BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033346
(121 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54P70|Y4757_DICDI OTU domain-containing protein DDB_G0284757 OS=Dictyostelium
discoideum GN=DDB_G0284757 PE=4 SV=2
Length = 766
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 10/116 (8%)
Query: 1 MYKSPEYHKHVRKEVVK--------QLKDCRSMYEGYVPMKYKRYYKNMAKVGEWGDHVT 52
+Y + + VRK +V QL + ++ + + Y +M+K G WGDH+T
Sbjct: 651 LYGDLSHSQEVRKTIVDWLRKNKDFQLPNGATICQFVNTNNWDDYCNDMSKNGNWGDHLT 710
Query: 53 LQAAADKFAAKICLLTSF--RDTCFIEIMPQHQAPKRELWLSFWSEVHYNSLYDIR 106
L AAA+ F +KI +++S + FIEI+P + L LS ++E HY SL +R
Sbjct: 711 LLAAAEHFGSKISIISSVESQSNFFIEIIPSKILNDKVLLLSHYAEFHYGSLCPLR 766
>sp|P22856|VL96_IRV1 Putative ubiquitin thioesterase L96 OS=Tipula iridescent virus
GN=L96 PE=3 SV=1
Length = 867
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 16/117 (13%)
Query: 8 HKHVRKEVVKQLKDCRSMYEGYV----------PMKY----KRYYKNMAKVGEWGDHVTL 53
H+ +R +VV L + E Y+ P +Y +RY KN++K G WGD + L
Sbjct: 636 HEDLRAQVVTYLTSHKEFLEPYLEYVTESGDTTPQEYAKNVERYIKNISKPGTWGDFICL 695
Query: 54 QAAADKFAAKICLLTSFRDTCFIEIMPQHQAPKRELWLSFWSEVHYNSLYDIRDAPV 110
+ ++ K LL +T +++ + K + L F + HY +L + P+
Sbjct: 696 RVLSEILKVKFNLL--ILNTRNFQVISNNDTFKPLIPLGFIDDYHYTALTPLYAEPI 750
>sp|Q96G74|OTUD5_HUMAN OTU domain-containing protein 5 OS=Homo sapiens GN=OTUD5 PE=1 SV=1
Length = 571
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 47/114 (41%), Gaps = 4/114 (3%)
Query: 1 MYKSPEYHKHVRKEVVKQLKDCRSMYEGYVPMKYKRYYKNMAKVGEWGDHVTLQAAADKF 60
+Y + H+ VRK + L + YV + Y K G+H+ +QA A+ +
Sbjct: 233 VYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMY 292
Query: 61 AAKICLLTSFRDTCFIEIMPQ----HQAPKRELWLSFWSEVHYNSLYDIRDAPV 110
+ + T +E + HQ + +S+ +HYNS+ + A +
Sbjct: 293 NRPVEVYQYSTGTSAVEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATI 346
>sp|Q9CUB6|OTUD1_MOUSE OTU domain-containing protein 1 OS=Mus musculus GN=Otud1 PE=2 SV=2
Length = 454
Score = 32.7 bits (73), Expect = 0.63, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 5/109 (4%)
Query: 1 MYKSPEYHKHVRKEVVKQLKDCRSMYEGYVPMKYKRYYKNMAKVGEWGDHVTLQAAADKF 60
+Y H+ +R++ V + D + + + A+ G W + L A
Sbjct: 302 VYGDQSLHRELREQTVHYIADHLDHFSPLIEGDVGEFIIAAAQDGAWAGYPELLAMGQML 361
Query: 61 AAKICLLTSFR-DTCFIEIMPQHQAPKREL----WLSFWSEVHYNSLYD 104
I L T R ++ + M + P+ L WLS+ S HY++++D
Sbjct: 362 NVNIHLTTGGRLESPTVSTMIHYLGPEDSLRPSIWLSWLSNGHYDAVFD 410
>sp|Q5VV17|OTUD1_HUMAN OTU domain-containing protein 1 OS=Homo sapiens GN=OTUD1 PE=2 SV=1
Length = 481
Score = 32.7 bits (73), Expect = 0.64, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 5/109 (4%)
