BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033349
(121 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q32LJ2|ARFRP_BOVIN ADP-ribosylation factor-related protein 1 OS=Bos taurus GN=ARFRP1
PE=2 SV=1
Length = 201
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 87/122 (71%), Gaps = 1/122 (0%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLKSVYS-NVEGLPPDRIVPTVGLN 59
M++L GL+KY+F K E+ VLILG+D AGKTT LE+ K+ ++ N +G+ +I TVGLN
Sbjct: 1 MYTLLSGLYKYMFQKDEYCVLILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLN 60
Query: 60 IGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALGKKGS 119
IG ++V ++L+FWDLGGQ L+S+W+KYY E H V++VID+ R +SK A K +
Sbjct: 61 IGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLSESKQAFEKMVT 120
Query: 120 SE 121
SE
Sbjct: 121 SE 122
>sp|Q63055|ARFRP_RAT ADP-ribosylation factor-related protein 1 OS=Rattus norvegicus
GN=Arfrp1 PE=2 SV=1
Length = 201
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 87/122 (71%), Gaps = 1/122 (0%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLKSVYS-NVEGLPPDRIVPTVGLN 59
M++L GL+KY+F K E+ +LILG+D AGKTT LE+ K+ ++ N +G+ +I TVGLN
Sbjct: 1 MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLN 60
Query: 60 IGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALGKKGS 119
IG ++V ++L+FWDLGGQ L+S+W+KYY E H V++VID+ R +SK A K S
Sbjct: 61 IGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLSESKEAFEKVVS 120
Query: 120 SE 121
SE
Sbjct: 121 SE 122
>sp|Q8BXL7|ARFRP_MOUSE ADP-ribosylation factor-related protein 1 OS=Mus musculus GN=Arfrp1
PE=2 SV=2
Length = 201
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 87/122 (71%), Gaps = 1/122 (0%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLKSVYS-NVEGLPPDRIVPTVGLN 59
M++L GL+KY+F K E+ +LILG+D AGKTT LE+ K+ ++ N +G+ +I TVGLN
Sbjct: 1 MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLN 60
Query: 60 IGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALGKKGS 119
IG ++V ++L+FWDLGGQ L+S+W+KYY E H V++VID+ R +SK A K S
Sbjct: 61 IGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLSESKEAFEKVVS 120
Query: 120 SE 121
SE
Sbjct: 121 SE 122
>sp|Q5R579|ARFRP_PONAB ADP-ribosylation factor-related protein 1 OS=Pongo abelii GN=ARFRP1
PE=2 SV=1
Length = 201
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 87/122 (71%), Gaps = 1/122 (0%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLKSVYS-NVEGLPPDRIVPTVGLN 59
M++L GL+KY+F K E+ +LILG+D AGKTT LE+ K+ ++ N +G+ +I TVGLN
Sbjct: 1 MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLN 60
Query: 60 IGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALGKKGS 119
IG ++V ++L+FWDLGGQ L+S+W+KYY E H V++VID+ R +SK A K +
Sbjct: 61 IGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVT 120
Query: 120 SE 121
SE
Sbjct: 121 SE 122
>sp|Q13795|ARFRP_HUMAN ADP-ribosylation factor-related protein 1 OS=Homo sapiens GN=ARFRP1
PE=1 SV=1
Length = 201
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 87/122 (71%), Gaps = 1/122 (0%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLKSVYS-NVEGLPPDRIVPTVGLN 59
M++L GL+KY+F K E+ +LILG+D AGKTT LE+ K+ ++ N +G+ +I TVGLN
Sbjct: 1 MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLN 60
Query: 60 IGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALGKKGS 119
IG ++V ++L+FWDLGGQ L+S+W+KYY E H V++VID+ R +SK A K +
Sbjct: 61 IGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVT 120
Query: 120 SE 121
SE
Sbjct: 121 SE 122
>sp|Q02804|ARL3_YEAST ADP-ribosylation factor-like protein 3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ARL3 PE=1 SV=1
Length = 198
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNI 60
MF L GL+ K ++ +LILG+D AGKTT LE LK YS + ++I PTVG N+
Sbjct: 1 MFHLVKGLYNNWNKKEQYSILILGLDNAGKTTFLETLKKEYS-LAFKALEKIQPTVGQNV 59
Query: 61 GRIEVSNSKLV-FWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTAL 114
I V + +++ FWD+GGQ LRS+W +YY H ++F++D++ R ++ T L
Sbjct: 60 ATIPVDSKQILKFWDVGGQESLRSMWSEYYSLCHGIIFIVDSSDRERLDECSTTL 114
>sp|Q54R04|ARL8_DICDI ADP-ribosylation factor-like protein 8 OS=Dictyostelium discoideum
GN=arl8 PE=3 SV=1
Length = 185
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 67/113 (59%), Gaps = 6/113 (5%)
Query: 2 FSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIG 61
F +K +F K E + ++G+ +GKTTL+ +V SN G D I PT+G N+
Sbjct: 4 FESIINFFKSLFWKQEMELTLVGLQGSGKTTLV----NVISN-GGFIEDTI-PTIGFNMK 57
Query: 62 RIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTAL 114
++ N + WD+GGQP RS+WE+Y +A+VFV+D+A +FE SK AL
Sbjct: 58 KVTKGNVTIKLWDIGGQPRFRSMWERYCRGVNAIVFVVDSADREKFEQSKQAL 110
>sp|Q8BGX0|TRI23_MOUSE E3 ubiquitin-protein ligase TRIM23 OS=Mus musculus GN=Trim23 PE=2
SV=1
Length = 574
Score = 84.0 bits (206), Expect = 3e-16, Method: Composition-based stats.
Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 7/106 (6%)
Query: 11 YIFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKL 70
+I K E V+ LG+D AGKTT+L KLK E + P +PT+G N+ +E N K
Sbjct: 398 HIGPKMEIRVVTLGLDGAGKTTILFKLK----QDEFMQP---IPTIGFNVETVEYKNLKF 450
Query: 71 VFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALGK 116
WD+GG+ LR +W+ YY AVVFV+D++ R ++ + L K
Sbjct: 451 TIWDVGGKHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAK 496
>sp|P36406|TRI23_HUMAN E3 ubiquitin-protein ligase TRIM23 OS=Homo sapiens GN=TRIM23 PE=1
SV=1
Length = 574
Score = 84.0 bits (206), Expect = 3e-16, Method: Composition-based stats.
Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 7/106 (6%)
Query: 11 YIFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKL 70
+I K E V+ LG+D AGKTT+L KLK E + P +PT+G N+ +E N K
Sbjct: 398 HIGPKMEIRVVTLGLDGAGKTTILFKLK----QDEFMQP---IPTIGFNVETVEYKNLKF 450
Query: 71 VFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALGK 116
WD+GG+ LR +W+ YY AVVFV+D++ R ++ + L K
Sbjct: 451 TIWDVGGKHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAK 496
>sp|Q09654|TRI23_CAEEL E3 ubiquitin-protein ligase arc-1 OS=Caenorhabditis elegans
GN=arc-1 PE=3 SV=3
Length = 539
Score = 83.6 bits (205), Expect = 3e-16, Method: Composition-based stats.
Identities = 40/100 (40%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Query: 17 EFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLG 76
E V++LG+D AGKT+++ +LK V + P PT+G NI I N +L FWD+G
Sbjct: 369 ESRVVLLGLDGAGKTSIVRRLKKVQMDTVMAPH----PTIGFNIETIHYKNYRLNFWDVG 424
Query: 77 GQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALGK 116
G P LR +W+ YY A A+ +VID RF ++ L +
Sbjct: 425 GLPKLRHLWKHYYSNAQAIFYVIDGYAVERFSEAIKELNR 464
>sp|P36407|TRI23_RAT E3 ubiquitin-protein ligase TRIM23 OS=Rattus norvegicus GN=Trim23
PE=2 SV=2
Length = 573
Score = 83.2 bits (204), Expect = 4e-16, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 7/102 (6%)
Query: 15 KTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWD 74
K E V+ LG+D AGKTT+L KLK E + P +PT+G N+ +E N K WD
Sbjct: 401 KMEIRVVTLGLDGAGKTTILFKLK----QDEFMQP---IPTIGFNVETVEYKNLKFTIWD 453
Query: 75 LGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALGK 116
+GG+ LR +W+ YY AVVFV+D++ R ++ + L K
Sbjct: 454 VGGKHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAK 495
>sp|P26991|ARF_GIAIN ADP-ribosylation factor OS=Giardia intestinalis PE=3 SV=3
Length = 191
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 62/107 (57%), Gaps = 13/107 (12%)
Query: 12 IFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEVSNSK 69
+F+K E +L++G+D AGKTT+L KL V + V PT+G N+ +E N
Sbjct: 12 LFSKKEVRILMVGLDAAGKTTILYKLMLGEVVTTV---------PTIGFNVETVEYKNIN 62
Query: 70 LVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAAC--PSRFEDSKTAL 114
WD+GGQ +R +W YY+ A+++VID+A P R ED+K L
Sbjct: 63 FTVWDVGGQDSIRPLWRHYYQNTDALIYVIDSADLEPKRIEDAKNEL 109
>sp|P40994|ARF3_YEAST ADP-ribosylation factor 3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ARF3 PE=1 SV=2
Length = 183
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 7/103 (6%)
Query: 12 IFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLV 71
+F E +L+LG+DKAGKTT+L KLK PTVG N+ + N K
Sbjct: 12 LFGSKEMKILMLGLDKAGKTTILYKLKLNKIKTS-------TPTVGFNVETVTYKNVKFN 64
Query: 72 FWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTAL 114
WD+GGQ LR +W Y+ A++FVID++ +R E++K L
Sbjct: 65 MWDVGGQQRLRPLWRHYFPATTALIFVIDSSARNRMEEAKEEL 107
>sp|Q55AD9|ARL5_DICDI ADP-ribosylation factor-like protein 5 OS=Dictyostelium discoideum
GN=arl5 PE=3 SV=1
Length = 183
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 63/123 (51%), Gaps = 13/123 (10%)
Query: 2 FSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIV---PTVGL 58
S+F +W F E+ V+I+G++ AGKTT L KL D +V PTVG
Sbjct: 5 LSIFASIWNRFFNNAEYKVIIVGLNAAGKTTTLYKL----------LLDEVVSTTPTVGS 54
Query: 59 NIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALGKKG 118
N+ N +L+ WDLGGQ LRS W +YY AV+ VID+ +R K L K
