BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033348
(121 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5Q995|KTAP2_IXOSC Protein KRTCAP2 homolog OS=Ixodes scapularis PE=2 SV=1
Length = 135
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 70/108 (64%), Gaps = 4/108 (3%)
Query: 4 SGSSMLYSFLMFIVILSLQQMYRGKLASTELFTILGGFISSLIFLVSLTFIGNFQET--- 60
SG+S + + +F+++ + Q+Y+ +L S++ I+GGF+ S++F++ LT I NF+
Sbjct: 5 SGTSGMLATCLFMLLFATMQIYKSQLTSSQPMAIVGGFLGSVLFILILTAISNFETHFFG 64
Query: 61 SGMKTGW-GAVIVAELIALIAASTVHRVCITTCFLFSAGLLYEVNKLS 107
+T V++A +IA+ A+ VHRVCITTC +FS LY V+++S
Sbjct: 65 RNFQTKLIPEVVIALVIAMAASGMVHRVCITTCLIFSIVALYYVSRIS 112
>sp|Q1HQF8|KTAP2_AEDAE Protein KRTCAP2 homolog OS=Aedes aegypti GN=AAEL007634 PE=2 SV=1
Length = 132
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 59/97 (60%), Gaps = 6/97 (6%)
Query: 16 IVILSLQQMYRGKLASTELFTILGGFISSLIFLVSLTFIGNFQETSGMKTGWGAVIVAEL 75
++I S QMY+ +AS+++ T+ GGF+ S +F++SLT + N E + G+ A + E+
Sbjct: 17 VLIFSAMQMYKPLIASSQMATVFGGFLGSWLFILSLTAVSNL-EAVVLGKGFQAKLFPEV 75
Query: 76 I-----ALIAASTVHRVCITTCFLFSAGLLYEVNKLS 107
+L A VHRVC TTC LFS LY +N++S
Sbjct: 76 AFCLIGSLFACGMVHRVCATTCILFSVAALYYINRIS 112
>sp|Q8N6L1|KTAP2_HUMAN Keratinocyte-associated protein 2 OS=Homo sapiens GN=KRTCAP2 PE=1
SV=1
Length = 162
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 23 QMYRGKLASTELFTILGGFISSLIFLVSLTFIGNFQETSGMKTGWGAVIVAELIAL---- 78
QMY +LASTE TI GG + S +F+ SLT N + K G+ A I E++
Sbjct: 50 QMYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNLENLVFGK-GFQAKIFPEILLCLLLA 108
Query: 79 -IAASTVHRVCITTCFLFSAGLLYEVNKLS 107
A+ +HRVC+TTCF+FS LY +NK+S
Sbjct: 109 LFASGLIHRVCVTTCFIFSMVGLYYINKIS 138
>sp|A6QQ59|KTAP2_BOVIN Keratinocyte-associated protein 2 OS=Bos taurus GN=KRTCAP2 PE=2
SV=1
Length = 136
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 23 QMYRGKLASTELFTILGGFISSLIFLVSLTFIGNFQETSGMKTGWGAVIVAELIAL---- 78
QMY +LASTE TI GG + S +F+ SLT N + K G+ A I E++
Sbjct: 24 QMYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNLENLVFGK-GFQAKIFPEILLCLLLA 82
Query: 79 -IAASTVHRVCITTCFLFSAGLLYEVNKLS 107
A+ +HRVC+TTCF+FS LY +NK+S
Sbjct: 83 LFASGLIHRVCVTTCFIFSMVGLYYINKIS 112
>sp|P86229|KTAP2_CANFA Keratinocyte-associated protein 2 OS=Canis familiaris GN=KRTCAP2
PE=1 SV=1
Length = 136
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 23 QMYRGKLASTELFTILGGFISSLIFLVSLTFIGNFQETSGMKTGWGAVIVAELIAL---- 78
QMY +LASTE TI GG + S +F+ SLT N + K G+ A I E++
Sbjct: 24 QMYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNLENLVFGK-GFQAKIFPEILLCLLLA 82
Query: 79 -IAASTVHRVCITTCFLFSAGLLYEVNKLS 107
A+ +HRVC+TTCF+FS LY +NK+S
Sbjct: 83 LFASGLIHRVCVTTCFIFSMVGLYYINKIS 112
>sp|B2RZC9|KTAP2_RAT Keratinocyte-associated protein 2 OS=Rattus norvegicus GN=Krtcap2
PE=2 SV=2
Length = 136
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 23 QMYRGKLASTELFTILGGFISSLIFLVSLTFIGNFQETSGMKTGWGAVIVAELIAL---- 78
Q+Y +LASTE TI GG + S +F+ SLT N + K G+ A I E++
