYCSLARES 80 (121)
Q Consensus 6 ~~~ia~vQ~~~~-~~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~---~~~~~~~-~~~~~~~~l~~~a~~~ 80 (121)
+||||++|+++. +|.+.|++++.+++++|++.++|||||||+++ +||...+ ...+++. .+++..+.++++|+++
T Consensus 1 M~rva~~Q~~~~~~d~~~N~~~~~~~i~~A~~~gadlvvfPE~~~-~gy~~~~~~~~~~~a~~~~~~~~~~~l~~~a~~~ 79 (262)
T 3ivz_A 1 MVKVAYVQMNPQILEPDKNYSKAEKLIKEASKQGAQLVVLPELFD-TGYNFETREEVFEIAQKIPEGETTTFLMDVARDT 79 (262)
T ss_dssp -CEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTT-TCSCCSCHHHHHHHCBCTTTSHHHHHHHHHHHHH
T ss_pred CeEEEEEeccCCCCCHHHHHHHHHHHHHHHHHCCCCEEEeCCCcc-cCCCCCCHHHHHHhcCccCCCHHHHHHHHHHHHc
Confidence 389999999986 99999999999999999999999999999999 8887543 3344553 4678999999999999
Q ss_pred CcEEEeccceeecCCCCceEEEEEEECCCCCEEeeeecCCC
Q 033342 81 SMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYRKIHL 121 (121)
Q Consensus 81 ~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~~y~K~hL 121 (121)
+++|++|. +++ .++++||++++++|+| +++.|+|+||
T Consensus 80 ~~~iv~G~-~~~--~~~~~yNs~~~i~~~G-~~~~y~K~hL 116 (262)
T 3ivz_A 80 GVYIVAGT-AEK--DGDVLYNSAVVVGPRG-FIGKYRKIHL 116 (262)
T ss_dssp CCEEEEEE-EEE--ETTEEEEEEEEEETTE-EEEEEECSSC
T ss_pred CcEEEEeE-EEe--eCCcEEEEEEEEcCCe-eEEEEeeccc
Confidence 99999994 443 5678999999999999 9999999997
No 6
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=99.95 E-value=2.5e-27 Score=161.31 Aligned_cols=110 Identities=23% Similarity=0.313 Sum_probs=96.7
Q ss_pred cccEEEEEEeccc-cCHHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcE
Q 033342 5 HSVRVAVAQMTSI-NDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMW 83 (121)
Q Consensus 5 ~~~~ia~vQ~~~~-~~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ 83 (121)
+++|||++|+++. +|.+.|++++.+++++| +.++|||||||+++ +||... ....++...++..+.++++|++++++
T Consensus 2 ~~~kva~~Q~~~~~~d~~~n~~~~~~~i~~a-~~gadlvv~PE~~~-~gy~~~-~~~~a~~~~~~~~~~l~~~a~~~~~~ 78 (266)
T 2e11_A 2 HDLRISLVQGSTRWHDPAGNRDYYGALLEPL-AGQSDLVILPETFT-SGFSNE-AIDKAEDMDGPTVAWIRTQAARLGAA 78 (266)
T ss_dssp CCEEEEEEECCCCTTCHHHHHHHHHHHHGGG-TTTCSEEECCTTTT-TCSCSG-GGGGCEETTSHHHHHHHHHHHHHTSE
T ss_pred CccEEEEEeCCCCcCCHHHHHHHHHHHHHHh-cCCCCEEECCCCcc-ccCChh-HHHhhccCCCHHHHHHHHHHHHhCCE
Confidence 4699999999986 89999999999999999 88999999999999 788543 23455556788999999999999999
Q ss_pred EEeccceeecCCCCceEEEEEEECCCCCEEeeeecCCC
Q 033342 84 LSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYRKIHL 121 (121)
Q Consensus 84 ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~~y~K~hL 121 (121)
|++|+..+ .++++||++++++|+|+++ .|+|+||
T Consensus 79 iv~G~~~~---~~~~~yNs~~~i~~~G~i~-~y~K~hL 112 (266)
T 2e11_A 79 ITGSVQLR---TEHGVFNRLLWATPDGALQ-YYDKRHL 112 (266)
T ss_dssp EEEEEEEE---ETTEEEEEEEEECTTSCEE-EEECSSC
T ss_pred EEEeeeEc---cCCcEEEEEEEECCCCCEE-EEeeecc
Confidence 99997665 4678999999999999999 9999997
No 7
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=99.94 E-value=7.5e-26 Score=156.35 Aligned_cols=114 Identities=28% Similarity=0.337 Sum_probs=94.2
Q ss_pred cccEEEEEEeccc---cCHHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchh-------hhccc-CCCChHHHHH
Q 033342 5 HSVRVAVAQMTSI---NDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADN-------IKIAE-PLDGPIMQGY 73 (121)
Q Consensus 5 ~~~~ia~vQ~~~~---~~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~-------~~~~~-~~~~~~~~~l 73 (121)
+++|||++|+++. +|.+.|++++.+++++|++.++|||||||+++ +||...++ ..+.+ ...++.++.+
T Consensus 2 ~~~~va~~Q~~~~~~~~d~~~n~~~~~~~i~~a~~~gadlvv~PE~~~-~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (303)
T 1uf5_A 2 RQMILAVGQQGPIARAETREQVVVRLLDMLTKAASRGANFIVFPELAL-TTFFPRWHFTDEAELDSFYETEMPGPVVRPL 80 (303)
T ss_dssp CEEEEEEEEBCCCCTTCCHHHHHHHHHHHHHHHHHTTCSEEECCTTTT-SCCGGGSCCCCHHHHHTTSBSSSSCTTTHHH
T ss_pred ccEEEEEEEecCcccccCHHHHHHHHHHHHHHHHhcCCCEEEeccccc-cCCCccccccchhhhHHHHhhcCCCHHHHHH
Confidence 4699999999975 69999999999999999999999999999999 78754321 11111 1156788999
Q ss_pred HHHHHHcCcEEEeccceeecCCCC---ceEEEEEEECCCCCEEeeeecCCC
Q 033342 74 CSLARESSMWLSLGGFQEKGSDDA---RLCNTHVLLDDAGNIRSTYRKIHL 121 (121)
Q Consensus 74 ~~~a~~~~~~ii~G~~~~~~~~~~---~~~Ns~~~i~~~G~i~~~y~K~hL 121 (121)
+++|++++++|++|...+. .++ ++||++++++|+|++++.|+|+||
T Consensus 81 ~~~a~~~~~~iv~G~~~~~--~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL 129 (303)
T 1uf5_A 81 FEKAAELGIGFNLGYAELV--VEGGVKRRFNTSILVDKSGKIVGKYRKIHL 129 (303)
T ss_dssp HHHHHHHTCEEEEEEEEEE--EETTEEEEEEEEEEECTTSCEEEEEECCCC
T ss_pred HHHHHHhCeEEEEeeeEec--CCCCCcceeeEEEEECCCCCEeeeEeeeec
Confidence 9999999999999965542 234 799999999999999999999997
No 8
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=99.94 E-value=2.1e-26 Score=166.32 Aligned_cols=116 Identities=36% Similarity=0.602 Sum_probs=97.3
Q ss_pred CcccEEEEEEeccccCHHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCc-hhhhcccCCCChHHHHHHHHHHHcCc
Q 033342 4 AHSVRVAVAQMTSINDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDA-DNIKIAEPLDGPIMQGYCSLARESSM 82 (121)
Q Consensus 4 ~~~~~ia~vQ~~~~~~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~a~~~~~ 82 (121)
+..+|||++|+++..|.+.|++++.+++++|++.|+|||||||+++ +++... ....+++..+++..+.++++|+++++
T Consensus 12 ~~~~kVa~vQ~~~~~d~~~nl~~~~~li~~A~~~gadlvv~PE~~~-~~~~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i 90 (440)
T 1ems_A 12 TGRHFIAVCQMTSDNDLEKNFQAAKNMIERAGEKKCEMVFLPECFD-FIGLNKNEQIDLAMATDCEYMEKYRELARKHNI 90 (440)
T ss_dssp CSEEEEEEECBCCCSCHHHHHHHHHHHHHHHHHTTCSEEEECTTCS-CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCceEEEEecCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCccc-ccCcchhHHHHhhccCCCHHHHHHHHHHHHcCe
Confidence 3579999999999899999999999999999999999999999998 555432 22233333456789999999999999
Q ss_pred EEEeccce--eecCCCCceEEEEEEECCCCCEEeeeecCCC
Q 033342 83 WLSLGGFQ--EKGSDDARLCNTHVLLDDAGNIRSTYRKIHL 121 (121)
Q Consensus 83 ~ii~G~~~--~~~~~~~~~~Ns~~~i~~~G~i~~~y~K~hL 121 (121)
+|++|++. ++ ..++++||++++++|+|++++.|+|+||
T Consensus 91 ~iv~G~~~~~e~-~~~~~~yNs~~~i~~~G~i~~~yrK~hL 130 (440)
T 1ems_A 91 WLSLGGLHHKDP-SDAAHPWNTHLIIDSDGVTRAEYNKLHL 130 (440)
T ss_dssp EEEEEEEEEEET-TEEEEEEEEEEEECTTSCEEEEEECCCC
T ss_pred EEEecccccccc-CCCCcEEEEEEEECCCCcEEEEEeeeee
Confidence 99999766 42 1346899999999999999999999997
No 9
>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A
Probab=99.93 E-value=4.6e-25 Score=157.96 Aligned_cols=117 Identities=22% Similarity=0.313 Sum_probs=95.1
Q ss_pred CcccEEEEEEeccc--------cCHHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCc-----hhhhcccCC-CChH
Q 033342 4 AHSVRVAVAQMTSI--------NDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDA-----DNIKIAEPL-DGPI 69 (121)
Q Consensus 4 ~~~~~ia~vQ~~~~--------~~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~-----~~~~~~~~~-~~~~ 69 (121)
.+++|||++|+++. .+.+.|++++.+++++|++.|+|||||||+++ ++|... .+..+++.. +++.
T Consensus 70 ~~~~rVAlvQ~~i~~~~~~~~~~d~~~nl~~~~~li~~A~~~gadLVVfPE~~l-~gy~~~~~~~~~~~~~ae~~~~~~~ 148 (405)
T 2vhh_A 70 RRIVRVGAIQNSIVIPTTAPIEKQREAIWNKVKTMIKAAAEAGCNIVCTQEAWT-MPFAFCTREKFPWCEFAEEAENGPT 148 (405)
T ss_dssp CCEEEEEEEECCCCSCSSSCHHHHHHHHHHHHHHHHHHHHHTTCSEEECCTTTT-SCSCC---------CCCBCTTTSHH
T ss_pred CCCCEEEEEeccccccccccccccHHHHHHHHHHHHHHHHHCCCCEEEcCCccc-ccccccccchhhHHHHHhhccCCHH
Confidence 35699999999863 46889999999999999999999999999998 676431 122344444 5788
Q ss_pred HHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEeeeecCCC
Q 033342 70 MQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYRKIHL 121 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~~y~K~hL 121 (121)
.+.++++|++++++|++|...+....++++||++++|+|+|++++.|+|+||
T Consensus 149 ~~~l~~lA~~~~i~Iv~G~~e~~~~~~~~~yNsa~vi~p~G~i~~~YrK~hL 200 (405)
T 2vhh_A 149 TKMLAELAKAYNMVIIHSILERDMEHGETIWNTAVVISNSGRYLGKHRKNHI 200 (405)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEEETTTTTEEEEEEEEECTTSCEEEEEECSCC
T ss_pred HHHHHHHHHHCCEEEEEeceecccCCCCcEEEEEEEECCCCeEEEEEecccC
Confidence 9999999999999999996654211257899999999999999999999997
No 10
>2dyu_A Formamidase; AMIF, CEK, catalytic triad, helicobacter pylori aliphatic amidase, hydrolase; 1.75A {Helicobacter pylori} PDB: 2dyv_A 2e2l_A 2e2k_A
Probab=99.93 E-value=2.3e-25 Score=156.13 Aligned_cols=114 Identities=22% Similarity=0.324 Sum_probs=94.9
Q ss_pred cccEEEEEEecc-----ccCHHHHHHHHHHHHHHHHH--CCCcEEEccCCccCCCCCCc--hhhhcccCCCChHHHHHHH
Q 033342 5 HSVRVAVAQMTS-----INDLAANFATCSRLVKEAAS--AGAKLLCFPENFSYVGDKDA--DNIKIAEPLDGPIMQGYCS 75 (121)
Q Consensus 5 ~~~~ia~vQ~~~-----~~~~~~n~~~~~~~~~~a~~--~~~dlvv~PE~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~ 75 (121)
.++|||++|+++ .+|.+.|++++.+++++|++ .++|||||||+++ +||... +...+++..+++.++.|++
T Consensus 12 ~~~~Va~vQ~~i~~~~~~~d~~~nl~~~~~li~~A~~~~~gadLVVfPE~~l-~G~~~~~~~~~~~a~~~~~~~~~~l~~ 90 (334)
T 2dyu_A 12 EGFLVAAIQFPVPIVNSRKDIDHNIESIIRTLHATKAGYPGVELIIFPEYST-QGLNTAKWLSEEFLLDVPGKETELYAK 90 (334)
T ss_dssp -CEEEEEECCBCCCCCSHHHHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTT-TCCCTTTTTSGGGCBCSSSHHHHHHHH
T ss_pred CccEEEEEecCCccCCchhhHHHHHHHHHHHHHHHHhcCCCCcEEEcCCCcc-ccCCCChhHHHHhhccCCCHHHHHHHH
Confidence 469999999985 36889999999999999987 7999999999999 775432 2344555567889999999
Q ss_pred HHHHcCcEEEeccceeecCCCCc--eEEEEEEECCCCCEEeeeecCCC
Q 033342 76 LARESSMWLSLGGFQEKGSDDAR--LCNTHVLLDDAGNIRSTYRKIHL 121 (121)
Q Consensus 76 ~a~~~~~~ii~G~~~~~~~~~~~--~~Ns~~~i~~~G~i~~~y~K~hL 121 (121)
+|+++++++++|..++ . .+++ +||++++|+|+|++++.|+|+||
T Consensus 91 ~a~~~~i~iv~G~~e~-~-~~~~~~~yNsa~vi~p~G~i~~~YrK~hl 136 (334)
T 2dyu_A 91 ACKEAKVYGVFSIMER-N-PDSNKNPYNTAIIIDPQGEIILKYRKLFP 136 (334)
T ss_dssp HHHHHTCEEEEEEEEC-C-SSTTSCCEEEEEEECTTSCEEEEEECSSC
T ss_pred HHHHhCeEEEEeeEEE-C-CCCCceeEEEEEEECCCCCEEEEEeeccC
Confidence 9999999999996544 2 2344 99999999999999999999996
No 11
>2uxy_A Aliphatic amidase; nitrilase superfamily, hydrolase, acyl transfer, thiol enzymes, hydroxamic acid; HET: C3Y; 1.25A {Pseudomonas aeruginosa} PDB: 2plq_A
Probab=99.93 E-value=1.9e-25 Score=156.88 Aligned_cols=116 Identities=24% Similarity=0.336 Sum_probs=96.7
Q ss_pred cccEEEEEEecc-----ccCHHHHHHHHHHHHHHHHH--CCCcEEEccCCccCCCCCC--chhhhcccCCCChHHHHHHH
Q 033342 5 HSVRVAVAQMTS-----INDLAANFATCSRLVKEAAS--AGAKLLCFPENFSYVGDKD--ADNIKIAEPLDGPIMQGYCS 75 (121)
Q Consensus 5 ~~~~ia~vQ~~~-----~~~~~~n~~~~~~~~~~a~~--~~~dlvv~PE~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~ 75 (121)
.++|||++|+++ .+|.+.|++++.+++++|++ .++|||||||+++ +||.. +++..+++..+++.++.|++
T Consensus 11 ~~~kValvQ~~i~~~~~~~d~~~Nl~~i~~~i~~A~~~~~gadLVVfPE~~l-~G~~~~~~~~~~~a~~~~~~~~~~l~~ 89 (341)
T 2uxy_A 11 DTVGVAVVNYKMPRLHTAAEVLDNARKIAEMIVGMKQGLPGMDLVVFPEYSL-QGIMYDPAEMMETAVAIPGEETEIFSR 89 (341)
T ss_dssp TEEEEEEECCBCCBCCSHHHHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTT-TBCCCSHHHHHHHCBCSSSHHHHHHHH
T ss_pred CccEEEEEECCcccCCCccCHHHHHHHHHHHHHHHHhcCCCCcEEEeCCCcc-cccCCCHHHHHHHhccCCCHHHHHHHH
Confidence 579999999995 36899999999999999987 7999999999998 77543 34555666667899999999
Q ss_pred HHHHcCcEEEeccceeecCC--CCceEEEEEEECCCCCEEeeeecCCC
Q 033342 76 LARESSMWLSLGGFQEKGSD--DARLCNTHVLLDDAGNIRSTYRKIHL 121 (121)
Q Consensus 76 ~a~~~~~~ii~G~~~~~~~~--~~~~~Ns~~~i~~~G~i~~~y~K~hL 121 (121)
+|+++++++++|...++... ++++||++++|+|+|++++.|+|+||
T Consensus 90 ~a~~~~i~iv~G~~ge~~~~~~~~~~yNsa~vi~p~G~i~~~Y~K~hl 137 (341)
T 2uxy_A 90 ACRKANVWGVFSLTGERHEEHPRKAPYNTLVLIDNNGEIVQKYRKIIP 137 (341)
T ss_dssp HHHHHTCEEEEEEEEECCTTTTSSCCEEEEEEECTTSCEEEEEECSSC
T ss_pred HHHHhCcEEEEEeeeeEcCCCCCCceEEEEEEECCCCcEEEEEEeecc
Confidence 99999999999965132222 24599999999999999999999997
No 12
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=99.92 E-value=2.8e-25 Score=166.37 Aligned_cols=114 Identities=20% Similarity=0.245 Sum_probs=96.4
Q ss_pred CCCCcccEEEEEEeccc-cCHHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHH
Q 033342 1 MAGAHSVRVAVAQMTSI-NDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARE 79 (121)
Q Consensus 1 ~~~~~~~~ia~vQ~~~~-~~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~ 79 (121)
|+ |+.+|||++|+++. +|++.|++++.+.+++|++.|+|||||||+++ +||.+++.. +.+...++..+.+.++|++
T Consensus 1 m~-M~~~rVA~~Q~~~~~~d~~~N~~~i~~~i~~A~~~gadLvVfPEl~l-tGY~~~dl~-~~~~~~~~~~~~l~~la~~ 77 (634)
T 3ilv_A 1 MS-LSTIRIGGAAVNQTPIDWENNVKNILDAIEEAKNANVEILCLPELCI-TGYGCEDLF-LTDWVAETAIEYCFEIAAS 77 (634)
T ss_dssp ----CEEEEEEEEECCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTT-TCSCCGGGG-GSHHHHHHHHHHHHHHHTT
T ss_pred CC-CCCeEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEcCCCcc-ccCChHHHh-hChhhhHHHHHHHHHHHHh
Confidence 55 56799999999986 89999999999999999999999999999999 899887653 2333445678889999998
Q ss_pred c-CcEEEeccceeecCCCCceEEEEEEECCCCCEEeeeecCCC
Q 033342 80 S-SMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYRKIHL 121 (121)
Q Consensus 80 ~-~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~~y~K~hL 121 (121)
+ ++++++|...+ .++++||+++++ ++|++++.|+|+||
T Consensus 78 ~~~i~ivvG~p~~---~~~~lyNsa~vi-~~G~il~~y~K~hL 116 (634)
T 3ilv_A 78 CTDITVSLGLPMR---IAGITYNCVCLV-ENGIVKGFSAKQFL 116 (634)
T ss_dssp CTTSEEEEEEEEE---ETTEEEEEEEEE-ETTEEEEEEECSSC
T ss_pred CCCCEEEEeeeEe---eCCCccEEEEEE-ECCeEEEEEcCEeC
Confidence 6 89999995444 567899999999 79999999999997
No 13
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=99.90 E-value=8.2e-24 Score=157.51 Aligned_cols=114 Identities=25% Similarity=0.289 Sum_probs=94.9
Q ss_pred cccEEEEEEeccc-cCHHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHc--C
Q 033342 5 HSVRVAVAQMTSI-NDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARES--S 81 (121)
Q Consensus 5 ~~~~ia~vQ~~~~-~~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~--~ 81 (121)
++||||++|+++. +|++.|++++.+++++|++.|+|||||||+++ +||.+.++..... ......+.++++|+++ +
T Consensus 3 ~~~rvA~~Q~~~~~~d~~~N~~~i~~~i~~A~~~gadLvvfPEl~l-tGy~~~dl~~~~~-~~~~~~~~l~~la~~~~~~ 80 (590)
T 3n05_A 3 LQLRLALNQIDSTVGDIAGNAEAILRWTRHSAEQGAHLVAFPEMAL-TGYPVEDLALRSS-FVEASRTALRELAARLAEE 80 (590)
T ss_dssp EEEEEEEEECCCCTTCHHHHHHHHHHHHHHHHTTTCSEEECCTTTT-TCSCCGGGGGCHH-HHHHHHHHHHHHHHHHHHT
T ss_pred CccEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCcccc-cCCChHHHhhCHH-HHHHHHHHHHHHHHhhhhc
Confidence 4799999999986 99999999999999999999999999999999 8998876532221 3346778899999988 6
Q ss_pred ----cEEEeccceeecCCC-------CceEEEEEEECCCCCEEeeeecCCC
Q 033342 82 ----MWLSLGGFQEKGSDD-------ARLCNTHVLLDDAGNIRSTYRKIHL 121 (121)
Q Consensus 82 ----~~ii~G~~~~~~~~~-------~~~~Ns~~~i~~~G~i~~~y~K~hL 121 (121)
+++++|+..+....+ +++||++++++ +|++++.|+|+||
T Consensus 81 ~~~~i~ivvG~~~~~~~~~~~~~~~~~~lyNsa~vi~-~G~i~~~y~K~~L 130 (590)
T 3n05_A 81 GFGELPVLVGYLDRSESAQPKYGQPAGAPRNAAAVLH-RGRVALTFAKHHL 130 (590)
T ss_dssp TCTTSCEEEEEEEECSSCBTTTTBCTTCEEEEEEEEE-TTEEEEEEECCCC
T ss_pred cCCceEEEEeeEEEEcCcccccccccCCeeEEEEEEe-CCEEEEEEeCccC
Confidence 999999766531111 47999999998 8999999999997
No 14
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A*
Probab=99.90 E-value=4.6e-24 Score=160.78 Aligned_cols=112 Identities=23% Similarity=0.212 Sum_probs=95.7
Q ss_pred cccEEEEEEeccc-cCHHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhccc--CCCChHHHHHHHHHHHcC
Q 033342 5 HSVRVAVAQMTSI-NDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAE--PLDGPIMQGYCSLARESS 81 (121)
Q Consensus 5 ~~~~ia~vQ~~~~-~~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~a~~~~ 81 (121)
..+|||++|+++. +|++.|++++.+++++|++.|+|||||||+++ +||...+...... ....+.++.|.++|++++
T Consensus 11 g~~rVAl~Q~~~~~~D~~~N~~~i~~~i~~A~~~gadLvVfPEl~l-tGY~~~dl~~~~~~~~~~~~~l~~l~~~a~~~~ 89 (680)
T 3sdb_A 11 GFVRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTL-SGYSIEDVLLQDSLLDAVEDALLDLVTESADLL 89 (680)
T ss_dssp TEEEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTT-TCGGGGGGGGCHHHHHHHHHHHHHHHHHHTTCS
T ss_pred CCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCCCcc-cCCChHHHhhCHHHHHhhHHHHHHHHHHhhcCC
Confidence 5799999999986 99999999999999999999999999999999 8998765422111 123467888999999999
Q ss_pred cEEEeccceeecCCCCceEEEEEEECCCCCEEeeeecCCC
Q 033342 82 MWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYRKIHL 121 (121)
Q Consensus 82 ~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~~y~K~hL 121 (121)
++|++|...+ .++++||++++++ +|++++.|+|+||
T Consensus 90 i~ivvG~p~~---~~~~lyNsa~vi~-~G~il~~y~K~hL 125 (680)
T 3sdb_A 90 PVLVVGAPLR---HRHRIYNTAVVIH-RGAVLGVVPKSYL 125 (680)
T ss_dssp SEEEEEEEEE---ETTEEEEEEEEEE-TTEEEEEEECSCC
T ss_pred cEEEEeceEE---eCCCceEEEEEEe-CCCEEEEEeeecC
Confidence 9999996444 5678999999998 8999999999997
No 15
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=99.89 E-value=4.8e-23 Score=152.61 Aligned_cols=115 Identities=25% Similarity=0.284 Sum_probs=87.1
Q ss_pred CcccEEEEEEeccc-cCHHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHH---
Q 033342 4 AHSVRVAVAQMTSI-NDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARE--- 79 (121)
Q Consensus 4 ~~~~~ia~vQ~~~~-~~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~--- 79 (121)
+.+||||++|+|+. +|++.|++++.+++++|+++|||||||||+++ +||.++++.. .+.......+.+.+++++
T Consensus 4 sMkmKIAlaQln~~vGD~~~N~~~i~~~i~~Aa~~GAdLvvfPEL~l-tGY~~~Dl~~-~~~~~~~~~~~l~~la~~~~~ 81 (565)
T 4f4h_A 4 SMKTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHFLIAPELAL-SGYPPEDLLL-RPAFYAASDAALAELAAQLKP 81 (565)
T ss_dssp --CEEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTT-TCSCCGGGGG-CHHHHHHHHHHHHHHHHHHTT
T ss_pred CcceEEEEEECCCCcccHHHHHHHHHHHHHHHHHCCCcEEECCCCcc-cCCChHHhhh-CHHHHHHHHHHHHHHHHHhhh
Confidence 34699999999986 89999999999999999999999999999999 9999876521 111122233444454433
Q ss_pred -cCcEEEeccceeecC-------------CCCceEEEEEEECCCCCEEeeeecCCC
Q 033342 80 -SSMWLSLGGFQEKGS-------------DDARLCNTHVLLDDAGNIRSTYRKIHL 121 (121)
Q Consensus 80 -~~~~ii~G~~~~~~~-------------~~~~~~Ns~~~i~~~G~i~~~y~K~hL 121 (121)
.++++++|...+... .++++||+++++. +|++++.|+|+||
T Consensus 82 ~~~i~ivvG~p~~~~~~~~~~~~~~~~~~~~~~lyNsa~vi~-~G~i~~~y~K~hL 136 (565)
T 4f4h_A 82 FAGLAVLVGHPLRAPSADGNANRAIERGVPPVDTYNAASLIV-GGEVAGTYRKQDL 136 (565)
T ss_dssp STTCEEEEEEEEECC-----CCCCCCTTSCCCSEEEEEEEEE-TTEEEEEEECCSC
T ss_pred cCCcEEEEeeeeeecccccccccceecccCCCceEEEEEEEE-CCEEEEEEeeeec
Confidence 578999995443111 2346999999997 6999999999997
No 16
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=94.25 E-value=0.22 Score=33.60 Aligned_cols=71 Identities=11% Similarity=0.157 Sum_probs=43.7
Q ss_pred HHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCC
Q 033342 31 VKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAG 110 (121)
Q Consensus 31 ~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G 110 (121)
.+..+..|+|+|+.|=.|. ... .......++.-|.+++++++.....-. ..+..++=.+.+++|+|
T Consensus 175 ~r~~~~~Gadli~~psa~~--~~~-----------~~~~~~~~~arA~en~~~vv~~n~~G~-~~~~~~~G~S~ii~p~G 240 (281)
T 3p8k_A 175 LRYPARSGAKIAFYVAQWP--MSR-----------LQHWHSLLKARAIENNMFVIGTNSTGF-DGNTEYAGHSIVINPNG 240 (281)
T ss_dssp HHHHHHTTCCEEEEEECCB--GGG-----------HHHHHHHHHHHHHHHTSEEEEEECEEE-CSSCEEECCCEEECTTS
T ss_pred HHHHHHCCCCEEEECCCCC--Ccc-----------HHHHHHHHHHHHHHcCCEEEEEccCcC-CCCcEEeeeEEEECCCC
Confidence 3445578999999996543 110 111233456678899999975433321 12334455678899999
Q ss_pred CEEee
Q 033342 111 NIRST 115 (121)
Q Consensus 111 ~i~~~ 115 (121)
+++..
T Consensus 241 ~vl~~ 245 (281)
T 3p8k_A 241 DLVGE 245 (281)
T ss_dssp CEEEE
T ss_pred CEEEe
Confidence 98765
No 17
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=93.34 E-value=0.18 Score=33.95 Aligned_cols=73 Identities=15% Similarity=0.132 Sum_probs=42.3
Q ss_pred HHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCC
Q 033342 31 VKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAG 110 (121)
Q Consensus 31 ~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G 110 (121)
.+.....|+|+++.|=.+. .... .......++.-|.+++++++.....-....+..++=.+.+++|+|
T Consensus 178 ~r~l~~~Ga~ll~~ps~~~---~~~~---------~~~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~~G~S~ii~p~G 245 (291)
T 1f89_A 178 AMLSARKGAFAMIYPSAFN---TVTG---------PLHWHLLARSRAVDNQVYVMLCSPARNLQSSYHAYGHSIVVDPRG 245 (291)
T ss_dssp HHHHHHTTEEEEEEECCCB---TTHH---------HHHHHHHHHHHHHHHTSEEEEECCCCCTTSSSCBCCCCEEECTTS
T ss_pred HHHHHhhCCCEEEECCcCC---CCCc---------HHHHHHHHHHHHHHcCCEEEEecCccCCCCCCeeeeEEEEECCCC
Confidence 3444568999999995432 1100 011234456678899998865432211111223455678999999
Q ss_pred CEEee
Q 033342 111 NIRST 115 (121)
Q Consensus 111 ~i~~~ 115 (121)
+++..
T Consensus 246 ~vl~~ 250 (291)
T 1f89_A 246 KIVAE 250 (291)
T ss_dssp CEEEE
T ss_pred CEEEe
Confidence 98754
No 18
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=93.09 E-value=0.42 Score=32.20 Aligned_cols=71 Identities=18% Similarity=0.181 Sum_probs=44.0
Q ss_pred HHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecCCCC-ceEEEEEEECC
Q 033342 30 LVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDA-RLCNTHVLLDD 108 (121)
Q Consensus 30 ~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~-~~~Ns~~~i~~ 108 (121)
..+..+..|+|+|+.|=.+. .... ......++..|.+++++++.....-. .++ .++=.+.+++|
T Consensus 173 ~~r~l~~~Ga~li~~ps~~~-~~~~------------~~~~~~~~~rA~en~~~vv~~n~~G~--~~~~~~~G~S~ii~p 237 (283)
T 3hkx_A 173 MVRAAAARGAQLVLVPTALA-GDET------------SVPGILLPARAVENGITLAYANHCGP--EGGLVFDGGSVVVGP 237 (283)
T ss_dssp HHHHHHHTTCSEEEEECCCB-SCCT------------HHHHTHHHHHHHHHTCEEEEECBEEE--ETTEEEECCCEEECT
T ss_pred HHHHHHHCCCCEEEECCCCC-Cccc------------HHHHHHHHHHHHHhCCEEEEEccccC--CCCeEEeeEEEEECC
Confidence 44455678999999997654 2211 11234456678899999876543321 222 23345788999
Q ss_pred CCCEEee
Q 033342 109 AGNIRST 115 (121)
Q Consensus 109 ~G~i~~~ 115 (121)
+|+++..
T Consensus 238 ~G~vl~~ 244 (283)
T 3hkx_A 238 AGQPLGE 244 (283)
T ss_dssp TSCEEEE
T ss_pred CCCEEEe
Confidence 9998754
No 19
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=92.62 E-value=0.27 Score=32.91 Aligned_cols=73 Identities=12% Similarity=0.150 Sum_probs=42.3
Q ss_pred HHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCC
Q 033342 31 VKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAG 110 (121)
Q Consensus 31 ~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G 110 (121)
.+..+..|+|+++.|=.+. .... .......++.-|.+++++++.....-....+..++=.+.+++|+|
T Consensus 162 ~r~~~~~ga~ll~~ps~~~---~~~~---------~~~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~~G~S~ii~p~G 229 (276)
T 2w1v_A 162 AQIYAQRGCQLLVYPGAFN---LTTG---------PAHWELLQRARAVDNQVYVATASPARDDKASYVAWGHSTVVDPWG 229 (276)
T ss_dssp HHHHHHTTEEEEEEECCCC---TTHH---------HHHHHHHHHHHHHHHTCEEEEECCCCCTTSSSCCCCCCEEECTTS
T ss_pred HHHHHHcCCCEEEECCcCC---CcCC---------HHHHHHHHHHHHHHcCcEEEEecccccCCCCceeeeEeEEECCCC
Confidence 3445568999999996443 1100 011233456677899998865532211111223445678899999
Q ss_pred CEEee
Q 033342 111 NIRST 115 (121)
Q Consensus 111 ~i~~~ 115 (121)
+++..
T Consensus 230 ~v~~~ 234 (276)
T 2w1v_A 230 QVLTK 234 (276)
T ss_dssp CEEEE
T ss_pred CEeEE
Confidence 98754
No 20
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=92.13 E-value=0.43 Score=31.64 Aligned_cols=68 Identities=12% Similarity=0.141 Sum_probs=42.4
Q ss_pred HHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCC
Q 033342 31 VKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAG 110 (121)
Q Consensus 31 ~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G 110 (121)
.+..+..|+|+++.|=.+. .. .....++.-|.+++++++.....-.. .+-.++=.+.+++|+|
T Consensus 155 ~r~~~~~ga~li~~ps~~~-~~---------------~~~~~~~~rA~en~~~vv~~n~~G~~-~~~~~~G~S~ii~p~G 217 (262)
T 3ivz_A 155 ARTLALKGADVIAHPANLV-MP---------------YAPRAMPIRALENKVYTVTADRVGEE-RGLKFIGKSLIASPKA 217 (262)
T ss_dssp HHHHHHTTCSEEEEEECCC-SS---------------CHHHHHHHHHHHHTCEEEEEECCSEE-TTEECCCCCEEECTTS
T ss_pred HHHHHHCCCCEEEEcCCCC-ch---------------HHHHHHHHHHHhcCcEEEEECCCCcC-CCceEeeeEEEECCCC
Confidence 4455678999999997654 10 12345567788999988655322110 1112334478899999
Q ss_pred CEEee
Q 033342 111 NIRST 115 (121)
Q Consensus 111 ~i~~~ 115 (121)
+++..
T Consensus 218 ~il~~ 222 (262)
T 3ivz_A 218 EVLSM 222 (262)
T ss_dssp CEEEE
T ss_pred CEeec
Confidence 98754
No 21
>2uxy_A Aliphatic amidase; nitrilase superfamily, hydrolase, acyl transfer, thiol enzymes, hydroxamic acid; HET: C3Y; 1.25A {Pseudomonas aeruginosa} PDB: 2plq_A
Probab=92.11 E-value=0.68 Score=32.14 Aligned_cols=72 Identities=8% Similarity=0.092 Sum_probs=44.8
Q ss_pred HHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCC
Q 033342 30 LVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDA 109 (121)
Q Consensus 30 ~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~ 109 (121)
..+.++..|+|+|+.|=.|. .+ . .......++.-|.+++++++.-...-. ..+..++=.+.+++|+
T Consensus 174 ~~r~l~~~Gadlll~psa~~-~~--~----------~~~~~~l~~arA~En~~~vv~an~~G~-~~~~~~~G~S~Iidp~ 239 (341)
T 2uxy_A 174 IWRDCAMKGAELIVRCQGYM-YP--A----------KDQQVMMAKAMAWANNCYVAVANAAGF-DGVYSYFGHSAIIGFD 239 (341)
T ss_dssp HHHHHHHTTCSEEEEEECCB-TT--C----------HHHHHHHHHHHHHHHTCEEEEEECEEE-CSSCEEECCCEEECTT
T ss_pred HHHHHHHcCCCEEEEcCCCC-CC--c----------HHHHHHHHHHHHHhCCcEEEEECCCCC-CCCceeeeEEEEECCC
Confidence 44555568999999996553 11 0 112344556778899999876543321 1222344567889999
Q ss_pred CCEEee
Q 033342 110 GNIRST 115 (121)
Q Consensus 110 G~i~~~ 115 (121)
|+++..
T Consensus 240 G~vla~ 245 (341)
T 2uxy_A 240 GRTLGE 245 (341)
T ss_dssp SCEEEE
T ss_pred CCEEEE
Confidence 998764
No 22
>2dyu_A Formamidase; AMIF, CEK, catalytic triad, helicobacter pylori aliphatic amidase, hydrolase; 1.75A {Helicobacter pylori} PDB: 2dyv_A 2e2l_A 2e2k_A
Probab=91.82 E-value=0.85 Score=31.52 Aligned_cols=72 Identities=14% Similarity=0.047 Sum_probs=44.1
Q ss_pred HHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCC
Q 033342 30 LVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDA 109 (121)
Q Consensus 30 ~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~ 109 (121)
..+..+..|+|+|+.|=.+. ... .......++..|.+++++++.-...-. ..+..++=.+.+++|+
T Consensus 174 ~~r~~~~~Gadlil~psaw~-~~~------------~~~~~~~~~arA~En~~~vv~an~~G~-~~~~~~~G~S~Iidp~ 239 (334)
T 2dyu_A 174 LAREAAYKGCNVYIRISGYS-TQV------------NDQWILTNRSNAWHNLMYTVSVNLAGY-DNVFYYFGEGQICNFD 239 (334)
T ss_dssp HHHHHHHTTCSEEEEEESSC-TTS------------HHHHHHHHHHHHHHHTCEEEEEECSBS-SSSCCCCCEEEEECTT
T ss_pred HHHHHHHcCCCEEEEeCCCC-CCc------------HHHHHHHHHHHHHhCCCEEEEECCCcC-CCCeeeeeEEEEECCC
Confidence 44555568999999986543 110 012334556778899998865432211 1222455667889999
Q ss_pred CCEEee
Q 033342 110 GNIRST 115 (121)
Q Consensus 110 G~i~~~ 115 (121)
|+++..
T Consensus 240 G~vla~ 245 (334)
T 2dyu_A 240 GTTLVQ 245 (334)
T ss_dssp SCEEEE
T ss_pred CCEeee
Confidence 998764
No 23
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=91.62 E-value=0.59 Score=33.48 Aligned_cols=73 Identities=15% Similarity=0.162 Sum_probs=42.9
Q ss_pred HHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCC
Q 033342 31 VKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAG 110 (121)
Q Consensus 31 ~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G 110 (121)
.+..+..|+|+++.|=.+. .. .. .......++.-|.+++++++.....-....+..++=.+.+++|+|
T Consensus 178 ~r~l~~~Ga~il~~psa~~-~~--------~~---~~~~~~~~~arA~En~~~vv~an~~G~~~~~~~~~G~S~ii~P~G 245 (440)
T 1ems_A 178 SLWNRKRGAQLLSFPSAFT-LN--------TG---LAHWETLLRARAIENQCYVVAAAQTGAHNPKRQSYGHSMVVDPWG 245 (440)
T ss_dssp HHHHHHTTCSEEECCBCCC-HH--------HH---HHHHHHHHHHHHHHHTCEEEECBBEEEEETTEEEECCCEEECTTS
T ss_pred HHHHHHcCCcEEEECCcCC-CC--------Cc---HHHHHHHHHHHHHhcCcEEEEecccccCCCCceeeeeeEEECCCC
Confidence 4444568999999996543 00 00 002233456678899999976543321111123344678999999
Q ss_pred CEEee
Q 033342 111 NIRST 115 (121)
Q Consensus 111 ~i~~~ 115 (121)
+++..
T Consensus 246 ~vla~ 250 (440)
T 1ems_A 246 AVVAQ 250 (440)
T ss_dssp CEEEE
T ss_pred Ceecc
Confidence 98764
No 24
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=91.35 E-value=0.33 Score=36.19 Aligned_cols=74 Identities=19% Similarity=0.213 Sum_probs=47.1
Q ss_pred HHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCC
Q 033342 30 LVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDA 109 (121)
Q Consensus 30 ~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~ 109 (121)
..+.++..||++++.|=.+. ..... .......++..|.+++++++.-...-. .++-.++-.+++++|+
T Consensus 177 ~~r~la~~GA~ii~~psAs~-~~~gk----------~~~r~~ll~arA~e~~~~vvy~N~vG~-~~~~~f~G~S~iidp~ 244 (565)
T 4f4h_A 177 AAQLAKAAGAQVLIVPNGSP-YHMNK----------DAVRIDILRARIRETGLPMVYVNLVGG-QDELVFDGGSFVLDGA 244 (565)
T ss_dssp HHHHHHHTTCSEEEEEECCB-CCTTH----------HHHHHHHHHHHHHHHCCCEEEEECEEE-ETTEEEEBCCEEECTT
T ss_pred hhHHHHhCCCeeeecccccc-cccCc----------HHHHHHHHHHHHHHhCCcEEEeeeecC-CCCeEEECCcceecCC
Confidence 34455678999999997664 11111 111234567788899998865543321 1333566788999999
Q ss_pred CCEEee
Q 033342 110 GNIRST 115 (121)
Q Consensus 110 G~i~~~ 115 (121)
|+++..
T Consensus 245 G~vla~ 250 (565)
T 4f4h_A 245 GELVAK 250 (565)
T ss_dssp SCEEEE
T ss_pred CcEEEE
Confidence 998764
No 25
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=90.45 E-value=1 Score=33.66 Aligned_cols=72 Identities=19% Similarity=0.148 Sum_probs=45.1
Q ss_pred HHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecCCCCc-eEEEEEEECCC
Q 033342 31 VKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDAR-LCNTHVLLDDA 109 (121)
Q Consensus 31 ~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~-~~Ns~~~i~~~ 109 (121)
.+.++..|+|+++.|=.+. .... ........++.-|.+++++++.-...-. .++. +.=.+++++|+
T Consensus 173 ~~~la~~Ga~ii~~psa~p-~~~g----------k~~~~~~l~~~rA~e~~~~vv~an~~G~--~~~~~f~G~S~iidp~ 239 (590)
T 3n05_A 173 VPAARSAGAGLLLSVNASP-YERD----------KDDTRLELVRKRAQEAGCTTAYLAMIGG--QDELVFDGDSIVVDRD 239 (590)
T ss_dssp HHHHHHTTCSEEEEEECCB-CCCC----------SSCHHHHHHHHHHHHHTSEEEEEECEEE--ETTEEEEBCCEEECTT
T ss_pred HHHHHHcCCCEEEEecCCc-cccC----------cHHHHHHHHHHHHHHhCCEEEEEecccC--CCCeEEeCcEEEECCC
Confidence 3445578999999986654 1111 1223355677788999999875543321 2223 34467888999
Q ss_pred CCEEee
Q 033342 110 GNIRST 115 (121)
Q Consensus 110 G~i~~~ 115 (121)
|+++..
T Consensus 240 G~vla~ 245 (590)
T 3n05_A 240 GEVVAR 245 (590)
T ss_dssp SCEEEE
T ss_pred CcEEEE
Confidence 998764
No 26
>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A
Probab=89.41 E-value=1.3 Score=31.39 Aligned_cols=63 Identities=11% Similarity=0.062 Sum_probs=41.7
Q ss_pred CHHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhc-ccCCCChHHHHHHHHHHHcCcE
Q 033342 19 DLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKI-AEPLDGPIMQGYCSLARESSMW 83 (121)
Q Consensus 19 ~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~a~~~~~~ 83 (121)
+...|++.+.+.++.....|.-++||||..=.-+ ..++- .+ ..++.....+.+..+|.+.+++
T Consensus 204 ~~r~n~ksl~~~~~~Lk~GG~sI~IFPEGTRsR~-~~~~g-~l~~~~Fk~gs~~~~~~LA~ksg~P 267 (367)
T 1iuq_A 204 KRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRP-DPSTG-EWYPAPFDASSVDNMRRLIQHSDVP 267 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEECTTCSCCCB-CTTTC-CBCCCCCCHHHHHHHHHHHHTSSSC
T ss_pred hhHHHHHHHHHHHHHHHcCCeEEEEeCCCCCCCC-CCCCC-ccccccccchhhhHHHHHHHHcCCC
Confidence 3456777777777766677899999999874111 11000 11 2236677888899999999988
No 27
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=89.30 E-value=2.8 Score=27.65 Aligned_cols=64 Identities=11% Similarity=0.047 Sum_probs=39.1
Q ss_pred CCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecCCC-CceEEEEEEECCCCCEEee
Q 033342 38 GAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDD-ARLCNTHVLLDDAGNIRST 115 (121)
Q Consensus 38 ~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~~~-~~~~Ns~~~i~~~G~i~~~ 115 (121)
|+|+++.|=.|. ... .......++.-|.+++++++.....-. ..+ ..++=.+.+++|+|+++..
T Consensus 165 ga~~i~~~s~w~--~~~-----------~~~~~~~~~~rA~en~~~vv~an~~G~-~~~~~~~~G~S~ii~p~G~v~~~ 229 (266)
T 2e11_A 165 DFDLQLFVANWP--SAR-----------AYAWKTLLRARAIENLCFVAAVNRVGV-DGNQLHYAGDSAVIDFLGQPQVE 229 (266)
T ss_dssp SCSEEEEEECCC--GGG-----------HHHHHHHHHHHHHHTTSEEEEEECEEE-CTTSCEEEEEEEEECTTSCEEEE
T ss_pred CCcEEEEeCCCC--CCc-----------hHHHHHHHHHHHHhcCcEEEEEcCCcC-CCCCceEeeeEEEECCCCceeee
Confidence 899999887653 110 012334556778899999865533221 112 1344568899999998754
No 28
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=87.84 E-value=3 Score=28.19 Aligned_cols=73 Identities=10% Similarity=0.127 Sum_probs=44.9
Q ss_pred cEEEEEEecc------ccCHHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHc
Q 033342 7 VRVAVAQMTS------INDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARES 80 (121)
Q Consensus 7 ~~ia~vQ~~~------~~~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~ 80 (121)
+++..+.... ....+..++.+.+.++.|..-|++.|++|- .......+.+.. .-+.+..+.+.|+++
T Consensus 90 L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~--~~~~~~~~~~~~-----~~~~l~~l~~~a~~~ 162 (305)
T 3obe_A 90 LRISSSHLTPSLREYTKENMPKFDEFWKKATDIHAELGVSCMVQPS--LPRIENEDDAKV-----VSEIFNRAGEITKKA 162 (305)
T ss_dssp CEEEEEBCCCSCCCCCGGGHHHHHHHHHHHHHHHHHHTCSEEEECC--CCCCSSHHHHHH-----HHHHHHHHHHHHHTT
T ss_pred CeEEEeeccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEeCC--CCCCCCHHHHHH-----HHHHHHHHHHHHHHc
Confidence 5665555433 123566788888999999899999999872 211111111111 124566777788899
Q ss_pred CcEEEe
Q 033342 81 SMWLSL 86 (121)
Q Consensus 81 ~~~ii~ 86 (121)
|+.+.+
T Consensus 163 Gv~l~l 168 (305)
T 3obe_A 163 GILWGY 168 (305)
T ss_dssp TCEEEE
T ss_pred CCEEEE
Confidence 987753
No 29
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=84.09 E-value=2 Score=28.88 Aligned_cols=43 Identities=12% Similarity=0.221 Sum_probs=27.2
Q ss_pred HHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEee
Q 033342 72 GYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRST 115 (121)
Q Consensus 72 ~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~~ 115 (121)
.++.-|.+++++++.....-.. .+..++=.+.+++|+|+++..
T Consensus 218 ~~~~rA~en~~~vv~~n~~G~~-~~~~~~G~S~ii~p~G~vl~~ 260 (303)
T 1uf5_A 218 SMQAGSYQNGAWSAAAGKAGME-ENCMLLGHSCIVAPTGEIVAL 260 (303)
T ss_dssp HHHHHHHHHTCEEEEEEBCEEE-TTEEECCCCEEECTTSCEEEE
T ss_pred HHHhhhhcCCcEEEEECccccc-CCccccceeEEECCCCCEecc
Confidence 3566788999998655332211 222344557889999998764
No 30
>4fva_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; HET: EDO; 2.07A {Caenorhabditis elegans}
Probab=83.70 E-value=1.2 Score=28.41 Aligned_cols=40 Identities=18% Similarity=0.261 Sum_probs=25.5
Q ss_pred ccEEEEEEeccc----cCHHHHHHHHHHHHHHHHHCCCcEEEccCCc
Q 033342 6 SVRVAVAQMTSI----NDLAANFATCSRLVKEAASAGAKLLCFPENF 48 (121)
Q Consensus 6 ~~~ia~vQ~~~~----~~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~ 48 (121)
.+++.++..|+. .+.....+.+.+.++ +.++|||+|.|..
T Consensus 11 ~~~l~v~s~Ni~g~~~~~~~~r~~~i~~~i~---~~~pDIi~LQEv~ 54 (256)
T 4fva_A 11 GFEVSVMSWNIDGLDGRSLLTRMKAVAHIVK---NVNPDILFLQEVV 54 (256)
T ss_dssp TCEEEEEEEECCTTCCTTHHHHHHHHHHHHH---HHCCSEEEEEEEC
T ss_pred CCEEEEEEEecCCCCCcCHHHHHHHHHHHHH---HcCCCEEEEEecC
Confidence 355666666664 234444555555554 5689999999975
No 31
>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A
Probab=82.77 E-value=2.4 Score=30.18 Aligned_cols=72 Identities=10% Similarity=-0.021 Sum_probs=40.7
Q ss_pred HHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecC---------------CC
Q 033342 32 KEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGS---------------DD 96 (121)
Q Consensus 32 ~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~---------------~~ 96 (121)
+..+..|+|+|+.|=.+. +.... ......++.-|.+++++++.....-... ..
T Consensus 244 r~la~~GAdill~psa~~--~~~~~----------~~w~~l~raRAiEn~~~Vv~aN~vG~~~~~~~~~~~~g~~~~~~~ 311 (405)
T 2vhh_A 244 MMFGLNGAEIVFNPSATI--GRLSE----------PLWSIEARNAAIANSYFTVPINRVGTEQFPNEYTSGDGNKAHKEF 311 (405)
T ss_dssp HHHHHTTCSEEEEEECCB--CTTTH----------HHHHHHHHHHHHHHTSEEEEEECEECCCCC---------------
T ss_pred HHHHHcCCCEEEEcccCC--CCCCH----------HHHHHHHHHHHHHcCceEEEeccccccccccccccccCccccccC
Confidence 334567999999998664 21100 1122345666788999886543221100 00
Q ss_pred CceEEEEEEECCCCCEEee
Q 033342 97 ARLCNTHVLLDDAGNIRST 115 (121)
Q Consensus 97 ~~~~Ns~~~i~~~G~i~~~ 115 (121)
..++=.+++++|+|+++..
T Consensus 312 ~~f~G~S~IidP~G~vla~ 330 (405)
T 2vhh_A 312 GPFYGSSYVAAPDGSRTPS 330 (405)
T ss_dssp --EECCCCCBCTTSCBCCC
T ss_pred ceeccccceECCCCCEeec
Confidence 1235567889999988643
No 32
>4f1h_A Tyrosyl-DNA phosphodiesterase 2; hydrolase-DNA complex; HET: DNA; 1.66A {Danio rerio} PDB: 4fpv_A* 4f1h_B*
Probab=80.24 E-value=1.4 Score=27.64 Aligned_cols=40 Identities=8% Similarity=0.068 Sum_probs=24.1
Q ss_pred ccEEEEEEeccc--cCHHHHHHHHHHHHHHHHHCCCcEEEccCCc
Q 033342 6 SVRVAVAQMTSI--NDLAANFATCSRLVKEAASAGAKLLCFPENF 48 (121)
Q Consensus 6 ~~~ia~vQ~~~~--~~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~ 48 (121)
++||.....+.. .+.....+.+.+.++ +.++|||+|.|..
T Consensus 3 ~l~v~t~Ni~g~~~~~~~~r~~~i~~~i~---~~~pDIi~LQEv~ 44 (250)
T 4f1h_A 3 KLSIISWNVDGLDTLNLADRARGLCSYLA---LYTPDVVFLQELI 44 (250)
T ss_dssp CEEEEEEECCTTCCTTHHHHHHHHHHHHH---HHCCSEEEEEEEC
T ss_pred eEEEEEEEeCCCCCcCHHHHHHHHHHHHH---HcCCCEEEEEeCC
Confidence 456655544321 234444555555554 4589999999964
No 33
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=80.02 E-value=4.4 Score=27.63 Aligned_cols=81 Identities=17% Similarity=0.129 Sum_probs=50.3
Q ss_pred cccEEEEEEeccccC--------------------HHHHHHHHHHHHHHHHHCCCcEEEc-cCCccCCCCCCchhhhccc
Q 033342 5 HSVRVAVAQMTSIND--------------------LAANFATCSRLVKEAASAGAKLLCF-PENFSYVGDKDADNIKIAE 63 (121)
Q Consensus 5 ~~~~ia~vQ~~~~~~--------------------~~~n~~~~~~~~~~a~~~~~dlvv~-PE~~~~~~~~~~~~~~~~~ 63 (121)
..+|+|.+-++...+ ...|++.+.+.++.+.+.|.+++=+ .|++..+..+...+ .. .
T Consensus 21 ~~~rlG~~~~~~~~~~~~~~t~~~~~~~~~~l~~~~~~nl~~l~~~l~~~~~~gi~~~ri~s~~f~~ft~~~~~w-~~-~ 98 (301)
T 2j6v_A 21 HMIRLGYPCENLTLGATTNRTLRLAHLTEERVREKAAENLRDLERILRFNADHGFALFRIGQHLIPFASHPLFPY-DW-E 98 (301)
T ss_dssp CSEEEEEESEETTTTEESCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEECCGGGSTTTTSTTCCS-CH-H
T ss_pred CeeEEEEEEEeccCCCCCccceeHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEeccCcccccCCCcccC-Cc-C
Confidence 357888886654322 2679999999999999999888766 34433111111111 01 0
Q ss_pred CCCChHHHHHHHHHHHcCcEEEec
Q 033342 64 PLDGPIMQGYCSLARESSMWLSLG 87 (121)
Q Consensus 64 ~~~~~~~~~l~~~a~~~~~~ii~G 87 (121)
+...+..+.+.++++++++.+++-
T Consensus 99 ~~~~~~~~~~~~~~~~~gi~i~~H 122 (301)
T 2j6v_A 99 GAYEEELARLGALARAFGQRLSMH 122 (301)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred CCCHHHHHHHHHHHHHcCCeEEEe
Confidence 122356778899999999866443
No 34
>1vyb_A ORF2 contains A reverse transcriptase domain; endonuclease, APE-1 type, retrotransposition, retrotransposon, transferase; 1.8A {Homo sapiens} SCOP: d.151.1.1 PDB: 2v0s_A 2v0r_A
Probab=79.11 E-value=4.1 Score=25.67 Aligned_cols=40 Identities=13% Similarity=0.207 Sum_probs=22.8
Q ss_pred cEEEEEEecccc-CHHHHHHHHHHHHHHHHHCCCcEEEccCCcc
Q 033342 7 VRVAVAQMTSIN-DLAANFATCSRLVKEAASAGAKLLCFPENFS 49 (121)
Q Consensus 7 ~~ia~vQ~~~~~-~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~ 49 (121)
+.+.+++.|+.+ ......+.+.+.++ +.++|||++.|+..