Sbjct: 55 NLEEFVYRNIRLLMWDLGGQDLLRSTWNQYYINTQAVILVIDSTDRARVNLIKEELFKML 114
Query: 119 SSE 121
+ E
Sbjct: 115 AHE 117
>sp|P51643|ARF1_XENLA ADP-ribosylation factor 1 OS=Xenopus laevis GN=arf1 PE=2 SV=2
Length = 181
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGL 58
M ++F L+K +F K E +L++G+D AGKTT+L KLK + + +PT+G
Sbjct: 1 MGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVT---------TIPTIGF 51
Query: 59 NIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTAL 114
N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L
Sbjct: 52 NVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREEL 107
>sp|P40946|ARF3_DROME ADP-ribosylation factor 3 OS=Drosophila melanogaster GN=Arf51F PE=2
SV=3
Length = 175
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 7/105 (6%)
Query: 12 IFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLV 71
IF E +L+LG+D AGKTT+L KLK S +PTVG N+ + N K
Sbjct: 8 IFGNKEMRILMLGLDAAGKTTILYKLKLGQSVT-------TIPTVGFNVETVTYKNVKFN 60
Query: 72 FWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALGK 116
WD+GGQ +R +W YY ++FV+D A R ++++T L +
Sbjct: 61 VWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHR 105
>sp|Q9Y7Z2|ARF6_SCHPO ADP-ribosylation factor 6 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=arf6 PE=3 SV=1
Length = 184
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 65/117 (55%), Gaps = 10/117 (8%)
Query: 3 SLFYGLWK---YIFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLN 59
SLF G K +F+ E +L+LG+D AGKTT+L KLK S V +PTVG N
Sbjct: 4 SLFKGFSKPFSRLFSNKEMRILMLGLDAAGKTTILYKLKLNQSVV-------TIPTVGFN 56
Query: 60 IGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALGK 116
+ + N K WD+GGQ +R +W Y+ ++FV+D+A +R +++ L +
Sbjct: 57 VETVTYKNIKFNVWDVGGQDKIRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHR 113
>sp|P84079|ARF1_RAT ADP-ribosylation factor 1 OS=Rattus norvegicus GN=Arf1 PE=1 SV=2
Length = 181
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGL 58
M ++F L+K +F K E +L++G+D AGKTT+L KLK + + +PT+G
Sbjct: 1 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVT---------TIPTIGF 51
Query: 59 NIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTAL 114
N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L
Sbjct: 52 NVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREEL 107
>sp|P84078|ARF1_MOUSE ADP-ribosylation factor 1 OS=Mus musculus GN=Arf1 PE=1 SV=2
Length = 181
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGL 58
M ++F L+K +F K E +L++G+D AGKTT+L KLK + + +PT+G
Sbjct: 1 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVT---------TIPTIGF 51
Query: 59 NIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTAL 114
N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L
Sbjct: 52 NVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREEL 107
>sp|Q4R5P2|ARF1_MACFA ADP-ribosylation factor 1 OS=Macaca fascicularis GN=ARF1 PE=2 SV=3
Length = 181
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGL 58
M ++F L+K +F K E +L++G+D AGKTT+L KLK + + +PT+G
Sbjct: 1 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVT---------TIPTIGF 51
Query: 59 NIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTAL 114
N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L
Sbjct: 52 NVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREEL 107
>sp|P84077|ARF1_HUMAN ADP-ribosylation factor 1 OS=Homo sapiens GN=ARF1 PE=1 SV=2
Length = 181
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGL 58
M ++F L+K +F K E +L++G+D AGKTT+L KLK + + +PT+G
Sbjct: 1 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVT---------TIPTIGF 51
Query: 59 NIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTAL 114
N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L
Sbjct: 52 NVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREEL 107
>sp|P84080|ARF1_BOVIN ADP-ribosylation factor 1 OS=Bos taurus GN=ARF1 PE=1 SV=2
Length = 181
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGL 58