Sbjct: 24 QIYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNLENLVFGK-GFQAKIFPEILLCLLLA 82
Query: 79 -IAASTVHRVCITTCFLFSAGLLYEVNKLS 107
A+ +HRVC+TTCF+FS LY +NK+S
Sbjct: 83 LFASGLIHRVCVTTCFIFSMVGLYYINKIS 112
>sp|Q5RL79|KTAP2_MOUSE Keratinocyte-associated protein 2 OS=Mus musculus GN=Krtcap2 PE=2
SV=2
Length = 136
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 23 QMYRGKLASTELFTILGGFISSLIFLVSLTFIGNFQETSGMKTGWGAVIVAELIAL---- 78
Q+Y +LASTE TI GG + S +F+ SLT N + K G+ A I E++
Sbjct: 24 QIYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNLENLVFGK-GFQAKIFPEILLCLLLA 82
Query: 79 -IAASTVHRVCITTCFLFSAGLLYEVNKLS 107
A+ +HRVC+TTCF+FS LY +NK+S
Sbjct: 83 LFASGLIHRVCVTTCFIFSMVGLYYINKIS 112
>sp|Q54L98|KTAP2_DICDI Protein KRTCAP2 homolog OS=Dictyostelium discoideum GN=DDB_G0286759
PE=3 SV=1
Length = 127
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Query: 5 GSSMLYSFLMFIVILSLQQMYRGKLASTELFTILGGFISSLIFLVSLTFIGNFQETSGMK 64
GS++L S +++++I +L + S+E TILGGF+ S +F + +TFIG + +
Sbjct: 9 GSTVLISLILWVIIFALLNIGSNFFRSSEGATILGGFVGSFLFFLQMTFIGAIKRDVKLL 68
Query: 65 TGWGAVIVAELIALIAASTVHRVCITTCFLFSAGLLYEVNKLSGMMIARSE 115
AVI+ +I +S+VHRV TT +FS G ++ +N S + ++ E
Sbjct: 69 ETVLAVIITAMI----SSSVHRVSGTTSIIFSIGWIFYLNHASTKIYSKLE 115
>sp|Q8INQ7|KTAP2_DROME Protein KRTCAP2 homolog OS=Drosophila melanogaster GN=CG31460 PE=2
SV=1
Length = 141
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 10/100 (10%)
Query: 31 STELFTILGGFISSLIFLVSLTFIGNFQETSGMKTGWGAVIVAELI-----ALIAASTVH 85
++L +LGG++ S +F++SLT + N E + A ++ E+I + AA VH
Sbjct: 37 DSQLRVLLGGYLFSWVFILSLTCVSN-AEMVVFGQDFQAKLLPEIIFCLSLTVAAAGLVH 95
Query: 86 RVCITTCFLFSAGLLYEVNKLS----GMMIARSESKTKRH 121
RVC TT LFS LY +N++S + + ++ T R
Sbjct: 96 RVCATTSVLFSLVGLYFLNRISTKYYSVQVPSVDAPTTRK 135
>sp|Q295N5|KTAP2_DROPS Protein KRTCAP2 homolog OS=Drosophila pseudoobscura pseudoobscura
GN=GA16263 PE=3 SV=3
Length = 140
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 32 TELFTILGGFISSLIFLVSLTFIGNFQETSGMKTGWGAVIVAELI-----ALIAASTVHR 86
++L ++GG++ S +F++SLT + N E + A +V E++ + AA VHR
Sbjct: 38 SQLNVLVGGYLFSWLFILSLTCVSN-AEMLIFGPDFQAKLVPEILFCLSLTVAAAGIVHR 96
Query: 87 VCITTCFLFSAGLLYEVNKLS 107
VC TT LFS LY +N++S
Sbjct: 97 VCATTSVLFSLVGLYFLNRIS 117
>sp|B8F7D1|END4_HAEPS Probable endonuclease 4 OS=Haemophilus parasuis serovar 5 (strain
SH0165) GN=nfo PE=3 SV=1
Length = 281
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 61 SGMKTGWGAVIVAELIALIAASTVHRVCITTCFLFSAGLLYEVNKLS 107
G GW +AE+I + VC+ TC LFSAG Y+++ L+
Sbjct: 150 QGSNLGWRFEHLAEIIEQVENKQRVGVCLDTCHLFSAG--YDISSLA 194
>sp|Q30PH2|END4_SULDN Probable endonuclease 4 OS=Sulfurimonas denitrificans (strain ATCC
33889 / DSM 1251) GN=nfo PE=3 SV=1
Length = 281
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 62 GMKTGWGAVIVAELIALIAASTVHRVCITTCFLFSAG 98
G GW +A++I + + VCI TC +FSAG
Sbjct: 152 GSNLGWKFEHLAQIIDKVEDKSRVGVCIDTCHMFSAG 188
>sp|Q6LUP5|END4_PHOPR Probable endonuclease 4 OS=Photobacterium profundum GN=nfo PE=3
SV=1
Length = 279