T Consensus 6 ~~lri~t~Nv~g~~~~~~~~~~~~~i~---~~~~DIv~LQE~~~ 46 (238)
T 1vyb_A 6 SHITILTLNINGLNSAIKRHRLASWIK---SQDPSVCCIQETHL 46 (238)
T ss_dssp CCEEEEEEECSCCCSHHHHHHHHHHHH---HHCCSEEEEECCCC
T ss_pred CcceEEEEecccCCchhhHHHHHHHHH---HcCCCEEEEecccC
Confidence 445555666542 11112234444444 46899999999865
No 35
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=78.80 E-value=3.5 Score=27.62 Aligned_cols=46 Identities=7% Similarity=0.031 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 26 TCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 26 ~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
.+.+.+.+..+.|.|+|+....++ .+.++.+.|.+.|++.+..+.+
T Consensus 72 av~e~~~~iL~aG~dvv~~S~gaL---------------ad~~l~~~L~~aA~~gg~~l~v 117 (253)
T 1j5p_A 72 AVKEYSLQILKNPVNYIIISTSAF---------------ADEVFRERFFSELKNSPARVFF 117 (253)
T ss_dssp HHHHHHHHHTTSSSEEEECCGGGG---------------GSHHHHHHHHHHHHTCSCEEEC
T ss_pred HHHHHHHHHHHCCCCEEEcChhhh---------------cCHHHHHHHHHHHHHCCCeEEe
Confidence 555667777788999999998776 1345678889999988877754
No 36
>3teb_A Endonuclease/exonuclease/phosphatase; PSI-biology, MCSG, midwest center for structural genomics; 2.99A {Leptotrichia buccalis c-1013-b}
Probab=78.56 E-value=4.2 Score=26.16 Aligned_cols=41 Identities=5% Similarity=0.150 Sum_probs=26.4
Q ss_pred ccEEEEEEeccc--cCHHHHHHHHHHHHHHHHHCCCcEEEccCCcc
Q 033342 6 SVRVAVAQMTSI--NDLAANFATCSRLVKEAASAGAKLLCFPENFS 49 (121)
Q Consensus 6 ~~~ia~vQ~~~~--~~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~ 49 (121)
++||+....+.. .+....++++.+.++ ..++|||++.|...
T Consensus 3 ~l~v~t~Ni~~~~~~~~~~~~~~i~~~i~---~~~~DIi~LQEv~~ 45 (266)
T 3teb_A 3 AMKILTVNVHAWLEENQMEKIDILARTIA---EKQYDVIAMQEVNQ 45 (266)
T ss_dssp CEEEEEEECCTTCSTTHHHHHHHHHHHHH---HHTCSEEEEEEEEE
T ss_pred ceEEEEEecccccCcchhHHHHHHHHHHH---hcCCCEEEEEEccc
Confidence 466655554332 344555666666665 45899999999865
No 37
>1wdu_A TRAS1 ORF2P; four-layered alpha/beta sandwich, RNA binding protein; 2.40A {Bombyx mori} SCOP: d.151.1.1
Probab=77.93 E-value=4 Score=26.26 Aligned_cols=39 Identities=18% Similarity=0.022 Sum_probs=24.8
Q ss_pred cEEEEEEeccccCHHHHHHHHHHHHHHHHHCCCcEEEccCCcc
Q 033342 7 VRVAVAQMTSINDLAANFATCSRLVKEAASAGAKLLCFPENFS 49 (121)
Q Consensus 7 ~~ia~vQ~~~~~~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~ 49 (121)
..+.++|.|+..... ..+.+.+. ..+.++|||++.|+..
T Consensus 18 ~~lri~s~Nv~~~~~-~~~~l~~~---i~~~~~DIv~lQE~~~ 56 (245)
T 1wdu_A 18 PPYRVLQANLQRKKL-ATAELAIE---AATRKAAIALIQEPYV 56 (245)
T ss_dssp CCEEEEEEECTTCHH-HHHHHHHH---HHHHTCSEEEEESCCC
T ss_pred cceeeeeeeccccHH-HHHHHHHH---HhhcCCCEEEEEcccc
Confidence 346677777764332 23334443 4456899999999875
No 38
>2ei9_A Non-LTR retrotransposon R1BMKS ORF2 protein; four layered alpha beta sandwich, gene regulation; 2.00A {Bombyx mori}
Probab=74.96 E-value=3.2 Score=27.11 Aligned_cols=40 Identities=15% Similarity=0.265 Sum_probs=23.8
Q ss_pred EEEEEeccccCHHHHHHHHHHHHHHHHHCCCcEEEccCCccCCC
Q 033342 9 VAVAQMTSINDLAANFATCSRLVKEAASAGAKLLCFPENFSYVG 52 (121)
Q Consensus 9 ia~vQ~~~~~~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~ 52 (121)
+.++|.|+.+-.. ..+++.+.++ +.++|+|++.|+....|
T Consensus 8 mki~s~Nvn~~r~-~~~~l~~~l~---~~~~DIl~LQEt~~~~g 47 (240)
T 2ei9_A 8 LRIGQINLGGAED-ATRELPSIAR---DLGLDIVLVQEQYSMVG 47 (240)
T ss_dssp EEEEEEECTTCHH-HHHTHHHHHH---HHTCSEEEEESCCTTSS
T ss_pred ceEEEEecCccHH-HHHHHHHHHH---HcCCCEEEeecceEcCC
Confidence 4456666643322 2334444444 56899999999964333
No 39
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=73.30 E-value=12 Score=25.65 Aligned_cols=39 Identities=8% Similarity=0.036 Sum_probs=26.6
Q ss_pred CCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 38 GAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 38 ~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
++++|+++.-..++|.. .+.+.++.+.++|+++++.++.
T Consensus 162 ~~~~v~l~~p~nptG~~----------~~~~~l~~l~~~~~~~~~~li~ 200 (390)
T 1d2f_A 162 ECKIMLLCSPQNPTGKV----------WTCDELEIMADLCERHGVRVIS 200 (390)
T ss_dssp TEEEEEEESSCTTTCCC----------CCTTHHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEEeCCCCCCCcC----------cCHHHHHHHHHHHHHcCCEEEE
Confidence 57777776544333432 2335688899999999998865
No 40
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=73.25 E-value=12 Score=26.66 Aligned_cols=71 Identities=15% Similarity=0.158 Sum_probs=45.6
Q ss_pred CHHHHHHHHHHHHHHHHHCCCcEEEc----cCCccCC-C--CCCc-----hhhhccc--CCCChHHHHHHHHHHHcCcEE
Q 033342 19 DLAANFATCSRLVKEAASAGAKLLCF----PENFSYV-G--DKDA-----DNIKIAE--PLDGPIMQGYCSLARESSMWL 84 (121)
Q Consensus 19 ~~~~n~~~~~~~~~~a~~~~~dlvv~----PE~~~~~-~--~~~~-----~~~~~~~--~~~~~~~~~l~~~a~~~~~~i 84 (121)
+-...++...++++.|++.|||.|=| |++.... . |... ...++.. ....+....|.+.|++.|+.+
T Consensus 38 NH~Gsle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~~Gi~~ 117 (385)
T 1vli_A 38 NHDGKLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCREKQVIF 117 (385)
T ss_dssp TTTTCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHHHHHHHHHHTTCEE
T ss_pred cccccHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHHHHcCCcE
Confidence 34556789999999999999999877 5553211 1 2110 0101111 246678899999999999988
Q ss_pred Eeccc
Q 033342 85 SLGGF 89 (121)
Q Consensus 85 i~G~~ 89 (121)
+..-+
T Consensus 118 ~stpf 122 (385)
T 1vli_A 118 LSTVC 122 (385)
T ss_dssp ECBCC
T ss_pred EEccC
Confidence 65533
No 41
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=73.21 E-value=12 Score=25.34 Aligned_cols=43 Identities=16% Similarity=0.272 Sum_probs=28.2
Q ss_pred HHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 34 AASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 34 a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
+...++.+|+++.-..++|.. .+.+.++.+.++|+++++.++.
T Consensus 146 ~l~~~~~~v~i~~p~nptG~~----------~~~~~l~~l~~~~~~~~~~li~ 188 (377)
T 3fdb_A 146 GFQAGARSILLCNPYNPLGMV----------FAPEWLNELCDLAHRYDARVLV 188 (377)
T ss_dssp HHHTTCCEEEEESSBTTTTBC----------CCHHHHHHHHHHHHHTTCEEEE
T ss_pred HhccCCCEEEEeCCCCCCCCC----------CCHHHHHHHHHHHHHcCCEEEE
Confidence 334457777777665544432 2334578888999999998864
No 42
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=72.97 E-value=13 Score=24.96 Aligned_cols=57 Identities=11% Similarity=0.008 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcE
Q 033342 20 LAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMW 83 (121)
Q Consensus 20 ~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ 83 (121)
.+..++.+.+.++.|..-|++.|++|-.. .....+.+.. --+.+..+.+.|+++|+.
T Consensus 103 ~~~~~~~~~~~i~~A~~lG~~~v~~~~~~--~~~~~~~~~~-----~~~~l~~l~~~a~~~Gv~ 159 (303)
T 3l23_A 103 TPKIMEYWKATAADHAKLGCKYLIQPMMP--TITTHDEAKL-----VCDIFNQASDVIKAEGIA 159 (303)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEECSCC--CCCSHHHHHH-----HHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECCCC--CCCCHHHHHH-----HHHHHHHHHHHHHHCCCc
Confidence 36678888999999999999999987321 1111111111 123566777888899987
No 43
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=72.12 E-value=8.8 Score=26.37 Aligned_cols=40 Identities=20% Similarity=0.125 Sum_probs=27.7
Q ss_pred CCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 37 AGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 37 ~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
.++.+|+++....++|.. .+.+.++.+.++|+++++.++.
T Consensus 163 ~~~~~v~~~~~~nptG~~----------~~~~~l~~i~~~~~~~~~~li~ 202 (399)
T 1c7n_A 163 KNNKALLFCSPHNPVGRV----------WKKDELQKIKDIVLKSDLMLWS 202 (399)
T ss_dssp TTEEEEEEESSBTTTTBC----------CCHHHHHHHHHHHHHSSCEEEE
T ss_pred CCCcEEEEcCCCCCCCcC----------cCHHHHHHHHHHHHHcCCEEEE
Confidence 467788887654434432 2335688899999999998865
No 44
>3mpr_A Putative endonuclease/exonuclease/phosphatase FAM protein; structural genomics, PSI-2, protein structure initiative; HET: MSE PEG; 1.90A {Bacteroides thetaiotaomicron}
Probab=71.79 E-value=13 Score=24.57 Aligned_cols=21 Identities=10% Similarity=0.090 Sum_probs=14.7
Q ss_pred HHHHHHHHHCCCcEEEccCCc
Q 033342 28 SRLVKEAASAGAKLLCFPENF 48 (121)
Q Consensus 28 ~~~~~~a~~~~~dlvv~PE~~ 48 (121)
...++.....++|||++.|..
T Consensus 33 ~~i~~~i~~~~~DIv~LQEv~ 53 (298)
T 3mpr_A 33 PVIAQMVQYHDFDIFGTQECF 53 (298)
T ss_dssp HHHHHHHHHTTCSEEEEESBC
T ss_pred HHHHHHHHHcCCCEEEEeCCC
Confidence 333333345699999999986
No 45
>4gew_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; 2.35A {Caenorhabditis elegans} PDB: 4f1i_A
Probab=71.33 E-value=4.6 Score=28.09 Aligned_cols=40 Identities=18% Similarity=0.262 Sum_probs=24.9
Q ss_pred ccEEEEEEecccc----CHHHHHHHHHHHHHHHHHCCCcEEEccCCc
Q 033342 6 SVRVAVAQMTSIN----DLAANFATCSRLVKEAASAGAKLLCFPENF 48 (121)
Q Consensus 6 ~~~ia~vQ~~~~~----~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~ 48 (121)
..++.++-.|+.+ +.....+.+.+.++ ..++|||+|.|..
T Consensus 117 ~~~lkVlSWNI~Gl~~~~~~~R~~~I~~~I~---~~~PDIV~LQEv~ 160 (362)
T 4gew_A 117 GFEVSVMSWNIDGLDGRSLLTRMKAVAHIVK---NVNPDILFLQEVV 160 (362)
T ss_dssp TCEEEEEEEECCTTCCTTHHHHHHHHHHHHH---HHCCSEEEEEEEC
T ss_pred CCeEEEEEEEeCCCCCcCHHHHHHHHHHHHH---HcCCCEEEEEcCC
Confidence 4555666666642 34444444555554 5689999999974
No 46
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=71.11 E-value=19 Score=23.47 Aligned_cols=62 Identities=5% Similarity=-0.196 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 20 LAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 20 ~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
.+..++.+.+.++.|..-|++.|++.=. .+.+...++... .-.+.+..+.+.|+++|+.+.+
T Consensus 88 r~~~~~~~~~~i~~A~~lGa~~v~~~~g-~~~~~~~~~~~~----~~~~~l~~l~~~a~~~Gv~l~l 149 (269)
T 3ngf_A 88 EQEFRDNVDIALHYALALDCRTLHAMSG-ITEGLDRKACEE----TFIENFRYAADKLAPHGITVLV 149 (269)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEECCBC-BCTTSCHHHHHH----HHHHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEccC-CCCCCCHHHHHH----HHHHHHHHHHHHHHHcCCEEEE
Confidence 5667888999999999999998876322 211211111100 1123566677778888987754
No 47
>4gz1_A Tyrosyl-DNA phosphodiesterase 2; protein-DNA complex, DNA repair, 5'-DNA END processing, endonuclease/exonuclease/phosphatase domain; HET: DNA EPE; 1.50A {Mus musculus} PDB: 4gyz_A* 4gz0_A* 4gz2_A*
Probab=70.94 E-value=4.5 Score=25.64 Aligned_cols=41 Identities=5% Similarity=0.092 Sum_probs=24.2
Q ss_pred cccEEEEEEeccc--cCHHHHHHHHHHHHHHHHHCCCcEEEccCCc
Q 033342 5 HSVRVAVAQMTSI--NDLAANFATCSRLVKEAASAGAKLLCFPENF 48 (121)
Q Consensus 5 ~~~~ia~vQ~~~~--~~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~ 48 (121)
+++||.....+.. .+.....+.+.+.++ +.++|||++.|..
T Consensus 8 ~~l~v~swNi~g~~~~~~~~r~~~i~~~i~---~~~pDIi~LQEv~ 50 (256)
T 4gz1_A 8 STISFITWNIDGLDGCNLPERARGVCSCLA---LYSPDVVFLQEVI 50 (256)
T ss_dssp GEEEEEEEECCTTCCTTHHHHHHHHHHHHH---HHCCSEEEEEEEC
T ss_pred CcEEEEEEEcCCCcCcCHHHHHHHHHHHHH---HcCCCEEEEEcCC
Confidence 3455555544322 234444555555554 4589999999964
No 48
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=70.71 E-value=4.3 Score=26.49 Aligned_cols=45 Identities=18% Similarity=0.146 Sum_probs=26.3
Q ss_pred hHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEeee
Q 033342 68 PIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~~y 116 (121)
.+.+.+.+++++.+..+++-+.... .. .+-+..+++. +|+++...
T Consensus 183 ~i~~~l~~l~~~~g~tvi~vtHd~~--~~-~~~d~i~~l~-~G~i~~~~ 227 (235)
T 3tif_A 183 KIMQLLKKLNEEDGKTVVVVTHDIN--VA-RFGERIIYLK-DGEVEREE 227 (235)
T ss_dssp HHHHHHHHHHHHHCCEEEEECSCHH--HH-TTSSEEEEEE-TTEEEEEE
T ss_pred HHHHHHHHHHHHcCCEEEEEcCCHH--HH-HhCCEEEEEE-CCEEEEEc
Confidence 4556667777666776665543321 11 3456677776 78886543
No 49
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=70.61 E-value=20 Score=23.61 Aligned_cols=60 Identities=8% Similarity=0.170 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEccCCccC-CCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEE
Q 033342 21 AANFATCSRLVKEAASAGAKLLCFPENFSY-VGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLS 85 (121)
Q Consensus 21 ~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii 85 (121)
+..++.+.+.++.|..-|++.|+++ .... .+...++... .-.+.+..+.+.|+++|+.+.
T Consensus 104 ~~~~~~~~~~i~~A~~lG~~~v~~~-~~~~~~~~~~~~~~~----~~~~~l~~l~~~a~~~Gv~l~ 164 (295)
T 3cqj_A 104 AQGLEIMRKAIQFAQDVGIRVIQLA-GYDVYYQEANNETRR----RFRDGLKESVEMASRAQVTLA 164 (295)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEC-CCSCSSSCCCHHHHH----HHHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEC-CCCCCcCcCHHHHHH----HHHHHHHHHHHHHHHhCCEEE
Confidence 4567888888888888899999987 2210 0111111000 112345666777788888764
No 50
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=68.92 E-value=17 Score=24.89 Aligned_cols=40 Identities=18% Similarity=0.161 Sum_probs=25.6
Q ss_pred CCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 37 AGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 37 ~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
.++.+|++..-..++|.. .+.+.++.+.++|+++++.++.
T Consensus 178 ~~~~~v~~~~p~nptG~~----------~~~~~l~~i~~~~~~~~~~li~ 217 (407)
T 3nra_A 178 AGARVFLFSNPNNPAGVV----------YSAEEIGQIAALAARYGATVIA 217 (407)
T ss_dssp TTCCEEEEESSCTTTCCC----------CCHHHHHHHHHHHHHHTCEEEE
T ss_pred hCCcEEEEcCCCCCCCcc----------cCHHHHHHHHHHHHHcCCEEEE
Confidence 366666654434334432 2334578899999999998865
No 51
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=68.16 E-value=15 Score=24.90 Aligned_cols=41 Identities=15% Similarity=0.165 Sum_probs=26.9
Q ss_pred HCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 36 SAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 36 ~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
..++++|+++....++|.. .+.+.++.+.++|+++++.++.
T Consensus 154 ~~~~~~v~i~~p~nptG~~----------~~~~~l~~l~~~~~~~~~~li~ 194 (383)
T 3kax_A 154 QQGVKLMLLCSPHNPIGRV----------WKKEELTKLGSLCTKYNVIVVA 194 (383)
T ss_dssp TTTCCEEEEESSBTTTTBC----------CCHHHHHHHHHHHHHHTCEEEE
T ss_pred CcCCeEEEEeCCCCCCCcC----------cCHHHHHHHHHHHHHCCCEEEE
Confidence 4567777775544433432 2334578888899999998865
No 52
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=67.66 E-value=23 Score=23.13 Aligned_cols=74 Identities=11% Similarity=0.107 Sum_probs=43.9
Q ss_pred ccEEEEEEecc----ccCHHHHHHHHHHHHHHHHHCCCcEEEc-cCCccCCCCCCc-hhhhcccCCCChHHHHHHHHHHH
Q 033342 6 SVRVAVAQMTS----INDLAANFATCSRLVKEAASAGAKLLCF-PENFSYVGDKDA-DNIKIAEPLDGPIMQGYCSLARE 79 (121)
Q Consensus 6 ~~~ia~vQ~~~----~~~~~~n~~~~~~~~~~a~~~~~dlvv~-PE~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~a~~ 79 (121)
-+++..+.... ....+..++.+.+.++.|..-|++.|++ |=... .+...+ .+. .--+.+..+.+.|++
T Consensus 61 gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~-~~~~~~~~~~-----~~~~~l~~l~~~a~~ 134 (286)
T 3dx5_A 61 TLEITMISDYLDISLSADFEKTIEKCEQLAILANWFKTNKIRTFAGQKG-SADFSQQERQ-----EYVNRIRMICELFAQ 134 (286)
T ss_dssp TCCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHHHHTCCEEEECSCSSC-GGGSCHHHHH-----HHHHHHHHHHHHHHH
T ss_pred CCeEEEEecCCCCCCchhHHHHHHHHHHHHHHHHHhCCCEEEEcCCCCC-cccCcHHHHH-----HHHHHHHHHHHHHHH
Confidence 36666665432 2456778889999999999999998854 32211 111111 011 112345667777888
Q ss_pred cCcEEE
Q 033342 80 SSMWLS 85 (121)
Q Consensus 80 ~~~~ii 85 (121)
+|+.+.
T Consensus 135 ~Gv~l~ 140 (286)
T 3dx5_A 135 HNMYVL 140 (286)
T ss_dssp TTCEEE
T ss_pred hCCEEE
Confidence 888764
No 53
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=65.82 E-value=8.1 Score=29.21 Aligned_cols=72 Identities=7% Similarity=-0.025 Sum_probs=39.4
Q ss_pred HHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecCCCCceEEE-EEEECCC
Q 033342 31 VKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNT-HVLLDDA 109 (121)
Q Consensus 31 ~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns-~~~i~~~ 109 (121)
.+.++..|||+|+.|=.+. ..... .......++.-|.+++++++.-...-. ..++..|.. +++. |+
T Consensus 175 ~r~la~~GAdii~~psas~-~~~gk----------~~~~~~l~~~rA~e~~~~vv~aN~~G~-~~~~~~f~G~S~I~-p~ 241 (634)
T 3ilv_A 175 GIRHYEKGATLVLNPSASH-FAFGK----------SAIRYDLVIGGSERFDCTYVYANLLGN-EAGRMIYDGEVLIA-HK 241 (634)
T ss_dssp ---CGGGTCSEEEEEECCB-CCTTH----------HHHHHHHHHHHHHHTTSEEEEEECEEE-SSSSCEEECCEEEE-ET
T ss_pred HHHHHHCCCcEEEEecCCc-cccCc----------HHHHHHHHHHHHHHhCCEEEEEcCccC-CCCceEEcceEEEE-cC
Confidence 3444567999999997664 11110 012234466778899999875433221 112334433 3444 89
Q ss_pred CCEEee
Q 033342 110 GNIRST 115 (121)
Q Consensus 110 G~i~~~ 115 (121)
|+++..
T Consensus 242 G~vla~ 247 (634)
T 3ilv_A 242 GKLIQR 247 (634)
T ss_dssp TEEEEE
T ss_pred CeEEEE
Confidence 998764
No 54
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=65.49 E-value=15 Score=24.98 Aligned_cols=40 Identities=10% Similarity=0.179 Sum_probs=26.3
Q ss_pred CCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 37 AGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 37 ~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
.++++|+++....++|.. .+...++.+.++|+++++.++.
T Consensus 159 ~~~~~v~i~~p~nptG~~----------~~~~~l~~i~~~~~~~~~~li~ 198 (391)
T 3dzz_A 159 PSVRMMVFCNPHNPIGYA----------WSEEEVKRIAELCAKHQVLLIS 198 (391)
T ss_dssp TTEEEEEEESSBTTTTBC----------CCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCceEEEEECCCCCCCcc----------cCHHHHHHHHHHHHHCCCEEEE
Confidence 467777765544433432 1234578899999999998864
No 55
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=64.15 E-value=16 Score=24.01 Aligned_cols=67 Identities=13% Similarity=0.116 Sum_probs=36.7
Q ss_pred HHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEE
Q 033342 34 AASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIR 113 (121)
Q Consensus 34 a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~ 113 (121)
|...+++++++=|=+. +-+.. ......+.+.+++++ +..+++-+.... .-..+-+..+++. +|+++
T Consensus 167 aL~~~p~lllLDEPts--~LD~~--------~~~~l~~~l~~l~~~-g~tvi~vtHd~~--~~~~~~d~v~~l~-~G~i~ 232 (257)
T 1g6h_A 167 ALMTNPKMIVMDEPIA--GVAPG--------LAHDIFNHVLELKAK-GITFLIIEHRLD--IVLNYIDHLYVMF-NGQII 232 (257)
T ss_dssp HHHTCCSEEEEESTTT--TCCHH--------HHHHHHHHHHHHHHT-TCEEEEECSCCS--TTGGGCSEEEEEE-TTEEE
T ss_pred HHHcCCCEEEEeCCcc--CCCHH--------HHHHHHHHHHHHHHC-CCEEEEEecCHH--HHHHhCCEEEEEE-CCEEE
Confidence 4456788888888654 21111 122345556666554 666665543321 2224556777776 78875
Q ss_pred e
Q 033342 114 S 114 (121)
Q Consensus 114 ~ 114 (121)
.
T Consensus 233 ~ 233 (257)
T 1g6h_A 233 A 233 (257)
T ss_dssp E
T ss_pred E
Confidence 4
No 56
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=63.76 E-value=28 Score=22.78 Aligned_cols=61 Identities=15% Similarity=0.077 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 20 LAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 20 ~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
.+..++.+.+.++.|..-|++.|++.=... +....+.+.. -.+.+..+.+.|+++|+.+.+
T Consensus 97 r~~~~~~~~~~i~~a~~lG~~~v~~~~G~~-~~~~~~~~~~-----~~~~l~~l~~~a~~~Gv~l~l 157 (290)
T 3tva_A 97 RASRVAEMKEISDFASWVGCPAIGLHIGFV-PESSSPDYSE-----LVRVTQDLLTHAANHGQAVHL 157 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEECCCCC-CCTTSHHHHH-----HHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcCCCC-cccchHHHHH-----HHHHHHHHHHHHHHcCCEEEE
Confidence 566788899999999889999888632222 1111111111 123456667777888887643
No 57
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=63.42 E-value=26 Score=22.39 Aligned_cols=63 Identities=5% Similarity=-0.112 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 20 LAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 20 ~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
.+..++.+.+.++.|..-|++.|++.=...+.+...++... .-.+.+..+.+.|+++|+.+.+
T Consensus 80 ~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~----~~~~~l~~l~~~a~~~gv~l~~ 142 (260)
T 1k77_A 80 EHEAHADIDLALEYALALNCEQVHVMAGVVPAGEDAERYRA----VFIDNIRYAADRFAPHGKRILV 142 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEECCCCBCCTTSCHHHHHH----HHHHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECcCCCCCCCCHHHHHH----HHHHHHHHHHHHHHHcCCEEEE
Confidence 46678889999999999999988773111101111111000 1123556667777888887754
No 58
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=63.35 E-value=28 Score=22.73 Aligned_cols=62 Identities=8% Similarity=0.033 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEccCCccCCC--C-CCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 21 AANFATCSRLVKEAASAGAKLLCFPENFSYVG--D-KDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 21 ~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~--~-~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
+..++.+.+.++.|..-|++.|+++=.+.... . ..++... ...+.+..+.+.|+++|+.+.+
T Consensus 100 ~~~~~~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~----~~~~~l~~l~~~a~~~Gv~l~l 164 (287)
T 3kws_A 100 KECMDTMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRD----FLCEQFNEMGTFAAQHGTSVIF 164 (287)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHH----HHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHH----HHHHHHHHHHHHHHHcCCEEEE
Confidence 56778888999999999999887753221010 0 1111000 1124566677788888886643
No 59
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=63.09 E-value=17 Score=20.72 Aligned_cols=42 Identities=12% Similarity=0.007 Sum_probs=26.2
Q ss_pred HHHHHHHHHHcCcE-EEeccceeecCCCCceEEEEEEECCCCCEEeeee
Q 033342 70 MQGYCSLARESSMW-LSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYR 117 (121)
Q Consensus 70 ~~~l~~~a~~~~~~-ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~~y~ 117 (121)
++...+-+++.|+. ++.+ ... ...| .. +++.+|+|..+..+.
T Consensus 77 vd~~~~~l~~~G~~~~~~~-p~~--~~~G-~~--~~~~DPdGn~iel~~ 119 (128)
T 3g12_A 77 LEKTVQELVKIPGAMCILD-PTD--MPDG-KK--AIVLDPDGHSIELCE 119 (128)
T ss_dssp HHHHHHHHTTSTTCEEEEE-EEE--CC-C-EE--EEEECTTCCEEEEEC
T ss_pred HHHHHHHHHHCCCceeccC-cee--CCCc-cE--EEEECCCCCEEEEEE
Confidence 56666667778887 5443 222 1233 23 899999998876543
No 60
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=62.98 E-value=11 Score=26.05 Aligned_cols=41 Identities=5% Similarity=0.049 Sum_probs=27.8
Q ss_pred HCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 36 SAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 36 ~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
..++.+|+++....++|.. .+.+.++.+.++|+++++.++.
T Consensus 170 ~~~~~~v~l~~p~nptG~~----------~~~~~l~~l~~~~~~~~~~li~ 210 (412)
T 2x5d_A 170 IPKPRMMILGFPSNPTAQC----------VELDFFERVVALAKQYDVMVVH 210 (412)
T ss_dssp ESCCSEEEEESSCTTTCCC----------CCHHHHHHHHHHHHHHTCEEEE
T ss_pred ccCceEEEECCCCCCCCCc----------CCHHHHHHHHHHHHHcCCEEEE
Confidence 3567888886544434432 2235678899999999998865
No 61
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=62.90 E-value=17 Score=22.66 Aligned_cols=65 Identities=6% Similarity=-0.077 Sum_probs=33.2
Q ss_pred CHHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCc-hhhhcccCCCChHHHHHHHHHHHcCcEEE
Q 033342 19 DLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDA-DNIKIAEPLDGPIMQGYCSLARESSMWLS 85 (121)
Q Consensus 19 ~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~a~~~~~~ii 85 (121)
+.+...+.+..+++.+...++.+++..=.-. ..+... ..... ...-..+-+.+.++|+++++.++
T Consensus 99 ~~~~~~~~l~~ii~~~~~~~~~iil~~~~P~-~~~~~~~~~~~~-~~~i~~~n~~i~~~a~~~~v~~i 164 (209)
T 4hf7_A 99 NEDYTFGNIASMAELAKANKIKVILTSVLPA-AEFPWRREIKDA-PQKIQSLNARIEAYAKANKIPFV 164 (209)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEECCCCC-SCCTTCTTCCCH-HHHHHHHHHHHHHHHHHTTCCEE
T ss_pred cHHHHHHHHHHhhHHHhccCceEEEEeeecc-Ccccccccccch-hHHHHHHHHHHHHHHHhcCCeEe
Confidence 4455566677777777678888877521100 001000 00000 00012345667888999888664
No 62
>2o3h_A DNA-(apurinic or apyrimidinic site) lyase; APE, endonuclease; 1.90A {Homo sapiens} PDB: 1bix_A 1dew_A* 1de8_B* 1de9_A* 2o3c_A
Probab=62.11 E-value=12 Score=24.49 Aligned_cols=39 Identities=15% Similarity=0.151 Sum_probs=22.8
Q ss_pred cEEEEEEeccccCHHHHHHH-HHHHHHHHHHCCCcEEEccCCcc
Q 033342 7 VRVAVAQMTSINDLAANFAT-CSRLVKEAASAGAKLLCFPENFS 49 (121)
Q Consensus 7 ~~ia~vQ~~~~~~~~~n~~~-~~~~~~~a~~~~~dlvv~PE~~~ 49 (121)
..+.++..|+.+. ....++ +.+.+ .+.++|||++.|+..
T Consensus 27 ~~l~v~t~Ni~~~-~~~~~~~i~~~i---~~~~~DIi~LQE~~~ 66 (285)
T 2o3h_A 27 ATLKIASWNVDGL-RAWIKKKGLDWV---KEEAPDILCLQETKC 66 (285)
T ss_dssp CCEEEEEEECSSH-HHHHHTTHHHHH---HHHCCSEEEEECCCC
T ss_pred cceEEEEEecccC-hhhhhhhHHHHH---HhcCCCEEEEEEeec
Confidence 3455566666421 112222 44444 356899999999876
No 63
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=62.01 E-value=16 Score=24.78 Aligned_cols=21 Identities=14% Similarity=0.271 Sum_probs=16.8
Q ss_pred CChHHHHHHHHHHHcCcEEEe
Q 033342 66 DGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 66 ~~~~~~~l~~~a~~~~~~ii~ 86 (121)
+.+.++.+.++|+++++.++.
T Consensus 172 ~~~~l~~i~~la~~~~~~li~ 192 (375)
T 3op7_A 172 DRTYLEELVEIASEVGAYILS 192 (375)
T ss_dssp CHHHHHHHHHHHHTTTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEE
Confidence 345588899999999998864
No 64
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=61.82 E-value=28 Score=24.13 Aligned_cols=41 Identities=5% Similarity=-0.066 Sum_probs=26.3
Q ss_pred HCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 36 SAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 36 ~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
..++++|++..-..++|.. .+.+.++.+.++|+++++.++.
T Consensus 180 ~~~~~~v~l~~p~nptG~~----------~~~~~l~~i~~~a~~~~~~li~ 220 (437)
T 3g0t_A 180 TGQFCSIIYSNPNNPTWQC----------MTDEELRIIGELATKHDVIVIE 220 (437)
T ss_dssp TTCCCEEEEESSCTTTCCC----------CCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCceEEEEeCCCCCCCCc----------CCHHHHHHHHHHHHHCCcEEEE
Confidence 4567777654333334432 2234578899999999998875
No 65
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=61.78 E-value=29 Score=22.33 Aligned_cols=75 Identities=7% Similarity=0.014 Sum_probs=40.1
Q ss_pred cEEEEEEec--cc-cC---HHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHc
Q 033342 7 VRVAVAQMT--SI-ND---LAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARES 80 (121)
Q Consensus 7 ~~ia~vQ~~--~~-~~---~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~ 80 (121)
+++..+... .. .+ .+..++.+.+.++.|..-|++.|++.=.....+...++... ...+.+..+.+.|+++
T Consensus 60 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~----~~~~~l~~l~~~a~~~ 135 (278)
T 1i60_A 60 IKPLALNALVFFNNRDEKGHNEIITEFKGMMETCKTLGVKYVVAVPLVTEQKIVKEEIKK----SSVDVLTELSDIAEPY 135 (278)
T ss_dssp CEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCBCSSCCCHHHHHH----HHHHHHHHHHHHHGGG
T ss_pred CCeeeeccccccccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHH----HHHHHHHHHHHHHHhc
Confidence 566555543 22 23 34567888888888888899988772111101111111000 1123455566677777
Q ss_pred CcEEE
Q 033342 81 SMWLS 85 (121)
Q Consensus 81 ~~~ii 85 (121)
|+.+.
T Consensus 136 gv~l~ 140 (278)
T 1i60_A 136 GVKIA 140 (278)
T ss_dssp TCEEE
T ss_pred CCEEE
Confidence 87663
No 66
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=61.55 E-value=7.4 Score=26.73 Aligned_cols=22 Identities=23% Similarity=0.522 Sum_probs=18.0
Q ss_pred eEEEEEEECCCCCEEeeeecCC
Q 033342 99 LCNTHVLLDDAGNIRSTYRKIH 120 (121)
Q Consensus 99 ~~Ns~~~i~~~G~i~~~y~K~h 120 (121)
.+=++++|+++|.|...|+|+.
T Consensus 101 ~~r~tfiId~~G~i~~~~~~v~ 122 (322)
T 4eo3_A 101 TVRSTFLIDRWGFVRKEWRRVK 122 (322)
T ss_dssp ECCEEEEECTTSBEEEEEESCC
T ss_pred CccEEEEECCCCEEEEEEeCCC
Confidence 3447899999999998898764
No 67
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=61.52 E-value=20 Score=24.30 Aligned_cols=32 Identities=16% Similarity=0.007 Sum_probs=26.7
Q ss_pred ccCHHHHHHHHHHHHHHHHHCCCcEEEccCCc
Q 033342 17 INDLAANFATCSRLVKEAASAGAKLLCFPENF 48 (121)
Q Consensus 17 ~~~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~ 48 (121)
..+.+++++.+.+.++.|.+.+.++.+.||.+
T Consensus 113 ~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~ 144 (293)
T 3ewb_X 113 KMSRAEVLASIKHHISYARQKFDVVQFSPEDA 144 (293)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCSCEEEEEETG
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCEEEEEeccC
Confidence 35688899999999999998898888878754
No 68
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=61.25 E-value=12 Score=25.63 Aligned_cols=40 Identities=13% Similarity=0.111 Sum_probs=26.5
Q ss_pred CCCcEE-EccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 37 AGAKLL-CFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 37 ~~~dlv-v~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
.++++| ++|....++|.. .+.+.++.+.++|+++++.++.
T Consensus 161 ~~~~~v~~~~~~~nptG~~----------~~~~~l~~l~~~~~~~~~~li~ 201 (397)
T 2zyj_A 161 ERPRFLYLIPSFQNPTGGL----------TPLPARKRLLQMVMERGLVVVE 201 (397)
T ss_dssp CCCSCEEECCBSCTTTCCB----------CCHHHHHHHHHHHHHHTCCEEE
T ss_pred cCCeEEEECCCCcCCCCCc----------CCHHHHHHHHHHHHHcCCEEEE
Confidence 367776 577765544532 2334577888899999887764
No 69
>3g91_A MTH0212, exodeoxyribonuclease; double-strand specific 3'-5' exonuclease, AP endonuclease; HET: PG4; 1.23A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fzi_A 3g0a_A 3g1k_A 3g2c_A 3g3c_A* 3g3y_A* 3g4t_A* 3g00_A 3g0r_A* 3g2d_A* 3g38_A 3g8v_A* 3ga6_A
Probab=61.06 E-value=15 Score=23.79 Aligned_cols=16 Identities=19% Similarity=0.326 Sum_probs=12.8
Q ss_pred HHHCCCcEEEccCCcc
Q 033342 34 AASAGAKLLCFPENFS 49 (121)
Q Consensus 34 a~~~~~dlvv~PE~~~ 49 (121)
....++|||++.|+..
T Consensus 26 i~~~~~DIv~LQEt~~ 41 (265)
T 3g91_A 26 FMEEKPDILCLQEIKA 41 (265)
T ss_dssp HHHHCCSEEEEECCCS
T ss_pred HHhcCCCEEEEEeccc
Confidence 3456999999999864
No 70
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=60.85 E-value=15 Score=24.54 Aligned_cols=66 Identities=14% Similarity=0.149 Sum_probs=34.9
Q ss_pred HCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEe
Q 033342 36 SAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRS 114 (121)
Q Consensus 36 ~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~ 114 (121)
..+++++++=|=+. +-+. .....+.+.+.++.++.+..+++-+-... .-..+-...+++. +|+++.
T Consensus 159 ~~~P~lLlLDEPts--~LD~--------~~~~~i~~~l~~l~~~~g~tvi~vtHdl~--~~~~~~drv~~l~-~G~i~~ 224 (275)
T 3gfo_A 159 VMEPKVLILDEPTA--GLDP--------MGVSEIMKLLVEMQKELGITIIIATHDID--IVPLYCDNVFVMK-EGRVIL 224 (275)
T ss_dssp TTCCSEEEEECTTT--TCCH--------HHHHHHHHHHHHHHHHHCCEEEEEESCCS--SGGGGCSEEEEEE-TTEEEE
T ss_pred HcCCCEEEEECccc--cCCH--------HHHHHHHHHHHHHHhhCCCEEEEEecCHH--HHHHhCCEEEEEE-CCEEEE
Confidence 34677777777553 1111 01124556666776344766665533221 2123456677776 788764
No 71
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=60.71 E-value=31 Score=23.99 Aligned_cols=39 Identities=8% Similarity=0.092 Sum_probs=26.4
Q ss_pred CCcEE-EccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 38 GAKLL-CFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 38 ~~dlv-v~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
++++| +.|-...++|.. .+.+.++.+.++|+++++.++.
T Consensus 187 ~~~~v~~~~~~~nptG~~----------~~~~~l~~l~~~~~~~~~~li~ 226 (425)
T 1vp4_A 187 QVKFIYVVSNFHNPAGVT----------TSLEKRKALVEIAEKYDLFIVE 226 (425)
T ss_dssp GEEEEEEECSSCTTTCCC----------CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CceEEEECCCCCCCCCCc----------CCHHHHHHHHHHHHHcCCEEEE
Confidence 56777 567755544532 2234678899999999988864
No 72
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=60.09 E-value=13 Score=24.41 Aligned_cols=18 Identities=28% Similarity=0.340 Sum_probs=12.3
Q ss_pred HHHHHHHHCCCcEEEccC
Q 033342 29 RLVKEAASAGAKLLCFPE 46 (121)
Q Consensus 29 ~~~~~a~~~~~dlvv~PE 46 (121)
+..+.|.+.|+|+|+.|-
T Consensus 97 ~~a~~Ai~AGA~fIvsP~ 114 (232)
T 4e38_A 97 EQALAAKEAGATFVVSPG 114 (232)
T ss_dssp HHHHHHHHHTCSEEECSS
T ss_pred HHHHHHHHcCCCEEEeCC
Confidence 344556677888888774
No 73
>1hd7_A DNA-(apurinic or apyrimidinic site) lyase; DNA repair, endonuclease, APE1, HAP1, REF-1; 1.95A {Homo sapiens} SCOP: d.151.1.1 PDB: 1e9n_A 3u8u_A 2isi_A
Probab=59.97 E-value=13 Score=24.99 Aligned_cols=39 Identities=13% Similarity=0.121 Sum_probs=23.0
Q ss_pred cEEEEEEeccccCHHHHHHH-HHHHHHHHHHCCCcEEEccCCcc
Q 033342 7 VRVAVAQMTSINDLAANFAT-CSRLVKEAASAGAKLLCFPENFS 49 (121)
Q Consensus 7 ~~ia~vQ~~~~~~~~~n~~~-~~~~~~~a~~~~~dlvv~PE~~~ 49 (121)
..+.+++.|+.+... ..++ +.+.+ ...++|||++.|+..
T Consensus 60 ~~lrv~t~Nv~g~~~-~~~~~i~~~i---~~~~~DIi~LQE~~~ 99 (318)
T 1hd7_A 60 ATLKICSWNVDGLRA-WIKKKGLDWV---KEEAPDILCLQETKC 99 (318)
T ss_dssp CCEEEEEEECSSHHH-HHHTTHHHHH---HHHCCSEEEEECCCC
T ss_pred CceEEEEEecCcchh-hhhhhHHHHH---HhhCCCEEEEEEccC
Confidence 445566666653211 1222 44444 356899999999875
No 74
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=59.69 E-value=19 Score=21.40 Aligned_cols=15 Identities=20% Similarity=0.578 Sum_probs=11.8
Q ss_pred EEEEECCCCCEEeee
Q 033342 102 THVLLDDAGNIRSTY 116 (121)
Q Consensus 102 s~~~i~~~G~i~~~y 116 (121)
+.++|+++|.+...+
T Consensus 121 ~tflID~~G~I~~~~ 135 (157)
T 4g2e_A 121 AVFVIDKEGKVRYKW 135 (157)
T ss_dssp EEEEECTTSBEEEEE
T ss_pred eEEEECCCCEEEEEE
Confidence 579999999986543
No 75
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=58.99 E-value=44 Score=23.71 Aligned_cols=59 Identities=8% Similarity=-0.055 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHCCCcEEEccCCccC-CCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEecc
Q 033342 23 NFATCSRLVKEAASAGAKLLCFPENFSY-VGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGG 88 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlvv~PE~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~ 88 (121)
..+...+.++.+++.|+|+|.|-=+-.. ..+. +. ....+.+..|.+.+++.|+.++.-.
T Consensus 154 s~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~------f~-gl~~egl~~L~~~~~~~Gl~~~te~ 213 (385)
T 3nvt_A 154 SYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYD------FQ-GLGLEGLKILKRVSDEYGLGVISEI 213 (385)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTS------CC-CCTHHHHHHHHHHHHHHTCEEEEEC
T ss_pred CHHHHHHHHHHHHHcCCCeEEcccccCCCChHh------hc-CCCHHHHHHHHHHHHHcCCEEEEec
Confidence 5667888888888899999877532210 0111 11 1233667888899999999887653
No 76
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=58.59 E-value=9.4 Score=23.26 Aligned_cols=18 Identities=22% Similarity=0.527 Sum_probs=15.3
Q ss_pred EEEEEECCCCCEEeeeec
Q 033342 101 NTHVLLDDAGNIRSTYRK 118 (121)
Q Consensus 101 Ns~~~i~~~G~i~~~y~K 118 (121)
.+.++|+|+|+++..|..
T Consensus 135 ~~~~liD~~G~i~~~~~g 152 (170)
T 4hde_A 135 TSFYLIDQNGKVMKKYSG 152 (170)
T ss_dssp CEEEEECTTSCEEEEEES
T ss_pred eEEEEEcCCCeEEEEECC
Confidence 467999999999988864
No 77
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C
Probab=58.41 E-value=4.8 Score=28.39 Aligned_cols=65 Identities=14% Similarity=0.186 Sum_probs=36.3
Q ss_pred CCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEe
Q 033342 37 AGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRS 114 (121)
Q Consensus 37 ~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~ 114 (121)
.+++++++=|-+. +-+ ......+.+.+.++.++.++.|++-+-.-. .-..+-+..+++. +|+++.
T Consensus 180 ~~P~lLLlDEPTs--~LD--------~~~~~~i~~lL~~l~~~~g~Tii~vTHdl~--~~~~~aDrv~vl~-~G~iv~ 244 (366)
T 3tui_C 180 SNPKVLLCDQATS--ALD--------PATTRSILELLKDINRRLGLTILLITHEMD--VVKRICDCVAVIS-NGELIE 244 (366)
T ss_dssp TCCSEEEEESTTT--TSC--------HHHHHHHHHHHHHHHHHSCCEEEEEESCHH--HHHHHCSEEEEEE-TTEEEE
T ss_pred cCCCEEEEECCCc--cCC--------HHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHHhCCEEEEEE-CCEEEE
Confidence 4677777777554 111 111234566677777787888876643210 1113456667775 687754
No 78
>4a74_A DNA repair and recombination protein RADA; hydrolase, recombinase; HET: DNA ANP; 1.48A {Pyrococcus furiosus} PDB: 4a6x_A* 4a6p_A* 4a7o_A*
Probab=58.19 E-value=27 Score=21.74 Aligned_cols=54 Identities=15% Similarity=-0.027 Sum_probs=28.5
Q ss_pred HCCCcEEEccCCccCCCCCCchhhhcccC--CCChHHHHHHHHHHHcCcEEEeccc
Q 033342 36 SAGAKLLCFPENFSYVGDKDADNIKIAEP--LDGPIMQGYCSLARESSMWLSLGGF 89 (121)
Q Consensus 36 ~~~~dlvv~PE~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~a~~~~~~ii~G~~ 89 (121)
..+++++++=|...........-....+. ........+.++++++++.+++-+-
T Consensus 123 ~~~~~llilDe~~~~l~~~~~~~~~~~~r~~~~~~~~~~l~~~~~~~g~tvi~vtH 178 (231)
T 4a74_A 123 DRPVKLLIVDSLTSHFRSEYIGRGALAERQQKLAKHLADLHRLANLYDIAVFVTNQ 178 (231)
T ss_dssp SSCEEEEEEETSSHHHHHHSCSTTHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred CCceeEEEECChHHHhccccCCCcchhHHHHHHHHHHHHHHHHHHHCCCeEEEEee
Confidence 45789999988764100000000000000 0114667788888888888876643
No 79
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=57.95 E-value=34 Score=23.69 Aligned_cols=53 Identities=15% Similarity=0.169 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHC--CCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 24 FATCSRLVKEAASA--GAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 24 ~~~~~~~~~~a~~~--~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
.+.+++.++..... ++.+|+++.-..++|.. .+.+.++.+.++|+++++.++.
T Consensus 172 ~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~----------~~~~~l~~l~~~~~~~~~~li~ 226 (428)
T 1iay_A 172 SKAVKEAYENAQKSNIKVKGLILTNPSNPLGTT----------LDKDTLKSVLSFTNQHNIHLVC 226 (428)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCC----------CCHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCc----------CCHHHHHHHHHHHHHCCeEEEE
Confidence 44555555443222 46777776654434532 2345678888899999887764
No 80
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=57.74 E-value=24 Score=24.51 Aligned_cols=40 Identities=13% Similarity=0.093 Sum_probs=26.2
Q ss_pred CCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 37 AGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 37 ~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
.++.+|+++--..++|.. .+.+.++.+.++|+++++.++.
T Consensus 193 ~~~~~vil~~p~nptG~~----------~~~~~l~~l~~l~~~~~~~li~ 232 (421)
T 3l8a_A 193 NNVKIYLLCSPHNPGGRV----------WDNDDLIKIAELCKKHGVILVS 232 (421)
T ss_dssp TTEEEEEEESSBTTTTBC----------CCHHHHHHHHHHHHHHTCEEEE
T ss_pred cCCeEEEECCCCCCCCCc----------CCHHHHHHHHHHHHHcCCEEEE
Confidence 567777774433333321 2334588999999999998864
No 81
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=57.65 E-value=30 Score=21.10 Aligned_cols=61 Identities=8% Similarity=0.031 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEE
Q 033342 20 LAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLS 85 (121)
Q Consensus 20 ~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii 85 (121)
.+...+.+.++++.+.+.++.+|+..-...+..... .+ ......+-+.+.++|+++++.++
T Consensus 112 ~~~~~~~l~~~i~~~~~~~~~vil~~p~~~~~~~~~-~~----~~~~~~~n~~~~~~a~~~~~~~v 172 (216)
T 3rjt_A 112 IDEYRDTLRHLVATTKPRVREMFLLSPFYLEPNRSD-PM----RKTVDAYIEAMRDVAASEHVPFV 172 (216)
T ss_dssp HHHHHHHHHHHHHHHGGGSSEEEEECCCCCCCCTTS-HH----HHHHHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHHHHhcCCeEEEECCCcCCCCcch-HH----HHHHHHHHHHHHHHHHHcCCeEE
Confidence 455566666666666666999988731122111110 00 00123456678888999887653
No 82
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=57.56 E-value=37 Score=22.19 Aligned_cols=67 Identities=7% Similarity=-0.004 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEccCCccCC-CCCCchh-------hhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 20 LAANFATCSRLVKEAASAGAKLLCFPENFSYV-GDKDADN-------IKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 20 ~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~-~~~~~~~-------~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
.+..++.+.+.++.|..-|++.|+++...... |.....+ .........+.+..+.+.|+++|+.+.+
T Consensus 85 ~~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~l 159 (301)
T 3cny_A 85 IEKASEAFEKHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAY 159 (301)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 44567888888998999999998876521101 2210000 0000001123456677778888887643
No 83
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=57.08 E-value=39 Score=22.97 Aligned_cols=39 Identities=15% Similarity=0.186 Sum_probs=23.2
Q ss_pred CCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 38 GAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 38 ~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
++.+++.+-...++|.. .+.+.++.+.++|+++++.++.
T Consensus 173 ~~~~v~~~~p~nptG~~----------~~~~~l~~l~~~~~~~~~~li~ 211 (397)
T 3fsl_A 173 GSIVLLHPCCHNPTGAD----------LTNDQWDAVIEILKARELIPFL 211 (397)
T ss_dssp TCEEEECSSSCTTTCCC----------CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEeCCCCCCCCcC----------CCHHHHHHHHHHHHhCCEEEEE
Confidence 45666666555444432 1223466777788888877754
No 84
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima}
Probab=56.49 E-value=22 Score=23.48 Aligned_cols=67 Identities=10% Similarity=0.006 Sum_probs=35.7
Q ss_pred HHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEE
Q 033342 34 AASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIR 113 (121)
Q Consensus 34 a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~ 113 (121)
|...+++++++=|-+. +-+. .....+.+.+.++.++ +..+++-+.... .-..+.+..+++. +|+++
T Consensus 152 aL~~~p~lllLDEPts--~LD~--------~~~~~l~~~l~~l~~~-g~tii~vtHd~~--~~~~~~d~v~~l~-~G~i~ 217 (266)
T 2yz2_A 152 VIVHEPDILILDEPLV--GLDR--------EGKTDLLRIVEKWKTL-GKTVILISHDIE--TVINHVDRVVVLE-KGKKV 217 (266)
T ss_dssp HHTTCCSEEEEESTTT--TCCH--------HHHHHHHHHHHHHHHT-TCEEEEECSCCT--TTGGGCSEEEEEE-TTEEE
T ss_pred HHHcCCCEEEEcCccc--cCCH--------HHHHHHHHHHHHHHHc-CCEEEEEeCCHH--HHHHhCCEEEEEE-CCEEE
Confidence 4456788888888654 2111 0112345556666555 666655543321 2223456677776 78775
Q ss_pred e
Q 033342 114 S 114 (121)
Q Consensus 114 ~ 114 (121)
.
T Consensus 218 ~ 218 (266)
T 2yz2_A 218 F 218 (266)
T ss_dssp E
T ss_pred E
Confidence 3
No 85
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=56.48 E-value=35 Score=23.65 Aligned_cols=40 Identities=8% Similarity=0.017 Sum_probs=24.1
Q ss_pred CCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 37 AGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 37 ~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
.+..+++.|-...++|... +.+.++.+.++|+++++.++.
T Consensus 194 ~~~~~v~i~~p~NPtG~~~----------~~~~l~~i~~~~~~~~~~li~ 233 (420)
T 4f4e_A 194 PGTIVVLHACCHNPTGVDL----------NDAQWAQVVEVVKARRLVPFL 233 (420)
T ss_dssp TTCEEEEECSSCTTTCCCC----------CHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCEEEEeCCCCCCCCCCC----------CHHHHHHHHHHHHHCCcEEEE
Confidence 3456777776665555431 223466777777777776654
No 86
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=56.04 E-value=31 Score=23.72 Aligned_cols=39 Identities=5% Similarity=-0.019 Sum_probs=24.4
Q ss_pred CCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 38 GAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 38 ~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
++.+++++....++|.. .+.+.++.+.++|+++++.++.
T Consensus 183 ~~~~v~~~~p~nptG~~----------~~~~~l~~l~~~~~~~~~~li~ 221 (412)
T 1ajs_A 183 FSIFVLHACAHNPTGTD----------PTPEQWKQIASVMKRRFLFPFF 221 (412)
T ss_dssp TCEEEEESSSCTTTCCC----------CCHHHHHHHHHHHHHHTCEEEE
T ss_pred CcEEEEECCCCCCCCCC----------CCHHHHHHHHHHHHHCCCEEEE
Confidence 45566677766645542 2234566777788888777754
No 87
>2voa_A AF_EXO, XTHA, exodeoxyribonuclease III; EXOIII, AP endonuclease, lyase; 1.7A {Archaeoglobus fulgidus}
Probab=55.77 E-value=19 Score=22.85 Aligned_cols=22 Identities=18% Similarity=0.294 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHCCCcEEEccCCcc
Q 033342 25 ATCSRLVKEAASAGAKLLCFPENFS 49 (121)
Q Consensus 25 ~~~~~~~~~a~~~~~dlvv~PE~~~ 49 (121)
+++.+.++ +.++|||++.|+..
T Consensus 17 ~~i~~~i~---~~~~Dii~lQE~~~ 38 (257)
T 2voa_A 17 HIVIPWLK---ENKPDILCMQETKV 38 (257)
T ss_dssp HHHHHHHH---HHCCSEEEEECCCC
T ss_pred HHHHHHHh---hcCCCEEEEEEeec
Confidence 44444444 56899999999865
No 88
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=55.71 E-value=20 Score=24.38 Aligned_cols=19 Identities=5% Similarity=0.046 Sum_probs=16.0
Q ss_pred hHHHHHHHHHHHcCcEEEe
Q 033342 68 PIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~ 86 (121)
+.++.+.++|+++++.++.
T Consensus 180 ~~l~~l~~~~~~~~~~li~ 198 (389)
T 1gd9_A 180 KDLEEIADFVVEHDLIVIS 198 (389)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHcCCEEEE
Confidence 4688899999999998865
No 89
>2jc4_A Exodeoxyribonuclease III; hydrolase, repair phosphodiesterase, DNA repair, exonuclease, endonuclease; HET: 1PE; 1.90A {Neisseria meningitidis}
Probab=55.58 E-value=26 Score=22.14 Aligned_cols=20 Identities=15% Similarity=0.047 Sum_probs=14.8
Q ss_pred HHHHHHHCCCcEEEccCCcc
Q 033342 30 LVKEAASAGAKLLCFPENFS 49 (121)
Q Consensus 30 ~~~~a~~~~~dlvv~PE~~~ 49 (121)
+.+...+.++|||++.|+..