M ++F L+K +F K E +L++G+D AGKTT+L KLK + + +PT+G
Sbjct: 1 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVT---------TIPTIGF 51
Query: 59 NIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTAL 114
N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L
Sbjct: 52 NVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREEL 107
>sp|P84082|ARF2_RAT ADP-ribosylation factor 2 OS=Rattus norvegicus GN=Arf2 PE=2 SV=1
Length = 181
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 66/118 (55%), Gaps = 11/118 (9%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGL 58
M ++F L+K +F K E +L++G+D AGKTT+L KLK + + + PT+G
Sbjct: 1 MGNVFEKLFKSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGF 51
Query: 59 NIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALGK 116
N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L +
Sbjct: 52 NVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTR 109
>sp|Q8BSL7|ARF2_MOUSE ADP-ribosylation factor 2 OS=Mus musculus GN=Arf2 PE=1 SV=2
Length = 181
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 66/118 (55%), Gaps = 11/118 (9%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGL 58
M ++F L+K +F K E +L++G+D AGKTT+L KLK + + + PT+G
Sbjct: 1 MGNVFEKLFKSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGF 51
Query: 59 NIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALGK 116
N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L +
Sbjct: 52 NVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTR 109
>sp|P84081|ARF2_BOVIN ADP-ribosylation factor 2 OS=Bos taurus GN=ARF2 PE=2 SV=1
Length = 181
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 66/118 (55%), Gaps = 11/118 (9%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGL 58
M ++F L+K +F K E +L++G+D AGKTT+L KLK + + + PT+G
Sbjct: 1 MGNVFEKLFKSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGF 51
Query: 59 NIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALGK 116
N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L +
Sbjct: 52 NVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTR 109
>sp|Q9D0J4|ARL2_MOUSE ADP-ribosylation factor-like protein 2 OS=Mus musculus GN=Arl2 PE=1
SV=1
Length = 184
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 56/98 (57%), Gaps = 7/98 (7%)
Query: 17 EFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLG 76
E +L+LG+D AGKTT+L+K G D I PT+G NI +E KL WD+G
Sbjct: 16 ELRLLMLGLDNAGKTTILKKFN-------GEDVDTISPTLGFNIKTLEHRGFKLNIWDVG 68
Query: 77 GQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTAL 114
GQ LRS W Y+E +++V+D+A R +D + L
Sbjct: 69 GQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQREL 106
>sp|Q2TA37|ARL2_BOVIN ADP-ribosylation factor-like protein 2 OS=Bos taurus GN=ARL2 PE=1
SV=1
Length = 184
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 56/98 (57%), Gaps = 7/98 (7%)
Query: 17 EFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLG 76
E +L+LG+D AGKTT+L+K G D I PT+G NI +E KL WD+G
Sbjct: 16 ELRLLMLGLDNAGKTTILKKFN-------GEDIDTISPTLGFNIKTLEHRGFKLNIWDVG 68
Query: 77 GQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTAL 114
GQ LRS W Y+E +++V+D+A R +D + L
Sbjct: 69 GQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQREL 106
>sp|P36404|ARL2_HUMAN ADP-ribosylation factor-like protein 2 OS=Homo sapiens GN=ARL2 PE=1
SV=4
Length = 184
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 56/98 (57%), Gaps = 7/98 (7%)
Query: 17 EFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLG 76
E +L+LG+D AGKTT+L+K G D I PT+G NI +E KL WD+G
Sbjct: 16 ELRLLMLGLDNAGKTTILKKFN-------GEDIDTISPTLGFNIKTLEHRGFKLNIWDVG 68
Query: 77 GQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTAL 114
GQ LRS W Y+E +++V+D+A R +D + L
Sbjct: 69 GQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQREL 106
>sp|Q54V47|ARFJ_DICDI ADP-ribosylation factor J OS=Dictyostelium discoideum GN=arrJ PE=3
SV=1
Length = 188
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 18/113 (15%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGL 58
