Query 033343
Match_columns 121
No_of_seqs 95 out of 97
Neff 6.0
Searched_HMMs 13730
Date Mon Mar 25 21:17:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033343.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/033343hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1urua_ a.238.1.1 (A:) Amphiph 98.9 8E-09 5.9E-13 73.6 12.2 108 2-118 104-213 (217)
2 d1i4da_ a.238.1.2 (A:) Arfapti 98.7 1.2E-07 8.5E-12 66.6 11.8 97 2-107 101-199 (200)
3 d2d4ca1 a.238.1.1 (A:11-247) E 97.3 0.0013 9.1E-08 46.5 10.3 62 52-114 174-235 (237)
4 d2efla1 a.238.1.4 (A:1-288) Fo 95.0 0.22 1.6E-05 34.9 11.4 72 46-117 188-260 (288)
5 d1y2oa1 a.238.1.3 (A:1-248) BA 94.8 0.32 2.3E-05 34.3 11.9 68 52-119 165-232 (248)
6 d2elba1 a.238.1.1 (A:6-273) DC 94.5 0.21 1.5E-05 35.5 10.3 59 48-106 155-213 (268)
7 d2efka1 a.238.1.4 (A:10-288) C 86.8 3.4 0.00025 28.2 12.2 78 39-116 158-250 (279)
8 d1fxka_ a.2.5.1 (A:) Prefoldin 42.4 28 0.002 21.0 5.3 32 39-70 72-103 (107)
9 d2etda1 a.29.9.1 (A:35-183) Hy 39.6 24 0.0017 22.6 4.8 38 39-76 91-128 (149)
10 d2efla1 a.238.1.4 (A:1-288) Fo 39.2 48 0.0035 21.9 11.7 52 37-88 165-216 (288)
11 d1xppa_ d.74.3.2 (A:) DNA-dire 34.8 42 0.0031 20.0 5.5 31 49-79 68-98 (99)
12 d1fxkc_ a.2.5.1 (C:) Prefoldin 26.2 66 0.0048 19.5 5.8 27 39-65 95-121 (133)
13 d1asha_ a.1.1.2 (A:) Ascaris h 25.4 19 0.0014 22.9 2.3 35 81-115 109-143 (147)
14 d2g7oa1 a.241.1.1 (A:60-127) T 23.4 27 0.002 20.0 2.4 14 63-76 48-61 (68)
15 d1itka1 a.93.1.3 (A:18-423) Ca 22.3 43 0.0031 25.4 4.1 30 82-111 362-391 (406)
16 d1r8ia_ a.8.7.1 (A:) Typo IV s 22.2 67 0.0049 20.7 4.8 30 38-67 7-36 (187)
17 d1mwva1 a.93.1.3 (A:35-440) Ca 21.8 45 0.0033 25.4 4.1 31 81-111 361-391 (406)
No 1
>d1urua_ a.238.1.1 (A:) Amphiphysin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.94 E-value=8e-09 Score=73.60 Aligned_cols=108 Identities=12% Similarity=0.163 Sum_probs=86.4
Q ss_pred hhHHHHHHhHHHHHHHH--HHHHHHHhhhcccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 033343 2 LAVRSAFTDRSSALLTM--RAEKLEAASSKIFGGDKSRIRKIEELKETIRVTEDAKSVAINEYERIKENNRTELERLDKE 79 (121)
Q Consensus 2 ~aVk~a~~dR~~al~~~--~~~~le~~~skl~G~~~~r~~Ki~~l~~eI~~~e~~~e~a~~eye~i~~~~~~EieRF~~e 79 (121)
++|+.++..|.++++.| ...+++....+--.+. ...+ +..++..++.|+..|+.+...+..||.+|...