T Consensus 18 i~~~i~~~~~DIv~LQE~~~ 37 (256)
T 2jc4_A 18 VQNLLADNPPDILVLQELKL 37 (256)
T ss_dssp HHHHHHSSCCSEEEEECCCS
T ss_pred HHHHHHhcCCCEEEEEeecc
Confidence 33334467999999999875
No 90
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=55.32 E-value=39 Score=21.72 Aligned_cols=63 Identities=19% Similarity=0.089 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEccCCccCCC-CCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 20 LAANFATCSRLVKEAASAGAKLLCFPENFSYVG-DKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 20 ~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
.+..++.+.+.++.|..-|++.|+++=...+.+ ...++... ..-+.+..+.+.|+++|+.+.+
T Consensus 78 r~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~----~~~~~l~~l~~~a~~~gv~l~l 141 (275)
T 3qc0_A 78 REKAIDDNRRAVDEAAELGADCLVLVAGGLPGGSKNIDAARR----MVVEGIAAVLPHARAAGVPLAI 141 (275)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSCEEEECBCCCTTCCCHHHHHH----HHHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEeeCCCCCCCcCHHHHHH----HHHHHHHHHHHHHHHcCCEEEE
Confidence 455678888899999999999887652222111 11111000 1124566677778888886643
No 91
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=55.04 E-value=24 Score=23.63 Aligned_cols=38 Identities=11% Similarity=0.023 Sum_probs=25.0
Q ss_pred CcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 39 AKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 39 ~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
+++|+++.-..++|.. .+.+.++.+.++|+++++.++.
T Consensus 145 ~~~v~i~~p~nptG~~----------~~~~~l~~i~~~~~~~~~~li~ 182 (361)
T 3ftb_A 145 VDSVIIGNPNNPNGGL----------INKEKFIHVLKLAEEKKKTIII 182 (361)
T ss_dssp CSEEEEETTBTTTTBC----------CCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCEEEEeCCCCCCCCC----------CCHHHHHHHHHHhhhcCCEEEE
Confidence 6777765544434432 2334578889999999998875
No 92
>3cwc_A Putative glycerate kinase 2; structural genomics, center for structural genomics of infec diseases, csgid, IDP122, transferase; 2.23A {Salmonella typhimurium LT2}
Probab=54.73 E-value=11 Score=26.88 Aligned_cols=43 Identities=19% Similarity=0.219 Sum_probs=29.9
Q ss_pred CCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEE--Eeccce
Q 033342 37 AGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWL--SLGGFQ 90 (121)
Q Consensus 37 ~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i--i~G~~~ 90 (121)
+++|||+.-|..+ -.++..+.....+.+.|+++++++ +.|+..
T Consensus 286 ~~ADLVITGEG~~-----------D~Qtl~GK~p~gVa~~A~~~~vPviaiaG~~~ 330 (383)
T 3cwc_A 286 ADADLVITGEGRI-----------DSQTIHGKVPIGVANIAKRYNKPVIGIAGSLT 330 (383)
T ss_dssp HHCSEEEECCEES-----------CC----CHHHHHHHHHHHHTTCCEEEEEEECC
T ss_pred cCCCEEEECCCCC-----------cCcCCCCcHHHHHHHHHHHhCCCEEEEeCCCC
Confidence 3689999999887 123356777888899999988655 566554
No 93
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=54.66 E-value=21 Score=24.60 Aligned_cols=19 Identities=5% Similarity=0.083 Sum_probs=15.9
Q ss_pred hHHHHHHHHHHHcCcEEEe
Q 033342 68 PIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~ 86 (121)
+.++.+.++|+++++.++.
T Consensus 180 ~~l~~i~~~~~~~~~~li~ 198 (411)
T 2o0r_A 180 TELAAIAEIAVAANLVVIT 198 (411)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHcCCEEEE
Confidence 4678899999999998865
No 94
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=54.59 E-value=28 Score=21.01 Aligned_cols=69 Identities=14% Similarity=0.127 Sum_probs=37.8
Q ss_pred EEEEEEeccc-----cCHHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCc
Q 033342 8 RVAVAQMTSI-----NDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSM 82 (121)
Q Consensus 8 ~ia~vQ~~~~-----~~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~ 82 (121)
.+.+++.-.. .+.+...+.+.++++.+.+.++++|+..-... ..+.. . ....+-+.+.++|+++++
T Consensus 64 d~Vii~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~vil~~~~~p-~~~~~----~----~~~~~n~~~~~~a~~~~v 134 (190)
T 1ivn_A 64 RWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQIRLP-ANYGR----R----YNEAFSAIYPKLAKEFDV 134 (190)
T ss_dssp SEEEEECCTTTTSSSCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCC-GGGCH----H----HHHHHHHHHHHHHHHTTC
T ss_pred CEEEEEeeccccccCCCHHHHHHHHHHHHHHHHHcCCCEEEEeccCC-cchhH----H----HHHHHHHHHHHHHHHcCC
Confidence 4556665321 24555556666666666666888877532111 11110 0 112455678889999988
Q ss_pred EEE
Q 033342 83 WLS 85 (121)
Q Consensus 83 ~ii 85 (121)
.++
T Consensus 135 ~~i 137 (190)
T 1ivn_A 135 PLL 137 (190)
T ss_dssp CEE
T ss_pred eEE
Confidence 764
No 95
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=54.55 E-value=48 Score=22.62 Aligned_cols=53 Identities=13% Similarity=0.150 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHC--CCcEE-EccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 24 FATCSRLVKEAASA--GAKLL-CFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 24 ~~~~~~~~~~a~~~--~~dlv-v~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
.+.+++.++.+... ++++| ++|=...++|.. .+.+.++.+.++|+++++.++.
T Consensus 158 ~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~----------~~~~~l~~i~~~~~~~~~~li~ 213 (407)
T 2zc0_A 158 VDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVT----------MSMERRKALLEIASKYDLLIIE 213 (407)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCC----------CCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHhhhcccCCceEEEECCCCCCCCCcC----------CCHHHHHHHHHHHHHcCCEEEE
Confidence 33444444422223 56676 455433334432 2335677899999999998865
No 96
>1oxx_K GLCV, glucose, ABC transporter, ATP binding protein; ABC-ATPase, ATP-binding cassette, ATPase, transport protein; 1.45A {Sulfolobus solfataricus} SCOP: b.40.6.3 c.37.1.12 PDB: 1oxs_C 1oxt_A 1oxu_A* 1oxv_A*
Probab=54.23 E-value=13 Score=25.97 Aligned_cols=66 Identities=14% Similarity=0.107 Sum_probs=35.8
Q ss_pred HCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEe
Q 033342 36 SAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRS 114 (121)
Q Consensus 36 ~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~ 114 (121)
..+++++++=|=+. + +.........+.+.++.++.++.+++-+.... .-..+-+..++++ +|+++.
T Consensus 156 ~~~P~lLLLDEP~s--~--------LD~~~r~~l~~~l~~l~~~~g~tvi~vTHd~~--~~~~~adri~vl~-~G~i~~ 221 (353)
T 1oxx_K 156 VKDPSLLLLDEPFS--N--------LDARMRDSARALVKEVQSRLGVTLLVVSHDPA--DIFAIADRVGVLV-KGKLVQ 221 (353)
T ss_dssp TTCCSEEEEESTTT--T--------SCGGGHHHHHHHHHHHHHHHCCEEEEEESCHH--HHHHHCSEEEEEE-TTEEEE
T ss_pred HhCCCEEEEECCcc--c--------CCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHHHhCCEEEEEE-CCEEEE
Confidence 35678888877554 1 11112234566677777776776765543210 1113345566675 687753
No 97
>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*
Probab=54.01 E-value=26 Score=19.40 Aligned_cols=46 Identities=9% Similarity=0.113 Sum_probs=28.2
Q ss_pred HHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEeeee
Q 033342 70 MQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYR 117 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~~y~ 117 (121)
++.+.+.+++.++.++.+..... .....+..+++.+|+|..+..+.
T Consensus 84 ~~~~~~~l~~~G~~~~~~~~~~~--~~~g~~~~~~~~DPdG~~iel~~ 129 (133)
T 3ey7_A 84 LSDAMKHVEDQGVTIMEGPVKRT--GAQGAITSFYFRDPDGNLIEVST 129 (133)
T ss_dssp HHHHHHHHHHTTCCCCEEEEEEE--ETTEEEEEEEEECTTCCEEEEEE
T ss_pred HHHHHHHHHHCCCccccCCcccc--CCCCCeEEEEEECCCCCEEEEEe
Confidence 55555556677877755422221 22234567889999998876543
No 98
>3lda_A DNA repair protein RAD51; DNA binding protein, ATP-binding, DNA damage, DNA recombinat repair, nucleotide-binding; HET: DNA; 2.50A {Saccharomyces cerevisiae} PDB: 1szp_A*
Probab=53.70 E-value=44 Score=23.68 Aligned_cols=57 Identities=7% Similarity=0.017 Sum_probs=30.6
Q ss_pred HHHHHCCCcEEEccCCccCCCCCCchhhhccc--CCCChHHHHHHHHHHHcCcEEEecc
Q 033342 32 KEAASAGAKLLCFPENFSYVGDKDADNIKIAE--PLDGPIMQGYCSLARESSMWLSLGG 88 (121)
Q Consensus 32 ~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~a~~~~~~ii~G~ 88 (121)
+.....++++||+=|................+ ..-......|..+++++++.+++-+
T Consensus 267 ~~l~~~~~~llVIDs~t~~~~~~~sg~g~l~~Rq~~l~~il~~L~~lake~gitVIlv~ 325 (400)
T 3lda_A 267 QMMSESRFSLIVVDSVMALYRTDFSGRGELSARQMHLAKFMRALQRLADQFGVAVVVTN 325 (400)
T ss_dssp HHHHHSCEEEEEEETGGGGCC------CCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
T ss_pred HHHHhcCCceEEecchhhhCchhhcCccchHHHHHHHHHHHHHHHHHHHHcCCEEEEEE
Confidence 33345689999998876511110000000000 0013567778899999998886553
No 99
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=53.69 E-value=45 Score=23.38 Aligned_cols=67 Identities=15% Similarity=0.097 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHCCCc-----EEEcc----CCccCCCC---CCchhhhccc--CCCChHHHHHHHHHHHcCcEEEecc
Q 033342 23 NFATCSRLVKEAASAGAK-----LLCFP----ENFSYVGD---KDADNIKIAE--PLDGPIMQGYCSLARESSMWLSLGG 88 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~d-----lvv~P----E~~~~~~~---~~~~~~~~~~--~~~~~~~~~l~~~a~~~~~~ii~G~ 88 (121)
.++...++++.|++.|+| -|=|. |......+ ...++....+ ....+....|.+.|++.|+.++...
T Consensus 19 dle~Ak~lI~~A~~aGad~~~d~avKfQt~~~d~l~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~Gi~~~st~ 98 (350)
T 3g8r_A 19 NVEHGVALIRAIRESCQGFDFDFGFKLQYRNLDTFIHSSFKGRDDVKYVKRFEETRLQPEQMQKLVAEMKANGFKAICTP 98 (350)
T ss_dssp CSHHHHHHHHHHHHHTTTCCSEEEEEEEECCHHHHBCGGGTTCCSSSSHHHHHHTCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cHHHHHHHHHHHHHhCCcccCCeeEEccccchhhhcChhccCccHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCcEEecc
Confidence 455777777777776776 66663 33221111 0011111111 2566788899999999999887653
Q ss_pred c
Q 033342 89 F 89 (121)
Q Consensus 89 ~ 89 (121)
+
T Consensus 99 f 99 (350)
T 3g8r_A 99 F 99 (350)
T ss_dssp C
T ss_pred C
Confidence 3
No 100
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=53.63 E-value=16 Score=25.24 Aligned_cols=21 Identities=19% Similarity=0.069 Sum_probs=16.6
Q ss_pred CChHHHHHHHHHHHcCcEEEe
Q 033342 66 DGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 66 ~~~~~~~l~~~a~~~~~~ii~ 86 (121)
+.+.++.+.++|+++++.++.
T Consensus 195 ~~~~l~~i~~~~~~~~~~li~ 215 (416)
T 1bw0_A 195 SRKHVEDIVRLAEELRLPLFS 215 (416)
T ss_dssp CHHHHHHHHHHHHHHTCCEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEE
Confidence 345688899999999987764
No 101
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=53.62 E-value=12 Score=24.90 Aligned_cols=40 Identities=13% Similarity=0.233 Sum_probs=22.2
Q ss_pred CcccEEEEEEeccccCHHHHHHHHHHHHHHHHHCCCcEEEc-cCCc
Q 033342 4 AHSVRVAVAQMTSINDLAANFATCSRLVKEAASAGAKLLCF-PENF 48 (121)
Q Consensus 4 ~~~~~ia~vQ~~~~~~~~~n~~~~~~~~~~a~~~~~dlvv~-PE~~ 48 (121)
+.++||+++- |.-.|+..+...++.+...++|.|++ --.+
T Consensus 9 ~~~~~i~~iS-----DiHg~~~~l~~vl~~~~~~~~D~ii~~GDlv 49 (270)
T 3qfm_A 9 MDMTKIALLS-----DIHGNTTALEAVLADARQLGVDEYWLLGDIL 49 (270)
T ss_dssp --CEEEEEEC-----CCTTCHHHHHHHHHHHHHTTCCEEEECSCCS
T ss_pred ccccEEEEEe-----cCCCCHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 4567777663 22234455666666666678887655 4443
No 102
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=53.43 E-value=43 Score=23.29 Aligned_cols=53 Identities=11% Similarity=0.041 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHC--CCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 24 FATCSRLVKEAASA--GAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 24 ~~~~~~~~~~a~~~--~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
.+.+++.++.+... ++.+|++.--..++|.. .+.+.++.+.++|+++++.++.
T Consensus 175 ~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~----------~~~~~l~~l~~~~~~~~~~li~ 229 (435)
T 3piu_A 175 ETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTT----------MTRNELYLLLSFVEDKGIHLIS 229 (435)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCC----------CCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCC----------CCHHHHHHHHHHHHHcCCEEEE
Confidence 45555666554443 44555543323334432 2234578889999999988864
No 103
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=53.21 E-value=42 Score=21.45 Aligned_cols=64 Identities=16% Similarity=0.051 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEE
Q 033342 20 LAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLS 85 (121)
Q Consensus 20 ~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii 85 (121)
.+..++.+.+.++.|..-|++.|++.=... .+........... ..-+.+..+.+.|+++|+.+.
T Consensus 71 r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~-~~~~~~~~~~~~~-~~~~~l~~l~~~a~~~gv~l~ 134 (254)
T 3ayv_A 71 RGLTLRRLLFGLDRAAELGADRAVFHSGIP-HGRTPEEALERAL-PLAEALGLVVRRARTLGVRLL 134 (254)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEECCCC-TTCCHHHHHHTHH-HHHHHTHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEECCCCC-cccccccHHHHHH-HHHHHHHHHHHHHhhcCCEEE
Confidence 355678888899999999999887643222 1110000000000 111234556667777888764
No 104
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=52.87 E-value=14 Score=25.86 Aligned_cols=68 Identities=13% Similarity=0.028 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEcc----CCcc-CCC--CCCc-------hhhhcccCCCChHHHHHHHHHHHcCcEEE
Q 033342 20 LAANFATCSRLVKEAASAGAKLLCFP----ENFS-YVG--DKDA-------DNIKIAEPLDGPIMQGYCSLARESSMWLS 85 (121)
Q Consensus 20 ~~~n~~~~~~~~~~a~~~~~dlvv~P----E~~~-~~~--~~~~-------~~~~~~~~~~~~~~~~l~~~a~~~~~~ii 85 (121)
-.++++...++++.|++.|||.|=|. ++.. ... |... ++..... ...+....|.+.|++.|+.++
T Consensus 30 H~gs~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~-l~~e~~~~L~~~~~~~Gi~~~ 108 (349)
T 2wqp_A 30 HEGSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCA-LNEEDEIKLKEYVESKGMIFI 108 (349)
T ss_dssp TTTCHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHC-CCHHHHHHHHHHHHHTTCEEE
T ss_pred ccCCHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhC-CCHHHHHHHHHHHHHhCCeEE
Confidence 35567889999999999999998773 4321 001 2110 1111112 466778899999999999886
Q ss_pred ecc
Q 033342 86 LGG 88 (121)
Q Consensus 86 ~G~ 88 (121)
.--
T Consensus 109 st~ 111 (349)
T 2wqp_A 109 STL 111 (349)
T ss_dssp EEE
T ss_pred Eee
Confidence 553
No 105
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=52.74 E-value=26 Score=22.75 Aligned_cols=22 Identities=14% Similarity=0.214 Sum_probs=16.3
Q ss_pred CCCceEEEEEEECCCCCEEeee
Q 033342 95 DDARLCNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 95 ~~~~~~Ns~~~i~~~G~i~~~y 116 (121)
..|..+-+.++|+|+|.+...+
T Consensus 142 ~~g~~~R~tFiIDp~g~Ir~~~ 163 (219)
T 3tue_A 142 SQGVAYRGLFIIDPHGMLRQIT 163 (219)
T ss_dssp TTTEECEEEEEECTTSBEEEEE
T ss_pred CCCeeEEEEEEECCCCeEEEEE
Confidence 3455667889999999886543
No 106
>2jc5_A Exodeoxyribonuclease; hydrolase, repair phosphodiesterase, DNA repair, exonuclease, endonuclease; HET: BCN DIO GOL; 1.50A {Neisseria meningitidis}
Probab=52.53 E-value=16 Score=23.16 Aligned_cols=17 Identities=29% Similarity=0.491 Sum_probs=13.5
Q ss_pred HHHHCCCcEEEccCCcc
Q 033342 33 EAASAGAKLLCFPENFS 49 (121)
Q Consensus 33 ~a~~~~~dlvv~PE~~~ 49 (121)
.....++|||++.|+..
T Consensus 23 ~i~~~~~DIi~LQE~~~ 39 (259)
T 2jc5_A 23 YIAASGADIVCVQELKA 39 (259)
T ss_dssp HHHHTTCSEEEEECCCC
T ss_pred HHHhcCCCEEEEEEecc
Confidence 33467999999999875
No 107
>3g6s_A Putative endonuclease/exonuclease/phosphatase family protein; alpha-beta protein, structural genomics, PSI-2; 2.50A {Bacteroides vulgatus atcc 8482}
Probab=52.02 E-value=15 Score=23.71 Aligned_cols=24 Identities=8% Similarity=0.166 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHCCCcEEEccCCcc
Q 033342 23 NFATCSRLVKEAASAGAKLLCFPENFS 49 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlvv~PE~~~ 49 (121)
..+.+.+.++ ..++|||++.|...
T Consensus 26 r~~~i~~~i~---~~~~DIv~LQEv~~ 49 (267)
T 3g6s_A 26 RKDRVCQFIK---DHELDIVGMQEVLH 49 (267)
T ss_dssp THHHHHHHHH---HTTCSEEEEESBCH
T ss_pred HHHHHHHHHH---HcCCCEEEEecCCH
Confidence 3444545444 56999999999863
No 108
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=51.72 E-value=38 Score=20.51 Aligned_cols=65 Identities=8% Similarity=-0.102 Sum_probs=34.6
Q ss_pred CHHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEE
Q 033342 19 DLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLS 85 (121)
Q Consensus 19 ~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii 85 (121)
+.+...+.+..+++.+.+.++.+++.--.-. ........ .........+-+.+.++|+++++.++
T Consensus 95 ~~~~~~~~~~~~i~~~~~~~~~vil~~~~p~-~~~~~~~~-~~~~~~~~~~n~~l~~~a~~~~v~~i 159 (204)
T 3p94_A 95 ALENVFGNLVSMAELAKANHIKVIFCSVLPA-YDFPWRPG-MQPADKVIQLNKWIKEYADKNGLTYV 159 (204)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEECCCCC-SCBTTBTT-CCCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CHHHHHHHHHHHHHHHHhCCCeEEEEeCCCC-CCCCCCcc-ccHHHHHHHHHHHHHHHHHHcCCcEE
Confidence 4555566666666666667888887732111 11110000 00000113456678888999988774
No 109
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=51.31 E-value=26 Score=23.69 Aligned_cols=40 Identities=15% Similarity=0.133 Sum_probs=26.3
Q ss_pred CCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 37 AGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 37 ~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
.++++|++++-..++|.. .+.+.++.+.++|+++++.++.
T Consensus 145 ~~~~~v~i~~p~nptG~~----------~~~~~l~~i~~~~~~~~~~li~ 184 (364)
T 1lc5_A 145 PDLDCLFLCTPNNPTGLL----------PERPLLQAIADRCKSLNINLIL 184 (364)
T ss_dssp TTCCEEEEESSCTTTCCC----------CCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCEEEEeCCCCCCCCC----------CCHHHHHHHHHHhhhcCcEEEE
Confidence 456777666554434432 2335688899999999988865
No 110
>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A
Probab=51.18 E-value=33 Score=19.77 Aligned_cols=45 Identities=11% Similarity=0.088 Sum_probs=27.1
Q ss_pred HHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEeee
Q 033342 70 MQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~~y 116 (121)
++.+.+.+++.|+.++.+-.... ......-.+++.+|+|..+..+
T Consensus 97 l~~~~~~l~~~G~~~~~~p~~~~--~~~g~~~~~~~~DPdG~~iEl~ 141 (152)
T 3huh_A 97 INDVVSEILQAGISIVEGPVERT--GATGEIMSIYIRDPDGNLIEIS 141 (152)
T ss_dssp HHHHHHHHHHTTCCCSEEEEEEE--ETTEEEEEEEEECTTCCEEEEE
T ss_pred HHHHHHHHHHCCCeEecCCcccc--CCCCcEEEEEEECCCCCEEEEE
Confidence 45555566777877755422221 2223456778999999876554
No 111
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=51.07 E-value=19 Score=24.68 Aligned_cols=19 Identities=16% Similarity=0.475 Sum_probs=15.6
Q ss_pred hHHHHHHHHHHHcCcEEEe
Q 033342 68 PIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~ 86 (121)
+.++.+.++|+++++.++.
T Consensus 194 ~~l~~l~~~~~~~~~~li~ 212 (389)
T 1o4s_A 194 EFLEGLVRLAKKRNFYIIS 212 (389)
T ss_dssp HHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHcCCEEEE
Confidence 5678899999999988864
No 112
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=50.79 E-value=51 Score=21.80 Aligned_cols=65 Identities=14% Similarity=-0.030 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCC-c--hhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 20 LAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKD-A--DNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 20 ~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~-~--~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
.+..++.+.+.++.|..-|++.|+.|=... .|... . ...... ....+.+..+.+.|+++|+.+.+
T Consensus 102 r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~-~g~~~~~~~~~~~~~-~~~~~~l~~l~~~a~~~gv~l~l 169 (309)
T 2hk0_A 102 RAAGKAFFERTLSNVAKLDIHTIGGALHSY-WPIDYSQPVDKAGDY-ARGVEGINGIADFANDLGINLCI 169 (309)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEECTTSC-SSCCTTSCCCHHHHH-HHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEeecccc-ccccCCCcCChHHHH-HHHHHHHHHHHHHHHHcCCEEEE
Confidence 356678889999999999999888542111 12210 0 000000 01123556667778888887643
No 113
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=50.45 E-value=23 Score=20.67 Aligned_cols=42 Identities=12% Similarity=0.016 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 25 ATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 25 ~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
+.+.+.++++.+.|+.-|+|. .|+. -+.+.+.|+++++-++.
T Consensus 69 ~~v~~~v~e~~~~g~k~v~~~-----~G~~---------------~~e~~~~a~~~Girvv~ 110 (122)
T 3ff4_A 69 QNQLSEYNYILSLKPKRVIFN-----PGTE---------------NEELEEILSENGIEPVI 110 (122)
T ss_dssp HHHGGGHHHHHHHCCSEEEEC-----TTCC---------------CHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEEC-----CCCC---------------hHHHHHHHHHcCCeEEC
Confidence 455666777777788865443 2321 14788899999999873
No 114
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=50.25 E-value=26 Score=23.75 Aligned_cols=19 Identities=0% Similarity=-0.027 Sum_probs=15.9
Q ss_pred hHHHHHHHHHHHcCcEEEe
Q 033342 68 PIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~ 86 (121)
..++.+.++|+++++.++.
T Consensus 184 ~~l~~i~~~~~~~~~~li~ 202 (391)
T 4dq6_A 184 DELKKLGDICLKHNVKIIS 202 (391)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHcCCEEEe
Confidence 4588899999999998864
No 115
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=49.95 E-value=14 Score=22.34 Aligned_cols=18 Identities=22% Similarity=0.165 Sum_probs=14.4
Q ss_pred EEEEEECCCCCEEeeeec
Q 033342 101 NTHVLLDDAGNIRSTYRK 118 (121)
Q Consensus 101 Ns~~~i~~~G~i~~~y~K 118 (121)
.+.++|+++|+++..|..
T Consensus 128 ~~~~lID~~G~i~~~~~g 145 (170)
T 3me7_A 128 NVVVVLSPELQIKDYIYG 145 (170)
T ss_dssp CEEEEECTTSBEEEEEES
T ss_pred ceEEEECCCCeEEEEEeC
Confidence 467999999999877643
No 116
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=49.77 E-value=46 Score=23.48 Aligned_cols=39 Identities=15% Similarity=0.094 Sum_probs=26.5
Q ss_pred CCcEE-EccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 38 GAKLL-CFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 38 ~~dlv-v~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
++.+| +.|-...++|.. .+.+.++.+.++|+++++.++.
T Consensus 216 ~~k~v~~~~~~~NPtG~~----------~~~~~l~~i~~la~~~~~~lI~ 255 (448)
T 3aow_A 216 KVKVVYTVPTFQNPAGVT----------MNEDRRKYLLELASEYDFIVVE 255 (448)
T ss_dssp CEEEEEECCSSCTTTCCC----------CCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCeEEEECCCCCCCcCCC----------CCHHHHHHHHHHHHHcCCEEEE
Confidence 57776 566655544532 2335678899999999998864
No 117
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=49.75 E-value=7.7 Score=23.91 Aligned_cols=16 Identities=25% Similarity=0.376 Sum_probs=13.7
Q ss_pred EEEEECCCCCEEeeee
Q 033342 102 THVLLDDAGNIRSTYR 117 (121)
Q Consensus 102 s~~~i~~~G~i~~~y~ 117 (121)
+.++|+++|+++..|.
T Consensus 151 ~~~liD~~G~i~~~~~ 166 (187)
T 3dwv_A 151 TSFLIDRDGVPVERFS 166 (187)
T ss_dssp CEEEECTTSCEEEEEC
T ss_pred eEEEECCCCCEEEEEC
Confidence 7899999999987764
No 118
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=49.33 E-value=23 Score=24.16 Aligned_cols=19 Identities=0% Similarity=-0.029 Sum_probs=15.5
Q ss_pred hHHHHHHHHHHHcCcEEEe
Q 033342 68 PIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~ 86 (121)
+.++.+.++|++++++++.
T Consensus 183 ~~l~~i~~~~~~~~~~li~ 201 (386)
T 1u08_A 183 ADFAALWQAIAGHEIFVIS 201 (386)
T ss_dssp HHHHHHHHHHTTSCCEEEE
T ss_pred HHHHHHHHHHHHcCcEEEE
Confidence 4678889999999988864
No 119
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=49.33 E-value=42 Score=20.36 Aligned_cols=16 Identities=31% Similarity=0.574 Sum_probs=13.7
Q ss_pred EEEEECCCCCEEeeee
Q 033342 102 THVLLDDAGNIRSTYR 117 (121)
Q Consensus 102 s~~~i~~~G~i~~~y~ 117 (121)
+.++|+++|+++..|.
T Consensus 154 ~~~lid~~G~i~~~~~ 169 (185)
T 2gs3_A 154 TKFLIDKNGCVVKRYG 169 (185)
T ss_dssp CEEEECTTSCEEEEEC
T ss_pred eEEEECCCCCEEEeeC
Confidence 7899999999987763
No 120
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=49.30 E-value=14 Score=21.68 Aligned_cols=104 Identities=13% Similarity=0.102 Sum_probs=49.4
Q ss_pred EEEEEEecc-c-cC-HHHHHHHHHHHHHHHHH----CCCcEEEccCCccCCCCCCchhhhcccCC--CCh----HHHHHH
Q 033342 8 RVAVAQMTS-I-ND-LAANFATCSRLVKEAAS----AGAKLLCFPENFSYVGDKDADNIKIAEPL--DGP----IMQGYC 74 (121)
Q Consensus 8 ~ia~vQ~~~-~-~~-~~~n~~~~~~~~~~a~~----~~~dlvv~PE~~~~~~~~~~~~~~~~~~~--~~~----~~~~l~ 74 (121)
|+.++-+-. + .. +...+..+.++.++... .++.+|...=-.- ....+.+..+.... .-. ..+...
T Consensus 24 k~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~--~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 24 QWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPE--RDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp CEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTT--TCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCC--CCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 344555433 3 55 77777777777666544 3566655421000 00011111111111 000 024455
Q ss_pred HHHHHcCcEEEeccceeecCCCCc----eEEEEEEECCCCCEEeeee
Q 033342 75 SLARESSMWLSLGGFQEKGSDDAR----LCNTHVLLDDAGNIRSTYR 117 (121)
Q Consensus 75 ~~a~~~~~~ii~G~~~~~~~~~~~----~~Ns~~~i~~~G~i~~~y~ 117 (121)
++++.+++..+-. .. ..++. .-++.++++++|+++..|.
T Consensus 102 ~~~~~~~v~~~p~--~~--~~~~~~~~~~~~~~~lid~~G~i~~~~~ 144 (164)
T 2ggt_A 102 QVARAYRVYYSPG--PK--DEDEDYIVDHTIIMYLIGPDGEFLDYFG 144 (164)
T ss_dssp HHHHTTTCCEEEE--EE--CTTSCEEEEECCEEEEECTTSCEEEEEE
T ss_pred HHHHhcCeEEEec--CC--CCCCCeeEeccceEEEECCCCeEEEEeC
Confidence 6777777644221 11 11221 1237899999999987764
No 121
>3d31_A Sulfate/molybdate ABC transporter, ATP-binding protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: b.40.6.3 c.37.1.12
Probab=48.27 E-value=13 Score=25.83 Aligned_cols=44 Identities=5% Similarity=0.055 Sum_probs=25.0
Q ss_pred hHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEe
Q 033342 68 PIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRS 114 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~ 114 (121)
...+.+.++.++.++.+++-+.... .--.+-+..++++ +|+++.
T Consensus 165 ~l~~~l~~l~~~~g~tii~vTHd~~--~~~~~adri~vl~-~G~i~~ 208 (348)
T 3d31_A 165 NAREMLSVLHKKNKLTVLHITHDQT--EARIMADRIAVVM-DGKLIQ 208 (348)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESCHH--HHHHHCSEEEEES-SSCEEE
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCHH--HHHHhCCEEEEEE-CCEEEE
Confidence 4556666777776777765543210 1113445667775 787754
No 122
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=47.73 E-value=53 Score=22.37 Aligned_cols=50 Identities=16% Similarity=0.059 Sum_probs=27.0
Q ss_pred HHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHc-CcEE
Q 033342 30 LVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARES-SMWL 84 (121)
Q Consensus 30 ~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~-~~~i 84 (121)
.++...+.|+|.|.+.+.+. ....++.+.++ ..++...+.+..++. ++.+
T Consensus 184 ~~~~~~~aGad~i~i~d~~~-~~lsp~~f~ef----~~p~~k~i~~~i~~~~g~~~ 234 (338)
T 2eja_A 184 YLKEQIKAGADVVQIFDSWV-NNLSLEDYGEY----VYPYVNYLISELKDFSDTPV 234 (338)
T ss_dssp HHHHHHHTTCSEEEEEETTG-GGSCHHHHHHH----THHHHHHHHHHHHHHCCCCE
T ss_pred HHHHHHHhCCCEEEEecCcc-ccCCHHHHHHH----hHHHHHHHHHHHhhcCCCCE
Confidence 33444567999999988774 22222223333 334555555555544 5433
No 123
>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}
Probab=47.72 E-value=38 Score=19.35 Aligned_cols=43 Identities=9% Similarity=0.102 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEeeee
Q 033342 69 IMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYR 117 (121)
Q Consensus 69 ~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~~y~ 117 (121)
-++.+.+.+++.|+.++.+-... ..+ . .+++.+|+|..+..+.
T Consensus 108 d~~~~~~~l~~~G~~~~~~~~~~---~~g--~-~~~~~DPdG~~iel~~ 150 (156)
T 3kol_A 108 LFDRAVTVIGENKIAIAHGPVTR---PTG--R-GVYFYDPDGFMIEIRC 150 (156)
T ss_dssp GHHHHHHHHHHTTCCEEEEEEEC----CC--E-EEEEECTTSCEEEEEE
T ss_pred HHHHHHHHHHHCCCccccCceec---CCc--c-EEEEECCCCCEEEEEe
Confidence 45666666777788776552222 333 2 7789999998876654
No 124
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=47.42 E-value=29 Score=24.40 Aligned_cols=32 Identities=13% Similarity=-0.077 Sum_probs=26.1
Q ss_pred cCHHHHHHHHHHHHHHHHHCCCcEEEccCCcc
Q 033342 18 NDLAANFATCSRLVKEAASAGAKLLCFPENFS 49 (121)
Q Consensus 18 ~~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~ 49 (121)
.+.+++++.+.+.++.|.+.+.++.+-+|...
T Consensus 121 ~s~~e~l~~~~~~v~~a~~~g~~v~~~~ed~~ 152 (370)
T 3rmj_A 121 MKPKQVIEAAVKAVKIAREYTDDVEFSCEDAL 152 (370)
T ss_dssp CCHHHHHHHHHHHHHHHTTTCSCEEEEEETGG
T ss_pred CCHHHHHHHHHHHHHHHHHcCCEEEEecCCCC
Confidence 56888899999999998888888877777553
No 125
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=47.34 E-value=21 Score=24.45 Aligned_cols=19 Identities=21% Similarity=0.401 Sum_probs=15.7
Q ss_pred hHHHHHHHHHHHcCcEEEe
Q 033342 68 PIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~ 86 (121)
+.++.+.++|+++++.++.
T Consensus 184 ~~l~~i~~~~~~~~~~li~ 202 (385)
T 1b5p_A 184 EVLEALARLAVEHDFYLVS 202 (385)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHcCCEEEE
Confidence 5578899999999988864
No 126
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=47.11 E-value=62 Score=21.92 Aligned_cols=37 Identities=14% Similarity=-0.066 Sum_probs=21.8
Q ss_pred CcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEE
Q 033342 39 AKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLS 85 (121)
Q Consensus 39 ~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii 85 (121)
..++++|....++|... +.+.++.+.++|+++++.++
T Consensus 173 ~~~v~~~~p~nptG~~~----------~~~~l~~l~~~~~~~~~~li 209 (396)
T 2q7w_A 173 DVVLFHGCCHNPTGIDP----------TLEQWQTLAQLSVEKGWLPL 209 (396)
T ss_dssp CEEEEECSSCTTTCCCC----------CHHHHHHHHHHHHHHTCEEE
T ss_pred CEEEEeCCCCCCCCCCC----------CHHHHHHHHHHHHHCCCEEE
Confidence 45677677665455421 22345667777777776665
No 127
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=46.99 E-value=46 Score=24.38 Aligned_cols=46 Identities=15% Similarity=0.130 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEec
Q 033342 25 ATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLG 87 (121)
Q Consensus 25 ~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G 87 (121)
+.+.+.++++.+.|+.+||+.|.+. ......+.+.|+++++-++..
T Consensus 47 ~~v~~~v~e~~~~Gv~~viis~Gf~-----------------~~~~~~l~~~A~~~g~rliGP 92 (480)
T 3dmy_A 47 EYAAELANQALDRNLNVMMFSDNVT-----------------LEDEIQLKTRAREKGLLVMGP 92 (480)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCCC-----------------HHHHHHHHHHHHHTTCCEECS
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCC-----------------HHHHHHHHHHHHHcCCEEEec
Confidence 4566778888888999888877653 123467889999999988654
No 128
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=46.95 E-value=28 Score=23.82 Aligned_cols=40 Identities=8% Similarity=0.051 Sum_probs=23.2
Q ss_pred CCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 37 AGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 37 ~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
.++.+|+++=...++|.. .+.+.++.+.++|+++++.++.
T Consensus 174 ~~~~~v~i~~p~NPtG~~----------~~~~~l~~i~~~~~~~~~~li~ 213 (401)
T 7aat_A 174 EKSIILLHACAHNPTGVD----------PRQEQWKELASVVKKRNLLAYF 213 (401)
T ss_dssp TTCEEEEESSSCTTTCCC----------CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCcEEEEeCCCCCCCCCC----------CCHHHHHHHHHHHHhCCcEEEE
Confidence 355666666444444432 1234467777888888876643
No 129
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus}
Probab=46.82 E-value=40 Score=22.48 Aligned_cols=66 Identities=14% Similarity=0.005 Sum_probs=33.2
Q ss_pred HHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEE--EeccceeecCCCCceEEEEEEECCCCCE
Q 033342 35 ASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWL--SLGGFQEKGSDDARLCNTHVLLDDAGNI 112 (121)
Q Consensus 35 ~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i--i~G~~~~~~~~~~~~~Ns~~~i~~~G~i 112 (121)
...+++++++=|=+. +-+.. ....+.+.+.+++++ +..+ ++-+-... .-..+.+..+++. +|++
T Consensus 176 L~~~p~lLlLDEPts--~LD~~--------~~~~l~~~l~~l~~~-g~tv~~iivtHd~~--~~~~~~d~v~~l~-~G~i 241 (279)
T 2ihy_A 176 LMGQPQVLILDEPAA--GLDFI--------ARESLLSILDSLSDS-YPTLAMIYVTHFIE--EITANFSKILLLK-DGQS 241 (279)
T ss_dssp HHTCCSEEEEESTTT--TCCHH--------HHHHHHHHHHHHHHH-CTTCEEEEEESCGG--GCCTTCCEEEEEE-TTEE
T ss_pred HhCCCCEEEEeCCcc--ccCHH--------HHHHHHHHHHHHHHC-CCEEEEEEEecCHH--HHHHhCCEEEEEE-CCEE
Confidence 345778888877554 21110 112345556666655 4333 33322211 2123556677775 7877
Q ss_pred Ee
Q 033342 113 RS 114 (121)
Q Consensus 113 ~~ 114 (121)
+.
T Consensus 242 ~~ 243 (279)
T 2ihy_A 242 IQ 243 (279)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 130
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=46.48 E-value=31 Score=23.90 Aligned_cols=20 Identities=5% Similarity=0.009 Sum_probs=16.6
Q ss_pred ChHHHHHHHHHHHcCcEEEe
Q 033342 67 GPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 67 ~~~~~~l~~~a~~~~~~ii~ 86 (121)
.+.++.+.++|+++++.++.
T Consensus 201 ~~~l~~i~~~~~~~~~~li~ 220 (429)
T 1yiz_A 201 RAELEVVANLCKKWNVLCVS 220 (429)
T ss_dssp HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHcCcEEEE
Confidence 34688899999999998875
No 131
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=46.37 E-value=24 Score=24.27 Aligned_cols=19 Identities=11% Similarity=0.050 Sum_probs=15.0
Q ss_pred hHHHHHHHHHHHcCcEEEe
Q 033342 68 PIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~ 86 (121)
+.++.+.++|++++++++.
T Consensus 194 ~~l~~i~~~a~~~~~~li~ 212 (406)
T 1xi9_A 194 KTLEEILNIAGEYEIPVIS 212 (406)
T ss_dssp HHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHcCCEEEE
Confidence 4578888899998887764
No 132
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=46.33 E-value=68 Score=22.54 Aligned_cols=52 Identities=10% Similarity=0.106 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 24 FATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 24 ~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
++.+++.++.+ ..+..+++.+....++|.. .+.+.++.+.++|+++++.++.
T Consensus 189 ~e~l~~~l~~~-~~~~~~v~~~~p~NPtG~~----------~~~~~l~~i~~l~~~~~~~li~ 240 (448)
T 3meb_A 189 FSNTKKDIQSA-PEKSIFLFHACAHNPSGID----------FTEAQWKELLPIMKEKKHIAFF 240 (448)
T ss_dssp HHHHHHHHHHS-CTTCEEEEESSSCTTTCCC----------CCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHhC-CCCcEEEEeCCCCCCCCcC----------CCHHHHHHHHHHHHHCCCEEEE
Confidence 34444444321 1345666777766655543 2223466788888888877754
No 133
>4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis}
Probab=46.28 E-value=12 Score=24.95 Aligned_cols=64 Identities=14% Similarity=0.051 Sum_probs=33.7
Q ss_pred CCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEe
Q 033342 38 GAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRS 114 (121)
Q Consensus 38 ~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~ 114 (121)
+++++++=|=+. +-+. .....+.+.+.+++++.++.+++-+.... .-..+-+..+++. +|+++.
T Consensus 165 ~p~lLllDEPts--~LD~--------~~~~~i~~~l~~l~~~~~~tvi~vtHdl~--~~~~~~d~v~vl~-~G~i~~ 228 (266)
T 4g1u_C 165 TPRWLFLDEPTS--ALDL--------YHQQHTLRLLRQLTRQEPLAVCCVLHDLN--LAALYADRIMLLA-QGKLVA 228 (266)
T ss_dssp CCEEEEECCCCS--SCCH--------HHHHHHHHHHHHHHHHSSEEEEEECSCHH--HHHHHCSEEEEEE-TTEEEE
T ss_pred CCCEEEEeCccc--cCCH--------HHHHHHHHHHHHHHHcCCCEEEEEEcCHH--HHHHhCCEEEEEE-CCEEEE
Confidence 677777777553 2111 01224566677777776766655532210 1113445666775 677754
No 134
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=46.28 E-value=43 Score=22.65 Aligned_cols=20 Identities=25% Similarity=0.132 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHCCCcEE
Q 033342 23 NFATCSRLVKEAASAGAKLL 42 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlv 42 (121)
+.+...++.+.|.+.|+|-+
T Consensus 88 ~t~~ai~la~~a~~~Gadav 107 (301)
T 3m5v_A 88 ATHEAVGLAKFAKEHGADGI 107 (301)
T ss_dssp SHHHHHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHHHHHcCCCEE
Confidence 45667778888888899853
No 135
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=46.15 E-value=62 Score=22.66 Aligned_cols=56 Identities=13% Similarity=0.024 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHCCCcEEEc----cCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEec
Q 033342 22 ANFATCSRLVKEAASAGAKLLCF----PENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLG 87 (121)
Q Consensus 22 ~n~~~~~~~~~~a~~~~~dlvv~----PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G 87 (121)
++.+...+.++.+++.|+|++-| |+++. .+|.. ...+.+..+.+.+++.|+.++.-
T Consensus 117 es~e~a~~~a~~~k~aGa~~vr~q~fKprTs~-~~f~g---------lg~egl~~l~~~~~e~Gl~~~te 176 (350)
T 1vr6_A 117 EGREMLMETAHFLSELGVKVLRGGAYKPRTSP-YSFQG---------LGEKGLEYLREAADKYGMYVVTE 176 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEECBSCCCCCST-TSCCC---------CTHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCeeeeeEEeCCCCh-HhhcC---------CCHHHHHHHHHHHHHcCCcEEEE
Confidence 35678888888888999998765 45432 22221 12466788888889999988654
No 136
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=46.05 E-value=46 Score=22.28 Aligned_cols=52 Identities=23% Similarity=0.204 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHCCCcEE-EccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 23 NFATCSRLVKEAASAGAKLL-CFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlv-v~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
+.+...++.+.|.+.|+|-+ +.|=+.. ... ......+.+..+|...+++|++
T Consensus 75 ~t~~ai~la~~A~~~Gadavlv~~P~y~-~~~-----------s~~~l~~~f~~va~a~~lPiil 127 (286)
T 2r91_A 75 NADEAIALAKYAESRGAEAVASLPPYYF-PRL-----------SERQIAKYFRDLCSAVSIPVFL 127 (286)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSCSS-TTC-----------CHHHHHHHHHHHHHHCSSCEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEEcCCcCC-CCC-----------CHHHHHHHHHHHHHhcCCCEEE
Confidence 45566778888888899954 4443332 001 1235667777777776666643
No 137
>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius}
Probab=45.92 E-value=13 Score=26.06 Aligned_cols=65 Identities=12% Similarity=0.201 Sum_probs=33.7
Q ss_pred CCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEe
Q 033342 37 AGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRS 114 (121)
Q Consensus 37 ~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~ 114 (121)
.+++++++=|=+. +-+ ........+.+.++.++.++.+++-+-... .-..+-+..++++ +|+++.
T Consensus 162 ~~P~lLLLDEP~s--~LD--------~~~r~~l~~~l~~l~~~~g~tvi~vTHd~~--~a~~~adri~vl~-~G~i~~ 226 (355)
T 1z47_A 162 PRPQVLLFDEPFA--AID--------TQIRRELRTFVRQVHDEMGVTSVFVTHDQE--EALEVADRVLVLH-EGNVEQ 226 (355)
T ss_dssp TCCSEEEEESTTC--CSS--------HHHHHHHHHHHHHHHHHHTCEEEEECSCHH--HHHHHCSEEEEEE-TTEEEE
T ss_pred cCCCEEEEeCCcc--cCC--------HHHHHHHHHHHHHHHHhcCCEEEEECCCHH--HHHHhCCEEEEEE-CCEEEE
Confidence 4677777777543 111 111224556667777776777765543220 1113345566675 687753
No 138
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=45.80 E-value=45 Score=22.77 Aligned_cols=20 Identities=25% Similarity=0.228 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHCCCcEE
Q 033342 23 NFATCSRLVKEAASAGAKLL 42 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlv 42 (121)
+.+...++.+.|.+.|+|-+
T Consensus 103 st~eai~la~~A~~~Gadav 122 (314)
T 3qze_A 103 STREAVALTEAAKSGGADAC 122 (314)
T ss_dssp SHHHHHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHHHHHcCCCEE
Confidence 45566778888888898853
No 139
>4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron}
Probab=45.63 E-value=73 Score=22.18 Aligned_cols=60 Identities=12% Similarity=-0.040 Sum_probs=36.4
Q ss_pred HHHHHHHHCCCcEEEccCCccCCC---CCCch-hhhcccCCCChHHHHHHHHHHHcCcEEEeccc
Q 033342 29 RLVKEAASAGAKLLCFPENFSYVG---DKDAD-NIKIAEPLDGPIMQGYCSLARESSMWLSLGGF 89 (121)
Q Consensus 29 ~~~~~a~~~~~dlvv~PE~~~~~~---~~~~~-~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~ 89 (121)
+.++.+++.|.+-||+--..- -| |+..- ..........+.++.+.+.|+++|+-+.+|..
T Consensus 58 ~~~~~mK~~GikyvIl~~~~~-~gf~~~pS~~~~~~~~~~p~~Dlv~~~l~aa~k~Gmkv~~Gly 121 (340)
T 4h41_A 58 LDFQHMKRIGIDTVIMIRSGY-RKFMTYPSPYLLKKGCYMPSVDLVDMYLRLAEKYNMKFYFGLY 121 (340)
T ss_dssp HHHHHHHHTTCCEEEESCSEE-TTEESSCCHHHHHTTCCCCSBCHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHcCCCEEEEEEEee-CCeeccCcccccccCccCCcccHHHHHHHHHHHhCCeEEEecC
Confidence 445555677999888754332 12 21110 00111113457799999999999999988853
No 140
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=45.42 E-value=45 Score=22.44 Aligned_cols=20 Identities=20% Similarity=0.117 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHCCCcEE
Q 033342 23 NFATCSRLVKEAASAGAKLL 42 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlv 42 (121)
+.+...++.+.|.+.|+|-+
T Consensus 80 ~t~~ai~la~~A~~~Gadav 99 (294)
T 2ehh_A 80 ATHEAVHLTAHAKEVGADGA 99 (294)
T ss_dssp CHHHHHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHHHHhcCCCEE
Confidence 44566778888888899843
No 141
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=45.20 E-value=59 Score=20.89 Aligned_cols=62 Identities=10% Similarity=-0.028 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 20 LAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 20 ~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
....++.+.+.++.|..-|++.|+++ .. ++........+. ..-+.+..+.+.|+++|+.+.+
T Consensus 79 ~~~~~~~~~~~i~~A~~lG~~~v~~~--~~-p~~~~~~~~~~~--~~~~~l~~l~~~a~~~Gv~l~l 140 (281)
T 3u0h_A 79 FLRELSLLPDRARLCARLGARSVTAF--LW-PSMDEEPVRYIS--QLARRIRQVAVELLPLGMRVGL 140 (281)
T ss_dssp HHHHHHTHHHHHHHHHHTTCCEEEEE--CC-SEESSCHHHHHH--HHHHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEe--ec-CCCCCcchhhHH--HHHHHHHHHHHHHHHcCCEEEE
Confidence 44566778888898999999998843 11 111100000000 1123455667777888887743
No 142
>1ako_A Exonuclease III; AP-endonuclease, DNA repair; 1.70A {Escherichia coli} SCOP: d.151.1.1
Probab=45.10 E-value=23 Score=22.54 Aligned_cols=23 Identities=9% Similarity=0.063 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHCCCcEEEccCCcc
Q 033342 24 FATCSRLVKEAASAGAKLLCFPENFS 49 (121)
Q Consensus 24 ~~~~~~~~~~a~~~~~dlvv~PE~~~ 49 (121)
.+.+.+.++ +.++|||++.|+..
T Consensus 15 ~~~i~~~i~---~~~~Dii~LQE~~~ 37 (268)
T 1ako_A 15 PHQLEAIVE---KHQPDVIGLQETKV 37 (268)
T ss_dssp HHHHHHHHH---HHCCSEEEEECCCC
T ss_pred HHHHHHHHH---HcCCCEEEEEeccC
Confidence 344444444 46899999999875
No 143
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=45.06 E-value=21 Score=19.84 Aligned_cols=18 Identities=22% Similarity=0.374 Sum_probs=14.1
Q ss_pred EEEEEEECCCCCEEeeee
Q 033342 100 CNTHVLLDDAGNIRSTYR 117 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y~ 117 (121)
+-+.++++++|+++..+.
T Consensus 105 ~P~~~lid~~G~i~~~~~ 122 (138)
T 4evm_A 105 YPTQAFIDKEGKLVKTHP 122 (138)
T ss_dssp SSEEEEECTTCCEEEEEE
T ss_pred CCeEEEECCCCcEEEeec
Confidence 457889999999877664
No 144
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=45.01 E-value=52 Score=22.35 Aligned_cols=20 Identities=20% Similarity=0.335 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHCCCcEE
Q 033342 23 NFATCSRLVKEAASAGAKLL 42 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlv 42 (121)
+.+...++.+.|.+.|+|-+
T Consensus 88 ~t~~ai~la~~A~~~Gadav 107 (309)
T 3fkr_A 88 STQVCAARSLRAQQLGAAMV 107 (309)
T ss_dssp SHHHHHHHHHHHHHTTCSEE
T ss_pred hHHHHHHHHHHHHHcCCCEE
Confidence 45566778888888899853
No 145
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=44.72 E-value=35 Score=23.18 Aligned_cols=19 Identities=16% Similarity=0.389 Sum_probs=15.7
Q ss_pred hHHHHHHHHHHHcCcEEEe
Q 033342 68 PIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~ 86 (121)
+.++.+.++|+++++.++.
T Consensus 183 ~~l~~i~~~~~~~~~~li~ 201 (388)
T 1j32_A 183 DEVRAIAQVAVEAGLWVLS 201 (388)
T ss_dssp HHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHcCCEEEE
Confidence 4578899999999988865
No 146
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=44.66 E-value=46 Score=23.94 Aligned_cols=54 Identities=11% Similarity=0.101 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHC--CCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 23 NFATCSRLVKEAASA--GAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 23 n~~~~~~~~~~a~~~--~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
+++.+++.++.+... ++.+|++.-...++|.. .+.+.++.+.++|+++++.++.
T Consensus 220 d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~----------~s~~~l~~i~~la~~~~~~li~ 275 (500)
T 3tcm_A 220 ETSDVKKQLEDARSRGINVRALVVINPGNPTGQV----------LAEENQYDIVKFCKNEGLVLLA 275 (500)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCC----------CCHHHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHHHhcCCCceEEEEECCCCCCccc----------CCHHHHHHHHHHHHHcCCEEEE
Confidence 455666666655444 35566654223334432 2334577888889999988864
No 147
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=44.54 E-value=37 Score=23.53 Aligned_cols=39 Identities=3% Similarity=-0.055 Sum_probs=25.6
Q ss_pred CCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHH-----cCcEEEe
Q 033342 38 GAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARE-----SSMWLSL 86 (121)
Q Consensus 38 ~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~-----~~~~ii~ 86 (121)
++.+|++..-..++|.. .+.+.++.+.++|++ +++.++.
T Consensus 189 ~~~~v~i~~p~nptG~~----------~~~~~l~~i~~~~~~~~~~~~~~~li~ 232 (430)
T 2x5f_A 189 DKVIMILNYPNNPTGYT----------PTHKEVTTIVEAIKALANKGTKVIAVV 232 (430)
T ss_dssp SEEEEEECSSCTTTCCC----------CCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEEcCCCCCCCCc----------CCHHHHHHHHHHHHhhhhccCCEEEEE
Confidence 56777765554434432 233567889999999 8887764
No 148
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=44.54 E-value=46 Score=22.42 Aligned_cols=55 Identities=13% Similarity=0.051 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHCCCcEEEc----cCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEec
Q 033342 23 NFATCSRLVKEAASAGAKLLCF----PENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLG 87 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlvv~----PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G 87 (121)
+.+...+.++.+++.|+|++-| |+++. .+|.. ...+.+..+.+.+++.|+.++.-
T Consensus 50 ~~e~a~~~a~~~k~~ga~~~k~~~~kprts~-~~f~g---------~g~~gl~~l~~~~~~~Gl~~~te 108 (276)
T 1vs1_A 50 SWEQVREAALAVKEAGAHMLRGGAFKPRTSP-YSFQG---------LGLEGLKLLRRAGDEAGLPVVTE 108 (276)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECBSSCCCSST-TSCCC---------CTHHHHHHHHHHHHHHTCCEEEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEeEEEeCCCCh-hhhcC---------CCHHHHHHHHHHHHHcCCcEEEe
Confidence 4567788888888889998766 45432 22211 12456777888888888887654
No 149
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=44.54 E-value=49 Score=22.33 Aligned_cols=20 Identities=30% Similarity=0.290 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHCCCcEE
Q 033342 23 NFATCSRLVKEAASAGAKLL 42 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlv 42 (121)
+.+...++.+.|.+.|+|-+
T Consensus 87 ~t~~ai~la~~a~~~Gadav 106 (297)
T 3flu_A 87 NTVEAIALSQAAEKAGADYT 106 (297)
T ss_dssp SHHHHHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHHHHHcCCCEE
Confidence 45666777888888899854
No 150
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=44.18 E-value=13 Score=23.84 Aligned_cols=42 Identities=7% Similarity=0.159 Sum_probs=22.3
Q ss_pred hHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEe
Q 033342 68 PIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRS 114 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~ 114 (121)
...+.+.+++++ +..+++-+.... .- .+.+..+++. +|+++.
T Consensus 178 ~~~~~l~~l~~~-g~tvi~vtHd~~--~~-~~~d~v~~l~-~G~i~~ 219 (224)
T 2pcj_A 178 RVMDIFLKINEG-GTSIVMVTHERE--LA-ELTHRTLEMK-DGKVVG 219 (224)
T ss_dssp HHHHHHHHHHHT-TCEEEEECSCHH--HH-TTSSEEEEEE-TTEEEE
T ss_pred HHHHHHHHHHHC-CCEEEEEcCCHH--HH-HhCCEEEEEE-CCEEEE
Confidence 344555666555 666655543321 11 3445667775 787753
No 151
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=44.03 E-value=48 Score=22.64 Aligned_cols=20 Identities=30% Similarity=0.373 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHCCCcEE
Q 033342 23 NFATCSRLVKEAASAGAKLL 42 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlv 42 (121)
+.+...++.+.|.+.|+|-+
T Consensus 102 st~~ai~la~~A~~~Gadav 121 (315)
T 3si9_A 102 STSEAVELAKHAEKAGADAV 121 (315)
T ss_dssp SHHHHHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHHHHhcCCCEE
Confidence 45667788888888899853
No 152
>3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A
Probab=44.00 E-value=13 Score=26.41 Aligned_cols=65 Identities=17% Similarity=0.217 Sum_probs=35.1
Q ss_pred CCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEe
Q 033342 37 AGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRS 114 (121)
Q Consensus 37 ~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~ 114 (121)
.+++++++=|=+. + +.........+.+.++.++.++.+++-+-... +--.+-...++++ +|+++.
