Query 033347
Match_columns 121
No_of_seqs 76 out of 78
Neff 4.9
Searched_HMMs 13730
Date Mon Mar 25 21:23:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033347.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/033347hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1dlca3 f.1.3.1 (A:61-289) del 26.8 12 0.00087 26.5 1.5 18 79-96 42-59 (229)
2 d2nwwa1 f.49.1.1 (A:12-416) Pr 17.2 1.8E+02 0.013 21.2 7.5 69 29-97 190-262 (405)
3 d2fa8a1 c.47.1.23 (A:4-89) Hyp 5.6 1.1E+02 0.0082 18.5 1.4 11 1-11 13-23 (86)
4 d1yzma1 a.2.19.1 (A:456-501) F 4.9 2.5E+02 0.018 15.2 2.4 18 81-98 2-19 (46)
5 d1i5pa3 f.1.3.1 (A:1-263) delt 4.7 1.2E+02 0.0084 21.6 1.1 17 80-96 87-103 (263)
6 d1ciya3 f.1.3.1 (A:33-255) del 4.6 2.1E+02 0.015 19.3 2.5 16 81-96 39-54 (223)
7 d2dsma1 d.372.1.1 (A:1-64) Hyp 4.4 72 0.0052 18.7 -0.3 13 77-89 43-55 (64)
8 d1u6ea2 c.95.1.2 (A:175-317) K 4.1 3.7E+02 0.027 16.6 3.3 27 79-105 39-65 (148)
9 d1pv7a_ f.38.1.2 (A:) Lactose 4.0 4.9E+02 0.036 16.3 4.1 13 79-91 402-414 (417)
10 d1diha2 d.81.1.3 (A:131-240) D 3.0 2.5E+02 0.018 16.9 1.5 19 78-96 1-19 (110)
No 1
>d1dlca3 f.1.3.1 (A:61-289) delta-Endotoxin (insectocide), N-terminal domain {Bacillus thuringiensis tenebrionis, CRYIIIA (BT13) [TaxId: 1444]}
Probab=26.82 E-value=12 Score=26.45 Aligned_cols=18 Identities=11% Similarity=0.060 Sum_probs=14.4
Q ss_pred hccHHHHHHHHHHHHHHH
Q 033347 79 RENILALITINIHASLTF 96 (121)
Q Consensus 79 geNl~~~~~~~~~~~Ld~ 96 (121)
++|+|+.++.++++++|+
T Consensus 42 ~~~~w~~~~~~ve~lId~ 59 (229)
T d1dlca3 42 SEDPWKAFMEQVEALMDQ 59 (229)
T ss_dssp SHHHHHHHHHHHHHHHTC
T ss_pred CCcHHHHHHHHHHHHHHH
Confidence 467898888888888765
No 2
>d2nwwa1 f.49.1.1 (A:12-416) Proton glutamate symport protein {Pyrococcus horikoshii [TaxId: 53953]}
Probab=17.21 E-value=1.8e+02 Score=21.18 Aligned_cols=69 Identities=16% Similarity=0.036 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHhHHHhhcCCchHHHHHHHHHHHHHH----HHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Q 033347 29 LAYLLTHGVLGFSMGSLWRLGVDWGLSIFLCTIARSAG----AMGYILTSSFLIRENILALITINIHASLTFI 97 (121)
Q Consensus 29 l~~l~~~GllGl~LG~~w~~~~sw~~si~~gal~~~~g----~~~~v~l~s~L~geNl~~~~~~~~~~~Ld~~ 97 (121)
+..+.|+|+.++.-...=+.+.+-..+...-.+...++ .+....+.....|.||++++-...+..+.-+
T Consensus 190 im~laPigvf~l~a~~~~~~g~~~l~~l~~~~~~~~~~~~l~~~~~~~i~~~~~~~~p~~~~~~~~~~~~~Af 262 (405)
T d2nwwa1 190 VMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAF 262 (405)
T ss_dssp HTTSHHHHHHHHHHHHHHHTGGGCCTHHHHHHHHHHHHHHHHHHHTHHHHHHTTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHhhhccchhheee
Confidence 33457888887777655555544433333212111112 2223335555789999999887777666544
No 3
>d2fa8a1 c.47.1.23 (A:4-89) Hypothetical protein Atu0228 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=5.65 E-value=1.1e+02 Score=18.48 Aligned_cols=11 Identities=27% Similarity=0.516 Sum_probs=8.6
Q ss_pred CcchhHHHHHH
Q 033347 1 MRWGVAAGRKT 11 (121)
Q Consensus 1 lR~G~raa~~~ 11 (121)
.||..|++|++
T Consensus 13 C~w~~Ra~wla 23 (86)
T d2fa8a1 13 CNWLLRAGWMA 23 (86)
T ss_dssp TTCHHHHHHHH
T ss_pred CCChHHHHHHH
Confidence 47888888884
No 4
>d1yzma1 a.2.19.1 (A:456-501) FYVE finger-containing Rab5 effector protein rabenosyn-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.93 E-value=2.5e+02 Score=15.17 Aligned_cols=18 Identities=17% Similarity=-0.062 Sum_probs=14.2