T Consensus 104 ~~~~~~~kkr~~~~~dyd~~~~~l~k~~~k~~~~~--~~~~-------l~~~e~~~~~a~~~fe~~~~~l~~el~~~~~~ 174 (217)
T d1urua_ 104 PEMKKKVEKRNRKLIDYDGQRHSFQNLQANANKRK--DDVK-------LTKGREQLEEARRTYEILNTELHDELPALYDS 174 (217)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCBTT--BCCT-------TTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc--chhh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999 3455554333322110 1112 44455667889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhc
Q 033343 80 RRADFLNMLKGFVVNQVGYAEKIANVWAKVAEETSGYAN 118 (121)
Q Consensus 80 r~~D~~~ml~~f~~~Q~~~~~~~~~~W~~~~~e~~~~~~ 118 (121)
|..+|...|..|+..|..++..+.++|+.+.|.+...+.
T Consensus 175 ~~~~~~~~l~~~~~~q~~~~~~~~~~~~~l~~~~~~l~~ 213 (217)
T d1urua_ 175 RILFLVTNLQTLFATEQVFHNETAKIYSELEAIVDKLAT 213 (217)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 999999999999999999999999999999998876654
No 2
>d1i4da_ a.238.1.2 (A:) Arfaptin, Rac-binding fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.71 E-value=1.2e-07 Score=66.57 Aligned_cols=97 Identities=12% Similarity=0.090 Sum_probs=70.6
Q ss_pred hhHHHHHHhHHHHHHHH--HHHHHHHhhhcccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 033343 2 LAVRSAFTDRSSALLTM--RAEKLEAASSKIFGGDKSRIRKIEELKETIRVTEDAKSVAINEYERIKENNRTELERLDKE 79 (121)
Q Consensus 2 ~aVk~a~~dR~~al~~~--~~~~le~~~skl~G~~~~r~~Ki~~l~~eI~~~e~~~e~a~~eye~i~~~~~~EieRF~~e 79 (121)
+.|+.++..|.++...+ ...+++..+.+ .+-..-...+..++..++.++..|+.++.....+|.+|+..
T Consensus 101 ~~~~~~~kk~~~~~~dyd~~~~k~~~~~~~---------~~~~~~~~kl~~ae~~~~~a~~~fe~~~~~~~~~l~~l~~~ 171 (200)
T d1i4da_ 101 EDTLMTVKQYEAARLEYDAYRTDLEELSLG---------PRDAGTRGRLESAQATFQAHRDKYEKLRGDVAIKLKFLEEN 171 (200)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC---------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhhc---------ccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34666667777766666 23444432211 11112223567778888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 033343 80 RRADFLNMLKGFVVNQVGYAEKIANVWA 107 (121)
Q Consensus 80 r~~D~~~ml~~f~~~Q~~~~~~~~~~W~ 107 (121)
|..||...|..|+..|..|++.+.+.|+
T Consensus 172 r~~~~~~~l~~~~~~~~~f~~~~~~~le 199 (200)
T d1i4da_ 172 KIKVMHKQLLLFHNAVSAYFAGNQKQLE 199 (200)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999985
No 3
>d2d4ca1 a.238.1.1 (A:11-247) Endophilin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.30 E-value=0.0013 Score=46.49 Aligned_cols=62 Identities=15% Similarity=0.256 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 033343 52 EDAKSVAINEYERIKENNRTELERLDKERRADFLNMLKGFVVNQVGYAEKIANVWAKVAEETS 114 (121)
Q Consensus 52 e~~~e~a~~eye~i~~~~~~EieRF~~er~~D~~~ml~~f~~~Q~~~~~~~~~~W~~~~~e~~ 114 (121)
+..++.|+..|+...+....+|..|.. +..++..-|..|+..|..|++.+.++++.+.|.+.