T Consensus 150 ~~P~lLLLDEPts--~--------LD~~~~~~l~~~l~~l~~~~g~tii~vTHd~~--ea~~~aDri~vl~-~G~i~~ 214 (381)
T 3rlf_A 150 AEPSVFLLDEPLS--N--------LDAALRVQMRIEISRLHKRLGRTMIYVTHDQV--EAMTLADKIVVLD-AGRVAQ 214 (381)
T ss_dssp HCCSEEEEESTTT--T--------SCHHHHHHHHHHHHHHHHHHCCEEEEECSCHH--HHHHHCSEEEEEE-TTEEEE
T ss_pred cCCCEEEEECCCc--C--------CCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH--HHHHhCCEEEEEE-CCEEEE
Confidence 4677777777443 1 11111234566677777777877766543210 1113445666775 687754
No 153
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=43.97 E-value=19 Score=21.24 Aligned_cols=28 Identities=25% Similarity=0.233 Sum_probs=19.0
Q ss_pred cCHHHHHHHHHHHHHHHHHCCCcEEEcc
Q 033342 18 NDLAANFATCSRLVKEAASAGAKLLCFP 45 (121)
Q Consensus 18 ~~~~~n~~~~~~~~~~a~~~~~dlvv~P 45 (121)
..+...+..+.++.++....++++|...
T Consensus 49 ~~C~~~~~~l~~~~~~~~~~~~~vv~vs 76 (163)
T 3gkn_A 49 PGATTEGLDFNALLPEFDKAGAKILGVS 76 (163)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CcHHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 3456667777777776667788877553
No 154
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=43.96 E-value=49 Score=22.21 Aligned_cols=19 Identities=32% Similarity=0.321 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHCCCcE
Q 033342 23 NFATCSRLVKEAASAGAKL 41 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dl 41 (121)
+.+...++.+.|.+.|+|-
T Consensus 80 ~t~~ai~la~~A~~~Gada 98 (292)
T 2vc6_A 80 STAEAIAFVRHAQNAGADG 98 (292)
T ss_dssp SHHHHHHHHHHHHHTTCSE
T ss_pred cHHHHHHHHHHHHHcCCCE
Confidence 4466778888888889984
No 155
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=43.56 E-value=65 Score=20.95 Aligned_cols=64 Identities=11% Similarity=-0.053 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEccCCccCC-CCCC-chhhhcccCCCChHHHHHHHHHHHcCcEEE
Q 033342 21 AANFATCSRLVKEAASAGAKLLCFPENFSYV-GDKD-ADNIKIAEPLDGPIMQGYCSLARESSMWLS 85 (121)
Q Consensus 21 ~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~-~~~~-~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii 85 (121)
+..++.+.+.++.|..-|++.|+.+=..... .+.. .......+ ..-+.+..+.+.|+++|+.+.
T Consensus 84 ~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~l~~~a~~~Gv~l~ 149 (294)
T 3vni_A 84 KNAKAFYTDLLKRLYKLDVHLIGGALYSYWPIDYTKTIDKKGDWE-RSVESVREVAKVAEACGVDFC 149 (294)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEESTTSCSSCCTTSCCCHHHHHH-HHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCeeeccccCCCCCcCCCCCCHHHHHH-HHHHHHHHHHHHHHHcCCEEE
Confidence 4567888888998888899998631000000 0110 00000000 112455667777888888764
No 156
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=43.48 E-value=19 Score=21.98 Aligned_cols=27 Identities=11% Similarity=0.042 Sum_probs=18.0
Q ss_pred CHHHHHHHHHHHHHHHHHCCCcEEEcc
Q 033342 19 DLAANFATCSRLVKEAASAGAKLLCFP 45 (121)
Q Consensus 19 ~~~~n~~~~~~~~~~a~~~~~dlvv~P 45 (121)
.+...+..+.++.++....++++|...
T Consensus 66 ~C~~el~~l~~l~~~~~~~~~~vv~Vs 92 (179)
T 3ixr_A 66 GSSTEGLEFNLLLPQFEQINATVLGVS 92 (179)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred chHHHHHHHHHHHHHHHHCCCEEEEEc
Confidence 356667777777776666777777653
No 157
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=43.31 E-value=27 Score=24.30 Aligned_cols=41 Identities=15% Similarity=0.216 Sum_probs=27.0
Q ss_pred HCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 36 SAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 36 ~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
..++.+|+++.-..++|.. .+.+.++.+.++|+++++.++.
T Consensus 204 ~~~~~~v~i~~p~nptG~~----------~~~~~l~~i~~~a~~~~~~li~ 244 (444)
T 3if2_A 204 EGRIGAICCSRPTNPTGNV----------LTDEEMAHLAEIAKRYDIPLII 244 (444)
T ss_dssp TTCEEEEEEESSCTTTCCC----------CCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCceEEEeCCCCCCCCCc----------CCHHHHHHHHHHHHHCCCEEEE
Confidence 4567777775444434432 2334578899999999987764
No 158
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=43.19 E-value=49 Score=22.18 Aligned_cols=52 Identities=19% Similarity=0.091 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHCCCcEE-EccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 23 NFATCSRLVKEAASAGAKLL-CFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlv-v~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
+.+...++.+.|.+.|+|-+ +.|=+.. .. .......+.+..+|...+++|++
T Consensus 76 ~t~~ai~la~~A~~~Gadavlv~~P~y~-~~-----------~s~~~l~~~f~~va~a~~lPiil 128 (288)
T 2nuw_A 76 NLNDVMELVKFSNEMDILGVSSHSPYYF-PR-----------LPEKFLAKYYEEIARISSHSLYI 128 (288)
T ss_dssp CHHHHHHHHHHHHTSCCSEEEECCCCSS-CS-----------CCHHHHHHHHHHHHHHCCSCEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEEcCCcCC-CC-----------CCHHHHHHHHHHHHHhcCCCEEE
Confidence 44567778888888899954 4343332 00 12345677888888887777654
No 159
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=43.15 E-value=43 Score=22.67 Aligned_cols=20 Identities=25% Similarity=0.317 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHCCCcEE
Q 033342 23 NFATCSRLVKEAASAGAKLL 42 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlv 42 (121)
+.+...++.+.|.+.|+|-+
T Consensus 92 ~t~~ai~la~~A~~~Gadav 111 (301)
T 1xky_A 92 NTHASIDLTKKATEVGVDAV 111 (301)
T ss_dssp CHHHHHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHHHHhcCCCEE
Confidence 44566778888888899843
No 160
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=43.02 E-value=19 Score=21.43 Aligned_cols=18 Identities=17% Similarity=0.375 Sum_probs=14.3
Q ss_pred EEEEEEECCCCCEEeeee
Q 033342 100 CNTHVLLDDAGNIRSTYR 117 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y~ 117 (121)
.-+.++|+++|+++..|.
T Consensus 136 ~p~~~lid~~G~i~~~~~ 153 (174)
T 1xzo_A 136 QSSFYLVGPDGKVLKDYN 153 (174)
T ss_dssp CCEEEEECTTSEEEEEEE
T ss_pred eeEEEEECCCCeEEEEEc
Confidence 346799999999987664
No 161
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=42.96 E-value=21 Score=24.18 Aligned_cols=19 Identities=16% Similarity=0.125 Sum_probs=15.2
Q ss_pred hHHHHHHHHHHHcCcEEEe
Q 033342 68 PIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~ 86 (121)
+.+..+.++|+++++.++.
T Consensus 174 ~~l~~i~~~~~~~~~~li~ 192 (376)
T 3ezs_A 174 EELISWVKLALKHDFILIN 192 (376)
T ss_dssp HHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHcCcEEEE
Confidence 4578888899999988864
No 162
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=42.95 E-value=64 Score=20.65 Aligned_cols=56 Identities=13% Similarity=-0.000 Sum_probs=35.8
Q ss_pred cEEEEEEeccccCHHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEE
Q 033342 7 VRVAVAQMTSINDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLS 85 (121)
Q Consensus 7 ~~ia~vQ~~~~~~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii 85 (121)
+++..+..... ..++.+.+.++.|..-|++.|+++ ++ .+.+..+.+.|+++|+.+.
T Consensus 75 l~i~~~~~~~~----~~~~~~~~~i~~A~~lGa~~v~~~-----p~--------------~~~l~~l~~~a~~~gv~l~ 130 (257)
T 3lmz_A 75 VTGYAVGPIYM----KSEEEIDRAFDYAKRVGVKLIVGV-----PN--------------YELLPYVDKKVKEYDFHYA 130 (257)
T ss_dssp CEEEEEEEEEE----CSHHHHHHHHHHHHHHTCSEEEEE-----EC--------------GGGHHHHHHHHHHHTCEEE
T ss_pred CeEEEEecccc----CCHHHHHHHHHHHHHhCCCEEEec-----CC--------------HHHHHHHHHHHHHcCCEEE
Confidence 45555444322 345677777888888888888763 11 1345678888888888764
No 163
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=42.71 E-value=75 Score=21.39 Aligned_cols=46 Identities=15% Similarity=0.133 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHCCCc-EEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEec
Q 033342 25 ATCSRLVKEAASAGAK-LLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLG 87 (121)
Q Consensus 25 ~~~~~~~~~a~~~~~d-lvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G 87 (121)
+...+.++++.+.|+. +|++++.+. . .-.+.+.+.|+++++.++.+
T Consensus 81 ~~~~~~v~ea~~~Gi~~vVi~t~G~~-----~------------~~~~~l~~~A~~~gi~viGP 127 (294)
T 2yv1_A 81 PFAKDAVFEAIDAGIELIVVITEHIP-----V------------HDTMEFVNYAEDVGVKIIGP 127 (294)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCSCCC-----H------------HHHHHHHHHHHHHTCEEECS
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCC-----H------------HHHHHHHHHHHHcCCEEEcC
Confidence 3556677777778888 565666442 0 12567888999999977533
No 164
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=42.60 E-value=24 Score=24.30 Aligned_cols=19 Identities=11% Similarity=0.018 Sum_probs=15.9
Q ss_pred hHHHHHHHHHHHcCcEEEe
Q 033342 68 PIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~ 86 (121)
+.++.+.++|+++++.++.
T Consensus 194 ~~l~~i~~~~~~~~~~li~ 212 (422)
T 3fvs_A 194 EELELVASLCQQHDVVCIT 212 (422)
T ss_dssp HHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHcCcEEEE
Confidence 4688899999999998864
No 165
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=42.53 E-value=47 Score=23.72 Aligned_cols=29 Identities=10% Similarity=-0.001 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEccCCcc
Q 033342 20 LAANFATCSRLVKEAASAGAKLLCFPENFS 49 (121)
Q Consensus 20 ~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~ 49 (121)
.++-.+-+.++++...+.|+|++++ |+..
T Consensus 134 ~eel~~~~~eqi~~L~~~GvDlll~-ETi~ 162 (406)
T 1lt8_A 134 ETEVKKVFLQQLEVFMKKNVDFLIA-EYFE 162 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEE-CCCS
T ss_pred HHHHHHHHHHHHHHHhhCCCCEEEE-cccC
Confidence 4556666667776666789999876 5554
No 166
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=42.31 E-value=53 Score=19.51 Aligned_cols=58 Identities=10% Similarity=0.107 Sum_probs=34.0
Q ss_pred CHHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEE
Q 033342 19 DLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLS 85 (121)
Q Consensus 19 ~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii 85 (121)
+.+...+.+.++++.+.+.++.+++..= .+++.+.. . ....+.+.+.++|+++++.++
T Consensus 84 ~~~~~~~~~~~~i~~~~~~~~~vvl~~~-~~p~~~~~----~----~~~~~~~~~~~~a~~~~~~~v 141 (185)
T 3hp4_A 84 PVKKMQTNLTALVKKSQAANAMTALMEI-YIPPNYGP----R----YSKMFTSSFTQISEDTNAHLM 141 (185)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEECC-CCCSTTCH----H----HHHHHHHHHHHHHHHHCCEEE
T ss_pred CHHHHHHHHHHHHHHHHHcCCeEEEEeC-CCCCcccH----H----HHHHHHHHHHHHHHHcCCEEE
Confidence 4455556666666666667888876521 11111111 1 113566778889999998875
No 167
>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}
Probab=42.29 E-value=48 Score=19.06 Aligned_cols=45 Identities=7% Similarity=0.005 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEee
Q 033342 69 IMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRST 115 (121)
Q Consensus 69 ~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~~ 115 (121)
-++.+.+.+++.++.+..+..... .......++++.+|+|..+..
T Consensus 100 dl~~~~~~l~~~G~~~~~~p~~~~--~~~g~~~~~~~~DPdGn~iEl 144 (147)
T 3zw5_A 100 PLEEMIQHLKACDVPIEEGPVPRT--GAKGPIMSIYFRDPDRNLIEV 144 (147)
T ss_dssp CHHHHHHHHHHTTCCCCEEEEEEE--ETTEEEEEEEEECTTCCEEEE
T ss_pred CHHHHHHHHHHcCCceeeCccccc--CCCCceEEEEEECCCCCEEEE
Confidence 355566666777887654422221 222234577899999987643
No 168
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=42.26 E-value=22 Score=21.03 Aligned_cols=18 Identities=28% Similarity=0.541 Sum_probs=14.6
Q ss_pred EEEEEEECCCCCEEeeee
Q 033342 100 CNTHVLLDDAGNIRSTYR 117 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y~ 117 (121)
.-+.++++++|+++..|.
T Consensus 111 ~P~~~lid~~G~i~~~~~ 128 (161)
T 3drn_A 111 ARITFVIDKKGIIRHIYN 128 (161)
T ss_dssp CCEEEEECTTSBEEEEEE
T ss_pred cceEEEECCCCEEEEEEe
Confidence 457899999999987664
No 169
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=42.25 E-value=88 Score=22.54 Aligned_cols=53 Identities=11% Similarity=0.110 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHCCCc-EEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEec
Q 033342 24 FATCSRLVKEAASAGAK-LLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLG 87 (121)
Q Consensus 24 ~~~~~~~~~~a~~~~~d-lvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G 87 (121)
-+...+.++++.+.|+. +|+++|.+.-.+. ......+.+.+.|+++++.++..
T Consensus 74 ~~~~~~~v~e~~~~Gi~~vv~~s~G~~e~g~-----------~g~~~~~~l~~~a~~~g~~viGP 127 (457)
T 2csu_A 74 KRFVKDTLIQCGEKGVKGVVIITAGFGETGE-----------EGKREEKELVEIAHKYGMRIIGP 127 (457)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCSSTTSCH-----------HHHHHHHHHHHHHHHHTCEEECS
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCCCcccc-----------ccHHHHHHHHHHHHHcCCEEEcC
Confidence 35666777777777888 5778887740010 00123567888999999988643
No 170
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=42.18 E-value=23 Score=20.96 Aligned_cols=103 Identities=8% Similarity=0.100 Sum_probs=48.8
Q ss_pred EEEEEEecc-c-cC-HHHHHHHHHHHHHHHHH----CCCcEEEccCCccCCCC-CCchhhhcccCCCC------hHHHHH
Q 033342 8 RVAVAQMTS-I-ND-LAANFATCSRLVKEAAS----AGAKLLCFPENFSYVGD-KDADNIKIAEPLDG------PIMQGY 73 (121)
Q Consensus 8 ~ia~vQ~~~-~-~~-~~~n~~~~~~~~~~a~~----~~~dlvv~PE~~~~~~~-~~~~~~~~~~~~~~------~~~~~l 73 (121)
|+.++-+-. + .. +...+..+.++.++..+ .++.+|...=- ... ..+.+..+...... ...+..
T Consensus 27 k~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d---~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~ 103 (171)
T 2rli_A 27 QWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVD---PERDDVEAMARYVQDFHPRLLGLTGSTKQV 103 (171)
T ss_dssp SEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESC---STTCCHHHHHHHHHTTCTTCCEEECCHHHH
T ss_pred CEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEEC---CCCCCHHHHHHHHHHcCCCeEEEeCCHHHH
Confidence 344555443 3 55 77777777777766544 35665554210 000 01111111111000 012344
Q ss_pred HHHHHHcCcEEEeccceeecCCCCc----eEEEEEEECCCCCEEeeee
Q 033342 74 CSLARESSMWLSLGGFQEKGSDDAR----LCNTHVLLDDAGNIRSTYR 117 (121)
Q Consensus 74 ~~~a~~~~~~ii~G~~~~~~~~~~~----~~Ns~~~i~~~G~i~~~y~ 117 (121)
..+++.+++...-. .. ...+. ...+.++|+++|+++..|.
T Consensus 104 ~~~~~~~~v~~~p~--~~--~~~~~~~~~~~~~~~lid~~G~i~~~~~ 147 (171)
T 2rli_A 104 AQASHSYRVYYNAG--PK--DEDQDYIVDHSIAIYLLNPDGLFTDYYG 147 (171)
T ss_dssp HHHHHHSCCCCEEC--CC--CSSCCCCEECCCEEEEECTTSCEEEEEE
T ss_pred HHHHHHhCeEEEec--CC--CCCCCeEEeccceEEEECCCCeEEEEEC
Confidence 56777777643221 01 01111 1237899999999987764
No 171
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=42.05 E-value=53 Score=22.01 Aligned_cols=20 Identities=10% Similarity=0.218 Sum_probs=10.5
Q ss_pred HHHHHHHHHCCCcEEEccCC
Q 033342 28 SRLVKEAASAGAKLLCFPEN 47 (121)
Q Consensus 28 ~~~~~~a~~~~~dlvv~PE~ 47 (121)
.++++.+++.|+|-++.|-+
T Consensus 115 ~~f~~~~~~aGvdGvIipDl 134 (271)
T 3nav_A 115 DDFYQRCQKAGVDSVLIADV 134 (271)
T ss_dssp HHHHHHHHHHTCCEEEETTS
T ss_pred HHHHHHHHHCCCCEEEECCC
Confidence 34444455556666655543
No 172
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=42.02 E-value=54 Score=22.20 Aligned_cols=50 Identities=24% Similarity=0.275 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHCCCcEE-EccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEE
Q 033342 23 NFATCSRLVKEAASAGAKLL-CFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLS 85 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlv-v~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii 85 (121)
+.+...++.+.|.+.|+|-+ +.|=+.. .. ......+.+..+|...+++|+
T Consensus 96 st~~ai~la~~A~~~Gadavlv~~P~y~--~~-----------~~~~l~~~f~~ia~a~~lPii 146 (304)
T 3cpr_A 96 NTRTSVELAEAAASAGADGLLVVTPYYS--KP-----------SQEGLLAHFGAIAAATEVPIC 146 (304)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCSS--CC-----------CHHHHHHHHHHHHHHCCSCEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEECCCCCC--CC-----------CHHHHHHHHHHHHHhcCCCEE
Confidence 45567777888888899843 3343332 11 123445566666665555553
No 173
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=41.99 E-value=27 Score=24.53 Aligned_cols=19 Identities=0% Similarity=-0.024 Sum_probs=16.0
Q ss_pred hHHHHHHHHHHHcCcEEEe
Q 033342 68 PIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~ 86 (121)
+.++.+.++|+++++.++.
T Consensus 221 ~~l~~i~~l~~~~~~~li~ 239 (447)
T 3b46_A 221 EELTTLGNICVKHNVVIIS 239 (447)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHcCcEEEE
Confidence 5688899999999998864
No 174
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=41.94 E-value=21 Score=21.55 Aligned_cols=15 Identities=7% Similarity=0.328 Sum_probs=11.8
Q ss_pred EEEEECCCCCEEeee
Q 033342 102 THVLLDDAGNIRSTY 116 (121)
Q Consensus 102 s~~~i~~~G~i~~~y 116 (121)
++++|+++|.+...+
T Consensus 123 ~tflID~~G~I~~~~ 137 (164)
T 4gqc_A 123 AVFIVKPDGTVAYKW 137 (164)
T ss_dssp EEEEECTTSBEEEEE
T ss_pred EEEEECCCCEEEEEE
Confidence 579999999986543
No 175
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=41.87 E-value=45 Score=22.78 Aligned_cols=21 Identities=29% Similarity=0.205 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHCCCcEEE
Q 033342 23 NFATCSRLVKEAASAGAKLLC 43 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlvv 43 (121)
+.+...++.+.|.+.|+|-++
T Consensus 104 ~t~~ai~la~~A~~~Gadavl 124 (315)
T 3na8_A 104 TTAKTVRRAQFAESLGAEAVM 124 (315)
T ss_dssp SHHHHHHHHHHHHHTTCSEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEE
Confidence 456677888888888998533
No 176
>1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 2d62_A
Probab=41.86 E-value=17 Score=25.56 Aligned_cols=66 Identities=9% Similarity=0.100 Sum_probs=33.9
Q ss_pred HCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEe
Q 033342 36 SAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRS 114 (121)
Q Consensus 36 ~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~ 114 (121)
..+++++++=|=+. +-+ ........+.+.++.++.++.+++-+.... .-..+-+..++++ +|+++.
T Consensus 155 ~~~P~lLLLDEP~s--~LD--------~~~r~~l~~~l~~l~~~~g~tvi~vTHd~~--~a~~~adri~vl~-~G~i~~ 220 (372)
T 1g29_1 155 VRKPQVFLMDEPLS--NLD--------AKLRVRMRAELKKLQRQLGVTTIYVTHDQV--EAMTMGDRIAVMN-RGVLQQ 220 (372)
T ss_dssp HTCCSEEEEECTTT--TSC--------HHHHHHHHHHHHHHHHHHTCEEEEEESCHH--HHHHHCSEEEEEE-TTEEEE
T ss_pred hcCCCEEEECCCCc--cCC--------HHHHHHHHHHHHHHHHhcCCEEEEECCCHH--HHHHhCCEEEEEe-CCEEEE
Confidence 34677777777553 111 111224555666776776776665543210 1112345566665 687753
No 177
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=41.79 E-value=17 Score=24.34 Aligned_cols=65 Identities=8% Similarity=0.042 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEccCCccCCC-CCCchhhhcccCCCChHHHHHHHHHHHcCcE-EE
Q 033342 21 AANFATCSRLVKEAASAGAKLLCFPENFSYVG-DKDADNIKIAEPLDGPIMQGYCSLARESSMW-LS 85 (121)
Q Consensus 21 ~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~-ii 85 (121)
+..++.+.+.++.|..-|++.|+.|=.....+ +.............-+.+..+.+.|+++|+. +.
T Consensus 110 ~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~l~ 176 (316)
T 3qxb_A 110 SLGYQHLKRAIDMTAAMEVPATGMPFGSYSAADALNPARREEIYAIARDMWIELAAYAKRQGLSMLY 176 (316)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEECCBBCCHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEecCCCcCccccCCcccHHHHHHHHHHHHHHHHHHHHhcCCeEEE
Confidence 45678888899999999999998764331001 0100000000001123456667778888887 54
No 178
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J*
Probab=41.70 E-value=16 Score=24.24 Aligned_cols=64 Identities=19% Similarity=0.209 Sum_probs=31.4
Q ss_pred CCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEe
Q 033342 37 AGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRS 114 (121)
Q Consensus 37 ~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~ 114 (121)
.+++++++=|=+. +-+. .....+.+.+.+++++ +..+++-+-... .-..+.+..+++. +|+++.
T Consensus 176 ~~p~lllLDEPts--~LD~--------~~~~~~~~~l~~l~~~-g~tvi~vtHd~~--~~~~~~d~v~~l~-~G~i~~ 239 (263)
T 2olj_A 176 MEPKIMLFDEPTS--ALDP--------EMVGEVLSVMKQLANE-GMTMVVVTHEMG--FAREVGDRVLFMD-GGYIIE 239 (263)
T ss_dssp TCCSEEEEESTTT--TSCH--------HHHHHHHHHHHHHHHT-TCEEEEECSCHH--HHHHHCSEEEEEE-TTEEEE
T ss_pred CCCCEEEEeCCcc--cCCH--------HHHHHHHHHHHHHHhC-CCEEEEEcCCHH--HHHHhCCEEEEEE-CCEEEE
Confidence 4566776666543 1110 0112345556666555 666655543210 1112445666775 687753
No 179
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=41.48 E-value=18 Score=21.94 Aligned_cols=15 Identities=20% Similarity=0.488 Sum_probs=12.8
Q ss_pred EEEECCCCCEEeeee
Q 033342 103 HVLLDDAGNIRSTYR 117 (121)
Q Consensus 103 ~~~i~~~G~i~~~y~ 117 (121)
.++|+++|+++..|.
T Consensus 139 ~~lid~~G~i~~~~~ 153 (180)
T 3kij_A 139 KYLVNPEGQVVKFWR 153 (180)
T ss_dssp EEEECTTSCEEEEEC
T ss_pred EEEECCCCCEEEEEC
Confidence 799999999987763
No 180
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=41.29 E-value=19 Score=25.16 Aligned_cols=21 Identities=10% Similarity=0.002 Sum_probs=16.5
Q ss_pred CChHHHHHHHHHHHcCcEEEe
Q 033342 66 DGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 66 ~~~~~~~l~~~a~~~~~~ii~ 86 (121)
+.+.++.+.++|+++++.++.
T Consensus 209 ~~~~l~~i~~~~~~~~~~~i~ 229 (427)
T 3dyd_A 209 SKRHLQKILAVAARQCVPILA 229 (427)
T ss_dssp CHHHHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEE
Confidence 345588899999999987764
No 181
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=41.26 E-value=30 Score=23.51 Aligned_cols=19 Identities=21% Similarity=0.333 Sum_probs=15.6
Q ss_pred hHHHHHHHHHHHcCcEEEe
Q 033342 68 PIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~ 86 (121)
+.++.+.++|+++++.++.
T Consensus 172 ~~l~~i~~~~~~~~~~li~ 190 (381)
T 1v2d_A 172 RELEAIARLARAHDLFLIS 190 (381)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHcCCEEEE
Confidence 4578899999999988864
No 182
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=41.19 E-value=44 Score=22.41 Aligned_cols=20 Identities=20% Similarity=0.094 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHCCCcEE
Q 033342 23 NFATCSRLVKEAASAGAKLL 42 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlv 42 (121)
+.+...++.+.|.+.|+|-+
T Consensus 80 ~t~~ai~la~~a~~~Gadav 99 (289)
T 2yxg_A 80 CTEEAIELSVFAEDVGADAV 99 (289)
T ss_dssp SHHHHHHHHHHHHHHTCSEE
T ss_pred CHHHHHHHHHHHHhcCCCEE
Confidence 44566777787878899843
No 183
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=41.11 E-value=92 Score=21.95 Aligned_cols=58 Identities=9% Similarity=-0.052 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 21 AANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 21 ~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
.+.++...+.++++...+...+|+=|-....+-. ...+.++++.+.++|+++++.++.
T Consensus 207 ~~~~~~~~~~l~~~i~~~~~aavi~ep~~~~gG~--------~~~~~~~l~~l~~l~~~~~~llI~ 264 (453)
T 4ffc_A 207 EEAARRAISRIETQIGAQSLAAIIIEPIQGEGGF--------IVPAPGFLATLTAWASENGVVFIA 264 (453)
T ss_dssp HHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTS--------BCCCTTHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEEcCCCCCCCc--------ccCCHHHHHHHHHHHHHcCCEEEE
Confidence 4566666666665532222223333443312110 113567899999999999998864
No 184
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=41.11 E-value=46 Score=22.67 Aligned_cols=50 Identities=16% Similarity=0.046 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHCCCcEEE-ccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEE
Q 033342 23 NFATCSRLVKEAASAGAKLLC-FPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLS 85 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlvv-~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii 85 (121)
+.+...++.+.|.+.|+|-++ .|=+.. .. ......+.+..+|...+++|+
T Consensus 91 st~~ai~la~~A~~~Gadavlv~~P~y~--~~-----------s~~~l~~~f~~va~a~~lPii 141 (314)
T 3d0c_A 91 SVDTAIELGKSAIDSGADCVMIHQPVHP--YI-----------TDAGAVEYYRNIIEALDAPSI 141 (314)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCCCCS--CC-----------CHHHHHHHHHHHHHHSSSCEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCC--CC-----------CHHHHHHHHHHHHHhCCCCEE
Confidence 455677888888888999543 333222 11 123456666777766555553
No 185
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=41.08 E-value=43 Score=22.65 Aligned_cols=19 Identities=21% Similarity=0.055 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHCCCcE
Q 033342 23 NFATCSRLVKEAASAGAKL 41 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dl 41 (121)
+.+...++.+.|.+.|+|-
T Consensus 84 ~t~~ai~la~~a~~~Gada 102 (300)
T 3eb2_A 84 SVADAVAQAKLYEKLGADG 102 (300)
T ss_dssp SHHHHHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHHHHHHcCCCE
Confidence 3456677778887888884
No 186
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=41.02 E-value=41 Score=22.94 Aligned_cols=19 Identities=5% Similarity=0.228 Sum_probs=14.5
Q ss_pred hHHHHHHHHHHH------cCcEEEe
Q 033342 68 PIMQGYCSLARE------SSMWLSL 86 (121)
Q Consensus 68 ~~~~~l~~~a~~------~~~~ii~ 86 (121)
+.+..+.++|++ +++.++.
T Consensus 192 ~~l~~l~~~~~~~~~~~~~~~~li~ 216 (398)
T 3ele_A 192 ETIKKLSDLLEKKSKEIGRPIFIIA 216 (398)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCEEEE
T ss_pred HHHHHHHHHHHhhhhccCCCeEEEE
Confidence 447778888888 8888764
No 187
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=40.95 E-value=39 Score=22.19 Aligned_cols=53 Identities=11% Similarity=0.152 Sum_probs=33.3
Q ss_pred HHHHHHHHHHCCCcEEEccCCccC----CC-CCCchhhhcccCCCChHHHHHHHHHHHcCcEEEec
Q 033342 27 CSRLVKEAASAGAKLLCFPENFSY----VG-DKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLG 87 (121)
Q Consensus 27 ~~~~~~~a~~~~~dlvv~PE~~~~----~~-~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G 87 (121)
..+.++++.+.|+++|.+=|-... +| ....+ .-.....+.++++++++.+++.
T Consensus 45 ~~~~~~~al~~Gv~~vqlR~K~~~~~~~~~~l~~~~--------~~~~a~~l~~l~~~~~~~liIn 102 (243)
T 3o63_A 45 LAQFAEAALAGGVDIIQLRDKGSPGELRFGPLQARD--------ELAACEILADAAHRYGALFAVN 102 (243)
T ss_dssp HHHHHHHHHHTTCSEEEECCTTCHHHHHHCSCCHHH--------HHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHCCCCEEEEccCCCCccccccCCCHHH--------HHHHHHHHHHHHHhhCCEEEEe
Confidence 566677777889999998775420 01 00000 0123467888899999888774
No 188
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=40.93 E-value=86 Score=21.55 Aligned_cols=47 Identities=23% Similarity=0.217 Sum_probs=25.1
Q ss_pred HHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCc
Q 033342 31 VKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSM 82 (121)
Q Consensus 31 ~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~ 82 (121)
++...+.|+|.|.+.+.+. ....++.+.++ .-++...+.+..++.++
T Consensus 199 ~~~~~~aGad~i~i~D~~~-~~lsp~~f~ef----~~p~~~~i~~~i~~~g~ 245 (359)
T 2inf_A 199 VKAQIKAGAKAIQIFDSWV-GALNQADYRTY----IKPVMNRIFSELAKENV 245 (359)
T ss_dssp HHHHHHTTCSEEEEECTTG-GGSCHHHHHHH----THHHHHHHHHHHGGGCS
T ss_pred HHHHHHhCCCEEEEeCCcc-ccCCHHHHHHH----hHHHHHHHHHHHHHcCC
Confidence 3334467999999999865 22222222222 23455555555554443
No 189
>2it1_A 362AA long hypothetical maltose/maltodextrin transport ATP-binding protein; structural genomics, NPPSFA; 1.94A {Pyrococcus horikoshii}
Probab=40.88 E-value=16 Score=25.66 Aligned_cols=44 Identities=9% Similarity=0.133 Sum_probs=24.2
Q ss_pred hHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEe
Q 033342 68 PIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRS 114 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~ 114 (121)
...+.+.++.++.++.+++-+.... .--.+-+..++++ +|+++.
T Consensus 171 ~l~~~l~~l~~~~g~tvi~vTHd~~--~a~~~adri~vl~-~G~i~~ 214 (362)
T 2it1_A 171 EVRAELKRLQKELGITTVYVTHDQA--EALAMADRIAVIR-EGEILQ 214 (362)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESCHH--HHHHHCSEEEEEE-TTEEEE
T ss_pred HHHHHHHHHHHhCCCEEEEECCCHH--HHHHhCCEEEEEE-CCEEEE
Confidence 4556666776666776665543210 1113445566675 687753
No 190
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=40.77 E-value=53 Score=21.94 Aligned_cols=21 Identities=14% Similarity=0.195 Sum_probs=13.4
Q ss_pred HHHHHHHHHCCCcEEEccCCc
Q 033342 28 SRLVKEAASAGAKLLCFPENF 48 (121)
Q Consensus 28 ~~~~~~a~~~~~dlvv~PE~~ 48 (121)
.++++.+++.|+|-++.|-+.
T Consensus 113 e~f~~~~~~aGvdgvii~Dlp 133 (267)
T 3vnd_A 113 DEFYTKAQAAGVDSVLIADVP 133 (267)
T ss_dssp HHHHHHHHHHTCCEEEETTSC
T ss_pred HHHHHHHHHcCCCEEEeCCCC
Confidence 455566666677777777544
No 191
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=40.63 E-value=22 Score=21.19 Aligned_cols=18 Identities=17% Similarity=0.344 Sum_probs=14.7
Q ss_pred eEEEEEEECCCCCEEeee
Q 033342 99 LCNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 99 ~~Ns~~~i~~~G~i~~~y 116 (121)
..-+.++|+++|+++..+
T Consensus 129 ~~p~~~liD~~G~i~~~~ 146 (165)
T 1q98_A 129 TSRAVIVLDEQNNVLHSQ 146 (165)
T ss_dssp BCCEEEEECTTSBEEEEE
T ss_pred cceeEEEEcCCCEEEEEE
Confidence 346889999999998776
No 192
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=40.57 E-value=78 Score=20.98 Aligned_cols=53 Identities=15% Similarity=0.080 Sum_probs=31.9
Q ss_pred HHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEecc
Q 033342 28 SRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGG 88 (121)
Q Consensus 28 ~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~ 88 (121)
.+.+++|.+.++|+|+.-.-.++.+... . ............+.++++.+..-.
T Consensus 49 ~~vi~eAi~~gadlIitHHP~~f~~~~~-----~---~~~~~~~~~i~~li~~~I~lya~H 101 (267)
T 2fyw_A 49 EETVAEAIEKGVDLIIVKHAPIFRPIKD-----L---LASRPQNQIYIDLIKHDIAVYVSH 101 (267)
T ss_dssp HHHHHHHHHTTCSEEEESSCSCCSCCCC-----C---CTTSHHHHHHHHHHHTTCEEEECS
T ss_pred HHHHHHHHHCCCCEEEECCccccCCccc-----c---ccCchHHHHHHHHHHCCCeEEEee
Confidence 4566888899999999988665222110 0 112234445555667778776554
No 193
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=40.41 E-value=41 Score=22.63 Aligned_cols=19 Identities=16% Similarity=0.134 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHCCCcE
Q 033342 23 NFATCSRLVKEAASAGAKL 41 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dl 41 (121)
+.+...++.+.|.+.|+|-
T Consensus 82 ~t~~ai~la~~a~~~Gada 100 (292)
T 3daq_A 82 DTEKSIQASIQAKALGADA 100 (292)
T ss_dssp CHHHHHHHHHHHHHHTCSE
T ss_pred cHHHHHHHHHHHHHcCCCE
Confidence 4556677777787788884
No 194
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=40.36 E-value=23 Score=21.01 Aligned_cols=17 Identities=24% Similarity=0.290 Sum_probs=14.2
Q ss_pred EEEEEEECCCCCEEeee
Q 033342 100 CNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y 116 (121)
.-+.++|+++|+++..+
T Consensus 126 ~p~~~liD~~G~i~~~~ 142 (163)
T 1psq_A 126 ARAVFVLDTDNTIRYVE 142 (163)
T ss_dssp CCEEEEECTTCBEEEEE
T ss_pred EEEEEEEcCCCeEEEEE
Confidence 36889999999998766
No 195
>2pk8_A Uncharacterized protein PF0899; structural genomics, uncharacte protein, PSI, protein structure initiative; 1.85A {Pyrococcus furiosus dsm 3638} SCOP: d.274.1.1
Probab=40.21 E-value=40 Score=19.00 Aligned_cols=28 Identities=18% Similarity=0.291 Sum_probs=15.7
Q ss_pred cCHHHHHHHHHHHHHHHHHCC--CcEEEcc
Q 033342 18 NDLAANFATCSRLVKEAASAG--AKLLCFP 45 (121)
Q Consensus 18 ~~~~~n~~~~~~~~~~a~~~~--~dlvv~P 45 (121)
+|...-++.+.+.+.+.+.+| +|+|++-
T Consensus 13 gdlirIl~~ieekinELk~dG~ePDIiL~G 42 (103)
T 2pk8_A 13 GDLIRILGEIEEKMNELKMDGFNPDIILFG 42 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCEEEEC
T ss_pred ccHHHHHHHHHHHHHHHHhcCCCCCeEEEc
Confidence 444444555555555555554 8887763
No 196
>2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima}
Probab=40.14 E-value=17 Score=25.39 Aligned_cols=67 Identities=13% Similarity=0.129 Sum_probs=35.1
Q ss_pred HHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEe
Q 033342 35 ASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRS 114 (121)
Q Consensus 35 ~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~ 114 (121)
...+++++++=|=+. +-+ ........+.+.++.++.++.+++-+.... .--.+-+..++++ +|+++.
T Consensus 148 L~~~P~lLLLDEP~s--~LD--------~~~r~~l~~~l~~l~~~~g~tvi~vTHd~~--~~~~~adri~vl~-~G~i~~ 214 (359)
T 2yyz_A 148 LVKQPKVLLFDEPLS--NLD--------ANLRMIMRAEIKHLQQELGITSVYVTHDQA--EAMTMASRIAVFN-QGKLVQ 214 (359)
T ss_dssp HTTCCSEEEEESTTT--TSC--------HHHHHHHHHHHHHHHHHHCCEEEEEESCHH--HHHHHCSEEEEEE-TTEEEE
T ss_pred HHcCCCEEEEECCcc--cCC--------HHHHHHHHHHHHHHHHhcCCEEEEEcCCHH--HHHHhCCEEEEEE-CCEEEE
Confidence 345677777777554 111 111224556666777776776665543210 1112345566665 687753
No 197
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=40.13 E-value=19 Score=22.75 Aligned_cols=17 Identities=6% Similarity=-0.039 Sum_probs=10.4
Q ss_pred CCCCcccEEEEEEeccc
Q 033342 1 MAGAHSVRVAVAQMTSI 17 (121)
Q Consensus 1 ~~~~~~~~ia~vQ~~~~ 17 (121)
|+.|++|||.++.....
T Consensus 1 m~~M~~mkIl~I~GS~r 17 (199)
T 4hs4_A 1 MTTTSPLHFVTLLGSLR 17 (199)
T ss_dssp ----CCEEEEEEECCCS
T ss_pred CCCCCCCEEEEEEcCCC
Confidence 66677789988887764
No 198
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=40.02 E-value=19 Score=23.05 Aligned_cols=16 Identities=13% Similarity=0.148 Sum_probs=14.0
Q ss_pred EEEEECCCCCEEeeee
Q 033342 102 THVLLDDAGNIRSTYR 117 (121)
Q Consensus 102 s~~~i~~~G~i~~~y~ 117 (121)
+.++|+++|+++.+|.
T Consensus 179 ttfLID~~G~vv~~~~ 194 (215)
T 2i3y_A 179 EKFLVGPDGIPVMRWS 194 (215)
T ss_dssp CEEEECTTSCEEEEEC
T ss_pred eEEEECCCCeEEEEeC
Confidence 6899999999988774
No 199
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=39.88 E-value=20 Score=21.11 Aligned_cols=16 Identities=25% Similarity=0.468 Sum_probs=13.6
Q ss_pred EEEEECCCCCEEeeee
Q 033342 102 THVLLDDAGNIRSTYR 117 (121)
Q Consensus 102 s~~~i~~~G~i~~~y~ 117 (121)
+.++|+++|+++..|.
T Consensus 135 ~~~lid~~G~i~~~~~ 150 (169)
T 2v1m_A 135 SKFLVDRQGQPVKRYS 150 (169)
T ss_dssp CEEEECTTSCEEEEEC
T ss_pred eEEEECCCCCEEEEcC
Confidence 7899999999987663
No 200
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=39.84 E-value=49 Score=22.22 Aligned_cols=50 Identities=18% Similarity=0.173 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHCCCcEEE-ccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEE
Q 033342 23 NFATCSRLVKEAASAGAKLLC-FPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLS 85 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlvv-~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii 85 (121)
+.+...++.+.|.+.|+|-++ .|=+.. .. ......+.+..+|...+++|+
T Consensus 81 ~t~~ai~la~~a~~~Gadavlv~~P~y~--~~-----------~~~~l~~~f~~ia~a~~lPii 131 (291)
T 3tak_A 81 STREAIELTKAAKDLGADAALLVTPYYN--KP-----------TQEGLYQHYKAIAEAVELPLI 131 (291)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEECCCSS--CC-----------CHHHHHHHHHHHHHHCCSCEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEEcCCCCC--CC-----------CHHHHHHHHHHHHHhcCCCEE
Confidence 355666777777778888533 222221 11 123455666666666555554
No 201
>3fvq_A Fe(3+) IONS import ATP-binding protein FBPC; nucleotide binding domain, ABC motor domain, ferric iron TRA ATP-binding, cell inner membrane; HET: ATP; 1.90A {Neisseria gonorrhoeae}
Probab=39.74 E-value=21 Score=25.04 Aligned_cols=66 Identities=15% Similarity=0.221 Sum_probs=34.3
Q ss_pred HCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEe
Q 033342 36 SAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRS 114 (121)
Q Consensus 36 ~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~ 114 (121)
..+++++++=|=+. +-+ ........+.+.++.++.++.+++-+-... .--.+-+..++++ +|+++.
T Consensus 154 ~~~P~lLLLDEPts--~LD--------~~~r~~l~~~l~~~~~~~g~tvi~vTHd~~--ea~~~aDri~vl~-~G~i~~ 219 (359)
T 3fvq_A 154 APDPELILLDEPFS--ALD--------EQLRRQIREDMIAALRANGKSAVFVSHDRE--EALQYADRIAVMK-QGRILQ 219 (359)
T ss_dssp TTCCSEEEEESTTT--TSC--------HHHHHHHHHHHHHHHHHTTCEEEEECCCHH--HHHHHCSEEEEEE-TTEEEE
T ss_pred HcCCCEEEEeCCcc--cCC--------HHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHHHCCEEEEEE-CCEEEE
Confidence 45677777777553 111 001123344556666777877766543220 1113445666775 687754
No 202
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=39.74 E-value=63 Score=19.63 Aligned_cols=16 Identities=25% Similarity=0.376 Sum_probs=13.4
Q ss_pred EEEEECCCCCEEeeee
Q 033342 102 THVLLDDAGNIRSTYR 117 (121)
Q Consensus 102 s~~~i~~~G~i~~~y~ 117 (121)
+.++|+++|+++..+.
T Consensus 153 ~~~lid~~G~i~~~~~ 168 (190)
T 2vup_A 153 TSFLIDRDGVPVERFS 168 (190)
T ss_dssp CEEEECTTSCEEEEEC
T ss_pred eEEEECCCCcEEEEEC
Confidence 7899999999987653
No 203
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=39.53 E-value=24 Score=21.14 Aligned_cols=18 Identities=11% Similarity=0.268 Sum_probs=14.7
Q ss_pred EEEEEEECCCCCEEeeee
Q 033342 100 CNTHVLLDDAGNIRSTYR 117 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y~ 117 (121)
.-+.++|+++|+++..|.
T Consensus 133 ~p~~~liD~~G~i~~~~~ 150 (171)
T 2yzh_A 133 ARAVFIIDKEGKVAYVQL 150 (171)
T ss_dssp CCEEEEECTTSBEEEEEE
T ss_pred eeEEEEEcCCCeEEEEEe
Confidence 457899999999987763
No 204
>2j63_A AP-endonuclease; base excision repair, lyase; 2.48A {Leishmania major}
Probab=39.51 E-value=24 Score=25.64 Aligned_cols=20 Identities=15% Similarity=0.353 Sum_probs=14.8
Q ss_pred HHHHHHHHHHCCCcEEEccCCcc
Q 033342 27 CSRLVKEAASAGAKLLCFPENFS 49 (121)
Q Consensus 27 ~~~~~~~a~~~~~dlvv~PE~~~ 49 (121)
+.+.++ ..++|||+|.|+-.
T Consensus 171 i~~~I~---~~~pDIVcLQEtk~ 190 (467)
T 2j63_A 171 LRAFME---AEKPDVLCLQETKL 190 (467)
T ss_dssp HHHHHH---HHCCSEEEEECCCC
T ss_pred HHHHHH---HcCCCEEEEEeccc
Confidence 444444 56899999999875
No 205
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=39.31 E-value=25 Score=20.85 Aligned_cols=17 Identities=18% Similarity=0.350 Sum_probs=14.4
Q ss_pred EEEEEEECCCCCEEeee
Q 033342 100 CNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y 116 (121)
+-+.++++++|+++..+
T Consensus 128 ~p~~~lid~~G~i~~~~ 144 (167)
T 2jsy_A 128 ARSVFVLDENGKVVYAE 144 (167)
T ss_dssp CCEEEEECTTSCEEEEE
T ss_pred eeEEEEEcCCCcEEEEE
Confidence 46789999999998776
No 206
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=39.31 E-value=21 Score=21.07 Aligned_cols=16 Identities=19% Similarity=0.505 Sum_probs=13.4
Q ss_pred EEEEECCCCCEEeeee
Q 033342 102 THVLLDDAGNIRSTYR 117 (121)
Q Consensus 102 s~~~i~~~G~i~~~y~ 117 (121)
+.++|+++|+++..|.
T Consensus 136 ~~~lid~~G~i~~~~~ 151 (170)
T 2p5q_A 136 AKFLVNKDGQVVDRYY 151 (170)
T ss_dssp CEEEECTTSCEEEEEC
T ss_pred cEEEECCCCCEEEeeC
Confidence 7899999999987653
No 207
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=39.25 E-value=80 Score=21.16 Aligned_cols=26 Identities=15% Similarity=0.170 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEcc
Q 033342 20 LAANFATCSRLVKEAASAGAKLLCFP 45 (121)
Q Consensus 20 ~~~n~~~~~~~~~~a~~~~~dlvv~P 45 (121)
.+..++.+.+.++.|+.-|++.|+.|
T Consensus 104 r~~~~~~~~~~i~~A~~lG~~~v~~~ 129 (335)
T 2qw5_A 104 RQEALEYLKSRVDITAALGGEIMMGP 129 (335)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEecc
Confidence 34567888889998999999999655
No 208
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=39.13 E-value=20 Score=22.71 Aligned_cols=16 Identities=13% Similarity=0.156 Sum_probs=13.9
Q ss_pred EEEEECCCCCEEeeee
Q 033342 102 THVLLDDAGNIRSTYR 117 (121)
Q Consensus 102 s~~~i~~~G~i~~~y~ 117 (121)
+.++|+++|+++.+|.
T Consensus 161 ttflID~~G~i~~~~~ 176 (207)
T 2r37_A 161 EKFLVGPDGIPIMRWH 176 (207)
T ss_dssp CEEEECTTSCEEEEEC
T ss_pred eEEEECCCCcEEEEEC
Confidence 6799999999988774
No 209
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8
Probab=38.96 E-value=96 Score=21.54 Aligned_cols=75 Identities=12% Similarity=0.066 Sum_probs=42.1
Q ss_pred EEEEEEecc---c----cCHHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHc
Q 033342 8 RVAVAQMTS---I----NDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARES 80 (121)
Q Consensus 8 ~ia~vQ~~~---~----~~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~ 80 (121)
.+.++++-. . .+.+.-.+.+.++++++.+.++.+|+..= .. ..+.... ..........+.+.+.++|+++
T Consensus 232 d~VvI~~G~ND~~~~~~~~~~~~~~~l~~ii~~lr~~~a~vilvtP-~~-~~~~~~~-~~~~~~~~~~~~~~i~~lA~~~ 308 (375)
T 2o14_A 232 DYFMLQLGINDTNPKHKESEAEFKEVMRDMIRQVKAKGADVILSTP-QG-RATDFTS-EGIHSSVNRWYRASILALAEEE 308 (375)
T ss_dssp CEEEEECCTGGGCGGGCCCHHHHHHHHHHHHHHHHTTTCEEEEECC-CC-CTTCBCT-TSCBCCTTSTTHHHHHHHHHHT
T ss_pred CEEEEEEEccCCCccCCCCHHHHHHHHHHHHHHHHHCCCEEEEECC-CC-cccccCc-ccchhHHHHHHHHHHHHHHHHc
Confidence 566777632 1 14555566666777777667888877631 11 1110100 0111123456778888999999
Q ss_pred CcEEE
Q 033342 81 SMWLS 85 (121)
Q Consensus 81 ~~~ii 85 (121)
++.++
T Consensus 309 ~v~~i 313 (375)
T 2o14_A 309 KTYLI 313 (375)
T ss_dssp TCEEE
T ss_pred CCeEE
Confidence 98774
No 210
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=38.89 E-value=33 Score=20.95 Aligned_cols=18 Identities=11% Similarity=-0.174 Sum_probs=13.3
Q ss_pred hHHHHHHHHHHHcCcEEE
Q 033342 68 PIMQGYCSLARESSMWLS 85 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii 85 (121)
.+-+.+.++|+++++.++
T Consensus 140 ~~n~~~~~~a~~~~v~~i 157 (200)
T 4h08_A 140 VRNQIALKHINRASIEVN 157 (200)
T ss_dssp HHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHhhhcceEEE
Confidence 345667888999998774
No 211
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=38.88 E-value=23 Score=21.84 Aligned_cols=39 Identities=8% Similarity=0.025 Sum_probs=17.5
Q ss_pred CCCCcccEEEEEEeccccCHHHHHHHHHHHHHHHHHCCCcE
Q 033342 1 MAGAHSVRVAVAQMTSINDLAANFATCSRLVKEAASAGAKL 41 (121)
Q Consensus 1 ~~~~~~~~ia~vQ~~~~~~~~~n~~~~~~~~~~a~~~~~dl 41 (121)
|+++.+|||.++-.....+ .|-+++.+.+.+....+.++
T Consensus 1 m~m~~~Mkilii~gS~r~~--g~t~~la~~i~~~l~~g~~v 39 (193)
T 1rtt_A 1 MSLSDDIKVLGISGSLRSG--SYNSAALQEAIGLVPPGMSI 39 (193)
T ss_dssp ------CEEEEEESCCSTT--CHHHHHHHHHHTTCCTTCEE
T ss_pred CCCCCCceEEEEECCCCCC--ChHHHHHHHHHHhccCCCeE
Confidence 5555568998888776422 34445444444332234444
No 212
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=38.84 E-value=63 Score=21.72 Aligned_cols=25 Identities=28% Similarity=0.337 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHCCCcE-EEccCC
Q 033342 23 NFATCSRLVKEAASAGAKL-LCFPEN 47 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dl-vv~PE~ 47 (121)
+.+...++.+.|.+.|+|- ++.|=+
T Consensus 83 ~t~~ai~la~~A~~~Gadavlv~~P~ 108 (294)
T 3b4u_A 83 SIEDAADQSAEALNAGARNILLAPPS 108 (294)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred cHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 4566777888888889994 444443
No 213
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=38.70 E-value=74 Score=20.14 Aligned_cols=59 Identities=10% Similarity=0.025 Sum_probs=33.0
Q ss_pred CHHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEE
Q 033342 19 DLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLS 85 (121)
Q Consensus 19 ~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii 85 (121)
+...|++++.+.++ +.++.+|+.-=... ..+... .+ ......+.+.+.++|+++++.++
T Consensus 109 ~~~~~l~~~i~~~~---~~g~~vil~tp~p~-~~~~~~---~~-~~~~~~y~~~~~~vA~~~~v~~i 167 (233)
T 1k7c_A 109 TFPAYLENAAKLFT---AKGAKVILSSQTPN-NPWETG---TF-VNSPTRFVEYAELAAEVAGVEYV 167 (233)
T ss_dssp BHHHHHHHHHHHHH---HTTCEEEEECCCCC-CTTTTS---SC-CCCCCHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHHH---HCCCEEEEECCCCc-cccCCC---cc-ccchHHHHHHHHHHHHHhCCeEE
Confidence 45556666655554 56777766521110 011100 11 12345788899999999998874
No 214
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=38.63 E-value=96 Score=21.45 Aligned_cols=39 Identities=21% Similarity=0.241 Sum_probs=25.7
Q ss_pred CCcEEEc-cCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 38 GAKLLCF-PENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 38 ~~dlvv~-PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
++.+|++ |=...++|.. .+.+.++.+.++|+++++.++.
T Consensus 190 ~~~~v~~~~~~~NPtG~~----------~~~~~l~~l~~~a~~~~~~li~ 229 (425)
T 2r2n_A 190 TPKFLYTVPNGNNPTGNS----------LTSERKKEIYELARKYDFLIIE 229 (425)
T ss_dssp CCSEEEECCSSCTTTCCC----------CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CceEEEECCCCcCCCCCc----------CCHHHHHHHHHHHHHcCCEEEE
Confidence 4677654 6544444532 2335678899999999998865
No 215
>3l1w_A Uncharacterized protein; APC29019.2, conserved protein, enterococcus faecalis V583, PSI-2, MCSG, structural genomics; 1.60A {Enterococcus faecalis}
Probab=38.55 E-value=40 Score=21.41 Aligned_cols=25 Identities=16% Similarity=0.151 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHCCCcEEEccCCcc
Q 033342 22 ANFATCSRLVKEAASAGAKLLCFPENFS 49 (121)
Q Consensus 22 ~n~~~~~~~~~~a~~~~~dlvv~PE~~~ 49 (121)
...+.+.+.++ ..++|||++.|...
T Consensus 22 ~r~~~i~~~i~---~~~~DIv~LQEv~~ 46 (257)
T 3l1w_A 22 FRKEAVCQLIN---FHDWSLCCIQEVRP 46 (257)
T ss_dssp HHHHHHHHHHH---HHCCSEEEEEEECH
T ss_pred HHHHHHHHHHH---HcCCCEEEEeCCCH
Confidence 34445555554 45899999999763
No 216
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=38.33 E-value=94 Score=21.26 Aligned_cols=39 Identities=10% Similarity=0.106 Sum_probs=24.2
Q ss_pred CCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 38 GAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 38 ~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
+..+++.+.-..++|.. .+.+.++.+.++|+++++.++.