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 61 SGMKTGWGAVIVAELIALIAASTVHRVCITTCFLFSAG 98
G GW +AE+I I + VCI TC F+AG
Sbjct: 147 QGSNVGWRFEHLAEIIDQIEDKSRVGVCIDTCHTFAAG 184
>sp|C0QRI1|END4_PERMH Probable endonuclease 4 OS=Persephonella marina (strain DSM 14350 /
EX-H1) GN=nfo PE=3 SV=1
Length = 285
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 87 VCITTCFLFSAGLLYEVNKLSGMMIARSE 115
VC+ TC ++SAG Y++N G RSE
Sbjct: 174 VCVDTCHIYSAG--YKINDEEGFYSYRSE 200
>sp|B0K969|APT_THEP3 Adenine phosphoribosyltransferase OS=Thermoanaerobacter
pseudethanolicus (strain ATCC 33223 / 39E) GN=apt PE=3
SV=1
Length = 173
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 30 ASTELFTILGGFISSLIFLVSLTFIGNFQETSG 62
AS +L LGG + S+IFL LTF+ ++ G
Sbjct: 132 ASAKLVESLGGIVDSIIFLTELTFLDGRKKLDG 164
>sp|B0K0N0|APT_THEPX Adenine phosphoribosyltransferase OS=Thermoanaerobacter sp. (strain
X514) GN=apt PE=3 SV=1
Length = 173
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 30 ASTELFTILGGFISSLIFLVSLTFIGNFQETSG 62
AS +L LGG + S+IFL LTF+ ++ G
Sbjct: 132 ASAKLVEKLGGIVDSIIFLSELTFLDGRKKLDG 164
>sp|B3QQA9|END4_CHLP8 Probable endonuclease 4 OS=Chlorobaculum parvum (strain NCIB 8327)
GN=nfo PE=3 SV=1
Length = 281
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 61 SGMKTGWGAVIVAELIALIAASTVHRVCITTCFLFSAG 98
G GW +A +I L+ + VC+ TC LF++G
Sbjct: 150 QGSNLGWRFEHLARIIELVEDKSRVGVCLDTCHLFASG 187
>sp|Q8KFL0|END4_CHLTE Probable endonuclease 4 OS=Chlorobium tepidum (strain ATCC 49652 /
DSM 12025 / TLS) GN=nfo PE=3 SV=1
Length = 281
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 61 SGMKTGWGAVIVAELIALIAASTVHRVCITTCFLFSAG 98
G GW +A +I L+ + VC+ TC LF++G
Sbjct: 150 QGSNLGWRFEHLARIIELVEDKSRVGVCLDTCHLFASG 187
>sp|Q8RAL9|APT_THETN Adenine phosphoribosyltransferase OS=Thermoanaerobacter
tengcongensis (strain DSM 15242 / JCM 11007 / NBRC
100824 / MB4) GN=apt PE=3 SV=1
Length = 173
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 30 ASTELFTILGGFISSLIFLVSLTFIGNFQETSG 62
AS +L LGG + S++FL LTF+ ++ G
Sbjct: 132 ASAKLVESLGGVVDSILFLTELTFLDGRKKLDG 164
>sp|Q966U0|END4_DICDI Endonuclease 4 homolog OS=Dictyostelium discoideum GN=apnA PE=1
SV=1
Length = 542
Score = 28.9 bits (63), Expect = 9.0, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 60 TSGMKTGWGAVI--VAELIALIAASTVHRVCITTCFLFSAG 98
T+G T G + ++IAL+ T VC+ TC +F+AG
Sbjct: 406 TAGQGTNLGYTFEHLRDMIALVKDKTRVGVCLDTCHMFAAG 446
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.137 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,872,979
Number of Sequences: 539616
Number of extensions: 1002243
Number of successful extensions: 4991
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 4963
Number of HSP's gapped (non-prelim): 44
length of query: 121
length of database: 191,569,459
effective HSP length: 88
effective length of query: 33
effective length of database: 144,083,251
effective search space: 4754747283
effective search space used: 4754747283
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)