T Consensus 174 ~e~l~~a~~~~e~~~~~~~~~l~~l~~-~~~~~~~~l~~~~~aq~~y~~~~~~~l~~l~~~l~ 235 (237)
T d2d4ca1 174 DEELRQALEKFDESKEIAESSMFNLLE-MDIEQVSQLSALVQAQLEYHKQAVQILQQVTVRLE 235 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456778999999999999999999975 56889999999999999999999999999999875
No 4
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.98 E-value=0.22 Score=34.86 Aligned_cols=72 Identities=8% Similarity=0.067 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Q 033343 46 ETIRVTEDAKSVAINE-YERIKENNRTELERLDKERRADFLNMLKGFVVNQVGYAEKIANVWAKVAEETSGYA 117 (121)
Q Consensus 46 ~eI~~~e~~~e~a~~e-ye~i~~~~~~EieRF~~er~~D~~~ml~~f~~~Q~~~~~~~~~~W~~~~~e~~~~~ 117 (121)
.++...-.....++.+ |+.-...+...+++|+.+|..-|+.+|..|+.....+...+......+...+..+-
T Consensus 188 ~~Y~~~v~~~n~~~~~~~~~~~~~~~~~~q~~e~~r~~~~k~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~id 260 (288)
T d2efla1 188 ADYSSILQKFNHEQHEYYHTHIPNIFQKIQEMEERRIVRMGESMKTYAEVDRQVIPIIGKCLDGIVKAAESID 260 (288)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHCC
Confidence 3333333333334334 23334456677888999999999999999999999999999999998888777653
No 5
>d1y2oa1 a.238.1.3 (A:1-248) BAP2/IRSp53 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.81 E-value=0.32 Score=34.28 Aligned_cols=68 Identities=15% Similarity=0.036 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhcc
Q 033343 52 EDAKSVAINEYERIKENNRTELERLDKERRADFLNMLKGFVVNQVGYAEKIANVWAKVAEETSGYANE 119 (121)
Q Consensus 52 e~~~e~a~~eye~i~~~~~~EieRF~~er~~D~~~ml~~f~~~Q~~~~~~~~~~W~~~~~e~~~~~~~ 119 (121)
....+.++..|+.+......+..-..+.|-..|.+.|..|+..|..|+.++..+-..+.|.++.-+.+
T Consensus 165 ~e~~~~~~~~~~~~l~~~~~~~~~eerkr~~~lv~~l~~~~~a~~~~~~q~~~~l~~~~~~~~~~~~~ 232 (248)
T d1y2oa1 165 IDAISNKQGELENYVSDGYKTALTEERRRFCFLVEKQCAVAKNSAAYHSKGKELLAQKLPLWQQACAD 232 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhh
Confidence 34455677788888888888888888888888899999999999999999999999999988765443
No 6
>d2elba1 a.238.1.1 (A:6-273) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.52 E-value=0.21 Score=35.54 Aligned_cols=59 Identities=10% Similarity=0.116 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 033343 48 IRVTEDAKSVAINEYERIKENNRTELERLDKERRADFLNMLKGFVVNQVGYAEKIANVW 106 (121)
Q Consensus 48 I~~~e~~~e~a~~eye~i~~~~~~EieRF~~er~~D~~~ml~~f~~~Q~~~~~~~~~~W 106 (121)
+.+++..+..+++.|+...-....-|..++..|..++...|.+|+..|..+..++....
T Consensus 155 ~~Ea~~~l~~~r~~f~~~~~d~~~~l~~l~~~k~~~~l~~l~~~~~a~~~ff~~~~~~l 213 (268)
T d2elba1 155 KYEVTEDVYTSRKKQHQTMMHYFCALNTLQYKKKIALLEPLLGYMQAQISFFKMGSENL 213 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45567778889999999999999999999999999999999999999999998887654
No 7
>d2efka1 a.238.1.4 (A:10-288) CDC42-interacting protein 4, CIP4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.78 E-value=3.4 Score=28.25 Aligned_cols=78 Identities=13% Similarity=0.118 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 033343 39 RKIEELKETIRVTEDAKSVAINEYER---------------IKENNRTELERLDKERRADFLNMLKGFVVNQVGYAEKIA 103 (121)
Q Consensus 39 ~Ki~~l~~eI~~~e~~~e~a~~eye~---------------i~~~~~~EieRF~~er~~D~~~ml~~f~~~Q~~~~~~~~ 103 (121)
.++..+..........++.+..+|.. -...+..-++.++.+|...|+.+|..|+.....+...+.