T Consensus 183 ~~~~i~~~~p~NPtG~~----------~~~~~l~~i~~~~~~~~~~li~ 221 (409)
T 4eu1_A 183 GSVILVHACAHNPTGVD----------PTHDDWRQVCDVIKRRNHIPFV 221 (409)
T ss_dssp TCEEEEESSSCTTTCCC----------CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CcEEEEECCCCCCCCCC----------CCHHHHHHHHHHHHhCCcEEEE
Confidence 34555556655545532 2234577788888888887764
No 217
>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=38.26 E-value=53 Score=18.33 Aligned_cols=48 Identities=13% Similarity=0.029 Sum_probs=30.1
Q ss_pred hHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEeee
Q 033342 68 PIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~~y 116 (121)
+-++.+.+-+++.|+.++.+.... ........-+.++.+|+|..+..+
T Consensus 79 ~d~~~~~~~l~~~G~~~~~~p~~~-~~~~~~~~~~~~~~DPdGn~iel~ 126 (135)
T 3rri_A 79 KHFDNLYKLAKQRGIPFYHDLSRR-FEGLIEEHETFFLIDPSNNLLEFK 126 (135)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEE-STTSTTCEEEEEEECTTCCEEEEE
T ss_pred HhHHHHHHHHHHcCCceecCcccc-cCCCCCceEEEEEECCCCCEEEEE
Confidence 556777777778888886663332 112112345788999999876543
No 218
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=38.20 E-value=28 Score=20.34 Aligned_cols=16 Identities=25% Similarity=0.287 Sum_probs=13.3
Q ss_pred EEEEECCCCCEEeeee
Q 033342 102 THVLLDDAGNIRSTYR 117 (121)
Q Consensus 102 s~~~i~~~G~i~~~y~ 117 (121)
+.++++++|+++..+.
T Consensus 124 ~~~lid~~G~i~~~~~ 139 (160)
T 1xvw_A 124 GTFVVDRSGIIRFAEM 139 (160)
T ss_dssp EEEEECTTSBEEEEEE
T ss_pred eEEEECCCCeEEEEEe
Confidence 7899999999977653
No 219
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=38.16 E-value=33 Score=15.89 Aligned_cols=19 Identities=37% Similarity=0.328 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHHCC
Q 033342 20 LAANFATCSRLVKEAASAG 38 (121)
Q Consensus 20 ~~~n~~~~~~~~~~a~~~~ 38 (121)
...|++.+++++-.|.++|
T Consensus 6 ~~d~I~aiEQqiyvA~seG 24 (40)
T 1gp8_A 6 SAANKDAIRKQMDAAASKG 24 (40)
T ss_dssp HHHHHHHHHHHHHHHHTTS
T ss_pred hHHHHHHHHHHHHHHHhcC
Confidence 5679999999999887654
No 220
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=38.05 E-value=23 Score=20.50 Aligned_cols=17 Identities=24% Similarity=0.405 Sum_probs=13.6
Q ss_pred EEEEEEECCCCCEEeee
Q 033342 100 CNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y 116 (121)
+-+.++++++|+++..+
T Consensus 117 ~P~~~lid~~G~i~~~~ 133 (150)
T 3fw2_A 117 IPANILLSSDGKILAKN 133 (150)
T ss_dssp SSEEEEECTTSBEEEES
T ss_pred cCeEEEECCCCEEEEcc
Confidence 45789999999987654
No 221
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=37.83 E-value=27 Score=20.80 Aligned_cols=17 Identities=12% Similarity=0.143 Sum_probs=13.6
Q ss_pred EEEEEEECCCCCEEeee
Q 033342 100 CNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y 116 (121)
.-+.++|+++|+++..+
T Consensus 129 ~p~~~liD~~G~i~~~~ 145 (166)
T 3p7x_A 129 ARAVFVLDADNKVVYKE 145 (166)
T ss_dssp CCEEEEECTTCBEEEEE
T ss_pred eeEEEEECCCCeEEEEE
Confidence 45679999999997664
No 222
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=37.58 E-value=1.1e+02 Score=21.60 Aligned_cols=22 Identities=5% Similarity=0.040 Sum_probs=18.5
Q ss_pred CCChHHHHHHHHHHHcCcEEEe
Q 033342 65 LDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 65 ~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
.+.++++.+.++|+++++.++.
T Consensus 245 ~~~~~l~~l~~l~~~~g~~lI~ 266 (451)
T 3oks_A 245 PADGFLPTLLDWCRKNDVVFIA 266 (451)
T ss_dssp CCTTHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHcCCEEEE
Confidence 3567899999999999998873
No 223
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=37.55 E-value=45 Score=23.14 Aligned_cols=20 Identities=30% Similarity=0.277 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHCCCcEE
Q 033342 23 NFATCSRLVKEAASAGAKLL 42 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlv 42 (121)
+.+...++.+.|.+.|+|-+
T Consensus 111 st~eai~la~~A~~~Gadav 130 (343)
T 2v9d_A 111 NARETIELSQHAQQAGADGI 130 (343)
T ss_dssp CHHHHHHHHHHHHHHTCSEE
T ss_pred CHHHHHHHHHHHHhcCCCEE
Confidence 45566777788878899843
No 224
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=37.35 E-value=35 Score=22.22 Aligned_cols=16 Identities=31% Similarity=0.555 Sum_probs=10.9
Q ss_pred HHHHHHCCCcEEEccC
Q 033342 31 VKEAASAGAKLLCFPE 46 (121)
Q Consensus 31 ~~~a~~~~~dlvv~PE 46 (121)
.+++.+.|+++||-|=
T Consensus 78 a~~ai~AGA~fivsP~ 93 (217)
T 3lab_A 78 FQKAIDAGAQFIVSPG 93 (217)
T ss_dssp HHHHHHHTCSEEEESS
T ss_pred HHHHHHcCCCEEEeCC
Confidence 3455667888888764
No 225
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=37.22 E-value=30 Score=20.09 Aligned_cols=18 Identities=28% Similarity=0.348 Sum_probs=13.7
Q ss_pred EEEEEEECCCCCEEeeee
Q 033342 100 CNTHVLLDDAGNIRSTYR 117 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y~ 117 (121)
+=+.++++++|+++..|.
T Consensus 121 ~P~~~lid~~G~i~~~~~ 138 (160)
T 3lor_A 121 TPSIILADRKGRIRQVQF 138 (160)
T ss_dssp SSEEEEECTTSBEEEEEE
T ss_pred cceEEEECCCCcEEEEec
Confidence 345799999999977653
No 226
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=37.14 E-value=32 Score=19.37 Aligned_cols=19 Identities=32% Similarity=0.380 Sum_probs=14.7
Q ss_pred eEEEEEEECCCCCEEeeee
Q 033342 99 LCNTHVLLDDAGNIRSTYR 117 (121)
Q Consensus 99 ~~Ns~~~i~~~G~i~~~y~ 117 (121)
.+=+.++++++|+++..+.
T Consensus 114 ~~P~~~lid~~G~i~~~~~ 132 (145)
T 3erw_A 114 TIPTSFLLNEKGEIEKTKI 132 (145)
T ss_dssp EESEEEEECTTCCEEEEEE
T ss_pred ccCeEEEEcCCCcEEEEEc
Confidence 4567899999999876653
No 227
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=36.90 E-value=34 Score=23.40 Aligned_cols=19 Identities=11% Similarity=-0.052 Sum_probs=15.9
Q ss_pred hHHHHHHHHHHHcCcEEEe
Q 033342 68 PIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~ 86 (121)
+.++.+.++|+++++.++.
T Consensus 187 ~~l~~l~~~~~~~~~~li~ 205 (410)
T 3e2y_A 187 QELQVIADLCVKHDTLCIS 205 (410)
T ss_dssp HHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHcCcEEEE
Confidence 4588899999999998864
No 228
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=36.89 E-value=50 Score=22.19 Aligned_cols=20 Identities=30% Similarity=0.265 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHCCCcEE
Q 033342 23 NFATCSRLVKEAASAGAKLL 42 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlv 42 (121)
+.+...++.+.|.+.|+|-+
T Consensus 84 ~t~~ai~la~~a~~~Gadav 103 (293)
T 1f6k_A 84 NLKEAVELGKYATELGYDCL 103 (293)
T ss_dssp CHHHHHHHHHHHHHHTCSEE
T ss_pred CHHHHHHHHHHHHhcCCCEE
Confidence 34566677777877898843
No 229
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=36.78 E-value=23 Score=21.14 Aligned_cols=16 Identities=25% Similarity=0.573 Sum_probs=13.3
Q ss_pred EEEEECCCCCEEeeee
Q 033342 102 THVLLDDAGNIRSTYR 117 (121)
Q Consensus 102 s~~~i~~~G~i~~~y~ 117 (121)
+.++|+++|+++..+.
T Consensus 136 ~~~lid~~G~i~~~~~ 151 (171)
T 3cmi_A 136 EKFLVDKKGKVYERYS 151 (171)
T ss_dssp CEEEECSSSCEEEEEC
T ss_pred eEEEECCCCCEEEEeC
Confidence 7899999999987653
No 230
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=36.69 E-value=46 Score=22.48 Aligned_cols=20 Identities=30% Similarity=0.353 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHCCCcEE
Q 033342 23 NFATCSRLVKEAASAGAKLL 42 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlv 42 (121)
+.+...++.+.|.+.|+|-+
T Consensus 80 ~t~~ai~la~~A~~~Gadav 99 (297)
T 2rfg_A 80 NPVEAVRYAQHAQQAGADAV 99 (297)
T ss_dssp SHHHHHHHHHHHHHHTCSEE
T ss_pred CHHHHHHHHHHHHhcCCCEE
Confidence 45566777888878899854
No 231
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=36.60 E-value=69 Score=21.71 Aligned_cols=22 Identities=14% Similarity=0.117 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHCCCcEEEc
Q 033342 23 NFATCSRLVKEAASAGAKLLCF 44 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlvv~ 44 (121)
+.+...++.+.|.+.|+|-++.
T Consensus 94 ~t~~ai~la~~A~~~Gadavlv 115 (307)
T 3s5o_A 94 STQATVEMTVSMAQVGADAAMV 115 (307)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEE
Confidence 4566777888888889985443
No 232
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=36.56 E-value=30 Score=20.85 Aligned_cols=18 Identities=33% Similarity=0.289 Sum_probs=14.4
Q ss_pred EEEEEEECCCCCEEeeee
Q 033342 100 CNTHVLLDDAGNIRSTYR 117 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y~ 117 (121)
+-+.++++++|+++..|.
T Consensus 144 ~P~~~lid~~G~i~~~~~ 161 (186)
T 1jfu_A 144 MPTSVLVDPQGCEIATIA 161 (186)
T ss_dssp SSEEEEECTTSBEEEEEE
T ss_pred CCEEEEECCCCCEEEEEe
Confidence 457899999999987653
No 233
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=36.52 E-value=45 Score=21.50 Aligned_cols=21 Identities=19% Similarity=0.232 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHCCCcEEEcc
Q 033342 25 ATCSRLVKEAASAGAKLLCFP 45 (121)
Q Consensus 25 ~~~~~~~~~a~~~~~dlvv~P 45 (121)
+.+.+.++.|..-|+..|+++
T Consensus 84 ~~~~~~i~~A~~lGa~~v~~~ 104 (264)
T 1yx1_A 84 PELEPTLRRAEACGAGWLKVS 104 (264)
T ss_dssp TTHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEe
Confidence 567778888888899887764
No 234
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=36.34 E-value=93 Score=20.64 Aligned_cols=54 Identities=11% Similarity=-0.050 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHCCCcEEEcc----CCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEec
Q 033342 24 FATCSRLVKEAASAGAKLLCFP----ENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLG 87 (121)
Q Consensus 24 ~~~~~~~~~~a~~~~~dlvv~P----E~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G 87 (121)
.+...++++++++.|+|+|-+- .++. .++. ....+.+..+.+.+++.|+.++.-
T Consensus 36 ~e~a~~~a~~l~~~Ga~~vk~~~fkprts~-~~~~---------g~~~egl~~l~~~~~~~Gl~~~te 93 (262)
T 1zco_A 36 REQIMKVAEFLAEVGIKVLRGGAFKPRTSP-YSFQ---------GYGEKALRWMREAADEYGLVTVTE 93 (262)
T ss_dssp HHHHHHHHHHHHHTTCCEEECBSSCCCSST-TSCC---------CCTHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEEecccCCCc-cccc---------CccHHHHHHHHHHHHHcCCcEEEe
Confidence 5677888888888999988663 3221 1111 112566777888888989888654
No 235
>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*
Probab=36.30 E-value=58 Score=18.22 Aligned_cols=44 Identities=9% Similarity=-0.024 Sum_probs=28.9
Q ss_pred hHHHHHHHHHHH---cCcEEEeccceeecCCCCceEEEEEEECCCCCEEeeee
Q 033342 68 PIMQGYCSLARE---SSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYR 117 (121)
Q Consensus 68 ~~~~~l~~~a~~---~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~~y~ 117 (121)
+-++.+.+-+++ .|+.++.+. ... ..| -.+++.+|+|..+..+.
T Consensus 84 ~dv~~~~~~l~~~~~~G~~~~~~p-~~~--~~g---~~~~~~DPdGn~iel~~ 130 (132)
T 3sk2_A 84 EDVDKLFNEWTKQKSHQIIVIKEP-YTD--VFG---RTFLISDPDGHIIRVCP 130 (132)
T ss_dssp HHHHHHHHHHHHCSSSCCEEEEEE-EEE--TTE---EEEEEECTTCCEEEEEE
T ss_pred HHHHHHHHHHHhhhcCCCEEeeCC-ccc--Cce---EEEEEECCCCCEEEEEe
Confidence 346666666677 888886552 221 333 45789999998877654
No 236
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=36.29 E-value=24 Score=22.27 Aligned_cols=37 Identities=16% Similarity=0.364 Sum_probs=22.0
Q ss_pred EEEEEecc-c-cCHHHHHHHHHHHHHHHHHCCCcEEEcc
Q 033342 9 VAVAQMTS-I-NDLAANFATCSRLVKEAASAGAKLLCFP 45 (121)
Q Consensus 9 ia~vQ~~~-~-~~~~~n~~~~~~~~~~a~~~~~dlvv~P 45 (121)
+.++-.-. + +.+...+..+.++.++-...+..+|-++
T Consensus 49 ~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~ 87 (208)
T 2f8a_A 49 VLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFP 87 (208)
T ss_dssp EEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred EEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEE
Confidence 44444432 3 5566667777777666555667777664
No 237
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=36.26 E-value=28 Score=21.33 Aligned_cols=17 Identities=18% Similarity=0.237 Sum_probs=14.1
Q ss_pred EEEEEEECCCCCEEeee
Q 033342 100 CNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y 116 (121)
.-+.++|+++|+++..+
T Consensus 118 ~p~~~lID~~G~i~~~~ 134 (186)
T 1n8j_A 118 DRATFVVDPQGIIQAIE 134 (186)
T ss_dssp CEEEEEECTTSBEEEEE
T ss_pred eeEEEEECCCCeEEEEE
Confidence 46889999999997765
No 238
>1whi_A Ribosomal protein L14; rRNA-binding; 1.50A {Geobacillus stearothermophilus} SCOP: b.39.1.1 PDB: 1giy_N 1ml5_n* 1c04_D 1yl3_N 2b66_O 2b9n_O 2b9p_O 487d_M
Probab=36.22 E-value=14 Score=21.84 Aligned_cols=16 Identities=31% Similarity=0.376 Sum_probs=13.4
Q ss_pred EEEEEEECCCCCEEee
Q 033342 100 CNTHVLLDDAGNIRST 115 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~ 115 (121)
-|++++++++|+..++
T Consensus 81 dNa~Vlin~~g~p~GT 96 (122)
T 1whi_A 81 ENACVIIRDDKSPRGT 96 (122)
T ss_dssp SCEEEEECTTSCBSSS
T ss_pred CceEEEECCCCCEeee
Confidence 3999999999987664
No 239
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=35.91 E-value=65 Score=18.68 Aligned_cols=41 Identities=7% Similarity=0.108 Sum_probs=26.4
Q ss_pred HHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEeee
Q 033342 70 MQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~~y 116 (121)
++.+.+.+++.|+.++.+.... ..| -.+++.+|+|..+..+
T Consensus 76 ~d~~~~~l~~~G~~v~~~p~~~---~~G---~~~~~~DPdG~~iel~ 116 (144)
T 3r6a_A 76 LDKFKTFLEENGAEIIRGPSKV---PTG---RNMTVRHSDGSVIEYV 116 (144)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEE---TTE---EEEEEECTTSCEEEEE
T ss_pred HHHHHHHHHHcCCEEecCCccC---CCc---eEEEEECCCCCEEEEE
Confidence 4556666677888876552222 333 2468999999887654
No 240
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=35.90 E-value=85 Score=20.03 Aligned_cols=71 Identities=13% Similarity=0.115 Sum_probs=39.9
Q ss_pred cEEEEEEecc--ccCHHHHHHHHHHHHHHHHHCCCcEEEc-cCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcE
Q 033342 7 VRVAVAQMTS--INDLAANFATCSRLVKEAASAGAKLLCF-PENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMW 83 (121)
Q Consensus 7 ~~ia~vQ~~~--~~~~~~n~~~~~~~~~~a~~~~~dlvv~-PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ 83 (121)
+++..++... ....++..+.+.+.++.|..-|++.|++ |-.. +. +.+... ..+.+..+.+.|+++|+.
T Consensus 65 l~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~---~~--~~~~~~----~~~~l~~l~~~a~~~gv~ 135 (272)
T 2q02_A 65 LEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVGARALVLCPLND---GT--IVPPEV----TVEAIKRLSDLFARYDIQ 135 (272)
T ss_dssp CEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHHTCSEEEECCCCS---SB--CCCHHH----HHHHHHHHHHHHHTTTCE
T ss_pred CeEEechhhhccCCcHHHHHHHHHHHHHHHHHhCCCEEEEccCCC---ch--hHHHHH----HHHHHHHHHHHHHHcCCE
Confidence 6665555422 1112345677888888888889998775 3211 10 111111 023456667777888887
Q ss_pred EEe
Q 033342 84 LSL 86 (121)
Q Consensus 84 ii~ 86 (121)
+.+
T Consensus 136 l~~ 138 (272)
T 2q02_A 136 GLV 138 (272)
T ss_dssp EEE
T ss_pred EEE
Confidence 643
No 241
>1mv5_A LMRA, multidrug resistance ABC transporter ATP-binding and permease protein; asymmetric dimer, tetramer, P-glycoprotein; HET: ATP ADP; 3.10A {Lactococcus lactis} SCOP: c.37.1.12
Probab=35.88 E-value=60 Score=20.96 Aligned_cols=65 Identities=12% Similarity=0.083 Sum_probs=36.8
Q ss_pred HHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCE
Q 033342 33 EAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNI 112 (121)
Q Consensus 33 ~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i 112 (121)
+|...+++++++=|-+. .+.........+.+.++. + +..+++-+.... .- ...+..++++ +|++
T Consensus 152 ral~~~p~lllLDEPts----------~LD~~~~~~i~~~l~~~~-~-~~tvi~vtH~~~--~~-~~~d~v~~l~-~G~i 215 (243)
T 1mv5_A 152 RAFLRNPKILMLDEATA----------SLDSESESMVQKALDSLM-K-GRTTLVIAHRLS--TI-VDADKIYFIE-KGQI 215 (243)
T ss_dssp HHHHHCCSEEEEECCSC----------SSCSSSCCHHHHHHHHHH-T-TSEEEEECCSHH--HH-HHCSEEEEEE-TTEE
T ss_pred HHHhcCCCEEEEECCcc----------cCCHHHHHHHHHHHHHhc-C-CCEEEEEeCChH--HH-HhCCEEEEEE-CCEE
Confidence 34456789999998765 222223456677777775 3 555555433221 11 2245666775 6876
Q ss_pred E
Q 033342 113 R 113 (121)
Q Consensus 113 ~ 113 (121)
+
T Consensus 216 ~ 216 (243)
T 1mv5_A 216 T 216 (243)
T ss_dssp C
T ss_pred E
Confidence 4
No 242
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=35.71 E-value=95 Score=20.75 Aligned_cols=17 Identities=12% Similarity=0.548 Sum_probs=14.2
Q ss_pred HHHHHHHHHHcCcEEEe
Q 033342 70 MQGYCSLARESSMWLSL 86 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~ 86 (121)
++.+.++|++++++++.
T Consensus 190 l~~i~~l~~~~~~~li~ 206 (397)
T 3f9t_A 190 IEELSKIAKENNIYIHV 206 (397)
T ss_dssp HHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHhCCeEEE
Confidence 67799999999988864
No 243
>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}
Probab=35.68 E-value=56 Score=17.92 Aligned_cols=43 Identities=9% Similarity=-0.061 Sum_probs=26.8
Q ss_pred HHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEeeee
Q 033342 70 MQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYR 117 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~~y~ 117 (121)
++.+.+.+++.|+.++.+ .... ..|. -.+++.+|+|..+..+.
T Consensus 90 ~~~~~~~l~~~G~~~~~~-~~~~--~~g~--~~~~~~DP~G~~~el~e 132 (133)
T 4hc5_A 90 IDEAYKTLTERGVTFTKP-PEMM--PWGQ--RATWFSDPDGNQFFLVE 132 (133)
T ss_dssp HHHHHHHHHHTTCEESSS-CEEC--TTSC--EEEEEECTTCEEEEEEE
T ss_pred HHHHHHHHHHCCCEeecC-CCcC--CCCC--EEEEEECCCCCEEEEEe
Confidence 555556566778877544 2221 2232 56788999998876654
No 244
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=35.62 E-value=25 Score=21.28 Aligned_cols=16 Identities=31% Similarity=0.574 Sum_probs=13.4
Q ss_pred EEEEECCCCCEEeeee
Q 033342 102 THVLLDDAGNIRSTYR 117 (121)
Q Consensus 102 s~~~i~~~G~i~~~y~ 117 (121)
+.++|+++|+++..|.
T Consensus 152 ~~~lid~~G~i~~~~~ 167 (183)
T 2obi_A 152 TKFLIDKNGCVVKRYG 167 (183)
T ss_dssp CEEEECTTSCEEEEEC
T ss_pred eEEEECCCCCEEEEeC
Confidence 7899999999987663
No 245
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=35.56 E-value=49 Score=22.80 Aligned_cols=20 Identities=35% Similarity=0.415 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHCCCcEE
Q 033342 23 NFATCSRLVKEAASAGAKLL 42 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlv 42 (121)
+.+...++.+.|.+.|+|-+
T Consensus 114 st~eai~la~~A~~~Gadav 133 (332)
T 2r8w_A 114 RTDEAVALAKDAEAAGADAL 133 (332)
T ss_dssp SHHHHHHHHHHHHHHTCSEE
T ss_pred CHHHHHHHHHHHHhcCCCEE
Confidence 34566677777877899844
No 246
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=35.39 E-value=22 Score=24.13 Aligned_cols=19 Identities=26% Similarity=0.469 Sum_probs=15.8
Q ss_pred hHHHHHHHHHHHcCcEEEe
Q 033342 68 PIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~ 86 (121)
+.++.+.++|+++++.++.
T Consensus 178 ~~l~~l~~~~~~~~~~li~ 196 (376)
T 2dou_A 178 GYFEEALGLARKHGLWLIH 196 (376)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHcCCEEEE
Confidence 4578899999999998865
No 247
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=35.06 E-value=60 Score=21.38 Aligned_cols=17 Identities=24% Similarity=0.313 Sum_probs=12.8
Q ss_pred HHHHHHHHHHcCcEEEe
Q 033342 70 MQGYCSLARESSMWLSL 86 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~ 86 (121)
++.+.++|++++++++.
T Consensus 143 ~~~i~~l~~~~~~~li~ 159 (353)
T 2yrr_A 143 AEAIGALAKEAGALFFL 159 (353)
T ss_dssp HHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHcCCeEEE
Confidence 45788888888887754
No 248
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=35.04 E-value=45 Score=22.63 Aligned_cols=20 Identities=30% Similarity=0.330 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHCCCcEE
Q 033342 23 NFATCSRLVKEAASAGAKLL 42 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlv 42 (121)
+.+...++.+.|.+.|+|-+
T Consensus 92 st~~ai~la~~A~~~Gadav 111 (306)
T 1o5k_A 92 STEKTLKLVKQAEKLGANGV 111 (306)
T ss_dssp CHHHHHHHHHHHHHHTCSEE
T ss_pred cHHHHHHHHHHHHhcCCCEE
Confidence 34566777787878898843
No 249
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=34.92 E-value=26 Score=23.83 Aligned_cols=19 Identities=5% Similarity=-0.034 Sum_probs=15.4
Q ss_pred hHHHHHHHHHHHcCcEEEe
Q 033342 68 PIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~ 86 (121)
+.++.+.++|+++++.++.
T Consensus 188 ~~l~~i~~~~~~~~~~li~ 206 (396)
T 3jtx_A 188 DGWKEVFDLQDKYGFIIAS 206 (396)
T ss_dssp HHHHHHHHHHHHHCCEEEE
T ss_pred HHHHHHHHHHHHcCCEEEE
Confidence 4577889999999998864
No 250
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=34.92 E-value=31 Score=20.81 Aligned_cols=16 Identities=25% Similarity=0.356 Sum_probs=13.6
Q ss_pred EEEEEECCCCCEEeee
Q 033342 101 NTHVLLDDAGNIRSTY 116 (121)
Q Consensus 101 Ns~~~i~~~G~i~~~y 116 (121)
-+.++++++|+++..+
T Consensus 130 p~~~lid~~G~I~~~~ 145 (175)
T 1xvq_A 130 RAIVVIGADGNVAYTE 145 (175)
T ss_dssp SEEEEECTTSBEEEEE
T ss_pred ceEEEECCCCeEEEEE
Confidence 4689999999998776
No 251
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=34.84 E-value=58 Score=22.06 Aligned_cols=20 Identities=20% Similarity=0.197 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHCCCcEE
Q 033342 23 NFATCSRLVKEAASAGAKLL 42 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlv 42 (121)
+.+...++.+.|.+.|+|-+
T Consensus 91 ~t~~ai~la~~A~~~Gadav 110 (303)
T 2wkj_A 91 STAESQQLAASAKRYGFDAV 110 (303)
T ss_dssp SHHHHHHHHHHHHHHTCSEE
T ss_pred CHHHHHHHHHHHHhCCCCEE
Confidence 34566777777877898843
No 252
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=34.75 E-value=56 Score=22.24 Aligned_cols=17 Identities=12% Similarity=0.153 Sum_probs=13.9
Q ss_pred HHHHHHHHHHcCcEEEe
Q 033342 70 MQGYCSLARESSMWLSL 86 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~ 86 (121)
++.+.++|+++++.++.
T Consensus 188 l~~i~~l~~~~~~~li~ 204 (420)
T 1t3i_A 188 AEEIAQLAHQAGAKVLV 204 (420)
T ss_dssp HHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCEEEE
Confidence 67888999999988764
No 253
>1v43_A Sugar-binding transport ATP-binding protein; ATPase, active transport, sugar uptake and regulation, transport protein; 2.20A {Pyrococcus horikoshii} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 1vci_A*
Probab=34.72 E-value=17 Score=25.63 Aligned_cols=44 Identities=5% Similarity=0.071 Sum_probs=23.9
Q ss_pred hHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEe
Q 033342 68 PIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRS 114 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~ 114 (121)
...+.+.++.++.++.+++-+.... .--.+-+..++++ +|+++.
T Consensus 179 ~l~~~l~~l~~~~g~tvi~vTHd~~--~a~~~adri~vl~-~G~i~~ 222 (372)
T 1v43_A 179 AMRAEIKKLQQKLKVTTIYVTHDQV--EAMTMGDRIAVMN-RGQLLQ 222 (372)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESCHH--HHHHHCSEEEEEE-TTEEEE
T ss_pred HHHHHHHHHHHhCCCEEEEEeCCHH--HHHHhCCEEEEEE-CCEEEE
Confidence 4555666776776777765543210 1112345566665 687753
No 254
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=34.57 E-value=56 Score=21.96 Aligned_cols=52 Identities=13% Similarity=0.108 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHCCCcEE-EccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 23 NFATCSRLVKEAASAGAKLL-CFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlv-v~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
+.+...++.+.|.+.|+|-+ +.|=+.. ... ......+.+..+|...+++|++
T Consensus 76 ~t~~ai~la~~A~~~Gadavlv~~P~y~-~~~-----------s~~~l~~~f~~va~a~~lPiil 128 (293)
T 1w3i_A 76 NLDDAIRLAKLSKDFDIVGIASYAPYYY-PRM-----------SEKHLVKYFKTLCEVSPHPVYL 128 (293)
T ss_dssp CHHHHHHHHHHGGGSCCSEEEEECCCSC-SSC-----------CHHHHHHHHHHHHHHCSSCEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEEcCCCCC-CCC-----------CHHHHHHHHHHHHhhCCCCEEE
Confidence 34566777888888899844 3333322 001 1235667777777776666643
No 255
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=34.56 E-value=43 Score=22.70 Aligned_cols=20 Identities=40% Similarity=0.428 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHCCCcEE
Q 033342 23 NFATCSRLVKEAASAGAKLL 42 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlv 42 (121)
+.+...++.+.|.+.|+|-+
T Consensus 95 ~t~~ai~la~~a~~~Gadav 114 (304)
T 3l21_A 95 DTAHSIRLAKACAAEGAHGL 114 (304)
T ss_dssp CHHHHHHHHHHHHHHTCSEE
T ss_pred CHHHHHHHHHHHHHcCCCEE
Confidence 35666777777877888843
No 256
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=34.55 E-value=56 Score=22.22 Aligned_cols=22 Identities=32% Similarity=0.416 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHCCCcEEEc
Q 033342 23 NFATCSRLVKEAASAGAKLLCF 44 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlvv~ 44 (121)
+.+...++.+.|.+.|+|-++.
T Consensus 87 ~t~~ai~la~~A~~~Gadavlv 108 (313)
T 3dz1_A 87 GFAAMRRLARLSMDAGAAGVMI 108 (313)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEE
Confidence 4566677778888889985443
No 257
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=34.51 E-value=31 Score=20.01 Aligned_cols=17 Identities=29% Similarity=0.522 Sum_probs=13.3
Q ss_pred EEEEEECCCCCEEeeee
Q 033342 101 NTHVLLDDAGNIRSTYR 117 (121)
Q Consensus 101 Ns~~~i~~~G~i~~~y~ 117 (121)
=+.++++++|+++..+.
T Consensus 119 P~~~lid~~G~i~~~~~ 135 (158)
T 3eyt_A 119 PSLLLIDKAGDLRAHHF 135 (158)
T ss_dssp SEEEEECTTSEEEEEEE
T ss_pred CEEEEECCCCCEEEEEe
Confidence 35799999999877653
No 258
>3u0o_A Selenide, water dikinase; ATP binding protein, selenophosphate synthesis, transferase; 2.25A {Escherichia coli}
Probab=34.50 E-value=68 Score=22.12 Aligned_cols=33 Identities=12% Similarity=0.109 Sum_probs=24.5
Q ss_pred hHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEE
Q 033342 68 PIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTH 103 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~ 103 (121)
++.+-+.+.|+++++.++.|.... .++..|+.+
T Consensus 120 ~i~~Gi~~~~~~~gv~lvGGdt~~---~~~~~~~~t 152 (347)
T 3u0o_A 120 EVTEGGRYACRQAGIALAGGHSID---APEPIFGLA 152 (347)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEE---CSSCEEEEE
T ss_pred HHHHHHHHHHHHcCCEEEcceecc---CCCcEEEEE
Confidence 467788999999999999997665 333456554
No 259
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=34.44 E-value=34 Score=19.52 Aligned_cols=18 Identities=22% Similarity=0.089 Sum_probs=14.0
Q ss_pred eEEEEEEECCCCCEEeee
Q 033342 99 LCNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 99 ~~Ns~~~i~~~G~i~~~y 116 (121)
.+-+.++++++|+++...
T Consensus 113 ~~P~~~lid~~G~i~~~~ 130 (142)
T 3eur_A 113 AIPTLYLLDKNKTVLLKD 130 (142)
T ss_dssp TCSEEEEECTTCBEEEEE
T ss_pred cCCeEEEECCCCcEEecC
Confidence 356789999999987653
No 260
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=34.41 E-value=27 Score=21.16 Aligned_cols=16 Identities=13% Similarity=0.289 Sum_probs=13.5
Q ss_pred EEEEECCCCCEEeeee
Q 033342 102 THVLLDDAGNIRSTYR 117 (121)
Q Consensus 102 s~~~i~~~G~i~~~y~ 117 (121)
+.++|+++|+++..|.
T Consensus 149 ~~~lid~~G~i~~~~~ 164 (181)
T 2p31_A 149 WKYLVAPDGKVVGAWD 164 (181)
T ss_dssp CEEEECTTSCEEEEEC
T ss_pred eEEEEcCCCCEEEEeC
Confidence 7899999999987664
No 261
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=34.40 E-value=72 Score=21.90 Aligned_cols=53 Identities=9% Similarity=0.165 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHCCCc-EEEccCC-ccCCCCCCchhhhcccCCCChHHHHHHHHHH------HcCcEEEe
Q 033342 24 FATCSRLVKEAASAGAK-LLCFPEN-FSYVGDKDADNIKIAEPLDGPIMQGYCSLAR------ESSMWLSL 86 (121)
Q Consensus 24 ~~~~~~~~~~a~~~~~d-lvv~PE~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~------~~~~~ii~ 86 (121)
++.+++.+......+.. +++++-- ..++|.. .+.+.+..+.++|+ ++++.++.
T Consensus 164 ~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~----------~~~~~l~~l~~~~~~~~~~~~~~~~li~ 224 (418)
T 3rq1_A 164 HEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYS----------IEDKDWDSILNFLKDLVAIGRNNVIIGI 224 (418)
T ss_dssp HHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCC----------CCHHHHHHHHHHHHHHHHTSSCEEEEEE
T ss_pred HHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCC----------CCHHHHHHHHHHHHHhhhccCCCeEEEE
Confidence 44555555443333455 6666544 3445543 23344667777777 77877764
No 262
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=34.33 E-value=33 Score=18.65 Aligned_cols=23 Identities=9% Similarity=-0.188 Sum_probs=18.9
Q ss_pred CCChHHHHHHHHHHHcCcEEEec
Q 033342 65 LDGPIMQGYCSLARESSMWLSLG 87 (121)
Q Consensus 65 ~~~~~~~~l~~~a~~~~~~ii~G 87 (121)
..+.....+.+.|+++|++|+-.
T Consensus 24 G~~~~A~~I~~~A~e~~VPi~e~ 46 (83)
T 3bzy_B 24 GKDAKALQIIKLAELYDIPVIED 46 (83)
T ss_dssp EETHHHHHHHHHHHHTTCCEEEC
T ss_pred eCcHHHHHHHHHHHHcCCCEEeC
Confidence 35778889999999999998543
No 263
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=34.19 E-value=36 Score=19.89 Aligned_cols=18 Identities=22% Similarity=0.320 Sum_probs=13.5
Q ss_pred EEEEEEECCCCCEEeeee
Q 033342 100 CNTHVLLDDAGNIRSTYR 117 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y~ 117 (121)
+-+.++++++|+++..+.
T Consensus 116 ~P~~~lid~~G~i~~~~~ 133 (158)
T 3hdc_A 116 LPDTFIVDRKGIIRQRVT 133 (158)
T ss_dssp SSEEEEECTTSBEEEEEE
T ss_pred cceEEEEcCCCCEEEEEe
Confidence 346789999999876653
No 264
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=34.17 E-value=25 Score=20.18 Aligned_cols=16 Identities=25% Similarity=0.370 Sum_probs=12.8
Q ss_pred EEEEEEECCCCCEEee
Q 033342 100 CNTHVLLDDAGNIRST 115 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~ 115 (121)
+-+.++++++|+++.+
T Consensus 114 ~P~~~lid~~G~i~~~ 129 (143)
T 4fo5_A 114 GFKNFLINDEGVIIAA 129 (143)
T ss_dssp CCCEEEECTTSBEEEE
T ss_pred CCcEEEECCCCEEEEc
Confidence 4568999999998765
No 265
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12
Probab=34.11 E-value=40 Score=22.17 Aligned_cols=64 Identities=16% Similarity=0.168 Sum_probs=30.8
Q ss_pred CCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEe
Q 033342 37 AGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRS 114 (121)
Q Consensus 37 ~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~ 114 (121)
.+++++++=|-+. +-+.. ......+.+.++.++ +..|++-+-... .-..+.+..+++. +|+++.
T Consensus 163 ~~p~lllLDEPts--~LD~~--------~~~~l~~~l~~l~~~-g~tiiivtHd~~--~~~~~~d~v~~l~-~G~i~~ 226 (256)
T 1vpl_A 163 VNPRLAILDEPTS--GLDVL--------NAREVRKILKQASQE-GLTILVSSHNML--EVEFLCDRIALIH-NGTIVE 226 (256)
T ss_dssp TCCSEEEEESTTT--TCCHH--------HHHHHHHHHHHHHHT-TCEEEEEECCHH--HHTTTCSEEEEEE-TTEEEE
T ss_pred cCCCEEEEeCCcc--ccCHH--------HHHHHHHHHHHHHhC-CCEEEEEcCCHH--HHHHHCCEEEEEE-CCEEEE
Confidence 4667777777543 21110 112344555565543 666655533211 1123345566675 687753
No 266
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=34.10 E-value=27 Score=21.65 Aligned_cols=43 Identities=9% Similarity=0.103 Sum_probs=23.1
Q ss_pred HHHHHHHHHcCcEEEeccceeecCCCCc-----eEEEEEEECCCCCEEeeee
Q 033342 71 QGYCSLARESSMWLSLGGFQEKGSDDAR-----LCNTHVLLDDAGNIRSTYR 117 (121)
Q Consensus 71 ~~l~~~a~~~~~~ii~G~~~~~~~~~~~-----~~Ns~~~i~~~G~i~~~y~ 117 (121)
+....+++.+++..-. .+.. ..+. ...+.++|+++|+++..|.
T Consensus 115 d~~~~~~~~~gv~~~~--p~~~--~~~~~~~~~~~~~~~liD~~G~i~~~~~ 162 (200)
T 2b7k_A 115 DEVKNACKKYRVYFST--PPNV--KPGQDYLVDHSIFFYLMDPEGQFVDALG 162 (200)
T ss_dssp HHHHHHHHHTTC------------------CTTTCCCEEEECTTSCEEEEEC
T ss_pred HHHHHHHHHcCcEEee--cccc--CCCCCceeeecceEEEECCCCcEEEEeC
Confidence 4567778888875311 1110 0111 1237899999999987763
No 267
>1vq8_K 50S ribosomal protein L14P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: b.39.1.1 PDB: 1vq4_K* 1vq5_K* 1vq6_K* 1vq7_K* 1s72_K* 1vq9_K* 1vqk_K* 1vql_K* 1vqm_K* 1vqn_K* 1vqo_K* 1vqp_K* 1yhq_K* 1yi2_K* 1yij_K* 1yit_K* 1yj9_K* 1yjn_K* 1yjw_K* 2otj_K* ...
Probab=34.09 E-value=16 Score=21.93 Aligned_cols=15 Identities=33% Similarity=0.559 Sum_probs=13.0
Q ss_pred EEEEEECCCCCEEee
Q 033342 101 NTHVLLDDAGNIRST 115 (121)
Q Consensus 101 Ns~~~i~~~G~i~~~ 115 (121)
|++++++++|+..++
T Consensus 93 NA~Vlin~~g~p~GT 107 (132)
T 1vq8_K 93 NAAVIVDENEDPRGT 107 (132)
T ss_dssp CEEEEECTTSCBSSS
T ss_pred ceEEEECCCCCEeEE
Confidence 999999999987664
No 268
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=33.82 E-value=31 Score=19.59 Aligned_cols=17 Identities=18% Similarity=0.081 Sum_probs=13.1
Q ss_pred EEEEEEECCCCCEEeee
Q 033342 100 CNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y 116 (121)
+=+.++++++|+++..+
T Consensus 112 ~P~~~lid~~G~i~~~~ 128 (148)
T 3hcz_A 112 TPVLYVLDKNKVIIAKR 128 (148)
T ss_dssp SCEEEEECTTCBEEEES
T ss_pred CCEEEEECCCCcEEEec
Confidence 44688999999987654
No 269
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=33.65 E-value=96 Score=20.89 Aligned_cols=45 Identities=18% Similarity=0.161 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHCCCc-EEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEec
Q 033342 26 TCSRLVKEAASAGAK-LLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLG 87 (121)
Q Consensus 26 ~~~~~~~~a~~~~~d-lvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G 87 (121)
...+.++++.+.|+. +|++.+.+. ..-.+.+.+.|+++++.++.+
T Consensus 83 ~~~~~v~ea~~~Gi~~vVi~t~G~~-----------------~~~~~~l~~~A~~~gi~viGP 128 (297)
T 2yv2_A 83 FAPDAVYEAVDAGIRLVVVITEGIP-----------------VHDTMRFVNYARQKGATIIGP 128 (297)
T ss_dssp GHHHHHHHHHHTTCSEEEECCCCCC-----------------HHHHHHHHHHHHHHTCEEECS
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCC-----------------HHHHHHHHHHHHHcCCEEEcC
Confidence 344555666666777 454444332 112567888999999977533
No 270
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=33.59 E-value=64 Score=21.62 Aligned_cols=39 Identities=13% Similarity=0.146 Sum_probs=23.9
Q ss_pred CCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHc--CcEEEe
Q 033342 38 GAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARES--SMWLSL 86 (121)
Q Consensus 38 ~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~--~~~ii~ 86 (121)
++++|++.-...++|.. .+.+.++.+.++|+++ ++.++.
T Consensus 157 ~~~~v~~~~~~nptG~~----------~~~~~l~~i~~~~~~~~~~~~li~ 197 (367)
T 3euc_A 157 QPAIVYLAYPNNPTGNL----------FDAADMEAIVRAAQGSVCRSLVVV 197 (367)
T ss_dssp CCSEEEEESSCTTTCCC----------CCHHHHHHHHHHTBTTSCBCEEEE
T ss_pred CCCEEEEcCCCCCCCCC----------CCHHHHHHHHHhhhhcCCCcEEEE
Confidence 67787774323323432 1224577888889998 887754
No 271
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=33.57 E-value=59 Score=22.28 Aligned_cols=17 Identities=6% Similarity=0.214 Sum_probs=14.5
Q ss_pred HHHHHHHHHHcCcEEEe
Q 033342 70 MQGYCSLARESSMWLSL 86 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~ 86 (121)
++.+.++|+++++.++.
T Consensus 182 l~~i~~l~~~~~~~li~ 198 (423)
T 3lvm_A 182 IAAIGEMCRARGIIYHV 198 (423)
T ss_dssp HHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHcCCEEEE
Confidence 67799999999998865
No 272
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=33.55 E-value=31 Score=21.08 Aligned_cols=26 Identities=15% Similarity=0.264 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHCCCcEEEccCCcc
Q 033342 24 FATCSRLVKEAASAGAKLLCFPENFS 49 (121)
Q Consensus 24 ~~~~~~~~~~a~~~~~dlvv~PE~~~ 49 (121)
.+.+.+.++++.+.++|+|+.-=...
T Consensus 55 ~~~I~~~l~~a~~~~~DlVittGG~g 80 (167)
T 2g2c_A 55 YDTVVEAIATALKQGARFIITAGGTG 80 (167)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEESCCS
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 34666666666665699998765554
No 273
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=33.16 E-value=28 Score=20.14 Aligned_cols=17 Identities=24% Similarity=0.327 Sum_probs=13.2
Q ss_pred EEEEEEECCCCCEEeee
Q 033342 100 CNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y 116 (121)
+-+.++++++|+++..+
T Consensus 110 ~P~~~lid~~G~i~~~~ 126 (152)
T 2lrn_A 110 FPHIILVDPEGKIVAKE 126 (152)
T ss_dssp SCEEEEECTTSEEEEEC
T ss_pred CCeEEEECCCCeEEEee
Confidence 45678999999987664
No 274
>3v2d_O 50S ribosomal protein L14; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 2j03_O 2jl6_O 2jl8_O 2v47_O 2v49_O 2wdi_O 2wdj_O 2wdl_O 2wdn_O 2wh2_O 2wh4_O 2wrj_O 2wrl_O 2wro_O 2wrr_O 2x9s_O 2x9u_O 2xg0_O 2xg2_O 2xqe_O ...
Probab=33.12 E-value=17 Score=21.49 Aligned_cols=15 Identities=27% Similarity=0.408 Sum_probs=13.0
Q ss_pred EEEEEECCCCCEEee
Q 033342 101 NTHVLLDDAGNIRST 115 (121)
Q Consensus 101 Ns~~~i~~~G~i~~~ 115 (121)
|++++++++|+..++
T Consensus 82 Na~Vlin~~~~p~GT 96 (122)
T 3v2d_O 82 NAAVIINNQLEPRGT 96 (122)
T ss_dssp CEEEEECTTSCBSSS
T ss_pred cEEEEECCCCCEeee
Confidence 999999999987664
No 275
>2onk_A Molybdate/tungstate ABC transporter, ATP-binding protein; membrane protein; 3.10A {Archaeoglobus fulgidus} SCOP: c.37.1.12
Probab=33.02 E-value=11 Score=24.64 Aligned_cols=44 Identities=16% Similarity=0.100 Sum_probs=21.8
Q ss_pred hHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEe
Q 033342 68 PIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRS 114 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~ 114 (121)
...+.+.+++++.+..+++-+.... .-..+.+..+++. +|+++.
T Consensus 164 ~~~~~l~~l~~~~g~tvi~vtHd~~--~~~~~~d~i~~l~-~G~i~~ 207 (240)
T 2onk_A 164 VLMEELRFVQREFDVPILHVTHDLI--EAAMLADEVAVML-NGRIVE 207 (240)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESCHH--HHHHHCSEEEEEE-TTEEEE
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCHH--HHHHhCCEEEEEE-CCEEEE
Confidence 3445566666554555554432210 1113345566675 687753
No 276
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=32.93 E-value=26 Score=20.29 Aligned_cols=17 Identities=18% Similarity=0.038 Sum_probs=13.1
Q ss_pred EEEEEECCCCCEEeeee
Q 033342 101 NTHVLLDDAGNIRSTYR 117 (121)
Q Consensus 101 Ns~~~i~~~G~i~~~y~ 117 (121)
=+.++++++|+++..|.
T Consensus 107 P~~~lid~~G~i~~~~~ 123 (151)
T 3raz_A 107 PFTVVEAPKCGYRQTIT 123 (151)
T ss_dssp SEEEEEETTTTEEEECC
T ss_pred CEEEEECCCCcEEEEEC
Confidence 36789999999876653
No 277
>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}
Probab=32.84 E-value=74 Score=18.45 Aligned_cols=41 Identities=12% Similarity=0.083 Sum_probs=24.8
Q ss_pred HHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEeee
Q 033342 70 MQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~~y 116 (121)
++...+-+++.++.++.+ ... ...| -.+++-+|+|..+..+
T Consensus 109 vda~~~~l~~~Gv~~~~~-p~~--~~~g---~~~~f~DPdGn~iel~ 149 (155)
T 4g6x_A 109 IAAEYERLSALGVRFTQE-PTD--MGPV---VTAILDDTCGNLIQLM 149 (155)
T ss_dssp HHHHHHHHHHTTCCEEEE-EEE--CSSC---EEEEEECSSSCEEEEE
T ss_pred hhhhhhHHhcCCcEEeeC-CEE--cCCe---EEEEEECCCCCEEEEE
Confidence 344445556678877554 222 1334 2467899999887665
No 278
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=32.69 E-value=57 Score=21.11 Aligned_cols=18 Identities=33% Similarity=0.388 Sum_probs=13.0
Q ss_pred HHHHHHHHCCCcEEEccC
Q 033342 29 RLVKEAASAGAKLLCFPE 46 (121)
Q Consensus 29 ~~~~~a~~~~~dlvv~PE 46 (121)
+.++.|.+.|+|.|+.|.
T Consensus 80 d~~~~A~~aGAd~v~~p~ 97 (224)
T 1vhc_A 80 EQVVLAKSSGADFVVTPG 97 (224)
T ss_dssp HHHHHHHHHTCSEEECSS
T ss_pred HHHHHHHHCCCCEEEECC
Confidence 455566677899998885
No 279
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=32.68 E-value=1.3e+02 Score=21.12 Aligned_cols=17 Identities=18% Similarity=0.208 Sum_probs=14.3
Q ss_pred HHHHHHHHHHcCcEEEe
Q 033342 70 MQGYCSLARESSMWLSL 86 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~ 86 (121)
++.+.++|+++++.+++
T Consensus 185 l~~i~~la~~~g~~liv 201 (414)
T 3ndn_A 185 IAAVTELAHAAGAKVVL 201 (414)
T ss_dssp HHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCEEEE
Confidence 67899999999988865
No 280
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=32.54 E-value=23 Score=24.58 Aligned_cols=63 Identities=14% Similarity=-0.032 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHH-C-CCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccc
Q 033342 24 FATCSRLVKEAAS-A-GAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGF 89 (121)
Q Consensus 24 ~~~~~~~~~~a~~-~-~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~ 89 (121)
+..+...+++... . ++++||.=-..+..+.. . ..-....-.++...|..+|++++++|++-+-
T Consensus 140 i~~i~~~ir~l~~~~gg~~lIVIDyLqlm~~~~--~-~~~r~~ei~~isr~LK~lAkel~vpVi~lsQ 204 (338)
T 4a1f_A 140 IEQIRLQLRKLKSQHKELGIAFIDYLQLMSGSK--A-TKERHEQIAEISRELKTLARELEIPIIALVQ 204 (338)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEEEEECCCTHH--H-HHHCCCCHHHHHHHHHHHHHHHTSCEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEechHHhcCCC--C-CCChHHHHHHHHHHHHHHHHHcCCeEEEEEe
Confidence 4455555554433 3 67888776655521110 0 0011112346788899999999999976643
No 281
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=32.40 E-value=40 Score=19.35 Aligned_cols=17 Identities=18% Similarity=0.243 Sum_probs=13.4
Q ss_pred EEEEEEECCCCCEEeee
Q 033342 100 CNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y 116 (121)
+-+.++++++|+++..+
T Consensus 107 ~P~~~lid~~G~i~~~~ 123 (154)
T 3kcm_A 107 VPETFVIDRHGVILKKV 123 (154)
T ss_dssp BCEEEEECTTSBEEEEE
T ss_pred CCeEEEECCCCcEEEEE
Confidence 44689999999987654
No 282
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=32.19 E-value=36 Score=19.61 Aligned_cols=18 Identities=11% Similarity=0.257 Sum_probs=13.9
Q ss_pred EEEEEEECCCCCEEeeee
Q 033342 100 CNTHVLLDDAGNIRSTYR 117 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y~ 117 (121)
+-+.++++++|+++..+.
T Consensus 110 ~P~~~lid~~G~i~~~~~ 127 (154)
T 3ia1_A 110 QPWTFVVDREGKVVALFA 127 (154)
T ss_dssp SCEEEEECTTSEEEEEEE
T ss_pred ccEEEEECCCCCEEEEEc
Confidence 457799999999877653
No 283
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=32.18 E-value=41 Score=19.27 Aligned_cols=18 Identities=22% Similarity=0.252 Sum_probs=13.7
Q ss_pred EEEEEEECCCCCEEeeee
Q 033342 100 CNTHVLLDDAGNIRSTYR 117 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y~ 117 (121)
+-+.++++++|+++..+.
T Consensus 106 ~P~~~lid~~G~i~~~~~ 123 (152)
T 3gl3_A 106 MPTSFLIDRNGKVLLQHV 123 (152)
T ss_dssp SSEEEEECTTSBEEEEEE
T ss_pred CCeEEEECCCCCEEEEEc
Confidence 446789999999876653
No 284
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=32.08 E-value=1.2e+02 Score=20.82 Aligned_cols=45 Identities=18% Similarity=0.070 Sum_probs=24.2
Q ss_pred HHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHH
Q 033342 29 RLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLAR 78 (121)
Q Consensus 29 ~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~ 78 (121)
+.++...+.|+|.|.+.+.+. ....++.+.++.. ++...+.+..+
T Consensus 201 ~~~~~~i~aGad~i~i~D~~~-~~lsp~~f~ef~~----p~~k~i~~~i~ 245 (367)
T 1r3s_A 201 PYLVGQVVAGAQALQLFESHA-GHLGPQLFNKFAL----PYIRDVAKQVK 245 (367)
T ss_dssp HHHHHHHHTTCSEEEEEETTG-GGSCHHHHHHHTH----HHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEecCcc-ccCCHHHHHHHhH----HHHHHHHHHHh
Confidence 333444567999998888765 2223333333333 45555555444
No 285
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=32.08 E-value=21 Score=20.89 Aligned_cols=17 Identities=6% Similarity=0.108 Sum_probs=13.3
Q ss_pred EEEEEEECCCCCEEeee
Q 033342 100 CNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y 116 (121)
+-+.++++++|+++..+
T Consensus 114 ~P~~~lid~~G~i~~~~ 130 (152)
T 2lrt_A 114 LPSVFLVNRNNELSARG 130 (152)
T ss_dssp CSEEEEEETTTEEEEET
T ss_pred CceEEEECCCCeEEEec
Confidence 44789999999987654
No 286
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=32.07 E-value=20 Score=24.82 Aligned_cols=19 Identities=0% Similarity=-0.043 Sum_probs=15.8
Q ss_pred hHHHHHHHHHHHcCcEEEe
Q 033342 68 PIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~ 86 (121)
+.++.+.++|+++++.++.
T Consensus 201 ~~l~~l~~~~~~~~~~li~ 219 (404)
T 2o1b_A 201 EVFDEAIAKFKGTDTKIVH 219 (404)
T ss_dssp HHHHHHHHHHTTSSCEEEE
T ss_pred HHHHHHHHHHHHcCCEEEE
Confidence 4678899999999988865
No 287
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=32.00 E-value=45 Score=22.98 Aligned_cols=30 Identities=20% Similarity=0.277 Sum_probs=25.4
Q ss_pred cCHHHHHHHHHHHHHHHHHCCCcEEEccCC
Q 033342 18 NDLAANFATCSRLVKEAASAGAKLLCFPEN 47 (121)
Q Consensus 18 ~~~~~n~~~~~~~~~~a~~~~~dlvv~PE~ 47 (121)
.+.+++++++.+.++.|++.|.++.+-+|.
T Consensus 130 ~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~ 159 (337)
T 3ble_A 130 KTPKEFFTDVSFVIEYAIKSGLKINVYLED 159 (337)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEEEEE
Confidence 467888999999999998889888887776
No 288
>2yyb_A Hypothetical protein TTHA1606; structural genomics, unknown function; 2.60A {Thermus thermophilus}
Probab=31.97 E-value=1.1e+02 Score=20.02 Aligned_cols=51 Identities=8% Similarity=-0.016 Sum_probs=31.1
Q ss_pred HHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEecc
Q 033342 28 SRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGG 88 (121)
Q Consensus 28 ~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~ 88 (121)
.+.+++|.+.++|+|+.-.-.++ +.. .. ...........+.++++.+..-.