Q ss_pred cHHHHHHHHHHHHHHHHH
Q 033347 81 NILALITINIHASLTFIF 98 (121)
Q Consensus 81 Nl~~~~~~~~~~~Ld~~~ 98 (121)
||+...++++.+.+.|.-
T Consensus 2 nPllqQi~~ik~yI~QAk 19 (46)
T d1yzma1 2 SPLLQQIHNITSFIRQAK 19 (46)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHH
Confidence 788888888888887753
No 5
>d1i5pa3 f.1.3.1 (A:1-263) delta-Endotoxin (insectocide), N-terminal domain {Bacillus thuringiensis subsp. kurstaki, CRY2AA [TaxId: 29339]}
Probab=4.69 E-value=1.2e+02 Score=21.59 Aligned_cols=17 Identities=18% Similarity=0.100 Sum_probs=14.7
Q ss_pred ccHHHHHHHHHHHHHHH
Q 033347 80 ENILALITINIHASLTF 96 (121)
Q Consensus 80 eNl~~~~~~~~~~~Ld~ 96 (121)
+|+|+.++.++++++|+
T Consensus 87 ~~~w~~~~~~vE~LIdq 103 (263)
T d1i5pa3 87 TNLMQDILRETEQFLNQ 103 (263)
T ss_dssp CHHHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 56999999999999865
No 6
>d1ciya3 f.1.3.1 (A:33-255) delta-Endotoxin (insectocide), N-terminal domain {Bacillus thuringiensis, CRYIA (A) [TaxId: 1428]}
Probab=4.59 E-value=2.1e+02 Score=19.30 Aligned_cols=16 Identities=6% Similarity=0.067 Sum_probs=10.7
Q ss_pred cHHHHHHHHHHHHHHH
Q 033347 81 NILALITINIHASLTF 96 (121)
Q Consensus 81 Nl~~~~~~~~~~~Ld~ 96 (121)
|.|+.++.++++++|+
T Consensus 39 ~~W~~~~~~ve~LId~ 54 (223)
T d1ciya3 39 SQWDAFLVQIEQLINQ 54 (223)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred cHHHHHHHHHHHHHHH
Confidence 4577777777777654
No 7
>d2dsma1 d.372.1.1 (A:1-64) Hypothetical protein YqaI {Bacillus subtilis [TaxId: 1423]}
Probab=4.43 E-value=72 Score=18.70 Aligned_cols=13 Identities=23% Similarity=0.455 Sum_probs=8.9
Q ss_pred HhhccHHHHHHHH
Q 033347 77 LIRENILALITIN 89 (121)
Q Consensus 77 L~geNl~~~~~~~ 89 (121)
+++||...|+.+|
T Consensus 43 ~LreN~~~Yl~t~ 55 (64)
T d2dsma1 43 ILRENLERYLREQ 55 (64)
T ss_dssp EEHHHHHHHHHHT
T ss_pred eehhhhHHHHHHH
Confidence 4678877776654
No 8
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=4.12 E-value=3.7e+02 Score=16.60 Aligned_cols=27 Identities=15% Similarity=0.118 Sum_probs=20.6
Q ss_pred hccHHHHHHHHHHHHHHHHHHHcCCCC
Q 033347 79 RENILALITINIHASLTFIFSAAGVNI 105 (121)
Q Consensus 79 geNl~~~~~~~~~~~Ld~~~~~lg~~~ 105 (121)
|.+++...++++.+.+++++++.|+..
T Consensus 39 G~~Vf~~a~~~v~~~i~~~L~~~gl~~ 65 (148)
T d1u6ea2 39 GPAVFRWAAFKMGDVGRRAMDAAGVRP 65 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCG
T ss_pred cHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 455667778888888888888888753
No 9
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}
Probab=3.96 E-value=4.9e+02 Score=16.33 Aligned_cols=13 Identities=15% Similarity=0.273 Sum_probs=5.0
Q ss_pred hccHHHHHHHHHH
Q 033347 79 RENILALITINIH 91 (121)
Q Consensus 79 geNl~~~~~~~~~ 91 (121)
+++|....-++.+
T Consensus 402 ~~~~~~~~r~~~~ 414 (417)
T d1pv7a_ 402 GPGPLSLLRRQVN 414 (417)
T ss_dssp CSSCTTHHHHHHH
T ss_pred CCCccchhHhhhc
Confidence 3334433333333
No 10
>d1diha2 d.81.1.3 (A:131-240) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}
Probab=3.01 E-value=2.5e+02 Score=16.91 Aligned_cols=19 Identities=5% Similarity=0.009 Sum_probs=13.2
Q ss_pred hhccHHHHHHHHHHHHHHH
Q 033347 78 IRENILALITINIHASLTF 96 (121)
Q Consensus 78 ~geNl~~~~~~~~~~~Ld~ 96 (121)
+|.|++..+..+..+.+++
T Consensus 1 IGvnll~~l~~~~a~~l~~ 19 (110)
T d1diha2 1 VGVNVMLKLLEKAAKVMGD 19 (110)
T ss_dssp HHHHHHHHHHHHHHHHHTT
T ss_pred ChHHHHHHHHHHHHHhccc
Confidence 4778877777777776653
Done!