T Consensus 158 ~~~~K~~~~~~~~~~~~~~~~~~y~~~l~~~n~~~~~~~~~~~p~~l~~lq~~e~~r~~~lk~~l~~~~~~~~~~~~~~~ 237 (279)
T d2efka1 158 ADVEKAKQQAHLRSHMAEESKNEYAAQLQRFNRDQAHFYFSQMPQIFDKLQDMDERRATRLGAGYGLLSEAELEVVPIIA 237 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 34444555555555555555555533 334445567777899999999999999999988888877
Q ss_pred HHHHHHHHHhcch
Q 033343 104 NVWAKVAEETSGY 116 (121)
Q Consensus 104 ~~W~~~~~e~~~~ 116 (121)
..=..+...+..+
T Consensus 238 ~~~~~l~~~~~~i 250 (279)
T d2efka1 238 KCLEGMKVAANAV 250 (279)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHC
Confidence 7777776666554
No 8
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=42.36 E-value=28 Score=20.96 Aligned_cols=32 Identities=16% Similarity=0.268 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 033343 39 RKIEELKETIRVTEDAKSVAINEYERIKENNR 70 (121)
Q Consensus 39 ~Ki~~l~~eI~~~e~~~e~a~~eye~i~~~~~ 70 (121)
.+++.++.+|..++......+.+|+++.+.++
T Consensus 72 ~~~e~l~~~i~~l~~q~~~l~~~l~~~~~~l~ 103 (107)
T d1fxka_ 72 EKLETLQLREKTIERQEERVMKKLQEMQVNIQ 103 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47777777777777777777777777776654
No 9
>d2etda1 a.29.9.1 (A:35-183) Hypothetical protein TM0961 {Thermotoga maritima [TaxId: 2336]}
Probab=39.56 E-value=24 Score=22.60 Aligned_cols=38 Identities=18% Similarity=0.345 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 033343 39 RKIEELKETIRVTEDAKSVAINEYERIKENNRTELERL 76 (121)
Q Consensus 39 ~Ki~~l~~eI~~~e~~~e~a~~eye~i~~~~~~EieRF 76 (121)
.....|..+|..+|..+..+++.|...+..-+.-|..|
T Consensus 91 ~~~~~l~~~l~~~E~~Ia~aR~~YN~~V~~yN~~i~~F 128 (149)
T d2etda1 91 ANFRQLMDELAGTENRIAVARRDYNEAVKKYNTAIKKF 128 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 56778889999999999999999998888777766655
No 10
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.16 E-value=48 Score=21.93 Aligned_cols=52 Identities=8% Similarity=0.172 Sum_probs=36.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 033343 37 RIRKIEELKETIRVTEDAKSVAINEYERIKENNRTELERLDKERRADFLNML 88 (121)
Q Consensus 37 r~~Ki~~l~~eI~~~e~~~e~a~~eye~i~~~~~~EieRF~~er~~D~~~ml 88 (121)
...++..+..........++.|..+|...+........+|-...-..+...|
T Consensus 165 ~~~~~~K~~~k~~~~~~~~~~a~~~Y~~~v~~~n~~~~~~~~~~~~~~~~~~ 216 (288)
T d2efla1 165 TKADVEKARQQAQIRHQMAEDSKADYSSILQKFNHEQHEYYHTHIPNIFQKI 216 (288)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456777777888888888889999988888887777776544333333333
No 11
>d1xppa_ d.74.3.2 (A:) DNA-directed RNA polymerase subunit L, RpoL {Thermoplasma acidophilum [TaxId: 2303]}
Probab=34.75 E-value=42 Score=19.99 Aligned_cols=31 Identities=16% Similarity=0.253 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 033343 49 RVTEDAKSVAINEYERIKENNRTELERLDKE 79 (121)
Q Consensus 49 ~~~e~~~e~a~~eye~i~~~~~~EieRF~~e 79 (121)
.....+++.....|+.|.+...+++++|+..