T Consensus 47 ~~vi~eAi~~~adlIitHHp~~f-~~~-----~~----~~~~~~~~i~~li~~~I~ly~~H 97 (242)
T 2yyb_A 47 EAIFRKALEEEVDFLIVHHGLFW-GKP-----FP----IVGHHKRRLETLFQGGINLYAAH 97 (242)
T ss_dssp HHHHHHHHHTTCSEEEEEECSCS-SCC-----CC----SCHHHHHHHHHHHHTTCEEEECS
T ss_pred HHHHHHHHHCCCCEEEECCCcCc-Ccc-----cc----cccHHHHHHHHHHHCCCeEEEec
Confidence 45667888999999998876663 221 11 22334445555666777775443
No 289
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=31.94 E-value=1.2e+02 Score=20.51 Aligned_cols=37 Identities=8% Similarity=-0.094 Sum_probs=19.6
Q ss_pred CcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEE
Q 033342 39 AKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLS 85 (121)
Q Consensus 39 ~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii 85 (121)
..++++|-...++|... +.+.++.+.++|+++++.++
T Consensus 170 ~~~~~~~~~~nptG~~~----------~~~~l~~i~~~~~~~~~~li 206 (394)
T 2ay1_A 170 DMVLLHGCCHNPTGANL----------TLDQWAEIASILEKTGALPL 206 (394)
T ss_dssp CEEEEESSSCTTTCCCC----------CHHHHHHHHHHHHHHTCEEE
T ss_pred CEEEEeCCCCCCCCCCC----------CHHHHHHHHHHHHHCCCEEE
Confidence 44555566555445321 22345566666666666554
No 290
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=31.67 E-value=1e+02 Score=19.70 Aligned_cols=18 Identities=17% Similarity=0.255 Sum_probs=12.1
Q ss_pred HHHHHHHHHCCCcEEEcc
Q 033342 28 SRLVKEAASAGAKLLCFP 45 (121)
Q Consensus 28 ~~~~~~a~~~~~dlvv~P 45 (121)
.+.++.+.+.|+|.|++|
T Consensus 98 ~~~~~~~~~~Gad~v~~~ 115 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVV 115 (248)
T ss_dssp HHHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHHCCCCEEEEC
Confidence 455566666678877776
No 291
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2}
Probab=31.66 E-value=87 Score=19.25 Aligned_cols=45 Identities=13% Similarity=-0.016 Sum_probs=29.1
Q ss_pred HCCCc--EEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEecc
Q 033342 36 SAGAK--LLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGG 88 (121)
Q Consensus 36 ~~~~d--lvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~ 88 (121)
..+++ +||+=|.....+.... ......+.+.+++++.++.+++-+
T Consensus 119 ~~~~~~~llilDe~~~~~~~d~~--------~~~~~~~~l~~~~~~~~~~vi~~~ 165 (235)
T 2w0m_A 119 KLGYGKARLVIDSVSALFLDKPA--------MARKISYYLKRVLNKWNFTIYATS 165 (235)
T ss_dssp HHCSSCEEEEEETGGGGSSSCGG--------GHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred hhCCCceEEEEECchHhhcCCHH--------HHHHHHHHHHHHHHhCCCeEEEEe
Confidence 45899 9999998852211110 123566778888888887776553
No 292
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=31.54 E-value=1.2e+02 Score=20.51 Aligned_cols=17 Identities=24% Similarity=0.559 Sum_probs=14.2
Q ss_pred HHHHHHHHHHcCcEEEe
Q 033342 70 MQGYCSLARESSMWLSL 86 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~ 86 (121)
++.+.++|+++++.++.
T Consensus 196 ~~~i~~l~~~~~~~li~ 212 (401)
T 1fc4_A 196 LKGVCDLADKYDALVMV 212 (401)
T ss_dssp HHHHHHHHHHTTEEEEE
T ss_pred HHHHHHHHHHcCCEEEE
Confidence 67889999999988764
No 293
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=31.46 E-value=37 Score=20.56 Aligned_cols=19 Identities=16% Similarity=0.163 Sum_probs=15.2
Q ss_pred eEEEEEEECCCCCEEeeee
Q 033342 99 LCNTHVLLDDAGNIRSTYR 117 (121)
Q Consensus 99 ~~Ns~~~i~~~G~i~~~y~ 117 (121)
..-+.++++++|+++..+.
T Consensus 118 ~~P~~~lid~~G~i~~~~~ 136 (187)
T 1we0_A 118 ADRGTFIIDPDGVIQAIEI 136 (187)
T ss_dssp ECEEEEEECTTSBEEEEEE
T ss_pred eeeEEEEECCCCeEEEEEe
Confidence 4568899999999987653
No 294
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=31.38 E-value=39 Score=19.65 Aligned_cols=18 Identities=22% Similarity=0.355 Sum_probs=14.2
Q ss_pred eEEEEEEECCCCCEEeee
Q 033342 99 LCNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 99 ~~Ns~~~i~~~G~i~~~y 116 (121)
.+-+.++++++|+++..+
T Consensus 116 ~~P~~~lid~~G~i~~~~ 133 (165)
T 3or5_A 116 GIPTSFVIDASGNVSGVI 133 (165)
T ss_dssp SSSEEEEECTTSBEEEEE
T ss_pred CCCeEEEECCCCcEEEEE
Confidence 356789999999987665
No 295
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=31.37 E-value=44 Score=18.82 Aligned_cols=18 Identities=17% Similarity=0.311 Sum_probs=13.9
Q ss_pred eEEEEEEECCCCCEEeee
Q 033342 99 LCNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 99 ~~Ns~~~i~~~G~i~~~y 116 (121)
.+-+.++++++|+++..+
T Consensus 110 ~~P~~~lid~~G~i~~~~ 127 (148)
T 2b5x_A 110 YVPAYYVFDKTGQLRHFQ 127 (148)
T ss_dssp CSSEEEEECTTCBEEEEE
T ss_pred CCCEEEEECCCCcEEEEe
Confidence 345789999999987655
No 296
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=31.31 E-value=1.4e+02 Score=21.10 Aligned_cols=39 Identities=13% Similarity=0.314 Sum_probs=29.7
Q ss_pred cEEEEEEec-----c---ccCHHHHHHHHHHHHHHHHHCCCcEEEcc
Q 033342 7 VRVAVAQMT-----S---INDLAANFATCSRLVKEAASAGAKLLCFP 45 (121)
Q Consensus 7 ~~ia~vQ~~-----~---~~~~~~n~~~~~~~~~~a~~~~~dlvv~P 45 (121)
+++..++.. + ..+.++.++.+.+.++.+++.|+.+|+..
T Consensus 78 L~i~~i~s~~~~~~i~~~~~~r~~~ie~~k~~i~~aa~lGi~~v~~n 124 (386)
T 3bdk_A 78 LEITVIESIPVHEDIKQGKPNRDALIENYKTSIRNVGAAGIPVVCYN 124 (386)
T ss_dssp CEEEEEECCCCCHHHHTTCTTHHHHHHHHHHHHHHHHTTTCCEEEEC
T ss_pred CEEEEEeccccccccccCcHHHHHHHHHHHHHHHHHHHcCCCEEEEc
Confidence 677766532 1 24578889999999999999999999863
No 297
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=31.26 E-value=1e+02 Score=21.99 Aligned_cols=62 Identities=11% Similarity=0.033 Sum_probs=34.6
Q ss_pred HHHHHHHHHHH-HCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEecc
Q 033342 25 ATCSRLVKEAA-SAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGG 88 (121)
Q Consensus 25 ~~~~~~~~~a~-~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~ 88 (121)
..+...+++.. ..++++||+=+.......... . .-....-..+...|..+|+++++++++-+
T Consensus 299 ~~i~~~~~~l~~~~~~~livID~l~~~~~~~~~-~-~~~~~~i~~i~~~Lk~lAke~~i~vi~~s 361 (454)
T 2r6a_A 299 SDIRAKCRRLKQESGLGMIVIDYLQLIQGSGRS-K-ENRQQEVSEISRSLKALARELEVPVIALS 361 (454)
T ss_dssp HHHHHHHHHHHTTTCCCEEEEECGGGSCCSCC------CHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEccHHHhccCCCC-C-CCHHHHHHHHHHHHHHHHHHhCCeEEEEe
Confidence 33444444433 358999999998872221100 0 00000113567778999999998876653
No 298
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=31.23 E-value=99 Score=20.39 Aligned_cols=19 Identities=16% Similarity=0.338 Sum_probs=15.7
Q ss_pred hHHHHHHHHHHHcCcEEEe
Q 033342 68 PIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~ 86 (121)
+.++.+.++|+++++.++.
T Consensus 164 ~~l~~i~~~~~~~~~~li~ 182 (359)
T 1svv_A 164 QELEDISASCKEHGLYLFL 182 (359)
T ss_dssp HHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHhCCEEEE
Confidence 5678899999999988864
No 299
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=31.20 E-value=30 Score=19.88 Aligned_cols=18 Identities=39% Similarity=0.538 Sum_probs=13.8
Q ss_pred EEEEEEECCCCCEEeeee
Q 033342 100 CNTHVLLDDAGNIRSTYR 117 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y~ 117 (121)
+-+.++++++|+++..|.
T Consensus 107 ~P~~~lid~~G~i~~~~~ 124 (153)
T 2l5o_A 107 YPTSVLIGKKGEILKTYV 124 (153)
T ss_dssp SSEEEEECSSSCCCEEEE
T ss_pred cCeEEEECCCCcEEEEEc
Confidence 457889999999876653
No 300
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=31.15 E-value=35 Score=19.32 Aligned_cols=18 Identities=28% Similarity=0.349 Sum_probs=13.8
Q ss_pred eEEEEEEECCCCCEEeee
Q 033342 99 LCNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 99 ~~Ns~~~i~~~G~i~~~y 116 (121)
.+=+.++++++|+++..+
T Consensus 114 ~~P~~~lid~~G~i~~~~ 131 (148)
T 3fkf_A 114 TLPTNILLSPTGKILARD 131 (148)
T ss_dssp SSSEEEEECTTSBEEEES
T ss_pred CcCEEEEECCCCeEEEec
Confidence 345689999999987654
No 301
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=31.14 E-value=1.2e+02 Score=20.31 Aligned_cols=46 Identities=20% Similarity=0.117 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHCCCc-EEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEec
Q 033342 25 ATCSRLVKEAASAGAK-LLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLG 87 (121)
Q Consensus 25 ~~~~~~~~~a~~~~~d-lvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G 87 (121)
+...+.++++.+.|+. +|++.+.+. ....+.+.+.|+++++.++.+
T Consensus 75 ~~~~~~~~ea~~~Gi~~vVi~t~G~~-----------------~~~~~~l~~~a~~~gi~vigP 121 (288)
T 1oi7_A 75 PAAADAALEAAHAGIPLIVLITEGIP-----------------TLDMVRAVEEIKALGSRLIGG 121 (288)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCSCCC-----------------HHHHHHHHHHHHHHTCEEEES
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCC-----------------HHHHHHHHHHHHHcCCEEEeC
Confidence 3455666667777887 566665442 112567888999999977644
No 302
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=31.08 E-value=43 Score=20.14 Aligned_cols=17 Identities=29% Similarity=0.425 Sum_probs=13.6
Q ss_pred EEEEEEECCCCCEEeee
Q 033342 100 CNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y 116 (121)
+-+.++|+++|+++..+
T Consensus 133 ~P~~~lid~~G~i~~~~ 149 (176)
T 3kh7_A 133 APETYLIDKQGIIRHKI 149 (176)
T ss_dssp SCEEEEECTTCBEEEEE
T ss_pred CCeEEEECCCCeEEEEE
Confidence 45689999999987665
No 303
>3bbo_M Ribosomal protein L14; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=31.08 E-value=15 Score=21.74 Aligned_cols=15 Identities=40% Similarity=0.703 Sum_probs=12.9
Q ss_pred EEEEEECCCCCEEee
Q 033342 101 NTHVLLDDAGNIRST 115 (121)
Q Consensus 101 Ns~~~i~~~G~i~~~ 115 (121)
|++++++++|+..++
T Consensus 82 Na~Vlin~~g~p~GT 96 (121)
T 3bbo_M 82 NAAVIIDQEGNPKGT 96 (121)
T ss_dssp CEEEECCTTSSCSSS
T ss_pred ceEEEECCCCCEeEe
Confidence 999999999987664
No 304
>3ktw_A SRP19, signal recognition particle 19 kDa protein; ribonucleoprotein complex, RNA-RNA tertiary interactions, AS loop, 7S RNA; 3.20A {Sulfolobus solfataricus}
Probab=30.86 E-value=26 Score=20.29 Aligned_cols=47 Identities=13% Similarity=0.087 Sum_probs=31.8
Q ss_pred CCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEE
Q 033342 37 AGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLS 85 (121)
Q Consensus 37 ~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii 85 (121)
.+..+||||=++. . ....+-.......+.+..+.+.+.+++.|...+
T Consensus 15 ~~~~ivIyP~Y~D-s-~sr~eGRRVpk~V~nP~~~EI~~a~~~Lgl~~~ 61 (109)
T 3ktw_A 15 EENRIVIWPSYFF-S-PTRSKGRRLARIPYKIKTEELVSTLRELGLDPI 61 (109)
T ss_dssp GGTEEEECTHHHH-C-SSGGGTCCSSCCSSCCCHHHHHHHHHHTTCCCE
T ss_pred hCCeEEEeecccC-C-cchhcCCcccccCCCCCHHHHHHHHHHcCCCeE
Confidence 4678999999887 3 332221122222678889999999999887653
No 305
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=30.84 E-value=98 Score=19.20 Aligned_cols=62 Identities=3% Similarity=-0.119 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCch-hhhcc---cCCCChHHHHHHHHHHHcCcEEE
Q 033342 21 AANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDAD-NIKIA---EPLDGPIMQGYCSLARESSMWLS 85 (121)
Q Consensus 21 ~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~-~~~~~---~~~~~~~~~~l~~~a~~~~~~ii 85 (121)
..+++.+.+.+++. ..++.+++.+-... +..... ..... ...-..+.+.+.++|+++++.++
T Consensus 113 ~~~l~~li~~l~~~-~P~~~iil~~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~~v~~i 178 (232)
T 3dc7_A 113 YGALMMLLTGLQTN-WPTVPKLFISAIHI--GSDFGGSFSAVTNGLGYRQSDYEAAIAQMTADYGVPHL 178 (232)
T ss_dssp HHHHHHHHHHHHHH-CTTSCEEEEECCCC--CSCSBTTBCSSCCTTSCCHHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHh-CCCCeEEEEeCccc--CCccCCcccccccccchHHHHHHHHHHHHHHHcCCcEE
Confidence 34777777777643 33688887432221 111000 00000 00114677888999999988764
No 306
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=30.81 E-value=38 Score=21.60 Aligned_cols=17 Identities=18% Similarity=0.452 Sum_probs=13.8
Q ss_pred EEEEEEECCCCCEEeee
Q 033342 100 CNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y 116 (121)
.-+.++|+|+|++...+
T Consensus 128 ~p~~flID~~G~I~~~~ 144 (220)
T 1xcc_A 128 CRCLFFISPEKKIKATV 144 (220)
T ss_dssp CEEEEEECTTSBEEEEE
T ss_pred cceEEEECCCCEEEEEE
Confidence 45789999999987664
No 307
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=30.79 E-value=1.1e+02 Score=20.34 Aligned_cols=37 Identities=11% Similarity=0.025 Sum_probs=21.7
Q ss_pred CCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 37 AGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 37 ~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
.++.+|+++=...++|.... .+.+.++|+++++.++.
T Consensus 146 ~~~~~v~~~~~~nptG~~~~-------------~~~i~~~~~~~~~~li~ 182 (371)
T 2e7j_A 146 GEVVLALITYPDGNYGNLPD-------------VKKIAKVCSEYDVPLLV 182 (371)
T ss_dssp SCEEEEEEESSCTTTCCCCC-------------HHHHHHHHHTTTCCEEE
T ss_pred CCeEEEEEECCCCCCcccCC-------------HHHHHHHHHHcCCeEEE
Confidence 45667666554443443211 36777888888776653
No 308
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=30.76 E-value=52 Score=22.27 Aligned_cols=17 Identities=12% Similarity=0.163 Sum_probs=14.3
Q ss_pred HHHHHHHHHHcCcEEEe
Q 033342 70 MQGYCSLARESSMWLSL 86 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~ 86 (121)
++.+.++|+++++.++.
T Consensus 183 l~~i~~l~~~~~~~li~ 199 (406)
T 1kmj_A 183 LAEMITLAHQHGAKVLV 199 (406)
T ss_dssp HHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCEEEE
Confidence 77889999999988764
No 309
>2ixe_A Antigen peptide transporter 1; ABC ATPase, hydrolase; HET: ATP; 2.0A {Rattus norvegicus} PDB: 2ixg_A* 2ixf_A* 1jj7_A*
Probab=30.69 E-value=19 Score=23.92 Aligned_cols=67 Identities=15% Similarity=0.016 Sum_probs=31.6
Q ss_pred HHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEE
Q 033342 34 AASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIR 113 (121)
Q Consensus 34 a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~ 113 (121)
|...+++++++=|-+. +-+.. ....+.+.+.+++++.+..+++-+-... .-.. .+..+++. +|+++
T Consensus 170 aL~~~p~lllLDEPts--~LD~~--------~~~~i~~~l~~~~~~~g~tviivtHd~~--~~~~-~d~v~~l~-~G~i~ 235 (271)
T 2ixe_A 170 ALIRKPRLLILDNATS--ALDAG--------NQLRVQRLLYESPEWASRTVLLITQQLS--LAER-AHHILFLK-EGSVC 235 (271)
T ss_dssp HHTTCCSEEEEESTTT--TCCHH--------HHHHHHHHHHHCTTTTTSEEEEECSCHH--HHTT-CSEEEEEE-TTEEE
T ss_pred HHhcCCCEEEEECCcc--CCCHH--------HHHHHHHHHHHHHhhcCCEEEEEeCCHH--HHHh-CCEEEEEE-CCEEE
Confidence 4456788888877554 11100 1112333444443333555655433221 1112 45566675 68775
Q ss_pred e
Q 033342 114 S 114 (121)
Q Consensus 114 ~ 114 (121)
.
T Consensus 236 ~ 236 (271)
T 2ixe_A 236 E 236 (271)
T ss_dssp E
T ss_pred E
Confidence 3
No 310
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=30.53 E-value=45 Score=20.96 Aligned_cols=19 Identities=21% Similarity=0.331 Sum_probs=15.3
Q ss_pred ceEEEEEEECCCCCEEeee
Q 033342 98 RLCNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 98 ~~~Ns~~~i~~~G~i~~~y 116 (121)
...-+.++|+++|+++..+
T Consensus 137 ~~~p~~~lID~~G~I~~~~ 155 (211)
T 2pn8_A 137 HTLRGLFIIDDKGILRQIT 155 (211)
T ss_dssp EECEEEEEECTTSBEEEEE
T ss_pred cccceEEEECCCCEEEEEE
Confidence 3567889999999997665
No 311
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=30.48 E-value=89 Score=21.24 Aligned_cols=18 Identities=28% Similarity=0.324 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHCCC-c
Q 033342 23 NFATCSRLVKEAASAGA-K 40 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~-d 40 (121)
+.+...++.+.|.+.|+ |
T Consensus 87 ~t~~ai~la~~A~~~Ga~d 105 (311)
T 3h5d_A 87 DTRDSIEFVKEVAEFGGFA 105 (311)
T ss_dssp SHHHHHHHHHHHHHSCCCS
T ss_pred CHHHHHHHHHHHHhcCCCc
Confidence 45667778888888776 7
No 312
>2a40_B Deoxyribonuclease-1; WAVE, WH2, WAsp, actin, DNAse I, ARP2/3, structural protein; HET: HIC NAG ATP; 1.80A {Bos taurus} SCOP: d.151.1.1 PDB: 1dnk_A* 2a3z_B* 2a41_B* 2a42_B* 2d1k_B* 2dnj_A* 3cjc_D* 3dni_A* 1atn_D*
Probab=30.46 E-value=60 Score=20.81 Aligned_cols=23 Identities=9% Similarity=0.036 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHCCCcEEEccCCcc
Q 033342 26 TCSRLVKEAASAGAKLLCFPENFS 49 (121)
Q Consensus 26 ~~~~~~~~a~~~~~dlvv~PE~~~ 49 (121)
.+.+.+.+.. .++|||.+-|.-.
T Consensus 20 ~~~~~i~~~~-~~~DIv~LQEv~~ 42 (260)
T 2a40_B 20 TLASYIVRIV-RRYDIVLIQEVRD 42 (260)
T ss_dssp HHHHHHHHHH-TTCSEEEEEEECC
T ss_pred HHHHHHHHHh-ccCCEEEEEEEEc
Confidence 3444444332 3799999999764
No 313
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=30.39 E-value=40 Score=19.35 Aligned_cols=18 Identities=17% Similarity=0.289 Sum_probs=13.9
Q ss_pred EEEEEEECCCCCEEeeee
Q 033342 100 CNTHVLLDDAGNIRSTYR 117 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y~ 117 (121)
+-+.++++++|+++..+.
T Consensus 104 ~P~~~lid~~G~i~~~~~ 121 (151)
T 2f9s_A 104 LPTTFLINPEGKVVKVVT 121 (151)
T ss_dssp SCEEEEECTTSEEEEEEE
T ss_pred CCeEEEECCCCcEEEEEe
Confidence 457889999999876653
No 314
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=30.31 E-value=1.1e+02 Score=19.68 Aligned_cols=26 Identities=19% Similarity=0.151 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEcc
Q 033342 20 LAANFATCSRLVKEAASAGAKLLCFP 45 (121)
Q Consensus 20 ~~~n~~~~~~~~~~a~~~~~dlvv~P 45 (121)
.+..++.+.+.++.|..-|++.|+.|
T Consensus 83 r~~~~~~~~~~i~~a~~lG~~~v~~~ 108 (290)
T 2qul_A 83 RDAGTEYVKRLLDDCHLLGAPVFAGL 108 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEee
Confidence 34567888888888888899988853
No 315
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=30.28 E-value=80 Score=22.61 Aligned_cols=18 Identities=17% Similarity=0.200 Sum_probs=15.0
Q ss_pred HHHHHHHHHHcCcEEEec
Q 033342 70 MQGYCSLARESSMWLSLG 87 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~G 87 (121)
++.+.++|+++++++++=
T Consensus 258 l~~i~~la~~~~i~livD 275 (514)
T 3mad_A 258 IPEIAALAAEHGIGCHVD 275 (514)
T ss_dssp HHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHhCCeEEEe
Confidence 578999999999988653
No 316
>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A
Probab=30.27 E-value=73 Score=17.58 Aligned_cols=45 Identities=9% Similarity=-0.096 Sum_probs=25.9
Q ss_pred HHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEeeee
Q 033342 70 MQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYR 117 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~~y~ 117 (121)
++...+..++.|+.++.+-.+. ....| ...+++-+|+|..+....
T Consensus 88 i~~~~~~l~~~G~~~~~~p~~~-~~~~g--~~~~~~~dPdG~~iEl~e 132 (133)
T 3hdp_A 88 IQKSIEEMSQIGYTLFKKAEIA-PAIDN--RKVAFLFSTDIGLIELLE 132 (133)
T ss_dssp HHHHHHHHTTTTEEEEEEEEEE-GGGTT--EEEEEEEETTTEEEEEEE
T ss_pred HHHHHHHHHHcCCccccCCeec-ccCCC--ceEEEEECCCceEEEEec
Confidence 4455555667788776542222 11223 246777899998766543
No 317
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=30.25 E-value=42 Score=20.15 Aligned_cols=18 Identities=17% Similarity=0.257 Sum_probs=14.3
Q ss_pred EEEEEEECCCCCEEeeee
Q 033342 100 CNTHVLLDDAGNIRSTYR 117 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y~ 117 (121)
+-+.++|+++|+++..|.
T Consensus 147 ~P~~~lid~~G~i~~~~~ 164 (183)
T 3lwa_A 147 IPTTIVLDKQHRPAAVFL 164 (183)
T ss_dssp CSEEEEECTTSCEEEEEC
T ss_pred CCeEEEECCCCcEEEEEc
Confidence 456899999999987654
No 318
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=30.07 E-value=1.1e+02 Score=19.71 Aligned_cols=18 Identities=28% Similarity=0.326 Sum_probs=11.7
Q ss_pred HHHHHHHCCCcEEEccCC
Q 033342 30 LVKEAASAGAKLLCFPEN 47 (121)
Q Consensus 30 ~~~~a~~~~~dlvv~PE~ 47 (121)
.++++...|+|+|++--.
T Consensus 93 ~i~~~~~~Gad~V~l~~~ 110 (232)
T 3igs_A 93 DVDALAQAGAAIIAVDGT 110 (232)
T ss_dssp HHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHcCCCEEEECcc
Confidence 345566678998876443
No 319
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A
Probab=30.04 E-value=49 Score=23.78 Aligned_cols=13 Identities=23% Similarity=0.181 Sum_probs=10.2
Q ss_pred CCCcEEEccCCcc
Q 033342 37 AGAKLLCFPENFS 49 (121)
Q Consensus 37 ~~~dlvv~PE~~~ 49 (121)
.+||+|+.||.-.
T Consensus 210 ~gad~ilIPE~~f 222 (419)
T 3hno_A 210 EIPVVILFPEISF 222 (419)
T ss_dssp CCCEEEECTTSCC
T ss_pred CCceEEEeCCCCC
Confidence 3789999999653
No 320
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12
Probab=29.98 E-value=41 Score=22.15 Aligned_cols=65 Identities=18% Similarity=0.196 Sum_probs=31.1
Q ss_pred HCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEe
Q 033342 36 SAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRS 114 (121)
Q Consensus 36 ~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~ 114 (121)
..+++++++=|=+. +-+. .....+.+.+.+++++ +..+++-+.... .-..+-+..+++. +|+++.
T Consensus 169 ~~~p~lllLDEPts--~LD~--------~~~~~~~~~l~~l~~~-g~tvi~vtHd~~--~~~~~~d~v~~l~-~G~i~~ 233 (262)
T 1b0u_A 169 AMEPDVLLFDEPTS--ALDP--------ELVGEVLRIMQQLAEE-GKTMVVVTHEMG--FARHVSSHVIFLH-QGKIEE 233 (262)
T ss_dssp HTCCSEEEEESTTT--TSCH--------HHHHHHHHHHHHHHHT-TCCEEEECSCHH--HHHHHCSEEEEEE-TTEEEE
T ss_pred hcCCCEEEEeCCCc--cCCH--------HHHHHHHHHHHHHHhC-CCEEEEEeCCHH--HHHHhCCEEEEEE-CCEEEE
Confidence 44677777777553 1111 0112345556666555 555544432210 1112345566665 687753
No 321
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=29.98 E-value=1.1e+02 Score=19.68 Aligned_cols=18 Identities=33% Similarity=0.492 Sum_probs=11.9
Q ss_pred HHHHHHHCCCcEEEccCC
Q 033342 30 LVKEAASAGAKLLCFPEN 47 (121)
Q Consensus 30 ~~~~a~~~~~dlvv~PE~ 47 (121)
.+.++...|+|+|++--.
T Consensus 93 ~i~~~~~aGad~I~l~~~ 110 (229)
T 3q58_A 93 DVDALAQAGADIIAFDAS 110 (229)
T ss_dssp HHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHcCCCEEEECcc
Confidence 445566678998876443
No 322
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=29.88 E-value=40 Score=21.55 Aligned_cols=17 Identities=0% Similarity=0.114 Sum_probs=14.1
Q ss_pred EEEEEEECCCCCEEeee
Q 033342 100 CNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y 116 (121)
.-+.++|+++|++...+
T Consensus 131 ~p~~fiID~~G~I~~~~ 147 (224)
T 1prx_A 131 ARVVFVFGPDKKLKLSI 147 (224)
T ss_dssp CCEEEEECTTSBEEEEE
T ss_pred ceEEEEECCCCEEEEEE
Confidence 56889999999997665
No 323
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=29.83 E-value=47 Score=22.31 Aligned_cols=19 Identities=16% Similarity=0.053 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHCCCcE
Q 033342 23 NFATCSRLVKEAASAGAKL 41 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dl 41 (121)
+.+...++.+.|.+.|+|-
T Consensus 81 ~t~~ai~la~~a~~~Gada 99 (292)
T 2ojp_A 81 ATAEAISLTQRFNDSGIVG 99 (292)
T ss_dssp SHHHHHHHHHHTTTSSCSE
T ss_pred cHHHHHHHHHHHHhcCCCE
Confidence 3456667777777788884
No 324
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=29.74 E-value=1.3e+02 Score=20.72 Aligned_cols=21 Identities=10% Similarity=0.262 Sum_probs=17.7
Q ss_pred CChHHHHHHHHHHHcCcEEEe
Q 033342 66 DGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 66 ~~~~~~~l~~~a~~~~~~ii~ 86 (121)
+.++++.+.++|+++++.+++
T Consensus 219 ~~~~l~~l~~l~~~~~~~li~ 239 (429)
T 3k28_A 219 QPGFLEGLREVTEQNGALLIF 239 (429)
T ss_dssp CTTHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEE
Confidence 457789999999999998864
No 325
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=29.61 E-value=61 Score=22.14 Aligned_cols=20 Identities=15% Similarity=0.112 Sum_probs=16.1
Q ss_pred ChHHHHHHHHHHHcCcEEEe
Q 033342 67 GPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 67 ~~~~~~l~~~a~~~~~~ii~ 86 (121)
.+.++.+.++|+++++.++.
T Consensus 199 ~~~~~~l~~~a~~~~~~li~ 218 (417)
T 3g7q_A 199 DEELMKLDRLANQHNIPLVI 218 (417)
T ss_dssp HHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEE
Confidence 34588899999999987764
No 326
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=29.56 E-value=42 Score=20.93 Aligned_cols=17 Identities=24% Similarity=0.290 Sum_probs=13.4
Q ss_pred EEEEEEECCCCCEEeee
Q 033342 100 CNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y 116 (121)
.-+.++|+++|+++..+
T Consensus 165 ~p~~~lID~~G~I~~~~ 181 (200)
T 3zrd_A 165 ARAVVVLDGQDNVIYSE 181 (200)
T ss_dssp CCEEEEECTTSBEEEEE
T ss_pred ccEEEEECCCCeEEEEE
Confidence 45679999999997654
No 327
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=29.48 E-value=55 Score=20.13 Aligned_cols=46 Identities=9% Similarity=-0.091 Sum_probs=25.7
Q ss_pred CCcEEEccCCccCCCCCCchhhhcccC--CCChHHHHHHHHHHHcCcEEEec
Q 033342 38 GAKLLCFPENFSYVGDKDADNIKIAEP--LDGPIMQGYCSLARESSMWLSLG 87 (121)
Q Consensus 38 ~~dlvv~PE~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~a~~~~~~ii~G 87 (121)
++++||+=|........ . ..... .-......+..+++++++.+++-
T Consensus 105 ~~~lliiD~~~~~l~~~-~---~~~~~~~~~~~~~~~L~~l~~~~~~~vi~~ 152 (220)
T 2cvh_A 105 NFALVVVDSITAHYRAE-E---NRSGLIAELSRQLQVLLWIARKHNIPVIVI 152 (220)
T ss_dssp TEEEEEEECCCCCTTGG-G---GSSTTHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCEEEEcCcHHHhhhc-C---chHHHHHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 69999999977521110 0 00000 00234556888888888766544
No 328
>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}
Probab=29.30 E-value=87 Score=18.14 Aligned_cols=43 Identities=9% Similarity=-0.006 Sum_probs=27.2
Q ss_pred hHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEeee
Q 033342 68 PIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~~y 116 (121)
+-++.+.+.+++.|+.++.+ .... ..| -.+++.+|+|..+..+
T Consensus 79 ~dvd~~~~~l~~~G~~i~~~-p~~~--~~G---~~~~~~DPdG~~iel~ 121 (148)
T 3rhe_A 79 EMVDEIHRQWSDKEISIIQP-PTQM--DFG---YTFVGVDPDEHRLRIF 121 (148)
T ss_dssp HHHHHHHHHHHHTTCCEEEE-EEEE--TTE---EEEEEECTTCCEEEEE
T ss_pred HHHHHHHHHHHhCCCEEEeC-Ceec--CCC---cEEEEECCCCCEEEEE
Confidence 34666666667778877655 2221 223 4578889999877654
No 329
>2yyd_A Selenide, water dikinase; FULL-length selenophosphate synthetase, structural genomics, NPPSFA; 1.98A {Aquifex aeolicus} PDB: 2yye_A* 2zod_A 2zau_A
Probab=29.27 E-value=1.2e+02 Score=20.82 Aligned_cols=24 Identities=21% Similarity=0.200 Sum_probs=20.2
Q ss_pred hHHHHHHHHHHHcCcEEEecccee
Q 033342 68 PIMQGYCSLARESSMWLSLGGFQE 91 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~G~~~~ 91 (121)
++.+-+.+.|+++++.++.|....
T Consensus 121 ~i~~Gi~~~~~~~gv~lvGGdt~~ 144 (345)
T 2yyd_A 121 EVIRGALDKLREAKTVLLGGHTID 144 (345)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCEEEeeEccc
Confidence 467888999999999999997654
No 330
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=29.22 E-value=42 Score=21.75 Aligned_cols=17 Identities=6% Similarity=0.376 Sum_probs=13.8
Q ss_pred EEEEEEECCCCCEEeee
Q 033342 100 CNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y 116 (121)
.-+.++|+|+|++...+
T Consensus 127 ~p~~fiID~~G~I~~~~ 143 (233)
T 2v2g_A 127 CRAVFIIGPDKKLKLSI 143 (233)
T ss_dssp CEEEEEECTTSBEEEEE
T ss_pred cceEEEECCCCEEEEEE
Confidence 45789999999987665
No 331
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=29.21 E-value=49 Score=19.18 Aligned_cols=17 Identities=12% Similarity=0.354 Sum_probs=13.0
Q ss_pred EEEEEEECCCCCEEeee
Q 033342 100 CNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y 116 (121)
+-+.++++++|+++..+
T Consensus 122 ~P~~~lid~~G~i~~~~ 138 (164)
T 2h30_A 122 YPSWALIGKDGDVQRIV 138 (164)
T ss_dssp SSEEEEECTTSCEEEEE
T ss_pred cceEEEECCCCcEEEEE
Confidence 44678899999987654
No 332
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=29.11 E-value=43 Score=20.40 Aligned_cols=18 Identities=22% Similarity=0.386 Sum_probs=14.1
Q ss_pred eEEEEEEECCCCCEEeee
Q 033342 99 LCNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 99 ~~Ns~~~i~~~G~i~~~y 116 (121)
..-+.++|+++|+++..+
T Consensus 120 ~~P~~~liD~~G~i~~~~ 137 (192)
T 2h01_A 120 ALRAFVLIDKQGVVQHLL 137 (192)
T ss_dssp ECCEEEEECTTSBEEEEE
T ss_pred eeeEEEEEcCCCEEEEEE
Confidence 456789999999987654
No 333
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=28.95 E-value=1.1e+02 Score=21.07 Aligned_cols=21 Identities=19% Similarity=0.357 Sum_probs=17.7
Q ss_pred CChHHHHHHHHHHHcCcEEEe
Q 033342 66 DGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 66 ~~~~~~~l~~~a~~~~~~ii~ 86 (121)
+.++++.+.++|+++++.++.
T Consensus 218 ~~~~l~~l~~l~~~~~~~li~ 238 (427)
T 3fq8_A 218 DAGFLEGLREITLEHDALLVF 238 (427)
T ss_dssp CTTHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEE
Confidence 456789999999999998864
No 334
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=28.90 E-value=1.1e+02 Score=21.97 Aligned_cols=54 Identities=22% Similarity=0.280 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHC-CCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 23 NFATCSRLVKEAASA-GAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 23 n~~~~~~~~~~a~~~-~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
+++.+++.++.+... ++.+|++---..++|.. .+.+.++.+.++|+++++.++.
T Consensus 219 d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v----------~s~~~l~~i~~la~~~~~~li~ 273 (498)
T 3ihj_A 219 NVNELRRAVQEAKDHCDPKVLCIINPGNPTGQV----------QSRKCIEDVIHFAWEEKLFLLA 273 (498)
T ss_dssp CHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCC----------CCHHHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHhhhccCCCeEEEEECCCCCCCCc----------CCHHHHHHHHHHHHHcCcEEEE
Confidence 345555555543222 46677664212233432 2334577888888888887754
No 335
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=28.88 E-value=50 Score=18.93 Aligned_cols=17 Identities=12% Similarity=0.188 Sum_probs=13.5
Q ss_pred EEEEEEECCCCCEEeee
Q 033342 100 CNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y 116 (121)
+-+.++++++|+++..+
T Consensus 118 ~P~~~~id~~G~i~~~~ 134 (156)
T 1kng_A 118 VPETFVVGREGTIVYKL 134 (156)
T ss_dssp SCEEEEECTTSBEEEEE
T ss_pred cCeEEEEcCCCCEEEEE
Confidence 45689999999987665
No 336
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=28.83 E-value=1.3e+02 Score=20.11 Aligned_cols=39 Identities=23% Similarity=0.031 Sum_probs=22.5
Q ss_pred HHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEE
Q 033342 31 VKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLS 85 (121)
Q Consensus 31 ~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii 85 (121)
+.+|...|||.|++-=..+ ++..+..+.+.+++.|+.++
T Consensus 135 i~ea~~~GAD~VlLi~a~L----------------~~~~l~~l~~~a~~lGl~~l 173 (272)
T 3tsm_A 135 VYEARSWGADCILIIMASV----------------DDDLAKELEDTAFALGMDAL 173 (272)
T ss_dssp HHHHHHTTCSEEEEETTTS----------------CHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHcCCCEEEEccccc----------------CHHHHHHHHHHHHHcCCeEE
Confidence 5556667777777755443 22334555556666665544
No 337
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=28.81 E-value=97 Score=20.55 Aligned_cols=40 Identities=23% Similarity=0.147 Sum_probs=22.8
Q ss_pred HHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEE
Q 033342 27 CSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWL 84 (121)
Q Consensus 27 ~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i 84 (121)
+.++++.+++.|+|=++.|-+-. +..+.+.+.++++++..
T Consensus 105 ~e~F~~~~~~aGvdG~IipDLP~------------------eE~~~~~~~~~~~Gl~~ 144 (252)
T 3tha_A 105 LEKFVKKAKSLGICALIVPELSF------------------EESDDLIKECERYNIAL 144 (252)
T ss_dssp HHHHHHHHHHTTEEEEECTTCCG------------------GGCHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHcCCCEEEeCCCCH------------------HHHHHHHHHHHHcCCeE
Confidence 34455555566666666665332 22455667777777654
No 338
>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}
Probab=28.67 E-value=77 Score=18.22 Aligned_cols=46 Identities=4% Similarity=-0.206 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEeee
Q 033342 69 IMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 69 ~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~~y 116 (121)
-++.+.+.+++.|+.++.+..... ..+..+-++++.+|+|..+..+
T Consensus 99 dv~~~~~~l~~~G~~~~~~~p~~~--~~g~~~~~~~~~DPdG~~iel~ 144 (146)
T 3ct8_A 99 KVDELTQKLKERGDPILYEDRHPF--AGGPNHYAVFCEDPNRIKVEIV 144 (146)
T ss_dssp HHHHHHHHHHHHTCCBCCTTTTTC--TTCTTCCEEEEECTTCCEEEEE
T ss_pred HHHHHHHHHHHcCCccccCCCccc--cCCCceEEEEEECCCCCEEEEE
Confidence 455566666677776644211111 1122234678899999887654
No 339
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=28.66 E-value=1.3e+02 Score=20.11 Aligned_cols=19 Identities=26% Similarity=0.308 Sum_probs=11.9
Q ss_pred HHHHHHHCCCcEEEccCCc
Q 033342 30 LVKEAASAGAKLLCFPENF 48 (121)
Q Consensus 30 ~~~~a~~~~~dlvv~PE~~ 48 (121)
++..|...|+|.|++.=..
T Consensus 127 qv~~A~~~GAD~VlLi~a~ 145 (272)
T 3qja_A 127 QIHEARAHGADMLLLIVAA 145 (272)
T ss_dssp HHHHHHHTTCSEEEEEGGG
T ss_pred HHHHHHHcCCCEEEEeccc
Confidence 3556666778877774333
No 340
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=28.63 E-value=62 Score=21.85 Aligned_cols=41 Identities=12% Similarity=0.122 Sum_probs=21.8
Q ss_pred CcccEEEEEEeccccCHHHHHHHHHHHHHHHHHCCCcEEEc
Q 033342 4 AHSVRVAVAQMTSINDLAANFATCSRLVKEAASAGAKLLCF 44 (121)
Q Consensus 4 ~~~~~ia~vQ~~~~~~~~~n~~~~~~~~~~a~~~~~dlvv~ 44 (121)
..+|||.++...........-..+..+++...+.|.++.++
T Consensus 18 ~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~ 58 (406)
T 2gek_A 18 GSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVL 58 (406)
T ss_dssp ---CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEE
Confidence 35799999986543221222344455555555667776554
No 341
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=28.59 E-value=89 Score=18.00 Aligned_cols=34 Identities=9% Similarity=0.077 Sum_probs=24.1
Q ss_pred HCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEE
Q 033342 36 SAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLS 85 (121)
Q Consensus 36 ~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii 85 (121)
...+.+|++.+-+. +..+...+..+|++++++++
T Consensus 34 ~gkakLViiA~D~~----------------~~~~~~~l~~lc~~~~VP~~ 67 (121)
T 2lbw_A 34 KGEKGLVVIAGDIW----------------PADVISHIPVLCEDHSVPYI 67 (121)
T ss_dssp HSCCCEEEECTTCS----------------CTTHHHHHHHHHHHTCCCEE
T ss_pred cCCceEEEEeCCCC----------------HHHHHHHHHHHHHhcCCcEE
Confidence 35677777776553 12357788899999999874
No 342
>2zod_A Selenide, water dikinase; FULL-length selenophosphate synthetase, transferase, ATP- binding, magnesium, nucleotide-binding, selenium; 1.98A {Aquifex aeolicus} SCOP: d.79.4.1 d.139.1.1 PDB: 2yye_A 2zau_A
Probab=28.51 E-value=1.3e+02 Score=20.58 Aligned_cols=24 Identities=21% Similarity=0.200 Sum_probs=19.8
Q ss_pred hHHHHHHHHHHHcCcEEEecccee
Q 033342 68 PIMQGYCSLARESSMWLSLGGFQE 91 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~G~~~~ 91 (121)
++.+-+.+.++++++.++.|-...
T Consensus 121 ~~~~Gi~~~~~~~gv~lvGGdt~~ 144 (345)
T 2zod_A 121 EVIRGALDKLREAKTVLLGGHTID 144 (345)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred HHHHHHHHHHHhccCcccCCceEE
Confidence 567788899999999999996554
No 343
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=28.51 E-value=51 Score=20.99 Aligned_cols=19 Identities=16% Similarity=0.221 Sum_probs=15.0
Q ss_pred ceEEEEEEECCCCCEEeee
Q 033342 98 RLCNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 98 ~~~Ns~~~i~~~G~i~~~y 116 (121)
...-+.++|+++|+++..+
T Consensus 144 ~~~P~~~lID~~G~I~~~~ 162 (221)
T 2c0d_A 144 FALRGLFIIDKNGCVRHQT 162 (221)
T ss_dssp EECEEEEEECTTSBEEEEE
T ss_pred CccceEEEECCCCeEEEEE
Confidence 3457889999999997664
No 344
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=28.50 E-value=1.1e+02 Score=20.89 Aligned_cols=53 Identities=8% Similarity=0.080 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHCCCc-EEEccC-CccCCCCCCchhhhcccCCCChHHHHHHHHHH------HcCcEEEe
Q 033342 24 FATCSRLVKEAASAGAK-LLCFPE-NFSYVGDKDADNIKIAEPLDGPIMQGYCSLAR------ESSMWLSL 86 (121)
Q Consensus 24 ~~~~~~~~~~a~~~~~d-lvv~PE-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~------~~~~~ii~ 86 (121)
.+.+++.+......+.. ++++.- ...++|.. .+.+.+..+.++|+ ++++.++.
T Consensus 163 ~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~----------~~~~~l~~l~~~~~~~~~~~~~~~~li~ 223 (413)
T 3t18_A 163 IDVYKEAIDEGIRDSDRIASLINSPGNNPTGYS----------LSDEEWDEVITFLKEKAEDKDKKITLIV 223 (413)
T ss_dssp HHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCC----------CCHHHHHHHHHHHHHHTTSTTCEEEEEE
T ss_pred HHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCC----------CCHHHHHHHHHHHHHHhhccCCcEEEEE
Confidence 34444444433233556 555533 23445543 23345677788887 78887765
No 345
>1to6_A Glycerate kinase; glycerate metabolism, structural genomics T831, PSI, protein structure initiative; 2.50A {Neisseria meningitidis serogroup A} SCOP: c.141.1.1
Probab=28.41 E-value=25 Score=24.93 Aligned_cols=43 Identities=14% Similarity=0.077 Sum_probs=29.7
Q ss_pred HCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEE--Eeccce
Q 033342 36 SAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWL--SLGGFQ 90 (121)
Q Consensus 36 ~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i--i~G~~~ 90 (121)
-+++|||+.-|..+ -.++..+.....+.+.|++ ++++ +.|+..
T Consensus 276 l~~ADLVITGEG~~-----------D~QT~~GK~p~gVa~~A~~-~~PviaiaG~~~ 320 (371)
T 1to6_A 276 VSDVDLVIVGEGRL-----------DRQSLAGKAPIGVAKRTPV-GVPVVAICGSLV 320 (371)
T ss_dssp TTTCSEEEECCSEE-----------CSTTTTTCHHHHHHTTSCT-TCCEEEEESEEC
T ss_pred hcCCCEEEECCCCC-----------CCCCCCCcHHHHHHHHHhc-CCCEEEEeCCCC
Confidence 35899999999887 1223456666777888877 6544 667653
No 346
>3j21_J 50S ribosomal protein L14P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=28.35 E-value=20 Score=21.73 Aligned_cols=15 Identities=33% Similarity=0.452 Sum_probs=13.0
Q ss_pred EEEEEECCCCCEEee
Q 033342 101 NTHVLLDDAGNIRST 115 (121)
Q Consensus 101 Ns~~~i~~~G~i~~~ 115 (121)
|++++++++|+..++
T Consensus 102 NA~VLin~~g~p~GT 116 (141)
T 3j21_J 102 NAAVIVTPEGVPRGT 116 (141)
T ss_dssp CEEEEBCTTSCBCSS
T ss_pred cEEEEECCCCCEeee
Confidence 999999999987664
No 347
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=28.33 E-value=1.2e+02 Score=20.32 Aligned_cols=25 Identities=4% Similarity=0.111 Sum_probs=21.4
Q ss_pred cCHHHHHHHHHHHHHHHHHCCCcEE
Q 033342 18 NDLAANFATCSRLVKEAASAGAKLL 42 (121)
Q Consensus 18 ~~~~~n~~~~~~~~~~a~~~~~dlv 42 (121)
.+.++|++.+.+.++.|.+.|.++-
T Consensus 117 ~s~ee~l~~~~~~v~~a~~~G~~V~ 141 (302)
T 2ftp_A 117 CSIKDSLERFVPVLEAARQHQVRVR 141 (302)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 5688999999999999999888753
No 348
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=28.31 E-value=87 Score=21.80 Aligned_cols=24 Identities=21% Similarity=0.202 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEc
Q 033342 21 AANFATCSRLVKEAASAGAKLLCF 44 (121)
Q Consensus 21 ~~n~~~~~~~~~~a~~~~~dlvv~ 44 (121)
+..++.+.+.++.|..-|++.|++
T Consensus 112 ~~~i~~~~~~i~~A~~LGa~~vvv 135 (394)
T 1xla_A 112 RFALAKVLHNIDLAAEMGAETFVM 135 (394)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEE
Confidence 567888999999999999998765
No 349
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=28.28 E-value=22 Score=24.50 Aligned_cols=30 Identities=17% Similarity=0.080 Sum_probs=19.6
Q ss_pred CHHHHHHHHHHHHHHHHHCCCcEEEccCCc
Q 033342 19 DLAANFATCSRLVKEAASAGAKLLCFPENF 48 (121)
Q Consensus 19 ~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~ 48 (121)
+.+++++.+.+.++.|.+.+.++.+.+|..
T Consensus 116 s~~e~l~~~~~~v~~a~~~g~~v~f~~~d~ 145 (325)
T 3eeg_A 116 TRENILEMAVAAVKQAKKVVHEVEFFCEDA 145 (325)
T ss_dssp CCTTGGGTTHHHHHHHHTTSSEEEEEEETG
T ss_pred CHHHHHHHHHHHHHHHHHCCCEEEEEcccc
Confidence 455566677777777777777666666644
No 350
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=28.24 E-value=80 Score=21.91 Aligned_cols=25 Identities=32% Similarity=0.299 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHCCCcEE-EccCC
Q 033342 23 NFATCSRLVKEAASAGAKLL-CFPEN 47 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlv-v~PE~ 47 (121)
+.+...++.+.|.+.|+|-+ +.|=+
T Consensus 103 st~eai~la~~A~~~Gadavlv~~P~ 128 (344)
T 2hmc_A 103 NTASAVAHAVHAQKVGAKGLMVIPRV 128 (344)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred CHHHHHHHHHHHHhcCCCEEEECCCc
Confidence 45667777888878899843 44433
No 351
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=28.08 E-value=1.2e+02 Score=20.46 Aligned_cols=34 Identities=12% Similarity=0.175 Sum_probs=23.2
Q ss_pred CCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 38 GAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 38 ~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
++.+|++++... +. ..+ ++.+.++|+++++.++.
T Consensus 163 ~~~~v~~~~p~~--~~-----------~~~--l~~i~~l~~~~~~~li~ 196 (407)
T 2dkj_A 163 RPKVIVAGASAY--PR-----------FWD--FKAFREIADEVGAYLVV 196 (407)
T ss_dssp CCSEEEECCSSC--CS-----------CCC--HHHHHHHHHHHTCEEEE
T ss_pred CCeEEEEecccc--CC-----------CCC--HHHHHHHHHHcCCEEEE
Confidence 678888865443 21 011 67889999999988864
No 352
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=27.99 E-value=46 Score=20.35 Aligned_cols=18 Identities=11% Similarity=0.115 Sum_probs=14.6
Q ss_pred eEEEEEEECCCCCEEeee
Q 033342 99 LCNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 99 ~~Ns~~~i~~~G~i~~~y 116 (121)
..-+.++++++|+++..+
T Consensus 131 ~~P~~~lid~~G~i~~~~ 148 (195)
T 2bmx_A 131 ADRVTFIVDPNNEIQFVS 148 (195)
T ss_dssp BCEEEEEECTTSBEEEEE
T ss_pred ccceEEEEcCCCeEEEEE
Confidence 456789999999998765
No 353
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=27.87 E-value=39 Score=23.26 Aligned_cols=19 Identities=16% Similarity=0.268 Sum_probs=16.1
Q ss_pred hHHHHHHHHHHHcCcEEEe
Q 033342 68 PIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~ 86 (121)
+.++.+.++|+++++.++.
T Consensus 194 ~~l~~i~~~~~~~~~~li~ 212 (409)
T 2gb3_A 194 DEMRYLVEIAERHGLFLIV 212 (409)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHcCCEEEE
Confidence 4678899999999998865
No 354
>3u5e_V L17A, YL32, 60S ribosomal protein L23-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_M 1s1i_R 3izs_M* 3j16_I 3o5h_U 3o58_U 3u5i_V 4b6a_V 2x7n_C 3jyw_R 2zkr_k 3iz5_M 3izr_M 4a17_J 4a1a_J 4a1c_J 4a1e_J
Probab=27.79 E-value=20 Score=21.62 Aligned_cols=15 Identities=20% Similarity=0.527 Sum_probs=13.0
Q ss_pred EEEEEECCCCCEEee
Q 033342 101 NTHVLLDDAGNIRST 115 (121)
Q Consensus 101 Ns~~~i~~~G~i~~~ 115 (121)
|++++++++|+..++
T Consensus 98 NA~Vlin~~g~p~GT 112 (137)
T 3u5e_V 98 NAGVIANPKGEMKGS 112 (137)
T ss_dssp CEEEEBCTTCCBSSS
T ss_pred ceEEEECCCCCEeee
Confidence 999999999987664
No 355
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=27.77 E-value=39 Score=21.85 Aligned_cols=65 Identities=15% Similarity=0.123 Sum_probs=31.1
Q ss_pred HCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEe
Q 033342 36 SAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRS 114 (121)
Q Consensus 36 ~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~ 114 (121)
..+++++++=|=+. +-+.. ....+.+.+.++++ .+..+++-+.... .-.++.+..+++. +|+++.
T Consensus 155 ~~~p~lllLDEPts--~LD~~--------~~~~l~~~l~~~~~-~g~tvi~vtHd~~--~~~~~~d~v~~l~-~G~i~~ 219 (240)
T 1ji0_A 155 MSRPKLLMMDEPSL--GLAPI--------LVSEVFEVIQKINQ-EGTTILLVEQNAL--GALKVAHYGYVLE-TGQIVL 219 (240)
T ss_dssp TTCCSEEEEECTTT--TCCHH--------HHHHHHHHHHHHHH-TTCCEEEEESCHH--HHHHHCSEEEEEE-TTEEEE
T ss_pred HcCCCEEEEcCCcc--cCCHH--------HHHHHHHHHHHHHH-CCCEEEEEecCHH--HHHHhCCEEEEEE-CCEEEE
Confidence 45677777777553 21110 11234455556554 3554544432210 1113445666775 687753
No 356
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=27.55 E-value=1.4e+02 Score=19.83 Aligned_cols=25 Identities=16% Similarity=0.004 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEcc
Q 033342 21 AANFATCSRLVKEAASAGAKLLCFP 45 (121)
Q Consensus 21 ~~n~~~~~~~~~~a~~~~~dlvv~P 45 (121)
+..++.+.+.++.|..-|++.|+++
T Consensus 107 ~~~~~~~~~~i~~A~~lGa~~v~~~ 131 (340)
T 2zds_A 107 QRAAAEIKDTARAAARLGVDTVIGF 131 (340)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 4567788888888888899988764
No 357
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=27.47 E-value=1e+02 Score=21.46 Aligned_cols=17 Identities=24% Similarity=0.348 Sum_probs=14.5
Q ss_pred HHHHHHHHHHcCcEEEe
Q 033342 70 MQGYCSLARESSMWLSL 86 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~ 86 (121)
++.+.++|+++++.+++
T Consensus 163 l~~i~~~a~~~g~~liv 179 (421)
T 2ctz_A 163 LEALAQAAREKGVALIV 179 (421)
T ss_dssp HHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHcCCEEEE
Confidence 67899999999988865
No 358
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=27.47 E-value=1.3e+02 Score=21.34 Aligned_cols=63 Identities=13% Similarity=0.028 Sum_probs=34.5
Q ss_pred HHHHHHHHHHH-HCCCcEEEccCCccCCCCC-CchhhhcccCCCChHHHHHHHHHHHcCcEEEecc
Q 033342 25 ATCSRLVKEAA-SAGAKLLCFPENFSYVGDK-DADNIKIAEPLDGPIMQGYCSLARESSMWLSLGG 88 (121)
Q Consensus 25 ~~~~~~~~~a~-~~~~dlvv~PE~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~ 88 (121)
..+...+++.. ..++++||.=......+.. .... .-....-..+...|..+|+++++++++-+
T Consensus 296 ~~l~~~~~~l~~~~~~~lIvID~l~~~~~~~~~~~~-~~r~~~i~~i~~~Lk~lAke~~v~vi~ls 360 (444)
T 2q6t_A 296 MEVRARARRLVSQNQVGLIIIDYLQLMSGPGSGKSG-ENRQQEIAAISRGLKALARELGIPIIALS 360 (444)
T ss_dssp HHHHHHHHHHHHHSCCCEEEEECGGGCBCC--------CHHHHHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEcChhhcCCCcCCCCC-CCHHHHHHHHHHHHHHHHHHhCCeEEEEe
Confidence 33444444332 4689999998887622210 0000 00000113567788999999998887653
No 359
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=27.43 E-value=40 Score=23.29 Aligned_cols=13 Identities=31% Similarity=0.549 Sum_probs=10.9
Q ss_pred HCCCcEEEccCCc
Q 033342 36 SAGAKLLCFPENF 48 (121)
Q Consensus 36 ~~~~dlvv~PE~~ 48 (121)
+.+||+++.||.-
T Consensus 183 A~ga~~iliPE~~ 195 (319)
T 1zxx_A 183 ACGADAIVIPERP 195 (319)
T ss_dssp HTTCSEEECTTSC
T ss_pred hcCCCEEEeCCCC
Confidence 4589999999974
No 360
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=27.43 E-value=54 Score=18.04 Aligned_cols=17 Identities=24% Similarity=0.374 Sum_probs=12.9
Q ss_pred EEEEEEECCCCCEEeeee
Q 033342 100 CNTHVLLDDAGNIRSTYR 117 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y~ 117 (121)
+-+.++++++|+++ .|.