Query: 1 MYKSPEYHKHVRKEVVKQLKDCRSMYEGYVPMKYKRYYKNMAKVGEWGDHVTLQAAADKF 60
+Y H+ +R++ V + D + + + A+ G W + L A
Sbjct: 329 VYGDQSLHRELREQTVHYIADHLDHFSPLIEGDVGEFIIAAAQDGAWAGYPELLAMGQML 388
Query: 61 AAKICLLTSFR-DTCFIEIMPQHQAPKREL----WLSFWSEVHYNSLYD 104
I L T R ++ + M + P+ L WLS+ S HY++++D
Sbjct: 389 NVNIHLTTGGRLESPTVSTMIHYLGPEDSLRPSIWLSWLSNGHYDAVFD 437
>sp|Q64408|C11B1_CAVPO Cytochrome P450 11B1, mitochondrial OS=Cavia porcellus GN=CYP11B1
PE=2 SV=1
Length = 500
Score = 32.7 bits (73), Expect = 0.68, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 77 EIMPQHQAPKRELWLSFWSEVHYNSLY 103
E++PQHQ KR+ L FW E +++ L+
Sbjct: 40 EVIPQHQGNKRQRVLQFWKEQNHDDLH 66
>sp|Q08BW0|OTU5A_DANRE OTU domain-containing protein 5-A OS=Danio rerio GN=otud5a PE=2
SV=1
Length = 560
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 1 MYKSPEYHKHVRKEVVKQLKDCRSMYEGYVPMKYKRYYKNMAKVGEWGDHVTLQAAADKF 60
+Y + H+ VRK + L + YV + Y K G+H+ +QA A+ +
Sbjct: 231 VYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMY 290
Query: 61 AAKICLLTSFRD--TCFIEIMPQHQAPKRELWLSFWSEVHYNSLYDIRDAPV 110
+ + S + F I HQ + +S+ +HYNS+ + A +
Sbjct: 291 NRPVEVYQSGTEPINTFHGI---HQNNDEPIRVSYHRNIHYNSVVNPNKATI 339
>sp|Q9SIJ9|PME11_ARATH Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=3
SV=1
Length = 352
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 36 RYYKNMAKVGEWGDHVTLQAAADKFAAKICLLTSFRDT 73
R+ K G G V L+ AADK A C++TS++DT
Sbjct: 139 RFLTIQNKFGTAGRAVALRVAADKAAFYGCVITSYQDT 176
>sp|Q7ZX21|OTU5A_XENLA OTU domain-containing protein 5-A OS=Xenopus laevis GN=otud5-a PE=2
SV=1
Length = 513
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 5/112 (4%)
Query: 1 MYKSPEYHKHVRKEVVKQLKDCRSMYEGYVPMKYKRYYKNMAKVGEWGDHVTLQAAADKF 60
+Y + H+ VRK + L + YV + Y K G+H+ +QA A+ +
Sbjct: 186 VYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMY 245
Query: 61 AAKICLLTSFRD--TCFIEIMPQHQAPKRELWLSFWSEVHYNSLYDIRDAPV 110
+ + + F I P R +S+ +HYNS+ + A +
Sbjct: 246 NRPVEVYQYGTEPINTFHGIQKNEDEPIR---VSYHRNIHYNSVVNPNKATI 294
>sp|Q755J5|BBP1_ASHGO Spindle pole component BBP1 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=BBP1 PE=3 SV=2
Length = 353
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 18/110 (16%)
Query: 10 HVRKEVVKQLKDCRSMYEGYVPMKYKRYYKNMAKVGEWGDHVTLQAAADKFAAKICLLTS 69
+R+E++++LK ++MY+ Y + Y+RY K E D+ L K A+I LT
Sbjct: 225 QLRQELIQELKQSKTMYDNYTAL-YERY--KALKDAEHPDYAEL---VSKLEAQIVDLT- 277
Query: 70 FRDTCFIEIMPQHQAPKRELWLSFWSEV--------HYNSLYDIRDAPVP 111
+ +HQ L L + + + H NS Y D P
Sbjct: 278 ---IADQQKDRRHQEELLRLQLQYEARIHELERKLNHQNSTYTANDTATP 324
>sp|Q640H3|OTU5B_XENLA OTU domain-containing protein 5-B OS=Xenopus laevis GN=otud5-b PE=2