T Consensus 68 ~~l~~a~~~li~~~~~l~~~~~~~~~~~~~~ 98 (99)
T d1xppa_ 68 SAIKRAVRKLSKLYEDLGTQFQKEFQRYESD 98 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3577778888899999999999999999753
No 12
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=26.23 E-value=66 Score=19.52 Aligned_cols=27 Identities=11% Similarity=0.180 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 033343 39 RKIEELKETIRVTEDAKSVAINEYERI 65 (121)
Q Consensus 39 ~Ki~~l~~eI~~~e~~~e~a~~eye~i 65 (121)
+|+..++..+..+.......+..+..+
T Consensus 95 ~ri~~l~~~~~~l~~~~~~~~~~i~~l 121 (133)
T d1fxkc_ 95 SQKNELESTLQKMGENLRAITDIMMKL 121 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444444444433
No 13
>d1asha_ a.1.1.2 (A:) Ascaris hemoglobin, domain 1 {Pig roundworm (Ascaris suum) [TaxId: 6253]}
Probab=25.45 E-value=19 Score=22.86 Aligned_cols=35 Identities=14% Similarity=0.414 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 033343 81 RADFLNMLKGFVVNQVGYAEKIANVWAKVAEETSG 115 (121)
Q Consensus 81 ~~D~~~ml~~f~~~Q~~~~~~~~~~W~~~~~e~~~ 115 (121)
-.+|..+|..|+...........++|.++...+..
T Consensus 109 f~~~~~~l~~~l~~~~g~~~~~~~AW~~l~~~~~~ 143 (147)
T d1asha_ 109 WTDFWKLFEEYLGKKTTLDEPTKQAWHEIGREFAK 143 (147)
T ss_dssp HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHH
Confidence 35688999999988777778889999999887654
No 14
>d2g7oa1 a.241.1.1 (A:60-127) TraM {Escherichia coli [TaxId: 562]}
Probab=23.36 E-value=27 Score=19.99 Aligned_cols=14 Identities=43% Similarity=0.719 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHH
Q 033343 63 ERIKENNRTELERL 76 (121)
Q Consensus 63 e~i~~~~~~EieRF 76 (121)
+.|.+...+||+||
T Consensus 48 ~~I~e~vs~~m~~f 61 (68)
T d2g7oa1 48 EDIREKVSSEMERF 61 (68)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 56777777888887
No 15
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=22.28 E-value=43 Score=25.43 Aligned_cols=30 Identities=20% Similarity=0.534 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 033343 82 ADFLNMLKGFVVNQVGYAEKIANVWAKVAE 111 (121)
Q Consensus 82 ~D~~~ml~~f~~~Q~~~~~~~~~~W~~~~~ 111 (121)
-.|+.+...|+..|-.+.+..+++|.++..
T Consensus 362 p~~R~iaE~YA~d~e~F~~DFa~Aw~KL~~ 391 (406)
T d1itka1 362 PDYREVMETFQENPMEFGMNFAKAWYKLTH 391 (406)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHHHHc
Confidence 457888889999999999999999999875
No 16
>d1r8ia_ a.8.7.1 (A:) Typo IV secretion system protein TraC {Escherichia coli [TaxId: 562]}
Probab=22.23 E-value=67 Score=20.74 Aligned_cols=30 Identities=13% Similarity=0.264 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 033343 38 IRKIEELKETIRVTEDAKSVAINEYERIKE 67 (121)
Q Consensus 38 ~~Ki~~l~~eI~~~e~~~e~a~~eye~i~~ 67 (121)
.+.+.++..+|..+...++++++.|..|..
T Consensus 7 ~eql~q~~~ql~~~k~Ql~q~k~~~~s~tG 36 (187)
T d1r8ia_ 7 GEQLEQMAQQLEQLKSQLETQKNMYESMAK 36 (187)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 367888999999999999999999987753
No 17
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]}
Probab=21.80 E-value=45 Score=25.38 Aligned_cols=31 Identities=19% Similarity=0.433 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 033343 81 RADFLNMLKGFVVNQVGYAEKIANVWAKVAE 111 (121)
Q Consensus 81 ~~D~~~ml~~f~~~Q~~~~~~~~~~W~~~~~ 111 (121)
.-.|+.+...|+..|-.+.+..+.+|.+|..
T Consensus 361 Dp~~R~iaE~YA~d~e~F~~dFa~AW~KLm~ 391 (406)
T d1mwva1 361 DPAYEKISRRFHENPEQFADAFARAWFKLTH 391 (406)
T ss_dssp SHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhCHHHHHHHHHHHHHHHHc
Confidence 3467888889999999999999999999875
Done!