T Consensus 102 ~P~~~~id~~g~i~-~~~ 118 (136)
T 1zzo_A 102 QPAYAFVDPHGNVD-VVR 118 (136)
T ss_dssp SSEEEEECTTCCEE-EEE
T ss_pred CceEEEECCCCCEE-EEe
Confidence 45788999999986 543
No 361
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=27.35 E-value=1.5e+02 Score=20.85 Aligned_cols=33 Identities=9% Similarity=0.043 Sum_probs=27.8
Q ss_pred ccCHHHHHHHHHHHHHHHHHCC--CcEEEccCCcc
Q 033342 17 INDLAANFATCSRLVKEAASAG--AKLLCFPENFS 49 (121)
Q Consensus 17 ~~~~~~n~~~~~~~~~~a~~~~--~dlvv~PE~~~ 49 (121)
..+.+++++.+.+.++.|++.| .++.+-+|.+.
T Consensus 106 ~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~ 140 (382)
T 2ztj_A 106 GRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTF 140 (382)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTT
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCC
Confidence 3567888999999999999889 88888888664
No 362
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=27.25 E-value=1.5e+02 Score=20.20 Aligned_cols=36 Identities=3% Similarity=-0.109 Sum_probs=20.1
Q ss_pred EEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 41 LLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 41 lvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
++++|-...++|... +.+.++.+.++|+++++.++.
T Consensus 179 ~~~~~~p~nPtG~~~----------~~~~l~~l~~~~~~~~~~li~ 214 (412)
T 1yaa_A 179 FVLHSCAHNPTGLDP----------TSEQWVQIVDAIASKNHIALF 214 (412)
T ss_dssp EEEECSSCTTTCCCC----------CHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEeCCCCCCCCCCC----------CHHHHHHHHHHHHHCCCEEEE
Confidence 444476665455431 223456677777777766653
No 363
>1wjo_A T-plastin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: a.40.1.1 PDB: 2d85_A
Probab=27.23 E-value=38 Score=19.95 Aligned_cols=31 Identities=19% Similarity=0.300 Sum_probs=22.4
Q ss_pred CHHHHHHHHHHHHHHHHHCCCcEEEccCCcc
Q 033342 19 DLAANFATCSRLVKEAASAGAKLLCFPENFS 49 (121)
Q Consensus 19 ~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~ 49 (121)
+.++..++....+..|.+-|+.+.+.||--.
T Consensus 66 ~~~d~~~Na~~ais~ArklG~~~~l~pEDIv 96 (124)
T 1wjo_A 66 TEDDKHNNAKYAVSMARRIGARVYALPEDLV 96 (124)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCSCCCCHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCCcccCHHHHh
Confidence 3455666666666666678999999999664
No 364
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=27.23 E-value=40 Score=23.27 Aligned_cols=13 Identities=23% Similarity=0.485 Sum_probs=11.0
Q ss_pred HCCCcEEEccCCc
Q 033342 36 SAGAKLLCFPENF 48 (121)
Q Consensus 36 ~~~~dlvv~PE~~ 48 (121)
+.+||+++.||.-
T Consensus 184 A~ga~~iliPE~~ 196 (320)
T 1pfk_A 184 AGGCEFVVVPEVE 196 (320)
T ss_dssp HTTCSEEECTTSC
T ss_pred hcCCCEEEeCCCC
Confidence 4589999999974
No 365
>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}
Probab=27.14 E-value=94 Score=17.81 Aligned_cols=43 Identities=9% Similarity=-0.056 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEeeee
Q 033342 69 IMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYR 117 (121)
Q Consensus 69 ~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~~y~ 117 (121)
-++.+.+.+++.++.++.+ .... ..| ..+++.+|+|..+..+.
T Consensus 99 dv~~~~~~l~~~G~~~~~~-~~~~--~~g---~~~~~~DPdG~~iel~~ 141 (144)
T 2kjz_A 99 QVDETFAGWKASGVAMLQQ-PAKM--EFG---YTFTAADPDSHRLRVYA 141 (144)
T ss_dssp HHHHHHHHHHHTTCCCCSC-CEEE--TTE---EEEEECCTTCCEEEEEE
T ss_pred HHHHHHHHHHHCCCeEecC-ceec--CCc---eEEEEECCCCCEEEEEe
Confidence 4556666666777766443 2221 222 45688999998876553
No 366
>2gx8_A NIF3-related protein; structural genomics, unknown function, protein structure initiative, midwest center for structural genomics, MCSG; HET: EPE; 2.20A {Bacillus cereus} SCOP: c.135.1.1
Probab=27.07 E-value=1.7e+02 Score=20.82 Aligned_cols=53 Identities=13% Similarity=0.093 Sum_probs=29.8
Q ss_pred HHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEec
Q 033342 27 CSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLG 87 (121)
Q Consensus 27 ~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G 87 (121)
..+.+++|.+.+||+||.=.-.++.+... . ........+...+.+++|.+..-
T Consensus 74 t~~Vv~eAi~~gadlIItHHPlif~~lk~-----i---~~~~~~~r~i~~li~~~Iavya~ 126 (397)
T 2gx8_A 74 TEEVVDEAIQLGANVIIAHHPLIFNPLKA-----I---HTDKAYGKIIEKCIKNDIAIYAA 126 (397)
T ss_dssp CHHHHHHHHHHTCCEEEESSCSCCSCCSC-----C---CTTSHHHHHHHHHHHTTCEEEEC
T ss_pred CHHHHHHHHHCCCCEEEECCccccCCccc-----c---CcCcHHHHHHHHHHHCCCeEEEe
Confidence 35677788888999999876655222110 0 11223444444455666666544
No 367
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=27.06 E-value=1.5e+02 Score=20.09 Aligned_cols=37 Identities=27% Similarity=0.445 Sum_probs=23.6
Q ss_pred CCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 37 AGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 37 ~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
.++.+|+++=...++|... + ++.+.++|+++++.++.
T Consensus 177 ~~~~~v~~~~~~nptG~~~----------~---l~~i~~l~~~~~~~li~ 213 (401)
T 2bwn_A 177 AAPKLIAFESVYSMDGDFG----------P---IKEICDIAEEFGALTYI 213 (401)
T ss_dssp TSCEEEEEESBCTTTCCBC----------C---HHHHHHHHHHHTCEEEE
T ss_pred CCceEEEEecCcCCCCCcC----------C---HHHHHHHHHHcCCEEEE
Confidence 3567777655444344321 1 57889999999988764
No 368
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=26.92 E-value=1.1e+02 Score=20.52 Aligned_cols=36 Identities=25% Similarity=0.323 Sum_probs=23.3
Q ss_pred CCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 38 GAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 38 ~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
++.+|+++-...++|.. .+ ++.+.++|++++++++.
T Consensus 175 ~~~~v~~~~~~nptG~~----------~~---l~~i~~l~~~~~~~li~ 210 (399)
T 3tqx_A 175 RFKLIATDGVFSMDGII----------AD---LKSICDLADKYNALVMV 210 (399)
T ss_dssp SSEEEEEESEETTTTEE----------CC---HHHHHHHHHHTTCEEEE
T ss_pred CceEEEEeCCCCCCCCc----------CC---HHHHHHHHHHcCCEEEE
Confidence 56677766544433321 11 67899999999988864
No 369
>3k1t_A Glutamate--cysteine ligase GSHA; putative gamma-glutamylcysteine synthetase; HET: MSE; 1.90A {Methylobacillus flagellatus KT}
Probab=26.91 E-value=1.8e+02 Score=21.01 Aligned_cols=74 Identities=14% Similarity=0.190 Sum_probs=48.7
Q ss_pred cccEEEEEEecc-c--------cCHHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHH
Q 033342 5 HSVRVAVAQMTS-I--------NDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCS 75 (121)
Q Consensus 5 ~~~~ia~vQ~~~-~--------~~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 75 (121)
+-.|+|-|-.|. + ....--.+...+.+++.....-.+++.||.-. -.. ..-+.+..|.+
T Consensus 53 aGfKlAPVDtNLFPaGFNNL~~~~~plavqa~~~aiek~cp~a~~iLlIPEnHT-RN~-----------fYl~Nv~~L~~ 120 (432)
T 3k1t_A 53 AGFKLAPVDTNLFPGGFNNLNPDFLPLCIQAAMVAVEKICPDARRLLLIPENHT-RNT-----------FYLRNVHALTH 120 (432)
T ss_dssp CSSCEEEEEEESSCCCGGGSCGGGHHHHHHHHHHHHHHHSTTCSEEEEEECSCS-SCH-----------HHHHHHHHHHH
T ss_pred cCCccccccccCCCcccccCCHHHHHHHHHHHHHHHHHhCcccceEEEecCCCc-ccH-----------HHHHHHHHHHH
Confidence 347889998885 2 23444455566666665555568999999876 110 11134677888
Q ss_pred HHHHcCcEEEeccce
Q 033342 76 LARESSMWLSLGGFQ 90 (121)
Q Consensus 76 ~a~~~~~~ii~G~~~ 90 (121)
+.+..|..+-+|++.
T Consensus 121 I~~~AG~~VriGsl~ 135 (432)
T 3k1t_A 121 ILRQAGLEVRIGSIA 135 (432)
T ss_dssp HHHHTTCEEEEEECC
T ss_pred HHHHcCceEEEcCCC
Confidence 888889989889874
No 370
>1x52_A Pelota homolog, CGI-17; ERF1_3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.79.3.2
Probab=26.91 E-value=85 Score=18.28 Aligned_cols=26 Identities=15% Similarity=0.152 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHCCCcEEEccCCcc
Q 033342 24 FATCSRLVKEAASAGAKLLCFPENFS 49 (121)
Q Consensus 24 ~~~~~~~~~~a~~~~~dlvv~PE~~~ 49 (121)
...+.++++.+.+.|+++.++|....
T Consensus 73 ~~~~~el~e~~~~~G~~V~ivs~~~~ 98 (124)
T 1x52_A 73 RSRYVRLVDSVKENAGTVRIFSSLHV 98 (124)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECSSSH
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCc
Confidence 34556688888899999999998764
No 371
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=26.87 E-value=1e+02 Score=18.04 Aligned_cols=34 Identities=15% Similarity=0.268 Sum_probs=25.7
Q ss_pred HCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEE
Q 033342 36 SAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLS 85 (121)
Q Consensus 36 ~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii 85 (121)
+..+.+|++-+-+. +..+...+..+|.+++++++
T Consensus 38 ~gka~LViiA~D~~----------------p~~~~~~i~~lc~~~~Ip~~ 71 (126)
T 2xzm_U 38 AKQALFVCVAEDCD----------------QGNYVKLVKALCAKNEIKYV 71 (126)
T ss_dssp HTCCSEEEEESSCC----------------STTHHHHHHHHHHHTTCCEE
T ss_pred cCCceEEEEeCCCC----------------hHHHHHHHHHHHHHhCCCEE
Confidence 46788888877653 23456788999999999885
No 372
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=26.86 E-value=67 Score=19.61 Aligned_cols=25 Identities=4% Similarity=0.110 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHCCCcEEEccCCcc
Q 033342 25 ATCSRLVKEAASAGAKLLCFPENFS 49 (121)
Q Consensus 25 ~~~~~~~~~a~~~~~dlvv~PE~~~ 49 (121)
+.+.+.++++.+.++|+|+.-=...
T Consensus 53 ~~i~~al~~a~~~~~DlVittGG~s 77 (164)
T 3pzy_A 53 SPVGEALRKAIDDDVDVILTSGGTG 77 (164)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESCCS
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCC
Confidence 5667777777666899999765544
No 373
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=26.73 E-value=1.5e+02 Score=20.07 Aligned_cols=17 Identities=29% Similarity=0.419 Sum_probs=14.2
Q ss_pred HHHHHHHHHHcCcEEEe
Q 033342 70 MQGYCSLARESSMWLSL 86 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~ 86 (121)
++.+.++|+++++.+++
T Consensus 156 l~~i~~l~~~~~~~li~ 172 (386)
T 1cs1_A 156 IAKICHLAREVGAVSVV 172 (386)
T ss_dssp HHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCEEEE
Confidence 67889999999988764
No 374
>3qyy_A Response regulator; C-DI-GMP, DGC, ggdef, competitive inhibition, xanthomonas Ca signaling protein-inhibitor complex; HET: C2E; 1.90A {Xanthomonas campestris PV}
Probab=26.73 E-value=1e+02 Score=17.98 Aligned_cols=39 Identities=15% Similarity=0.066 Sum_probs=28.3
Q ss_pred ccEEEEEEeccccCHHHHHHHHHHHHHHHHHCCCcEEEc
Q 033342 6 SVRVAVAQMTSINDLAANFATCSRLVKEAASAGAKLLCF 44 (121)
Q Consensus 6 ~~~ia~vQ~~~~~~~~~n~~~~~~~~~~a~~~~~dlvv~ 44 (121)
++.+|++......+..+-+++....+..|+..|-+-+++
T Consensus 127 ~~s~G~~~~~~~~~~~~ll~~A~~Al~~Ak~~g~~~~~~ 165 (167)
T 3qyy_A 127 HVSAGSAVCEVGIDATELYRRADAAMYRAKFSGGRRLVR 165 (167)
T ss_dssp CEEEEEEECCTTCCHHHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred EEEEEEEEecCCCCHHHHHHHHHHHHHHHHHHCCCceec
Confidence 356677766555677888888888888888877666654
No 375
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=26.48 E-value=67 Score=20.54 Aligned_cols=18 Identities=28% Similarity=0.416 Sum_probs=12.6
Q ss_pred HHHHHHHHCCCcEEEccC
Q 033342 29 RLVKEAASAGAKLLCFPE 46 (121)
Q Consensus 29 ~~~~~a~~~~~dlvv~PE 46 (121)
+.++.|.+.|+|.|+.|.
T Consensus 79 d~~~~A~~aGAd~v~~p~ 96 (214)
T 1wbh_A 79 QQLAEVTEAGAQFAISPG 96 (214)
T ss_dssp HHHHHHHHHTCSCEEESS
T ss_pred HHHHHHHHcCCCEEEcCC
Confidence 455556677888888774
No 376
>3hn9_A Lamin-B1; structural genomics, structural genomics consortium, SGC, acetylation, chromosomal rearrangement, coiled coil, intermediate filament; 2.00A {Homo sapiens} PDB: 3umn_A 2kpw_A
Probab=26.33 E-value=64 Score=18.85 Aligned_cols=16 Identities=13% Similarity=0.158 Sum_probs=13.4
Q ss_pred EEEEECCCCCEEeeee
Q 033342 102 THVLLDDAGNIRSTYR 117 (121)
Q Consensus 102 s~~~i~~~G~i~~~y~ 117 (121)
...+++++|+.++.|.
T Consensus 101 ~t~L~n~~Gee~A~~~ 116 (123)
T 3hn9_A 101 KVILKNSQGEEVAQRS 116 (123)
T ss_dssp EEEEECTTSCEEEEEE
T ss_pred EEEEECCCCCEEEEEE
Confidence 5689999999988774
No 377
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=26.32 E-value=58 Score=21.83 Aligned_cols=17 Identities=6% Similarity=0.059 Sum_probs=14.4
Q ss_pred HHHHHHHHHHcCcEEEe
Q 033342 70 MQGYCSLARESSMWLSL 86 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~ 86 (121)
++.+.++|+++++.++.
T Consensus 146 l~~i~~l~~~~~~~li~ 162 (384)
T 3zrp_A 146 VKDVINKIRKYVELIVV 162 (384)
T ss_dssp HHHHHHHHGGGEEEEEE
T ss_pred HHHHHHHHHhcCCEEEE
Confidence 67899999999988865
No 378
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=26.26 E-value=52 Score=20.30 Aligned_cols=18 Identities=17% Similarity=0.241 Sum_probs=14.4
Q ss_pred eEEEEEEECCCCCEEeee
Q 033342 99 LCNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 99 ~~Ns~~~i~~~G~i~~~y 116 (121)
..-+.++|+++|+++..+
T Consensus 126 ~~P~~~lid~~G~i~~~~ 143 (202)
T 1uul_A 126 AYRGLFIIDPKQNLRQIT 143 (202)
T ss_dssp ECEEEEEECTTSBEEEEE
T ss_pred eeeEEEEECCCCEEEEEE
Confidence 566789999999987664
No 379
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=26.15 E-value=58 Score=19.05 Aligned_cols=17 Identities=29% Similarity=0.370 Sum_probs=13.2
Q ss_pred EEEEEEECCCCCEEeee
Q 033342 100 CNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y 116 (121)
+-+.++++++|+++..+
T Consensus 126 ~P~~~lid~~G~i~~~~ 142 (168)
T 2b1k_A 126 APETFLIDGNGIIRYRH 142 (168)
T ss_dssp SSEEEEECTTSBEEEEE
T ss_pred cCEEEEECCCCeEEEEE
Confidence 34689999999987654
No 380
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=26.14 E-value=95 Score=21.10 Aligned_cols=22 Identities=27% Similarity=0.265 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHCCCcEEEc
Q 033342 23 NFATCSRLVKEAASAGAKLLCF 44 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlvv~ 44 (121)
+.+...++.+.|.+.|+|-++.
T Consensus 91 ~t~~ai~la~~A~~~Gadavlv 112 (316)
T 3e96_A 91 ATSTAIELGNAAKAAGADAVMI 112 (316)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEE
Confidence 4566777888888889996553
No 381
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=26.14 E-value=63 Score=22.38 Aligned_cols=39 Identities=8% Similarity=0.053 Sum_probs=22.5
Q ss_pred CCcEEE-ccCCccCCCCCCchhhhcccCCCChHHHHHHHHHH-HcCcEEEe
Q 033342 38 GAKLLC-FPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLAR-ESSMWLSL 86 (121)
Q Consensus 38 ~~dlvv-~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~-~~~~~ii~ 86 (121)
++++|+ .|=...++|.. .+.+.++.+.++|+ ++++.++.
T Consensus 178 ~~~~v~~~~~~~NPtG~~----------~~~~~l~~l~~~~~~~~~~~li~ 218 (422)
T 3d6k_A 178 QVKGMWTVPVFGNPTGVT----------FSEQTCRELAEMSTAAPDFRIVW 218 (422)
T ss_dssp TEEEEEECCSSCTTTCCC----------CCHHHHHHHHHCCCSSTTCEEEE
T ss_pred CCeEEEEcCCCCCCCCCC----------CCHHHHHHHHHHHhhccCCEEEE
Confidence 567766 66555444542 23344566677776 77776653
No 382
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=26.10 E-value=1.1e+02 Score=20.97 Aligned_cols=18 Identities=22% Similarity=0.322 Sum_probs=15.0
Q ss_pred HHHHHHHHHHcCcEEEec
Q 033342 70 MQGYCSLARESSMWLSLG 87 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~G 87 (121)
++.+.++|+++++.+++=
T Consensus 170 l~~i~~la~~~g~~li~D 187 (392)
T 3qhx_A 170 IAGIAQLGADSSAKVLVD 187 (392)
T ss_dssp HHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHcCCEEEEE
Confidence 778999999999888653
No 383
>3ojc_A Putative aspartate/glutamate racemase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 1.75A {Yersinia pestis}
Probab=26.07 E-value=84 Score=20.24 Aligned_cols=32 Identities=19% Similarity=0.119 Sum_probs=23.0
Q ss_pred cCHHHHHHHHHHHHHHHHHCCCcEEEccCCcc
Q 033342 18 NDLAANFATCSRLVKEAASAGAKLLCFPENFS 49 (121)
Q Consensus 18 ~~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~ 49 (121)
++.++-.+.+.+.++...+.|+|+||.|=.+.
T Consensus 56 ~~~~~~~~~l~~~~~~L~~~g~~~iviaCNTa 87 (231)
T 3ojc_A 56 GDWQTAAQLLSNAAISLKHAGAEVIVVCTNTM 87 (231)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCCEEEECSSGG
T ss_pred CChhHHHHHHHHHHHHHHhcCCCEEEEeCCch
Confidence 34455566677777777778999999996554
No 384
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=26.00 E-value=49 Score=19.99 Aligned_cols=36 Identities=8% Similarity=0.020 Sum_probs=17.6
Q ss_pred CCcccEEEEEEeccccCHHHHHHHHHHHHHHHHHCCCcEEEc
Q 033342 3 GAHSVRVAVAQMTSINDLAANFATCSRLVKEAASAGAKLLCF 44 (121)
Q Consensus 3 ~~~~~~ia~vQ~~~~~~~~~n~~~~~~~~~~a~~~~~dlvv~ 44 (121)
.|.+|||+++- ++.++ .+.+.+.++.+.. ++|.|++
T Consensus 3 ~m~~m~i~~is-D~H~~----~~~~~~~~~~~~~-~~d~i~~ 38 (176)
T 3ck2_A 3 AMAKQTIIVMS-DSHGD----SLIVEEVRDRYVG-KVDAVFH 38 (176)
T ss_dssp CCCCEEEEEEC-CCTTC----HHHHHHHHHHHTT-TSSEEEE
T ss_pred cccCcEEEEEe-cCCCC----HHHHHHHHHHhhc-CCCEEEE
Confidence 34567776553 22233 3334444444433 6777653
No 385
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=25.89 E-value=81 Score=21.51 Aligned_cols=19 Identities=21% Similarity=0.279 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHCCCcE
Q 033342 23 NFATCSRLVKEAASAGAKL 41 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dl 41 (121)
+.+...++.+.|.+.|+|-
T Consensus 91 ~t~~ai~la~~a~~~Gada 109 (318)
T 3qfe_A 91 STRQVLEHINDASVAGANY 109 (318)
T ss_dssp SHHHHHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHHHHHHcCCCE
Confidence 4566777778887889884
No 386
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=25.88 E-value=1.3e+02 Score=20.29 Aligned_cols=19 Identities=11% Similarity=-0.001 Sum_probs=15.8
Q ss_pred hHHHHHHHHHHHcCcEEEe
Q 033342 68 PIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~ 86 (121)
+.++.+.++|+++++.++.
T Consensus 181 ~~l~~l~~~~~~~~~~li~ 199 (391)
T 3h14_A 181 AAMGALIEAAQAQGASFIS 199 (391)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHcCCEEEE
Confidence 4588899999999998864
No 387
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=25.84 E-value=54 Score=18.14 Aligned_cols=18 Identities=11% Similarity=0.060 Sum_probs=13.3
Q ss_pred eEEEEEEECCCCCEEeeee
Q 033342 99 LCNTHVLLDDAGNIRSTYR 117 (121)
Q Consensus 99 ~~Ns~~~i~~~G~i~~~y~ 117 (121)
.+-+.++++++|+++ .+.
T Consensus 99 ~~P~~~lid~~G~i~-~~~ 116 (136)
T 1lu4_A 99 WQPAFVFYRADGTST-FVN 116 (136)
T ss_dssp SSSEEEEECTTSCEE-EEC
T ss_pred CCCEEEEECCCCcEE-EEE
Confidence 345788999999987 543
No 388
>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}
Probab=25.75 E-value=99 Score=17.62 Aligned_cols=42 Identities=7% Similarity=-0.001 Sum_probs=26.6
Q ss_pred hHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEee
Q 033342 68 PIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRST 115 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~~ 115 (121)
+-++.+.+.+.+.+..++.+ ... .+ .+-++++.+|||..+..
T Consensus 89 ~~vd~~~~~~~~~g~~~~~~-p~~---~~--~~~~~~f~DPDGn~iEi 130 (149)
T 4gym_A 89 DDVDRFADTALGAGGTVARD-PMD---YG--FMYGRSFHDLDGHLWEV 130 (149)
T ss_dssp HHHHHHHHHHHHTTCEECSC-CEE---CS--SEEEEEEECTTCCEEEE
T ss_pred HHHHHHHHHHHhcCceeecc-ccc---cC--CEEEEEEEcCCCCEEEE
Confidence 44566666677778877544 222 22 23468899999987654
No 389
>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*
Probab=25.67 E-value=95 Score=17.38 Aligned_cols=44 Identities=9% Similarity=-0.047 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEeeee
Q 033342 69 IMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTYR 117 (121)
Q Consensus 69 ~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~~y~ 117 (121)
-++.+.+.+++.|+.++.+ .... ..| .-.+++.+|+|..+..+.
T Consensus 84 dv~~~~~~l~~~G~~~~~~-~~~~--~~g--~~~~~~~DPdG~~iel~~ 127 (138)
T 2a4x_A 84 SVDKKYAELVDAGYEGHLK-PWNA--VWG--QRYAIVKDPDGNVVDLFA 127 (138)
T ss_dssp HHHHHHHHHHHTTCCEEEE-EEEE--TTT--EEEEEEECTTCCEEEEEE
T ss_pred HHHHHHHHHHHCCCceeeC-Cccc--CCC--cEEEEEECCCCCEEEEEe
Confidence 4555666667778777544 2221 223 346788999998876543
No 390
>2v5d_A O-GLCNACASE NAGJ; family 32 carbohydrate binding module, glycosidase, GH84, GH84C, CBM32, hydrolase, coiled coil; 3.30A {Clostridium perfringens}
Probab=25.63 E-value=2e+02 Score=22.28 Aligned_cols=26 Identities=12% Similarity=0.121 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHCCCcEE--EccCCcc
Q 033342 24 FATCSRLVKEAASAGAKLL--CFPENFS 49 (121)
Q Consensus 24 ~~~~~~~~~~a~~~~~dlv--v~PE~~~ 49 (121)
.+.+.++++.|...|+++| ++||..+
T Consensus 206 ~~~~~elv~ya~~rgI~vv~~i~P~~~~ 233 (737)
T 2v5d_A 206 MQRMQELINASAENKVDFVFGISPGIDI 233 (737)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCCGGGC
T ss_pred HHHHHHHHHHHHHCCCEEEEecCCCccc
Confidence 4578899999999999998 7899877
No 391
>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2
Probab=25.53 E-value=87 Score=16.88 Aligned_cols=42 Identities=14% Similarity=0.087 Sum_probs=24.7
Q ss_pred HHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEeee
Q 033342 70 MQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~~y 116 (121)
++.+.+.+++.|+.++.+ .... ..| ...+++.+|+|..+..+
T Consensus 74 ~~~~~~~l~~~G~~~~~~-~~~~--~~g--~~~~~~~DPdG~~iel~ 115 (118)
T 2i7r_A 74 VDQNYKRLNELGIKVLHG-PTVT--DWG--TESLLVQGPAGLVLDFY 115 (118)
T ss_dssp HHHHHHHHHHHTCCEEEE-EEEC--TTS--CEEEEEECGGGCEEEEE
T ss_pred HHHHHHHHHHCCCceecC-Cccc--cCc--cEEEEEECCCccEEEEE
Confidence 455555556667776554 2221 222 24568899999877654
No 392
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=25.51 E-value=86 Score=19.84 Aligned_cols=19 Identities=32% Similarity=0.363 Sum_probs=13.9
Q ss_pred HHHHHHHHCCCcEEEccCC
Q 033342 29 RLVKEAASAGAKLLCFPEN 47 (121)
Q Consensus 29 ~~~~~a~~~~~dlvv~PE~ 47 (121)
+.++.|.+.|+|+|+.|..
T Consensus 74 d~~~~A~~~GAd~v~~~~~ 92 (207)
T 2yw3_A 74 KEAEAALEAGAAFLVSPGL 92 (207)
T ss_dssp HHHHHHHHHTCSEEEESSC
T ss_pred HHHHHHHHcCCCEEEcCCC
Confidence 4556677778999988853
No 393
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=25.34 E-value=1.6e+02 Score=20.95 Aligned_cols=17 Identities=18% Similarity=0.518 Sum_probs=14.1
Q ss_pred HHHHHHHHHHcCcEEEe
Q 033342 70 MQGYCSLARESSMWLSL 86 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~ 86 (121)
++.+.++|+++++++++
T Consensus 277 l~~I~~l~~~~~~~l~v 293 (497)
T 2qma_A 277 LDFIADMAVKHDMWMHV 293 (497)
T ss_dssp HHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHcCCEEEE
Confidence 57788999999988864
No 394
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=25.28 E-value=1.1e+02 Score=19.99 Aligned_cols=65 Identities=22% Similarity=0.208 Sum_probs=32.1
Q ss_pred HHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCC
Q 033342 34 AASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGN 111 (121)
Q Consensus 34 a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~ 111 (121)
|...+++++++=|-+. +-+.. ......+.+.++.++.+..+++-+.... .-..+.+..+++. +|+
T Consensus 142 aL~~~p~lllLDEPts--~LD~~--------~~~~l~~~l~~l~~~~g~tvi~vtHd~~--~~~~~~d~v~~l~-~G~ 206 (253)
T 2nq2_C 142 AIASECKLILLDEPTS--ALDLA--------NQDIVLSLLIDLAQSQNMTVVFTTHQPN--QVVAIANKTLLLN-KQN 206 (253)
T ss_dssp HHHTTCSEEEESSSST--TSCHH--------HHHHHHHHHHHHHHTSCCEEEEEESCHH--HHHHHCSEEEEEE-TTE
T ss_pred HHHcCCCEEEEeCCcc--cCCHH--------HHHHHHHHHHHHHHhcCCEEEEEecCHH--HHHHhCCEEEEEe-CCe
Confidence 3345788888888554 21110 1123455566665554666655532210 1112345566665 565
No 395
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=25.18 E-value=54 Score=21.18 Aligned_cols=18 Identities=17% Similarity=0.313 Sum_probs=14.0
Q ss_pred eEEEEEEECCCCCEEeee
Q 033342 99 LCNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 99 ~~Ns~~~i~~~G~i~~~y 116 (121)
..-+.++|+++|+++..+
T Consensus 167 ~~p~~flID~~G~I~~~~ 184 (240)
T 3qpm_A 167 TLRGLFIIDEKGVLRQIT 184 (240)
T ss_dssp ECEEEEEECTTSBEEEEE
T ss_pred ccceEEEEcCCCeEEEEE
Confidence 456789999999987653
No 396
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=24.99 E-value=56 Score=20.56 Aligned_cols=18 Identities=22% Similarity=0.292 Sum_probs=14.1
Q ss_pred eEEEEEEECCCCCEEeee
Q 033342 99 LCNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 99 ~~Ns~~~i~~~G~i~~~y 116 (121)
..-+.++|+++|+++..+
T Consensus 141 ~~p~~~lID~~G~i~~~~ 158 (213)
T 2i81_A 141 SLRAFVLIDMNGIVQHLL 158 (213)
T ss_dssp ECEEEEEECTTSBEEEEE
T ss_pred cccEEEEECCCCEEEEEE
Confidence 456789999999987664
No 397
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=24.98 E-value=62 Score=23.30 Aligned_cols=22 Identities=9% Similarity=0.105 Sum_probs=19.0
Q ss_pred CCChHHHHHHHHHHHcCcEEEe
Q 033342 65 LDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 65 ~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
.+..+++.++++|+++++.+|+
T Consensus 244 p~~~fl~~lr~lc~~~gillI~ 265 (456)
T 4atq_A 244 PAEGFLPALSEWAKEKGIVFIA 265 (456)
T ss_dssp CCTTHHHHHHHHHHHHTCEEEE
T ss_pred cchhhhHHHHHHHhhcCCceEe
Confidence 3568999999999999998864
No 398
>3uh9_A Metallothiol transferase FOSB 2; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol; HET: MSE; 1.60A {Bacillus anthracis}
Probab=24.90 E-value=92 Score=17.57 Aligned_cols=43 Identities=7% Similarity=0.003 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEeee
Q 033342 69 IMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 69 ~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~~y 116 (121)
-++.+.+.+++.|+.++.+.... .. ....+++.+|+|..+..+
T Consensus 75 d~~~~~~~l~~~G~~~~~~~~~~---~~--~~~~~~~~DPdG~~iel~ 117 (145)
T 3uh9_A 75 ALDHLKEVLIQNDVNILPGRERD---ER--DQRSLYFTDPDGHKFEFH 117 (145)
T ss_dssp HHHHHHHHHHHTTCCBCCCCCCC---GG--GCCEEEEECTTCCEEEEE
T ss_pred HHHHHHHHHHHCCCeEecCCccC---CC--CeeEEEEEcCCCCEEEEE
Confidence 45566666667777765442111 11 125667899999887654
No 399
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=24.86 E-value=63 Score=18.94 Aligned_cols=17 Identities=18% Similarity=0.255 Sum_probs=12.8
Q ss_pred EEEEEEECCCCCEEeee
Q 033342 100 CNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y 116 (121)
+=+.++++++|+++..+
T Consensus 117 ~Pt~~~~d~~G~~~~~~ 133 (154)
T 2ju5_A 117 FPELVFIDAEGKQLARM 133 (154)
T ss_dssp SSEEEEECTTCCEEEEE
T ss_pred CCEEEEEcCCCCEEEEe
Confidence 34678898899987654
No 400
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=24.86 E-value=53 Score=20.20 Aligned_cols=27 Identities=7% Similarity=-0.004 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHC-CCcEEEccCCcc
Q 033342 23 NFATCSRLVKEAASA-GAKLLCFPENFS 49 (121)
Q Consensus 23 n~~~~~~~~~~a~~~-~~dlvv~PE~~~ 49 (121)
+.+.+.+.++++.+. ++|+|+.-=...
T Consensus 53 d~~~i~~~l~~a~~~~~~DlVittGG~g 80 (172)
T 1mkz_A 53 NRYAIRAQVSAWIASDDVQVVLITGGTG 80 (172)
T ss_dssp CHHHHHHHHHHHHHSSSCCEEEEESCCS
T ss_pred CHHHHHHHHHHHHhcCCCCEEEeCCCCC
Confidence 356667777777665 699998765554
No 401
>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}
Probab=24.84 E-value=1e+02 Score=17.35 Aligned_cols=43 Identities=19% Similarity=0.043 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEeee
Q 033342 69 IMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 69 ~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~~y 116 (121)
-++.+.+.+++.|+.++.+ .... ..| .-++++.+|+|..+..+
T Consensus 88 dv~~~~~~l~~~G~~~~~~-~~~~--~~g--~~~~~~~DPdG~~iel~ 130 (141)
T 2rbb_A 88 AVDKLVPVAIAAGATLIKA-PYET--YYH--WYQAVLLDPERNVFRIN 130 (141)
T ss_dssp HHHHHHHHHHHTTCEEEEE-EEEC--TTS--EEEEEEECTTSCEEEEE
T ss_pred HHHHHHHHHHHcCCeEecC-cccc--CCc--cEEEEEECCCCCEEEEE
Confidence 4556666667778877655 2221 222 35678899999877654
No 402
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=24.79 E-value=80 Score=20.36 Aligned_cols=31 Identities=26% Similarity=0.432 Sum_probs=21.1
Q ss_pred HHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEE
Q 033342 74 CSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIR 113 (121)
Q Consensus 74 ~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~ 113 (121)
.++++.+++.. + ..|..+-+.++|+|+|.+.
T Consensus 126 ~~vak~YGv~~------~---~~g~~~R~tFiID~~G~Ir 156 (216)
T 3sbc_A 126 HSLSRDYGVLI------E---EEGVALRGLFIIDPKGVIR 156 (216)
T ss_dssp SHHHHHHTCEE------T---TTTEECEEEEEECTTSBEE
T ss_pred CHHHHHcCCee------c---cCCceeeEEEEECCCCeEE
Confidence 34567777642 1 3445667899999999874
No 403
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=30.61 E-value=16 Score=25.13 Aligned_cols=16 Identities=19% Similarity=0.117 Sum_probs=8.5
Q ss_pred CCCcEEEccCCccCCC
Q 033342 37 AGAKLLCFPENFSYVG 52 (121)
Q Consensus 37 ~~~dlvv~PE~~~~~~ 52 (121)
.++++|+++....++|
T Consensus 163 ~~~~~v~~~~~~nptG 178 (392)
T 3b1d_A 163 NDVKLYLLCNPHNPGG 178 (392)
Confidence 3566777754433333
No 404
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=24.73 E-value=1.4e+02 Score=20.09 Aligned_cols=21 Identities=0% Similarity=0.116 Sum_probs=17.1
Q ss_pred CChHHHHHHHHHHHcCcEEEe
Q 033342 66 DGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 66 ~~~~~~~l~~~a~~~~~~ii~ 86 (121)
..+.++.+.++|+++++.++.
T Consensus 201 ~~~~l~~i~~l~~~~~~~li~ 221 (392)
T 3ruy_A 201 PAGFLKEALEVCKKENVLFVA 221 (392)
T ss_dssp CTTHHHHHHHHHHTTTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEE
Confidence 345689999999999998864
No 405
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=24.73 E-value=82 Score=21.65 Aligned_cols=14 Identities=29% Similarity=0.394 Sum_probs=11.1
Q ss_pred HCCCcEEEccCCcc
Q 033342 36 SAGAKLLCFPENFS 49 (121)
Q Consensus 36 ~~~~dlvv~PE~~~ 49 (121)
+.++|++++||.-.
T Consensus 183 a~ga~~iliPE~~~ 196 (319)
T 4a3s_A 183 AGGAESILIPEADY 196 (319)
T ss_dssp HHTCSEEEBTTBCC
T ss_pred ccCCCEEEecCCCC
Confidence 35899999999653
No 406
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=24.59 E-value=60 Score=18.31 Aligned_cols=18 Identities=17% Similarity=0.135 Sum_probs=12.4
Q ss_pred HHHHHHHCCCcEEEccCC
Q 033342 30 LVKEAASAGAKLLCFPEN 47 (121)
Q Consensus 30 ~~~~a~~~~~dlvv~PE~ 47 (121)
.++.|.+.++|+||..-.
T Consensus 94 I~~~a~~~~~dliV~G~~ 111 (141)
T 1jmv_A 94 LSDAIEQYDVDLLVTGHH 111 (141)
T ss_dssp HHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHhcCCCEEEEeCC
Confidence 344455678999998754
No 407
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=24.47 E-value=40 Score=19.29 Aligned_cols=17 Identities=35% Similarity=0.458 Sum_probs=13.1
Q ss_pred EEEEEEECCCCCEEeee
Q 033342 100 CNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y 116 (121)
+-+.++++++|+++..+
T Consensus 109 ~P~~~lid~~G~i~~~~ 125 (152)
T 2lja_A 109 IPRFILLDRDGKIISAN 125 (152)
T ss_dssp SCCEEEECTTSCEEESS
T ss_pred CCEEEEECCCCeEEEcc
Confidence 44678999999987654
No 408
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=24.31 E-value=1.4e+02 Score=20.62 Aligned_cols=19 Identities=5% Similarity=0.139 Sum_probs=15.5
Q ss_pred hHHHHHHHHHHHcCcEEEe
Q 033342 68 PIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~ 86 (121)
+.++.+.++|+++++.++.
T Consensus 218 ~~l~~l~~la~~~~~~li~ 236 (432)
T 3ei9_A 218 EQLTQLVEFAKKNGSIIVY 236 (432)
T ss_dssp HHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHcCcEEEE
Confidence 4578888899999998864
No 409
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=24.30 E-value=54 Score=20.60 Aligned_cols=26 Identities=12% Similarity=0.052 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHCCCcEEEccCCcc
Q 033342 24 FATCSRLVKEAASAGAKLLCFPENFS 49 (121)
Q Consensus 24 ~~~~~~~~~~a~~~~~dlvv~PE~~~ 49 (121)
.+.+.+.++++...++|+|+.-=...
T Consensus 75 ~~~I~~al~~a~~~~~DlVIttGGts 100 (185)
T 3rfq_A 75 EVDIRNALNTAVIGGVDLVVSVGGTG 100 (185)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEESCCS
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 34556666666557899999765544
No 410
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=24.30 E-value=91 Score=20.90 Aligned_cols=14 Identities=14% Similarity=0.119 Sum_probs=12.0
Q ss_pred HHHHHHHcCcEEEe
Q 033342 73 YCSLARESSMWLSL 86 (121)
Q Consensus 73 l~~~a~~~~~~ii~ 86 (121)
+.++|+++++.++.
T Consensus 175 l~~~~~~~~~~li~ 188 (370)
T 2z61_A 175 IYEFAYENIPYIIS 188 (370)
T ss_dssp HHHHHHHHCSEEEE
T ss_pred HHHHHHHcCCEEEE
Confidence 88999999988865
No 411
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=24.29 E-value=62 Score=18.23 Aligned_cols=19 Identities=16% Similarity=0.223 Sum_probs=13.1
Q ss_pred HHHHHHHCCCcEEEccCCc
Q 033342 30 LVKEAASAGAKLLCFPENF 48 (121)
Q Consensus 30 ~~~~a~~~~~dlvv~PE~~ 48 (121)
.++.|.+.++|+||..-.-
T Consensus 91 I~~~a~~~~~dliV~G~~~ 109 (137)
T 2z08_A 91 ILQAARAEKADLIVMGTRG 109 (137)
T ss_dssp HHHHHHHTTCSEEEEESSC
T ss_pred HHHHHHHcCCCEEEECCCC
Confidence 3444556789999987543
No 412
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=24.26 E-value=1e+02 Score=21.31 Aligned_cols=25 Identities=20% Similarity=0.089 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEc
Q 033342 20 LAANFATCSRLVKEAASAGAKLLCF 44 (121)
Q Consensus 20 ~~~n~~~~~~~~~~a~~~~~dlvv~ 44 (121)
.+..++.+.+.++.|..-|++.|++
T Consensus 111 r~~~i~~~~~~i~~A~~LGa~~vvv 135 (386)
T 1muw_A 111 RRYALRKTIRNIDLAVELGAKTYVA 135 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 3567788889999888889987765
No 413
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=24.26 E-value=1.1e+02 Score=20.33 Aligned_cols=24 Identities=29% Similarity=0.361 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHCCCcEE-EccC
Q 033342 23 NFATCSRLVKEAASAGAKLL-CFPE 46 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlv-v~PE 46 (121)
+.+...++.+.|.+.|+|-+ +.|=
T Consensus 73 ~t~~ai~la~~A~~~Gadavlv~~P 97 (283)
T 2pcq_A 73 TLPQAEGALLEAKAAGAMALLATPP 97 (283)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred CHHHHHHHHHHHHhcCCCEEEecCC
Confidence 45667778888888899954 4343
No 414
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=24.23 E-value=49 Score=20.53 Aligned_cols=26 Identities=8% Similarity=-0.020 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHC-CCcEEEccCCcc
Q 033342 24 FATCSRLVKEAASA-GAKLLCFPENFS 49 (121)
Q Consensus 24 ~~~~~~~~~~a~~~-~~dlvv~PE~~~ 49 (121)
.+.+.+.++++.++ ++|+|+.-=...
T Consensus 66 ~~~I~~al~~a~~~~~~DlVittGG~s 92 (178)
T 2pjk_A 66 KIKILKAFTDALSIDEVDVIISTGGTG 92 (178)
T ss_dssp HHHHHHHHHHHHTCTTCCEEEEESCCS
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 45566666666655 599999655443
No 415
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=24.17 E-value=1.2e+02 Score=20.61 Aligned_cols=19 Identities=5% Similarity=0.078 Sum_probs=15.8
Q ss_pred hHHHHHHHHHHHcCcEEEe
Q 033342 68 PIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~ 86 (121)
..++.+.++|+++++.+++
T Consensus 155 ~~l~~i~~~~~~~~~~li~ 173 (379)
T 3ke3_A 155 EYIKALSEAVHSVGGLLVI 173 (379)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHcCCEEEE
Confidence 4588899999999988864
No 416
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=24.11 E-value=1.1e+02 Score=18.05 Aligned_cols=20 Identities=10% Similarity=0.029 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHcCcEE-Eecc
Q 033342 69 IMQGYCSLARESSMWL-SLGG 88 (121)
Q Consensus 69 ~~~~l~~~a~~~~~~i-i~G~ 88 (121)
+...+..+|+++++++ .+++
T Consensus 63 ~~~~l~~lc~~~~VP~~~v~s 83 (134)
T 2ale_A 63 ILLHLPLLCEDKNVPYVFVPS 83 (134)
T ss_dssp GGTHHHHHHHHHTCCEEEESC
T ss_pred HHHHHHHHHHhcCCCEEEECC
Confidence 5677888999999885 3444
No 417
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=23.83 E-value=1.4e+02 Score=19.79 Aligned_cols=47 Identities=9% Similarity=-0.007 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 23 NFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
.-+.+.++++.+.+.++..|+. |... +....+.+.+.|++.|+.++.
T Consensus 197 s~~~l~~l~~~ik~~~v~~if~-e~~~----------------~~~~~~~l~~~a~~~g~~v~~ 243 (282)
T 3mfq_A 197 ANSDMIETVNLIIDHNIKAIFT-ESTT----------------NPERMKKLQEAVKAKGGQVEV 243 (282)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEC-BTTS----------------CTHHHHHHHHHHHTTSCCCEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEE-eCCC----------------ChHHHHHHHHHHHhcCCceEE
Confidence 3455666666666778887754 4332 345678888889998876644
No 418
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=23.74 E-value=81 Score=21.14 Aligned_cols=19 Identities=16% Similarity=0.219 Sum_probs=11.8
Q ss_pred HHHHHHHCCCcEEEccCCc
Q 033342 30 LVKEAASAGAKLLCFPENF 48 (121)
Q Consensus 30 ~~~~a~~~~~dlvv~PE~~ 48 (121)
++.+|...|||.|++==..
T Consensus 118 QI~eAr~~GADaILLI~a~ 136 (258)
T 4a29_A 118 QIDDAYNLGADTVLLIVKI 136 (258)
T ss_dssp HHHHHHHHTCSEEEEEGGG
T ss_pred HHHHHHHcCCCeeehHHhh
Confidence 3555666788887764333
No 419
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=23.74 E-value=45 Score=22.40 Aligned_cols=20 Identities=35% Similarity=0.229 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHCCCcEE
Q 033342 23 NFATCSRLVKEAASAGAKLL 42 (121)
Q Consensus 23 n~~~~~~~~~~a~~~~~dlv 42 (121)
+.+...++.+.|.+.|+|-+
T Consensus 81 ~t~~ai~la~~a~~~Gadav 100 (291)
T 3a5f_A 81 NTAASIAMSKWAESIGVDGL 100 (291)
T ss_dssp SHHHHHHHHHHHHHTTCSEE
T ss_pred cHHHHHHHHHHHHhcCCCEE
Confidence 45667778888888899943
No 420
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=23.72 E-value=1.5e+02 Score=18.96 Aligned_cols=59 Identities=12% Similarity=0.177 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHCCCcEEEccCCccCCC---CCCchhhhcccCCCChHHHHHHHHHHHc-CcEEEecc
Q 033342 26 TCSRLVKEAASAGAKLLCFPENFSYVG---DKDADNIKIAEPLDGPIMQGYCSLARES-SMWLSLGG 88 (121)
Q Consensus 26 ~~~~~~~~a~~~~~dlvv~PE~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~a~~~-~~~ii~G~ 88 (121)
.+.+++++|.+.|.+.|++-+-.. .. +.... .....-..+.+.+.++.+++ ++.++.|.
T Consensus 17 ~~ee~v~~A~~~Gl~~iaiTDH~~-~~~~~~~~~~---~~~~~~~~y~~~~~~~~~~~~~i~i~~G~ 79 (267)
T 2yxo_A 17 HPEAYLEEARAKGLKGVVFTDHSP-MPPWYDPESR---MRLEALPFYLLALERVRERAQDLYVGIGL 79 (267)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEECC-CCTTSSGGGS---CCGGGHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred CHHHHHHHHHHcCCCEEEEcCCCC-CCcccCcccc---ccHHHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence 344788899999999888877665 22 11000 00001123355566666665 88999993
No 421
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=23.72 E-value=47 Score=20.96 Aligned_cols=20 Identities=10% Similarity=0.240 Sum_probs=15.8
Q ss_pred HHHHHHHHCCCcEEEccCCc
Q 033342 29 RLVKEAASAGAKLLCFPENF 48 (121)
Q Consensus 29 ~~~~~a~~~~~dlvv~PE~~ 48 (121)
+.++.+.+.|+++|-+.+-.
T Consensus 17 ~~~~~a~~~Gv~~v~lr~k~ 36 (210)
T 3ceu_A 17 KIITALFEEGLDILHLRKPE 36 (210)
T ss_dssp HHHHHHHHTTCCEEEECCSS
T ss_pred HHHHHHHHCCCCEEEEccCC
Confidence 56677778899999998754
No 422
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=23.69 E-value=1.5e+02 Score=20.63 Aligned_cols=17 Identities=12% Similarity=0.286 Sum_probs=14.4
Q ss_pred HHHHHHHHHHcCcEEEe
Q 033342 70 MQGYCSLARESSMWLSL 86 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~ 86 (121)
++.+.++|+++++.+++
T Consensus 171 l~~i~~la~~~g~~liv 187 (400)
T 3nmy_A 171 IAAIAVIARKHGLLTVV 187 (400)
T ss_dssp HHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCEEEE
Confidence 77899999999988864
No 423
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=23.69 E-value=1.3e+02 Score=19.99 Aligned_cols=28 Identities=11% Similarity=-0.022 Sum_probs=23.2
Q ss_pred cCHHHHHHHHHHHHHHHHHCCCcEEEcc
Q 033342 18 NDLAANFATCSRLVKEAASAGAKLLCFP 45 (121)
Q Consensus 18 ~~~~~n~~~~~~~~~~a~~~~~dlvv~P 45 (121)
.+.++-.+...+.++...+.|+|+||.+
T Consensus 49 ~~~~~i~~~~~~~~~~L~~~g~~~iVIA 76 (268)
T 3out_A 49 KSRATIQKFAAQTAKFLIDQEVKAIIIA 76 (268)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCSEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEe
Confidence 4567777888888888888999999987
No 424
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=23.69 E-value=44 Score=18.64 Aligned_cols=22 Identities=9% Similarity=-0.105 Sum_probs=18.2
Q ss_pred CChHHHHHHHHHHHcCcEEEec
Q 033342 66 DGPIMQGYCSLARESSMWLSLG 87 (121)
Q Consensus 66 ~~~~~~~l~~~a~~~~~~ii~G 87 (121)
.+.....+.+.|++++++|+--
T Consensus 25 ~~~~A~~I~e~A~e~gVPi~e~ 46 (93)
T 2vt1_B 25 TNQCALAVRKYANEVGIPTVRD 46 (93)
T ss_dssp EHHHHHHHHHHHHHTTCCEEEC
T ss_pred CcHHHHHHHHHHHHcCCCEEEC
Confidence 4677888999999999999643
No 425
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=23.67 E-value=96 Score=20.48 Aligned_cols=40 Identities=10% Similarity=0.171 Sum_probs=21.9
Q ss_pred cccEEEEEEec-----------cc-cCHHHHHHHHHHHHHHHHHCCCcEEEc
Q 033342 5 HSVRVAVAQMT-----------SI-NDLAANFATCSRLVKEAASAGAKLLCF 44 (121)
Q Consensus 5 ~~~~ia~vQ~~-----------~~-~~~~~n~~~~~~~~~~a~~~~~dlvv~ 44 (121)
++|||..+-.. .. ......-..+..+++...+.|.++.++
T Consensus 2 ~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~ 53 (342)
T 2iuy_A 2 RPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLL 53 (342)
T ss_dssp -CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEE
Confidence 35899998776 11 111222334445555555668777655
No 426
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=23.53 E-value=61 Score=20.44 Aligned_cols=18 Identities=17% Similarity=0.218 Sum_probs=14.0
Q ss_pred eEEEEEEECCCCCEEeee
Q 033342 99 LCNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 99 ~~Ns~~~i~~~G~i~~~y 116 (121)
..-+.++|+++|+++..+
T Consensus 146 ~~P~~~liD~~G~I~~~~ 163 (220)
T 1zye_A 146 ALRGLFIIDPNGVIKHLS 163 (220)
T ss_dssp ECEEEEEECTTSBEEEEE
T ss_pred ccceEEEECCCCEEEEEE
Confidence 456889999999987653
No 427
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=23.49 E-value=2e+02 Score=20.44 Aligned_cols=50 Identities=18% Similarity=0.248 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHCC--CcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 24 FATCSRLVKEAASAG--AKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 24 ~~~~~~~~~~a~~~~--~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
.+.+++.+......+ +.+|++.-...++|.. + -++.+.++|+++++++++
T Consensus 229 ~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i-----------~--~l~~I~~la~~~g~~lhv 280 (504)
T 2okj_A 229 PADFEAKILEAKQKGYVPFYVNATAGTTVYGAF-----------D--PIQEIADICEKYNLWLHV 280 (504)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCB-----------C--CHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCc-----------C--CHHHHHHHHHHcCCEEEE
Confidence 344555554433333 5667664443323321 1 167889999999998854
No 428
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=23.46 E-value=1e+02 Score=20.44 Aligned_cols=19 Identities=16% Similarity=0.214 Sum_probs=15.5
Q ss_pred hHHHHHHHHHHHcCcEEEe
Q 033342 68 PIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~ 86 (121)
+.++.+.++|+++++.++.
T Consensus 158 ~~l~~l~~~~~~~~~~li~ 176 (359)
T 3pj0_A 158 EELEKISEYCHEQGISLHL 176 (359)
T ss_dssp HHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHcCCEEEE
Confidence 5577789999999998865
No 429
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=23.30 E-value=1.5e+02 Score=20.48 Aligned_cols=22 Identities=18% Similarity=0.149 Sum_probs=18.2
Q ss_pred CCChHHHHHHHHHHHcCcEEEe
Q 033342 65 LDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 65 ~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
.+.++++.+.++|+++++.++.
T Consensus 218 ~~~~~l~~l~~l~~~~~~lli~ 239 (429)
T 4e77_A 218 PLPEFLPGLRALCDEFGALLII 239 (429)
T ss_dssp CCTTHHHHHHHHHHHHTCEEEE
T ss_pred CCHHHHHHHHHHHHHcCCEEEE
Confidence 3556789999999999998864
No 430
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=23.29 E-value=74 Score=19.41 Aligned_cols=19 Identities=16% Similarity=0.228 Sum_probs=14.8
Q ss_pred ceEEEEEEECCCCCEEeee
Q 033342 98 RLCNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 98 ~~~Ns~~~i~~~G~i~~~y 116 (121)
..+-+.++++++|+++..+
T Consensus 123 ~~~P~~~lid~~G~i~~~~ 141 (197)
T 1qmv_A 123 IAYRGLFIIDGKGVLRQIT 141 (197)
T ss_dssp EECEEEEEECTTSBEEEEE
T ss_pred ceeeEEEEECCCCcEEEEE
Confidence 3566889999999987654
No 431
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=23.24 E-value=72 Score=20.13 Aligned_cols=19 Identities=16% Similarity=0.200 Sum_probs=15.0
Q ss_pred eEEEEEEECCCCCEEeeee
Q 033342 99 LCNTHVLLDDAGNIRSTYR 117 (121)
Q Consensus 99 ~~Ns~~~i~~~G~i~~~y~ 117 (121)
.+-+.++|+++|+++..+.
T Consensus 159 ~~P~~~lID~~G~I~~~~~ 177 (222)
T 3ztl_A 159 AFRGLFIIDPNGILRQITI 177 (222)
T ss_dssp BCEEEEEECTTSEEEEEEE
T ss_pred ccceEEEECCCCeEEEEEe
Confidence 4567899999999977653
No 432
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A*
Probab=23.20 E-value=59 Score=21.13 Aligned_cols=13 Identities=8% Similarity=0.225 Sum_probs=8.9
Q ss_pred EEEEEECCCCCEEe
Q 033342 101 NTHVLLDDAGNIRS 114 (121)
Q Consensus 101 Ns~~~i~~~G~i~~ 114 (121)
+..+++. +|+++.