SV=1
Length = 518
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 5/112 (4%)
Query: 1 MYKSPEYHKHVRKEVVKQLKDCRSMYEGYVPMKYKRYYKNMAKVGEWGDHVTLQAAADKF 60
+Y + H+ VRK + L + YV + Y K G+H+ +QA A+ +
Sbjct: 191 VYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMY 250
Query: 61 AAKICLLTSFRD--TCFIEIMPQHQAPKRELWLSFWSEVHYNSLYDIRDAPV 110
+ + + F I P R +S+ +HYNS+ + A +
Sbjct: 251 NRPVEVYQYGTEPINTFHGIQQNEDEPIR---VSYHRNIHYNSVVNPNKATI 299
>sp|Q6GL44|OTUD5_XENTR OTU domain-containing protein 5 OS=Xenopus tropicalis GN=otud5 PE=2
SV=1
Length = 518
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 5/112 (4%)
Query: 1 MYKSPEYHKHVRKEVVKQLKDCRSMYEGYVPMKYKRYYKNMAKVGEWGDHVTLQAAADKF 60
+Y + H+ VRK + L + YV + Y K G+H+ +QA A+ +
Sbjct: 191 VYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMY 250
Query: 61 AAKICLLTSFRD--TCFIEIMPQHQAPKRELWLSFWSEVHYNSLYDIRDAPV 110
+ + + F I P R +S+ +HYNS+ + A +
Sbjct: 251 NRPVEVYQYGTEPINTFHGIQQNEDEPIR---VSYHRNIHYNSVVNPNKATI 299
>sp|Q3U2S4|OTUD5_MOUSE OTU domain-containing protein 5 OS=Mus musculus GN=Otud5 PE=1 SV=2
Length = 566
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 1 MYKSPEYHKHVRKEVVKQLKDCRSMYEGYVPMKYKRYYKNMAKVGEWGDHVTLQAAADKF 60
+Y + H+ VRK + L + YV + Y K G+H+ +QA A+ +
Sbjct: 233 VYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMY 292
Query: 61 --AAKICLLTSFRDTCFIEIMPQHQAPKRELWLSFWSEVHYNSLYDIRDAPV 110
++ ++ F I HQ + +S+ +HYNS+ + A +
Sbjct: 293 NRPVEVYQYSTEPINTFHGI---HQNEDEPIRVSYHRNIHYNSVVNPNKATI 341
>sp|Q2YDU3|OTUD5_RAT OTU domain-containing protein 5 OS=Rattus norvegicus GN=Otud5 PE=2
SV=2
Length = 566
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 1 MYKSPEYHKHVRKEVVKQLKDCRSMYEGYVPMKYKRYYKNMAKVGEWGDHVTLQAAADKF 60
+Y + H+ VRK + L + YV + Y K G+H+ +QA A+ +
Sbjct: 233 VYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMY 292
Query: 61 --AAKICLLTSFRDTCFIEIMPQHQAPKRELWLSFWSEVHYNSLYDIRDAPV 110
++ ++ F I HQ + +S+ +HYNS+ + A +
Sbjct: 293 NRPVEVYQYSTEPINTFHGI---HQNEDEPIRVSYHRNIHYNSVVNPNKATI 341
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.449
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,018,580
Number of Sequences: 539616
Number of extensions: 1727034
Number of successful extensions: 3554
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 3536
Number of HSP's gapped (non-prelim): 19
length of query: 121
length of database: 191,569,459
effective HSP length: 88
effective length of query: 33
effective length of database: 144,083,251
effective search space: 4754747283
effective search space used: 4754747283
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)