T Consensus 212 d~v~~l~-~G~i~~ 224 (250)
T 2d2e_A 212 DKVHVMM-DGRVVA 224 (250)
T ss_dssp SEEEEEE-TTEEEE
T ss_pred CEEEEEE-CCEEEE
Confidence 6677775 787754
No 433
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=23.14 E-value=2.1e+02 Score=20.56 Aligned_cols=17 Identities=18% Similarity=0.612 Sum_probs=14.5
Q ss_pred HHHHHHHHHHcCcEEEe
Q 033342 70 MQGYCSLARESSMWLSL 86 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~ 86 (121)
++.+.++|+++++++++
T Consensus 267 l~~I~~ia~~~~~~lhv 283 (511)
T 3vp6_A 267 IQEIADICEKYNLWLHV 283 (511)
T ss_dssp HHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHcCCEEEE
Confidence 67899999999999864
No 434
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=23.07 E-value=78 Score=17.49 Aligned_cols=17 Identities=12% Similarity=0.317 Sum_probs=12.7
Q ss_pred EEEEEEECCCCCEEeee
Q 033342 100 CNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y 116 (121)
+=+.++++++|+++..+
T Consensus 87 ~Pt~~~~d~~G~~~~~~ 103 (130)
T 2kuc_A 87 YPTLLFINSSGEVVYRL 103 (130)
T ss_dssp SCEEEEECTTSCEEEEE
T ss_pred CCEEEEECCCCcEEEEe
Confidence 45678888899887654
No 435
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=23.00 E-value=72 Score=18.05 Aligned_cols=20 Identities=15% Similarity=0.119 Sum_probs=13.5
Q ss_pred HHHHHHHHCCCcEEEccCCc
Q 033342 29 RLVKEAASAGAKLLCFPENF 48 (121)
Q Consensus 29 ~~~~~a~~~~~dlvv~PE~~ 48 (121)
.+++.|.+.++|+||..-.-
T Consensus 101 ~I~~~a~~~~~dliV~G~~~ 120 (147)
T 3hgm_A 101 TIVRFARKRECDLVVIGAQG 120 (147)
T ss_dssp HHHHHHHHTTCSEEEECSSC
T ss_pred HHHHHHHHhCCCEEEEeCCC
Confidence 34455566789999987543
No 436
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=23.00 E-value=1.7e+02 Score=19.66 Aligned_cols=17 Identities=18% Similarity=0.376 Sum_probs=14.1
Q ss_pred HHHHHHHHHHcCcEEEe
Q 033342 70 MQGYCSLARESSMWLSL 86 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~ 86 (121)
++.+.++|+++++.++.
T Consensus 180 l~~i~~l~~~~~~~li~ 196 (405)
T 2vi8_A 180 FAKFREIADEVGAYLMV 196 (405)
T ss_dssp HHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHcCCEEEE
Confidence 57889999999988864
No 437
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=22.94 E-value=62 Score=21.93 Aligned_cols=17 Identities=12% Similarity=0.280 Sum_probs=14.4
Q ss_pred HHHHHHHHHHcCcEEEe
Q 033342 70 MQGYCSLARESSMWLSL 86 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~ 86 (121)
++.+.++|+++++.++.
T Consensus 178 l~~i~~la~~~~~~li~ 194 (400)
T 3vax_A 178 VAELAQQLRATPTYLHV 194 (400)
T ss_dssp HHHHHHHHTTSSCEEEE
T ss_pred HHHHHHHHHhcCCEEEE
Confidence 57899999999988864
No 438
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=22.93 E-value=1.8e+02 Score=19.74 Aligned_cols=43 Identities=12% Similarity=0.140 Sum_probs=23.1
Q ss_pred HHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHH
Q 033342 32 KEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARE 79 (121)
Q Consensus 32 ~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~ 79 (121)
+...+.|+|.|-+.+.+. .....+.+.++ .-++...+.+..++
T Consensus 200 ~~~~~aGad~iqi~D~~~-~~lsp~~f~ef----~~p~~~~i~~~i~~ 242 (353)
T 1j93_A 200 RYQADSGAQAVQIFDSWA-TELSPVDFEEF----SLPYLKQIVDSVKL 242 (353)
T ss_dssp HHHHHTTCSEEEEECGGG-GGSCHHHHHHH----THHHHHHHHHHHHH
T ss_pred HHHHHhCCCEEEEeCccc-ccCCHHHHHHH----hHHHHHHHHHHHHH
Confidence 334467999999999874 22222222222 23455555555544
No 439
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=22.91 E-value=72 Score=20.60 Aligned_cols=18 Identities=22% Similarity=0.460 Sum_probs=11.8
Q ss_pred HHHHHHHHCCCcEEEccC
Q 033342 29 RLVKEAASAGAKLLCFPE 46 (121)
Q Consensus 29 ~~~~~a~~~~~dlvv~PE 46 (121)
+.++.|...|+|.|+.|.
T Consensus 89 d~~~~A~~aGAd~v~~p~ 106 (225)
T 1mxs_A 89 SMFAAVEAAGAQFVVTPG 106 (225)
T ss_dssp HHHHHHHHHTCSSEECSS
T ss_pred HHHHHHHHCCCCEEEeCC
Confidence 445556667788887764
No 440
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=22.86 E-value=1.7e+02 Score=19.40 Aligned_cols=25 Identities=16% Similarity=0.222 Sum_probs=20.9
Q ss_pred cCHHHHHHHHHHHHHHHHHCCCcEE
Q 033342 18 NDLAANFATCSRLVKEAASAGAKLL 42 (121)
Q Consensus 18 ~~~~~n~~~~~~~~~~a~~~~~dlv 42 (121)
.+.+++++++.+.++.|.+.|..+-
T Consensus 113 ~~~~e~~~~~~~~v~~a~~~G~~V~ 137 (295)
T 1ydn_A 113 CTIAESIERLSPVIGAAINDGLAIR 137 (295)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 4678899999999999988887753
No 441
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=22.86 E-value=62 Score=19.67 Aligned_cols=26 Identities=4% Similarity=0.018 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHH-CCCcEEEccCCcc
Q 033342 24 FATCSRLVKEAAS-AGAKLLCFPENFS 49 (121)
Q Consensus 24 ~~~~~~~~~~a~~-~~~dlvv~PE~~~ 49 (121)
.+.+.+.++++.+ .++|+|+.-=...
T Consensus 56 ~~~i~~~l~~~~~~~~~DlVittGG~g 82 (167)
T 1uuy_A 56 VERIKDILQKWSDVDEMDLILTLGGTG 82 (167)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEEESCCS
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 3456666666655 5899998766554
No 442
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=22.81 E-value=65 Score=23.34 Aligned_cols=22 Identities=9% Similarity=-0.020 Sum_probs=18.9
Q ss_pred CCChHHHHHHHHHHHcCcEEEe
Q 033342 65 LDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 65 ~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
.+..+++.++++|+++++.+|+
T Consensus 254 p~~~fl~~lr~lc~~~gilLI~ 275 (473)
T 4e3q_A 254 PAKGYFQAILPILRKYDIPVIS 275 (473)
T ss_dssp CCTTHHHHHHHHHHHTTCCEEE
T ss_pred CCHHHHHHHHHHhcccceEEec
Confidence 4568999999999999998864
No 443
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=22.81 E-value=1.6e+02 Score=20.60 Aligned_cols=17 Identities=0% Similarity=0.206 Sum_probs=14.1
Q ss_pred HHHHHHHHHHcCcEEEe
Q 033342 70 MQGYCSLARESSMWLSL 86 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~ 86 (121)
++.+.++|+++++.+++
T Consensus 233 l~~i~~la~~~g~~vi~ 249 (465)
T 3e9k_A 233 IPAITKAGQAKGCYVGF 249 (465)
T ss_dssp HHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCEEEE
Confidence 57788999999998864
No 444
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=22.80 E-value=1.7e+02 Score=19.56 Aligned_cols=39 Identities=15% Similarity=0.090 Sum_probs=22.2
Q ss_pred CcccEEEEEEeccccCHHHHHHHHHHHHHHHHHCCCcEEE
Q 033342 4 AHSVRVAVAQMTSINDLAANFATCSRLVKEAASAGAKLLC 43 (121)
Q Consensus 4 ~~~~~ia~vQ~~~~~~~~~n~~~~~~~~~~a~~~~~dlvv 43 (121)
+++|||-+|..++..+ .-|..-....++.+.+.|.++-+
T Consensus 20 m~~MKiLII~aHP~~~-S~n~aL~~~~~~~l~~~G~eV~v 58 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPR-SLNGALKNFAIRHLQQAGHEVQV 58 (280)
T ss_dssp --CCEEEEEECCSCTT-SHHHHHHHHHHHHHHHTTCEEEE
T ss_pred hhCCeEEEEEeCCCCc-cHHHHHHHHHHHHHHHCCCeEEE
Confidence 4679999998887522 12333444555555566665544
No 445
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=22.78 E-value=1.3e+02 Score=22.37 Aligned_cols=51 Identities=14% Similarity=-0.001 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEecc
Q 033342 26 TCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGG 88 (121)
Q Consensus 26 ~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~ 88 (121)
.+.+.++++.+.|+++|-+=|-.. ... ++ .+....+.++++++++.+++..
T Consensus 26 ~l~~~ve~al~~Gv~~vQlR~K~~-~~~------~~-----~~~a~~l~~l~~~~~v~liIND 76 (540)
T 3nl6_A 26 TLYGQVEAGLQNGVTLVQIREKDA-DTK------FF-----IEEALQIKELCHAHNVPLIIND 76 (540)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSSS-CTT------HH-----HHHHHHHHHHHHHTTCCEEECS
T ss_pred hHHHHHHHHHHCCCCEEEEecCCC-CHH------HH-----HHHHHHHHHHHHhcCCEEEEeC
Confidence 356677777788999999988664 110 11 1345677888899998887753
No 446
>3exm_A Phosphatase SC4828; nucleoside diphosphatase, GDP/UDP'ASE, non-HYD GDP analogue, lipocalcin fold, metalloprotein, hydrolase; HET: GP2; 1.65A {Streptomyces coelicolor A3} PDB: 3cbt_A* 3bxt_A
Probab=22.77 E-value=64 Score=21.33 Aligned_cols=23 Identities=9% Similarity=0.127 Sum_probs=19.0
Q ss_pred CCCceEEEEEEECCCCCEEeeee
Q 033342 95 DDARLCNTHVLLDDAGNIRSTYR 117 (121)
Q Consensus 95 ~~~~~~Ns~~~i~~~G~i~~~y~ 117 (121)
..|..||...+++++|++.+.|-
T Consensus 111 ~~G~~ysV~~~~d~~G~f~~wY~ 133 (237)
T 3exm_A 111 RPGEAWSVWLFWDPGWRFKNWYV 133 (237)
T ss_dssp CTTCSEEEEEEEETTTEEEEEEE
T ss_pred cCCCCEEEEEEEcCCCCEEEEEE
Confidence 45678999999999999888774
No 447
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=22.75 E-value=54 Score=20.04 Aligned_cols=18 Identities=17% Similarity=0.222 Sum_probs=14.4
Q ss_pred eEEEEEEECCCCCEEeee
Q 033342 99 LCNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 99 ~~Ns~~~i~~~G~i~~~y 116 (121)
..-+.++++++|+++..+
T Consensus 122 ~~P~~~lid~~G~i~~~~ 139 (198)
T 1zof_A 122 ALRGAFLIDKNMKVRHAV 139 (198)
T ss_dssp ECEEEEEEETTTEEEEEE
T ss_pred ccceEEEECCCCEEEEEE
Confidence 456789999999987765
No 448
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=22.75 E-value=62 Score=19.62 Aligned_cols=27 Identities=11% Similarity=0.084 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHC-CCcEEEccCCcc
Q 033342 23 NFATCSRLVKEAASA-GAKLLCFPENFS 49 (121)
Q Consensus 23 n~~~~~~~~~~a~~~-~~dlvv~PE~~~ 49 (121)
+.+.+.+.++++.+. ++|+|+.-=...
T Consensus 46 d~~~i~~~l~~~~~~~~~DlVittGG~g 73 (164)
T 2is8_A 46 EPPMIKKVLRLWADREGLDLILTNGGTG 73 (164)
T ss_dssp CHHHHHHHHHHHHHTSCCSEEEEESCCS
T ss_pred CHHHHHHHHHHHHhcCCCCEEEEcCCCC
Confidence 345666666666664 799998765554
No 449
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=22.75 E-value=1.7e+02 Score=20.62 Aligned_cols=52 Identities=12% Similarity=0.057 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 24 FATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 24 ~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
++.+.+.++.+ ..+.-+++.+=...++|.. .+.+..+.+.++++++++.++.
T Consensus 177 ~~~~~~~l~~~-~~~~~vll~~~p~NPtG~~----------~~~~~~~~i~~~~~~~~~~~~~ 228 (420)
T 4h51_A 177 FEGMKKDILAA-PDGSVFILHQCAHNPTGVD----------PSQEQWNEIASLMLAKHHQVFF 228 (420)
T ss_dssp HHHHHHHHHHS-CSSCEEEEESSSCTTTCCC----------CCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHhcc-CCCcEEEEeCCCCCCCCCC----------CCHHHHHHHHHHHHhcCceEee
Confidence 34444444432 3445555555444556654 2345566777777777776653
No 450
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=22.74 E-value=45 Score=13.40 Aligned_cols=15 Identities=7% Similarity=0.268 Sum_probs=9.7
Q ss_pred EEEEEECCCCCEEee
Q 033342 101 NTHVLLDDAGNIRST 115 (121)
Q Consensus 101 Ns~~~i~~~G~i~~~ 115 (121)
.++.+.+.+|+++..
T Consensus 5 ~ss~IYD~~g~~i~~ 19 (26)
T 2v2f_A 5 TSSKIYDNKNQLIAD 19 (26)
T ss_pred CCCEEEeCCCCEeee
Confidence 345666777877654
No 451
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=22.72 E-value=1.3e+02 Score=19.91 Aligned_cols=16 Identities=13% Similarity=0.287 Sum_probs=9.1
Q ss_pred CCCcEEEccCCccCCC
Q 033342 37 AGAKLLCFPENFSYVG 52 (121)
Q Consensus 37 ~~~dlvv~PE~~~~~~ 52 (121)
.++++|++..-..++|
T Consensus 140 ~~~~~v~l~~p~nptG 155 (354)
T 3ly1_A 140 SGPSIVYLVNPNNPTG 155 (354)
T ss_dssp SSCEEEEEESSCTTTC
T ss_pred CCCCEEEEeCCCCCcC
Confidence 5678887743333334
No 452
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=22.66 E-value=1.2e+02 Score=20.82 Aligned_cols=41 Identities=20% Similarity=0.177 Sum_probs=22.3
Q ss_pred CcccEEEEEEecccc-------CHHHHHHHHHHHHHHHHHCCCcEEEc
Q 033342 4 AHSVRVAVAQMTSIN-------DLAANFATCSRLVKEAASAGAKLLCF 44 (121)
Q Consensus 4 ~~~~~ia~vQ~~~~~-------~~~~n~~~~~~~~~~a~~~~~dlvv~ 44 (121)
+.+|||+++-..... .....-..+..+.+...+.|.++.|+
T Consensus 18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~ 65 (438)
T 3c48_A 18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIY 65 (438)
T ss_dssp -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEE
T ss_pred cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEE
Confidence 467999999865421 22223344555555555667666544
No 453
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=22.52 E-value=1.1e+02 Score=16.93 Aligned_cols=15 Identities=20% Similarity=0.206 Sum_probs=8.1
Q ss_pred CCCCcccEEEEEEec
Q 033342 1 MAGAHSVRVAVAQMT 15 (121)
Q Consensus 1 ~~~~~~~~ia~vQ~~ 15 (121)
|+.+...||.++--+
T Consensus 1 M~~~~~~~iLivdd~ 15 (140)
T 3grc_A 1 MSLAPRPRILICEDD 15 (140)
T ss_dssp ----CCSEEEEECSC
T ss_pred CCCCCCCCEEEEcCC
Confidence 666667888888654
No 454
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=22.51 E-value=85 Score=21.63 Aligned_cols=39 Identities=15% Similarity=0.258 Sum_probs=23.5
Q ss_pred ccEEEEEEecccc----CH---------HHHHHHHHHHHHHHHHCCCcEEEc
Q 033342 6 SVRVAVAQMTSIN----DL---------AANFATCSRLVKEAASAGAKLLCF 44 (121)
Q Consensus 6 ~~~ia~vQ~~~~~----~~---------~~n~~~~~~~~~~a~~~~~dlvv~ 44 (121)
.+|||++-+-.+. +. ..-.+.+.+.+.++.++|||+||.
T Consensus 156 gvkIgviG~~~p~~~~~~~~~~~g~~~~~d~~e~~~~~v~~lr~~g~D~II~ 207 (339)
T 3jyf_A 156 TLRIGYIGFVPPQIMTWDKANLNGKVTVNDITETARKYIPEMRAKGADVVVV 207 (339)
T ss_dssp EEEEEEEEECCTTHHHHTHHHHTTTEEECCHHHHHHHHHHHHHHTTCSEEEE
T ss_pred CeEEEEEecccCcccccccccccCCeEEcCHHHHHHHHHHHHHhcCCCEEEE
Confidence 4799988765321 11 112355666666666789998664
No 455
>2nyd_A UPF0135 protein SA1388; hypothetical protein SA1388, selenomethionine SAD, unknown F; 2.00A {Staphylococcus aureus subsp} PDB: 3lnl_A*
Probab=22.40 E-value=2.1e+02 Score=20.14 Aligned_cols=53 Identities=13% Similarity=0.053 Sum_probs=31.9
Q ss_pred HHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEecc
Q 033342 27 CSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGG 88 (121)
Q Consensus 27 ~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~ 88 (121)
..+.+++|.+.+||+||.=.-.++.+.. .. ..+.. ..+-..+.++++.+..-.
T Consensus 50 t~~Vv~eAi~~~adlIItHHPlif~~~k-----~i--~~~~~--~r~i~~li~~~Ialya~H 102 (370)
T 2nyd_A 50 TLEVVNEAIEKGYNTIISHHPLIFKGVT-----SL--KANGY--GLIIRKLIQHDINLIAMH 102 (370)
T ss_dssp CHHHHHHHHHHTCCEEEESSCSSCSCCS-----CC--CSSTH--HHHHHHHHHTTCEEEECC
T ss_pred CHHHHHHHHHCCCCEEEECCCcccCCcc-----cc--CcCCH--HHHHHHHHHCCCeEEEee
Confidence 4567788888999999987766522211 11 12222 555555666788776553
No 456
>3sig_A PArg, poly(ADP-ribose) glycohydrolase; HET: AR6; 1.28A {Thermomonospora curvata} PDB: 3sih_A 3sii_A* 3sij_A
Probab=22.35 E-value=1.3e+02 Score=20.32 Aligned_cols=28 Identities=11% Similarity=0.048 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEccCCc
Q 033342 21 AANFATCSRLVKEAASAGAKLLCFPENF 48 (121)
Q Consensus 21 ~~n~~~~~~~~~~a~~~~~dlvv~PE~~ 48 (121)
+...+++...++.|..+|.+-||||=..
T Consensus 194 ~~l~~rir~vL~iA~~~g~~~LVLGA~G 221 (277)
T 3sig_A 194 RVLRGRAAKVLAAARHHGHRRLVLGAWG 221 (277)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEECCcc
Confidence 4467888888888999999999999754
No 457
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=22.24 E-value=1.5e+02 Score=20.24 Aligned_cols=17 Identities=12% Similarity=0.284 Sum_probs=14.5
Q ss_pred HHHHHHHHHHcCcEEEe
Q 033342 70 MQGYCSLARESSMWLSL 86 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~ 86 (121)
++.+.++|+++++.++.
T Consensus 168 l~~i~~l~~~~~~~li~ 184 (398)
T 2rfv_A 168 IETVAGIAHQQGALLVV 184 (398)
T ss_dssp HHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCEEEE
Confidence 78899999999988864
No 458
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=22.22 E-value=1.5e+02 Score=21.15 Aligned_cols=68 Identities=13% Similarity=0.048 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHH--------HHCCCcEEEccCCcc---CCCCCCchhhhcccC-CCChHHHHHHHHHHHcCcEEEeccc
Q 033342 22 ANFATCSRLVKEA--------ASAGAKLLCFPENFS---YVGDKDADNIKIAEP-LDGPIMQGYCSLARESSMWLSLGGF 89 (121)
Q Consensus 22 ~n~~~~~~~~~~a--------~~~~~dlvv~PE~~~---~~~~~~~~~~~~~~~-~~~~~~~~l~~~a~~~~~~ii~G~~ 89 (121)
..++.+.+.+... ++-|++.|-++=.+- ..||...++...... -..+-++.|.+.|++.||.|++=.+
T Consensus 24 Gdl~gi~~~LdyL~~~~~~~~~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~d~~~Lv~~aH~~Gi~VilD~V 103 (488)
T 1wza_A 24 GDLKGIIEKLDYLNDGDPETIADLGVNGIWLMPIFKSPSYHGYDVTDYYKINPDYGTLEDFHKLVEAAHQRGIKVIIDLP 103 (488)
T ss_dssp CCHHHHHHTHHHHCCSCTTCCSSCCCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCHHHHHHhhhhhhccccchhhhcCccEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 3455566666666 678999875443322 246665544322222 2345566777778899999976543
No 459
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=22.20 E-value=80 Score=21.00 Aligned_cols=16 Identities=6% Similarity=0.177 Sum_probs=12.7
Q ss_pred HHHHHHHHHHcCcEEEe
Q 033342 70 MQGYCSLARESSMWLSL 86 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~ 86 (121)
++.+.++|+++++ ++.
T Consensus 157 ~~~i~~l~~~~~~-li~ 172 (382)
T 4hvk_A 157 VEEISEVLAGKAA-LHI 172 (382)
T ss_dssp HHHHHHHHSSSSE-EEE
T ss_pred HHHHHHHHHHcCE-EEE
Confidence 5688899999988 653
No 460
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=22.16 E-value=87 Score=21.56 Aligned_cols=39 Identities=13% Similarity=0.199 Sum_probs=23.8
Q ss_pred ccEEEEEEecccc----CH---------HHHHHHHHHHHHHHHHCCCcEEEc
Q 033342 6 SVRVAVAQMTSIN----DL---------AANFATCSRLVKEAASAGAKLLCF 44 (121)
Q Consensus 6 ~~~ia~vQ~~~~~----~~---------~~n~~~~~~~~~~a~~~~~dlvv~ 44 (121)
.+|||++-+-.+. +. ..-.+.+.+.+.++.++|||+||.
T Consensus 162 gvkIgviG~t~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~Lk~~g~D~II~ 213 (341)
T 3gve_A 162 KVKVGYIGFVPPQIMTWDKKNLEGQVQVQDIVESANETIPKMKAEGADVIIA 213 (341)
T ss_dssp EEEEEEEEECCTTHHHHTHHHHTTTCEECCHHHHHHHHHHHHHHTTCSEEEE
T ss_pred CeEEEEEEeccCcccccccccccCceEEcCHHHHHHHHHHHHHhcCCCEEEE
Confidence 4789988765321 11 112455666666666788998764
No 461
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=22.14 E-value=1.1e+02 Score=20.84 Aligned_cols=17 Identities=6% Similarity=0.149 Sum_probs=14.3
Q ss_pred HHHHHHHHHHcCcEEEe
Q 033342 70 MQGYCSLARESSMWLSL 86 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~ 86 (121)
++.+.++|+++++.++.
T Consensus 155 l~~i~~l~~~~~~~li~ 171 (416)
T 3isl_A 155 LKAIGEACRTEDALFIV 171 (416)
T ss_dssp CHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCEEEE
Confidence 56789999999998875
No 462
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=22.11 E-value=74 Score=21.43 Aligned_cols=45 Identities=18% Similarity=0.104 Sum_probs=24.0
Q ss_pred CCCCcccEEEEEEeccc----cCHHHHHHHHHHHHHHHHHCCCcEEEcc
Q 033342 1 MAGAHSVRVAVAQMTSI----NDLAANFATCSRLVKEAASAGAKLLCFP 45 (121)
Q Consensus 1 ~~~~~~~~ia~vQ~~~~----~~~~~n~~~~~~~~~~a~~~~~dlvv~P 45 (121)
|+..++.-.|++...+. +....+.+.+.+..++..++|||+|=.-
T Consensus 1 ~~~~~~~imgilN~TpDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIG 49 (280)
T 1eye_A 1 MSPAPVQVMGVLNVTDDSFSDGGCYLDLDDAVKHGLAMAAAGAGIVDVG 49 (280)
T ss_dssp ----CCEEEEEEECSCCTTCSSCCCCSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCCCcEEEEEEeCCCCCcCCCcccCCHHHHHHHHHHHHHCCCCEEEEC
Confidence 45445555577765441 2222244566666666667899997554
No 463
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=22.05 E-value=67 Score=21.02 Aligned_cols=18 Identities=22% Similarity=0.338 Sum_probs=14.0
Q ss_pred eEEEEEEECCCCCEEeee
Q 033342 99 LCNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 99 ~~Ns~~~i~~~G~i~~~y 116 (121)
.+-+.++|+++|+++..+
T Consensus 181 ~~p~tflID~~G~I~~~~ 198 (254)
T 3tjj_A 181 TLRGLFIIDDKGILRQIT 198 (254)
T ss_dssp ECEEEEEECTTSBEEEEE
T ss_pred ccceEEEECCCCeEEEEE
Confidence 456789999999987654
No 464
>3i41_A Beta-hemolysin; beta toxin, sphingomyelinase, toxin; 1.75A {Staphylococcus aureus} PDB: 3i46_A 3i48_A 3i5v_A* 3k55_A
Probab=22.00 E-value=51 Score=22.08 Aligned_cols=14 Identities=21% Similarity=0.425 Sum_probs=11.9
Q ss_pred HCCCcEEEccCCcc
Q 033342 36 SAGAKLLCFPENFS 49 (121)
Q Consensus 36 ~~~~dlvv~PE~~~ 49 (121)
..++|||++.|.+.
T Consensus 63 ~~~pDIv~LQEv~~ 76 (317)
T 3i41_A 63 IKNNDVVIFNEAFD 76 (317)
T ss_dssp TSSCSEEEEEEECS
T ss_pred ccCCCEEEEEeecc
Confidence 37899999999964
No 465
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=21.98 E-value=64 Score=18.13 Aligned_cols=15 Identities=27% Similarity=0.175 Sum_probs=12.1
Q ss_pred EEEEEEECCCCCEEe
Q 033342 100 CNTHVLLDDAGNIRS 114 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~ 114 (121)
+-+.++++++|+++.
T Consensus 110 ~P~~~lid~~G~i~~ 124 (142)
T 3ewl_A 110 TPTIYLLDGRKRVIL 124 (142)
T ss_dssp SSEEEEECTTCBEEE
T ss_pred CCeEEEECCCCCEEe
Confidence 447899999999864
No 466
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=21.95 E-value=1.4e+02 Score=18.04 Aligned_cols=77 Identities=10% Similarity=0.089 Sum_probs=40.0
Q ss_pred ccEEEEEEeccccC---------------H----HHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccC--
Q 033342 6 SVRVAVAQMTSIND---------------L----AANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEP-- 64 (121)
Q Consensus 6 ~~~ia~vQ~~~~~~---------------~----~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~-- 64 (121)
..||++++...... . ..-.+.+.+.+++-.+.|+++|+. +..+ .... .+ .++..
T Consensus 21 nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~-~k~I-~d~a-~~--~l~k~gI 95 (159)
T 1ass_A 21 NAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLC-QKGI-DDVA-QH--YLAKEGI 95 (159)
T ss_dssp EEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEE-SSCB-CHHH-HH--HHHHTTC
T ss_pred CccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEEE-CCcc-CHHH-HH--HHHHCCC
Confidence 48999999775311 1 122334556666667889997654 3332 1110 00 01110
Q ss_pred --CCChHHHHHHHHHHHcCcEEEec
Q 033342 65 --LDGPIMQGYCSLARESSMWLSLG 87 (121)
Q Consensus 65 --~~~~~~~~l~~~a~~~~~~ii~G 87 (121)
...--..-+..+|+..|..++..
T Consensus 96 ~~v~~v~~~dleria~atGa~iv~~ 120 (159)
T 1ass_A 96 YAVRRVKKSDMEKLAKATGAKIVTD 120 (159)
T ss_dssp EEECSCCHHHHHHHHHHHTCCCBSS
T ss_pred EEEccCCHHHHHHHHHHhCCeeeCc
Confidence 12222455777788888777433
No 467
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=21.78 E-value=56 Score=23.58 Aligned_cols=21 Identities=14% Similarity=0.136 Sum_probs=18.3
Q ss_pred CChHHHHHHHHHHHcCcEEEe
Q 033342 66 DGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 66 ~~~~~~~l~~~a~~~~~~ii~ 86 (121)
+..+++.++++|+++++.+|+
T Consensus 239 ~~~fL~~lr~lc~~~g~lLI~ 259 (454)
T 4ao9_A 239 QPDFLQALRESATQVGALLVF 259 (454)
T ss_dssp CHHHHHHHHHHHHHHTCEEEE
T ss_pred chhhHHHHHHHHhhcCCEEEE
Confidence 457899999999999998864
No 468
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=21.76 E-value=80 Score=22.54 Aligned_cols=22 Identities=0% Similarity=-0.010 Sum_probs=18.5
Q ss_pred CCChHHHHHHHHHHHcCcEEEe
Q 033342 65 LDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 65 ~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
.+.++++.+.++|+++++.+++
T Consensus 239 ~~~~~L~~l~~lc~~~gillI~ 260 (476)
T 3i5t_A 239 PPAGYHARFKAICEKHDILYIS 260 (476)
T ss_dssp CCTTHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHcCCEEEE
Confidence 3567899999999999998864
No 469
>2ghi_A Transport protein; multidrug resistance protein, MDR, structural genomics, structural genomics consortium, SGC; 2.20A {Plasmodium yoelii yoelii str}
Probab=21.73 E-value=95 Score=20.31 Aligned_cols=65 Identities=15% Similarity=0.118 Sum_probs=31.2
Q ss_pred HHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEE
Q 033342 34 AASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIR 113 (121)
Q Consensus 34 a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~ 113 (121)
|...+++++++=|-+. +-+.. ....+.+.+.++.+ +..+++-+.... .- ...+..++++ +|+++
T Consensus 169 aL~~~p~lllLDEPts--~LD~~--------~~~~i~~~l~~l~~--~~tviivtH~~~--~~-~~~d~i~~l~-~G~i~ 232 (260)
T 2ghi_A 169 CLLKDPKIVIFDEATS--SLDSK--------TEYLFQKAVEDLRK--NRTLIIIAHRLS--TI-SSAESIILLN-KGKIV 232 (260)
T ss_dssp HHHHCCSEEEEECCCC--TTCHH--------HHHHHHHHHHHHTT--TSEEEEECSSGG--GS-TTCSEEEEEE-TTEEE
T ss_pred HHHcCCCEEEEECccc--cCCHH--------HHHHHHHHHHHhcC--CCEEEEEcCCHH--HH-HhCCEEEEEE-CCEEE
Confidence 3445678888877554 11110 11233444444432 445544433221 11 1256677775 78775
Q ss_pred e
Q 033342 114 S 114 (121)
Q Consensus 114 ~ 114 (121)
.
T Consensus 233 ~ 233 (260)
T 2ghi_A 233 E 233 (260)
T ss_dssp E
T ss_pred E
Confidence 3
No 470
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=21.73 E-value=69 Score=21.51 Aligned_cols=17 Identities=18% Similarity=0.384 Sum_probs=13.9
Q ss_pred HHHHHHHHHHcCcEEEe
Q 033342 70 MQGYCSLARESSMWLSL 86 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~ 86 (121)
++.+.++|+++++.++.
T Consensus 167 l~~i~~l~~~~~~~li~ 183 (393)
T 3kgw_A 167 LDGFGELCHRYQCLLLV 183 (393)
T ss_dssp CTTHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCEEEE
Confidence 45688999999998875
No 471
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=21.64 E-value=81 Score=22.21 Aligned_cols=21 Identities=5% Similarity=0.017 Sum_probs=18.0
Q ss_pred CChHHHHHHHHHHHcCcEEEe
Q 033342 66 DGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 66 ~~~~~~~l~~~a~~~~~~ii~ 86 (121)
+.++++.+.++|+++++.++.
T Consensus 240 ~~~~l~~l~~l~~~~~~llI~ 260 (460)
T 3gju_A 240 PAGYWEKIQAVLKKYDVLLVA 260 (460)
T ss_dssp CTTHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEE
Confidence 556799999999999998864
No 472
>1kvn_A SRP19; RNA binding protein; NMR {Archaeoglobus fulgidus} SCOP: d.201.1.1 PDB: 1kvv_A
Probab=21.56 E-value=1.2e+02 Score=17.17 Aligned_cols=46 Identities=9% Similarity=0.109 Sum_probs=28.6
Q ss_pred cEEEccCCccCCCCCCch--hhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 40 KLLCFPENFSYVGDKDAD--NIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 40 dlvv~PE~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
.+++||=++. ..-...+ -.......+.+..+.+.+.++..|....+
T Consensus 3 ~~vIyP~Y~D-s~~tr~eGRRv~k~~aV~nP~~~EI~~a~~~Lgl~~~v 50 (104)
T 1kvn_A 3 ESVVWTVNLD-SKKSRAEGRRIPRRFAVPNVKLHELVEASKELGLKFRA 50 (104)
T ss_dssp CEEEETTTTC-SSSCTTTTCCSCGGGCCSSCCHHHHHHHHHHHTSSEEE
T ss_pred eEEEeecccc-CCCChhhCCccCHHHhccCCCHHHHHHHHHHcCCCeEE
Confidence 4789998886 2211111 11112225778899999999998877754
No 473
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=21.56 E-value=45 Score=18.74 Aligned_cols=49 Identities=10% Similarity=-0.048 Sum_probs=28.6
Q ss_pred CCcEEEc-cCCcc-CCCCCCch--hhhcccCCCChHHHHHHHHHHHcCcEEEe
Q 033342 38 GAKLLCF-PENFS-YVGDKDAD--NIKIAEPLDGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 38 ~~dlvv~-PE~~~-~~~~~~~~--~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 86 (121)
++|+|+. |--.- -..|.... .........+.....+.+.|+++|++|+=
T Consensus 8 ~A~vvitNPth~AVAL~Yd~~~~~aP~VvAKG~~~~A~~I~~~A~e~gVPi~e 60 (97)
T 3t7y_A 8 HASAVVSAPKDIAVAIGYMPEKYKAPWIIAMGVNLRAKRIIAEAEKYGVPIMR 60 (97)
T ss_dssp GCSEEEEETTTEEEEEECCTTTCSSCEEEEEEEHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCEEEECCCcEEEEEEecCCCCCCCEEEEEeCcHHHHHHHHHHHHcCCeEEE
Confidence 5788876 54332 12333221 11111123567888999999999999864
No 474
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=21.51 E-value=74 Score=20.63 Aligned_cols=17 Identities=18% Similarity=0.180 Sum_probs=13.2
Q ss_pred EEEEEEECCCCCEEeee
Q 033342 100 CNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y 116 (121)
.=++++|+++|.|...+
T Consensus 137 ~p~tfvID~dG~I~~~~ 153 (224)
T 3keb_A 137 SPAIILADAANVVHYSE 153 (224)
T ss_dssp CCEEEEECTTCBEEEEE
T ss_pred cCEEEEEcCCCEEEEEE
Confidence 45789999999986543
No 475
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=21.47 E-value=2e+02 Score=19.63 Aligned_cols=26 Identities=12% Similarity=0.392 Sum_probs=22.3
Q ss_pred CHHHHHHHHHHHHHHHHHCCCcEEEc
Q 033342 19 DLAANFATCSRLVKEAASAGAKLLCF 44 (121)
Q Consensus 19 ~~~~n~~~~~~~~~~a~~~~~dlvv~ 44 (121)
..+..++.+.+.++.+.+.|+++|++
T Consensus 89 ~r~~~i~~~~~~i~~a~~lG~~~v~~ 114 (367)
T 1tz9_A 89 QRDHYIDNYRQTLRNLGKCGISLVCY 114 (367)
T ss_dssp THHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 45677888899999999999999988
No 476
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=21.46 E-value=1.4e+02 Score=19.58 Aligned_cols=17 Identities=12% Similarity=0.034 Sum_probs=14.3
Q ss_pred HHHHHHHHHHcCcEEEe
Q 033342 70 MQGYCSLARESSMWLSL 86 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~ 86 (121)
++.+.++|+++++.++.
T Consensus 150 l~~i~~l~~~~~~~li~ 166 (366)
T 1m32_A 150 IDEVGALAHRYGKTYIV 166 (366)
T ss_dssp HHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHcCCEEEE
Confidence 57899999999988864
No 477
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=21.44 E-value=1.9e+02 Score=19.35 Aligned_cols=60 Identities=12% Similarity=-0.020 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHH-HCCCc--EEEccCCccCCCCC--CchhhhcccCCCChHHHHHHHHHHHcCcEEEecc
Q 033342 24 FATCSRLVKEAA-SAGAK--LLCFPENFSYVGDK--DADNIKIAEPLDGPIMQGYCSLARESSMWLSLGG 88 (121)
Q Consensus 24 ~~~~~~~~~~a~-~~~~d--lvv~PE~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~G~ 88 (121)
+..+...+++.. ..+++ +||.=-........ ..+.. .-..+...|..+|+++++++++-+
T Consensus 164 ~~~i~~~i~~l~~~~~~~~~lVVID~l~~l~~~~~~~~r~~-----~i~~~~~~Lk~lAk~~~i~vi~ls 228 (315)
T 3bh0_A 164 VNYIWSKTRQTKRKNPGKRVIVMIDYLQLLEPAKANDSRTN-----QISQISRDLKKMARELDVVVIALS 228 (315)
T ss_dssp HHHHHHHHHHHHHTSSSCCEEEEEECGGGSBCSCTTSCHHH-----HHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCeEEEEeCchhcCCCCCCCCHHH-----HHHHHHHHHHHHHHHhCCeEEEEe
Confidence 444555555443 34788 88876655411110 00000 012456778999999999887653
No 478
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=21.41 E-value=75 Score=22.22 Aligned_cols=21 Identities=10% Similarity=0.031 Sum_probs=17.7
Q ss_pred CChHHHHHHHHHHHcCcEEEe
Q 033342 66 DGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 66 ~~~~~~~l~~~a~~~~~~ii~ 86 (121)
+.++++.+.++|+++++.++.
T Consensus 234 ~~~~l~~l~~l~~~~~~llI~ 254 (452)
T 3n5m_A 234 PQDYMKAVHETCQKHGALLIS 254 (452)
T ss_dssp CTTHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEE
Confidence 456789999999999998863
No 479
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=21.39 E-value=77 Score=18.05 Aligned_cols=18 Identities=11% Similarity=0.302 Sum_probs=12.3
Q ss_pred HHHHHHHCCCcEEEccCC
Q 033342 30 LVKEAASAGAKLLCFPEN 47 (121)
Q Consensus 30 ~~~~a~~~~~dlvv~PE~ 47 (121)
+++.|.+.++|+||..-.
T Consensus 101 I~~~a~~~~~dliV~G~~ 118 (150)
T 3tnj_A 101 IIRIAEQENVDLIVVGSH 118 (150)
T ss_dssp HHHHHHHTTCSEEEEEEC
T ss_pred HHHHHHHcCCCEEEEecC
Confidence 334455678999998753
No 480
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=21.36 E-value=83 Score=22.03 Aligned_cols=21 Identities=10% Similarity=0.142 Sum_probs=17.8
Q ss_pred CChHHHHHHHHHHHcCcEEEe
Q 033342 66 DGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 66 ~~~~~~~l~~~a~~~~~~ii~ 86 (121)
+.++++.+.++|+++++.++.
T Consensus 230 ~~~~l~~l~~l~~~~~~~lI~ 250 (448)
T 3dod_A 230 PEGYLAGVRELCTTYDVLMIV 250 (448)
T ss_dssp CTTHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHHhCCEEEE
Confidence 456789999999999998864
No 481
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=21.35 E-value=83 Score=22.15 Aligned_cols=21 Identities=10% Similarity=0.063 Sum_probs=18.1
Q ss_pred CChHHHHHHHHHHHcCcEEEe
Q 033342 66 DGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 66 ~~~~~~~l~~~a~~~~~~ii~ 86 (121)
+.++++.+.++|+++++.++.
T Consensus 238 ~~~~l~~l~~l~~~~~~llI~ 258 (459)
T 4a6r_A 238 PATYWPEIERICRKYDVLLVA 258 (459)
T ss_dssp CTTHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEE
Confidence 567789999999999998874
No 482
>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}
Probab=21.34 E-value=1.2e+02 Score=17.13 Aligned_cols=43 Identities=7% Similarity=-0.026 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHcCcEEEeccceeecCCCCceEEEEEEECCCCCEEeee
Q 033342 69 IMQGYCSLARESSMWLSLGGFQEKGSDDARLCNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 69 ~~~~l~~~a~~~~~~ii~G~~~~~~~~~~~~~Ns~~~i~~~G~i~~~y 116 (121)
-++.+.+.+++.|+.++ +-... . .++ ...+++.+|+|..+..+
T Consensus 97 dld~~~~~l~~~G~~~~-~~~~~-~-~~~--~~~~~~~DPdG~~iel~ 139 (141)
T 3ghj_A 97 EIEPLKKALESKGVSVH-GPVNQ-E-WMQ--AVSLYFADPNGHALEFT 139 (141)
T ss_dssp GHHHHHHHHHHTTCCCE-EEEEE-G-GGT--EEEEEEECTTCCEEEEE
T ss_pred HHHHHHHHHHHCCCeEe-CCccc-C-CCC--ceEEEEECCCCCEEEEE
Confidence 45666666777888775 31222 1 111 24678899999887654
No 483
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=21.31 E-value=2.1e+02 Score=19.72 Aligned_cols=21 Identities=10% Similarity=0.120 Sum_probs=17.9
Q ss_pred CChHHHHHHHHHHHcCcEEEe
Q 033342 66 DGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 66 ~~~~~~~l~~~a~~~~~~ii~ 86 (121)
+.++++.+.++|+++++.+++
T Consensus 221 ~~~~l~~l~~l~~~~~illI~ 241 (434)
T 3l44_A 221 KPGFLEKVNELVHEAGALVIY 241 (434)
T ss_dssp CTTHHHHHHHHHHTTTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEE
Confidence 556789999999999998864
No 484
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=21.25 E-value=1.3e+02 Score=20.61 Aligned_cols=21 Identities=14% Similarity=0.264 Sum_probs=14.5
Q ss_pred HHHHHHHHCCCcEEEccCCcc
Q 033342 29 RLVKEAASAGAKLLCFPENFS 49 (121)
Q Consensus 29 ~~~~~a~~~~~dlvv~PE~~~ 49 (121)
+.++...+.|+|.|.+.+.+.
T Consensus 191 ~~~~~~~~aGad~i~i~d~~~ 211 (354)
T 3cyv_A 191 LYLNAQIKAGAQAVMIFDTWG 211 (354)
T ss_dssp HHHHHHHHTTCSEEEEECTTG
T ss_pred HHHHHHHHhCCCEEEEeCCcc
Confidence 334444567999998888664
No 485
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=21.24 E-value=1.5e+02 Score=17.94 Aligned_cols=76 Identities=12% Similarity=0.036 Sum_probs=38.0
Q ss_pred EEEEEEeccc-------cCHHHHHHHHHHHHHHHHHCC---------CcEEEccCCccCCCCCCch-hhh-c--ccCCCC
Q 033342 8 RVAVAQMTSI-------NDLAANFATCSRLVKEAASAG---------AKLLCFPENFSYVGDKDAD-NIK-I--AEPLDG 67 (121)
Q Consensus 8 ~ia~vQ~~~~-------~~~~~n~~~~~~~~~~a~~~~---------~dlvv~PE~~~~~~~~~~~-~~~-~--~~~~~~ 67 (121)
.+.+++.-.. .+.+.-.+.+.++++++.+.+ +.+++.-- ...+..... +.. + ......
T Consensus 85 d~vvi~~G~ND~~~~~~~~~~~~~~~l~~li~~~~~~~~~~~~~~P~~~iil~~~--p~~~~~~~~~~~~~~~~~~~~~~ 162 (216)
T 2q0q_A 85 DLVIIMLGTNDTKAYFRRTPLDIALGMSVLVTQVLTSAGGVGTTYPAPKVLVVSP--PPLAPMPHPWFQLIFEGGEQKTT 162 (216)
T ss_dssp SEEEEECCTGGGSGGGCCCHHHHHHHHHHHHHHHHTCTTTTTBCCCCCEEEEEEC--CCCCCCCSHHHHHHTTTHHHHHT
T ss_pred CEEEEEecCcccchhcCCCHHHHHHHHHHHHHHHHHhcccccccCCCCeEEEEeC--CCcCcccCCcchhhhccHHHHHH
Confidence 5566665321 244555566666666666656 77777611 101110010 000 0 001123
Q ss_pred hHHHHHHHHHHHcCcEEE
Q 033342 68 PIMQGYCSLARESSMWLS 85 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii 85 (121)
.+-+.+.++|+++++.++
T Consensus 163 ~~n~~~~~~a~~~~v~~i 180 (216)
T 2q0q_A 163 ELARVYSALASFMKVPFF 180 (216)
T ss_dssp THHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHcCCcEE
Confidence 566778889999887663
No 486
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=21.24 E-value=17 Score=25.10 Aligned_cols=32 Identities=19% Similarity=0.007 Sum_probs=19.6
Q ss_pred ccCHHHHHHHHHHHHHHHHHCCCcEEEccCCc
Q 033342 17 INDLAANFATCSRLVKEAASAGAKLLCFPENF 48 (121)
Q Consensus 17 ~~~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~ 48 (121)
..|.+.--+.+.+-++.+.+.|+|+|..|+..
T Consensus 86 ~EDl~~YPRtle~D~~ll~~~GvD~vF~P~~~ 117 (314)
T 3inn_A 86 NEDLGRYPRDLERDAGLLHDAQVDYLFAPTVS 117 (314)
T ss_dssp TSSTTTCCCCHHHHHHHHHHTTCSEEECCCHH
T ss_pred CccccccCCCHHHHHHHHHhCCCCEEECCCHH
Confidence 34443333344445555567799999999864
No 487
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=21.15 E-value=1.1e+02 Score=20.45 Aligned_cols=31 Identities=13% Similarity=0.069 Sum_probs=23.9
Q ss_pred cCHHHHHHHHHHHHHHHHHCCCcEEEccCCc
Q 033342 18 NDLAANFATCSRLVKEAASAGAKLLCFPENF 48 (121)
Q Consensus 18 ~~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~ 48 (121)
.+.++-.+.+.+.++...+.|+|+||.+=..
T Consensus 66 ks~e~i~~~~~~~~~~L~~~g~d~IVIACNT 96 (274)
T 3uhf_A 66 KDKDTIIKFCLEALDFFEQFQIDMLIIACNT 96 (274)
T ss_dssp SCHHHHHHHHHHHHHHHTTSCCSEEEECCHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3567777778888877778899999998444
No 488
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=21.12 E-value=93 Score=17.10 Aligned_cols=17 Identities=35% Similarity=0.333 Sum_probs=12.0
Q ss_pred EEEEEEECCCCCEEeee
Q 033342 100 CNTHVLLDDAGNIRSTY 116 (121)
Q Consensus 100 ~Ns~~~i~~~G~i~~~y 116 (121)
+=+.++++++|+++..+
T Consensus 83 ~Pt~~~~~~~G~~~~~~ 99 (126)
T 2l57_A 83 VPTTVFLDKEGNKFYVH 99 (126)
T ss_dssp SSEEEEECTTCCEEEEE
T ss_pred eeEEEEECCCCCEEEEe
Confidence 34677888889876654
No 489
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=21.08 E-value=1.4e+02 Score=19.61 Aligned_cols=32 Identities=9% Similarity=-0.005 Sum_probs=24.4
Q ss_pred cCHHHHHHHHHHHHHHHHHCCCcEEEccCCcc
Q 033342 18 NDLAANFATCSRLVKEAASAGAKLLCFPENFS 49 (121)
Q Consensus 18 ~~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~ 49 (121)
.+.++..+.+.+.++...+.|+|.||.+=.+.
T Consensus 45 ~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTa 76 (267)
T 2gzm_A 45 RSREEVRQFTWEMTEHLLDLNIKMLVIACNTA 76 (267)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCSEEEECCHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchh
Confidence 45677778888888888788999999874443
No 490
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=21.07 E-value=80 Score=17.76 Aligned_cols=18 Identities=22% Similarity=0.244 Sum_probs=12.5
Q ss_pred HHHHHHHCCCcEEEccCC
Q 033342 30 LVKEAASAGAKLLCFPEN 47 (121)
Q Consensus 30 ~~~~a~~~~~dlvv~PE~ 47 (121)
+++.|.+.++|+||..-.
T Consensus 98 I~~~a~~~~~dliV~G~~ 115 (143)
T 3fdx_A 98 ILALAKSLPADLVIIASH 115 (143)
T ss_dssp HHHHHHHTTCSEEEEESS
T ss_pred HHHHHHHhCCCEEEEeCC
Confidence 334455678999998764
No 491
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=21.02 E-value=1.5e+02 Score=19.76 Aligned_cols=17 Identities=0% Similarity=0.282 Sum_probs=14.1
Q ss_pred HHHHHHHHHHc--CcEEEe
Q 033342 70 MQGYCSLARES--SMWLSL 86 (121)
Q Consensus 70 ~~~l~~~a~~~--~~~ii~ 86 (121)
++.+.++|+++ ++.++.
T Consensus 156 l~~i~~~~~~~~~~~~li~ 174 (385)
T 2bkw_A 156 LKAISQAIKQTSPETFFVV 174 (385)
T ss_dssp HHHHHHHHHHHCTTSEEEE
T ss_pred HHHHHHHHHhhCCCCEEEE
Confidence 56889999999 888865
No 492
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=21.01 E-value=61 Score=20.61 Aligned_cols=19 Identities=11% Similarity=-0.085 Sum_probs=15.9
Q ss_pred HHHHHHHHcCcEEEeccce
Q 033342 72 GYCSLARESSMWLSLGGFQ 90 (121)
Q Consensus 72 ~l~~~a~~~~~~ii~G~~~ 90 (121)
.+.++++++++.+++||-.
T Consensus 151 ~il~l~k~~g~~ivisSDA 169 (212)
T 1v77_A 151 KAWKLVEKYKVRRFLTSSA 169 (212)
T ss_dssp HHHHHHHHHTCCEEEECCC
T ss_pred HHHHHHHhcCCCEEEeCCC
Confidence 5778899999999999743
No 493
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=21.00 E-value=2e+02 Score=19.41 Aligned_cols=17 Identities=18% Similarity=0.163 Sum_probs=13.5
Q ss_pred HHHHHHHHHHcCcEEEe
Q 033342 70 MQGYCSLARESSMWLSL 86 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~ 86 (121)
++.+.++|+++++.++.
T Consensus 192 ~~~l~~~~~~~~~~li~ 208 (398)
T 3a2b_A 192 LPELTSIANEFDAAVMV 208 (398)
T ss_dssp HHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHcCcEEEE
Confidence 67888888888887764
No 494
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=20.97 E-value=2e+02 Score=19.58 Aligned_cols=19 Identities=11% Similarity=0.167 Sum_probs=15.5
Q ss_pred hHHHHHHHHHHHcCcEEEe
Q 033342 68 PIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 68 ~~~~~l~~~a~~~~~~ii~ 86 (121)
+.++.+.++|+++++.++.
T Consensus 183 ~~l~~l~~~~~~~~~~li~ 201 (400)
T 3asa_A 183 DQLRAIVHYAIEHEILILF 201 (400)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHcCCEEEE
Confidence 4577889999999998864
No 495
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=20.96 E-value=1e+02 Score=23.41 Aligned_cols=17 Identities=12% Similarity=0.053 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHcCcEEE
Q 033342 69 IMQGYCSLARESSMWLS 85 (121)
Q Consensus 69 ~~~~l~~~a~~~~~~ii 85 (121)
-+..+.++|.++++.|+
T Consensus 217 eV~~iv~~A~~~~ipVv 233 (658)
T 4bby_A 217 DVVKIVNLACKYNLCII 233 (658)
T ss_dssp HHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHCCCeEE
Confidence 46778889999999885
No 496
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=20.93 E-value=1.6e+02 Score=20.23 Aligned_cols=17 Identities=24% Similarity=0.427 Sum_probs=14.4
Q ss_pred HHHHHHHHHHcCcEEEe
Q 033342 70 MQGYCSLARESSMWLSL 86 (121)
Q Consensus 70 ~~~l~~~a~~~~~~ii~ 86 (121)
++.+.++|+++++.++.
T Consensus 159 l~~i~~l~~~~~~~li~ 175 (412)
T 2cb1_A 159 LEALATLAEEAGVALVV 175 (412)
T ss_dssp HHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHcCCEEEE
Confidence 67889999999988864
No 497
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=20.83 E-value=86 Score=22.37 Aligned_cols=21 Identities=5% Similarity=-0.007 Sum_probs=18.2
Q ss_pred CChHHHHHHHHHHHcCcEEEe
Q 033342 66 DGPIMQGYCSLARESSMWLSL 86 (121)
Q Consensus 66 ~~~~~~~l~~~a~~~~~~ii~ 86 (121)
+.++++.+.++|+++++.+++
T Consensus 242 ~~~~l~~l~~l~~~~gillI~ 262 (472)
T 3hmu_A 242 PDSYWPEIQRICDKYDILLIA 262 (472)
T ss_dssp CTTHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEE
Confidence 567899999999999998874
No 498
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=20.82 E-value=78 Score=18.38 Aligned_cols=17 Identities=18% Similarity=0.223 Sum_probs=11.3
Q ss_pred HHHHHCCCcEEEccCCc
Q 033342 32 KEAASAGAKLLCFPENF 48 (121)
Q Consensus 32 ~~a~~~~~dlvv~PE~~ 48 (121)
+.|.+.++|+||..-.-
T Consensus 114 ~~a~~~~~dlIV~G~~g 130 (162)
T 1mjh_A 114 KIAEDEGVDIIIMGSHG 130 (162)
T ss_dssp HHHHHTTCSEEEEESCC
T ss_pred HHHHHcCCCEEEEcCCC
Confidence 33445689999987543
No 499
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=20.67 E-value=1.7e+02 Score=18.53 Aligned_cols=56 Identities=7% Similarity=0.056 Sum_probs=33.4
Q ss_pred cEEEEEEeccccCHHHHHHHHHHHHHHHHHCCCcEEEccCCccCCCCCCchhhhcccCCCChHHHHHHHHHHHcCcEEE
Q 033342 7 VRVAVAQMTSINDLAANFATCSRLVKEAASAGAKLLCFPENFSYVGDKDADNIKIAEPLDGPIMQGYCSLARESSMWLS 85 (121)
Q Consensus 7 ~~ia~vQ~~~~~~~~~n~~~~~~~~~~a~~~~~dlvv~PE~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii 85 (121)
+++..+...... ..+.+.+.++.|..-|++.|+++- + .+..+.+.+.|+++|+.+.
T Consensus 77 l~i~~~~~~~~~----~~~~~~~~i~~A~~lGa~~v~~~~-----~--------------~~~~~~l~~~a~~~gv~l~ 132 (262)
T 3p6l_A 77 IKIVGTGVYVAE----KSSDWEKMFKFAKAMDLEFITCEP-----A--------------LSDWDLVEKLSKQYNIKIS 132 (262)
T ss_dssp CEEEEEEEECCS----STTHHHHHHHHHHHTTCSEEEECC-----C--------------GGGHHHHHHHHHHHTCEEE
T ss_pred CeEEEEeccCCc----cHHHHHHHHHHHHHcCCCEEEecC-----C--------------HHHHHHHHHHHHHhCCEEE
Confidence 455555443321 234566677777778888877751 1 0234567778888887663
No 500
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=20.59 E-value=1.3e+02 Score=19.94 Aligned_cols=17 Identities=0% Similarity=0.227 Sum_probs=13.9
Q ss_pred HHHHHHHHHHcC--cEEEe
Q 033342 70 MQGYCSLARESS--MWLSL 86 (121)
Q Consensus 70 ~~~l~~~a~~~~--~~ii~ 86 (121)
++.+.++|++++ +.++.
T Consensus 158 ~~~i~~l~~~~~~~~~li~ 176 (384)
T 1eg5_A 158 VEDVTRIVKKKNKETLVHV 176 (384)
T ss_dssp HHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHhcCCceEEEE
Confidence 578899999999 87764
Done!