+FSLF G K E +L++G+D AGK+TLL KLK V S +PT+G
Sbjct: 16 IFSLFEG-------KKETRILMIGLDGAGKSTLLYKLKLGDVVS---------TIPTIGF 59
Query: 59 NIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSK 111
N+ IE N + WD+GGQ +R +W+ YY ++AV+FV+D+ R ++ K
Sbjct: 60 NVETIEYKNLSMTVWDVGGQHKIRPLWKHYYHGSNAVIFVVDSTDRERMDEVK 112
>sp|P61210|ARF1_LOCMI ADP-ribosylation factor 1 OS=Locusta migratoria GN=ARF1 PE=2 SV=2
Length = 182
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGL 58
M ++F L+K +F K E +L++G+D AGKTT+L KLK + + +PT+G
Sbjct: 1 MGNVFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVT---------TIPTIGF 51
Query: 59 NIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTAL 114
N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L
Sbjct: 52 NVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREEL 107
>sp|P61209|ARF1_DROME ADP-ribosylation factor 1 OS=Drosophila melanogaster GN=Arf79F PE=2
SV=2
Length = 182
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGL 58
M ++F L+K +F K E +L++G+D AGKTT+L KLK + + +PT+G
Sbjct: 1 MGNVFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVT---------TIPTIGF 51
Query: 59 NIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTAL 114
N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L
Sbjct: 52 NVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREEL 107
>sp|Q06849|ARL2_DROME ADP-ribosylation factor-like protein 2 OS=Drosophila melanogaster
GN=Arf84F PE=2 SV=2
Length = 184
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 7/92 (7%)
Query: 17 EFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLG 76
E +L+LG+D AGKTT+L++ G P D I PT+G NI +E + L WD+G
Sbjct: 16 EMRILLLGLDNAGKTTILKRFN-------GEPIDTISPTLGFNIKTLEHNGYTLNMWDVG 68
Query: 77 GQPGLRSIWEKYYEEAHAVVFVIDAACPSRFE 108
GQ LRS W Y+E +V+V+D+A R E
Sbjct: 69 GQKSLRSYWRNYFESTDGLVWVVDSADRMRLE 100
>sp|Q7RVM2|ARF_NEUCR ADP-ribosylation factor OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=NCU08340 PE=3 SV=3
Length = 185
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 11/117 (9%)
Query: 2 FSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLN 59
S+F L+ +F K E +L++G+D AGKTT+L KLK V + + PT+G N
Sbjct: 5 LSIFGKLFDGLFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTI---------PTIGFN 55
Query: 60 IGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALGK 116
+ +E N + WD+GGQ +R +W Y++ ++FV+D+ R +++ L +
Sbjct: 56 VETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRVVEAREELQR 112
>sp|Q6P8C8|ARL8A_XENTR ADP-ribosylation factor-like protein 8A OS=Xenopus tropicalis
GN=arl8a PE=2 SV=1
Length = 186
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 9/117 (7%)
Query: 1 MFSLFYGL---WKYIFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVG 57
M +LF L +K +F K E + ++G+ +GKTT + + S G + ++PTVG
Sbjct: 1 MLALFNKLLDWFKALFWKEEMELTLVGLQYSGKTTFVNVIAS------GQFNEDMIPTVG 54
Query: 58 LNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTAL 114
N+ +I N + WD+GGQP RS+WE+Y A+V+++DAA + E SK L
Sbjct: 55 FNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQDKIEASKNEL 111
>sp|Q8VEH3|ARL8A_MOUSE ADP-ribosylation factor-like protein 8A OS=Mus musculus GN=Arl8a
PE=2 SV=1
Length = 186
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 9/117 (7%)
Query: 1 MFSLFYGL---WKYIFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVG 57
M +LF L +K +F K E + ++G+ +GKTT + + S G + ++PTVG
Sbjct: 1 MIALFNKLLDWFKALFWKEEMELTLVGLQYSGKTTFVNVIAS------GQFNEDMIPTVG 54
Query: 58 LNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTAL 114
N+ +I N + WD+GGQP RS+WE+Y A+V+++DAA + E SK L
Sbjct: 55 FNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNEL 111
>sp|P62332|ARF6_RAT ADP-ribosylation factor 6 OS=Rattus norvegicus GN=Arf6 PE=1 SV=2
Length = 175
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 12 IFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLV 71
IF E +L+LG+D AGKTT+L KLK S +PTVG N+ + N K
Sbjct: 8 IFGNKEMRILMLGLDAAGKTTILYKLKLGQSVT-------TIPTVGFNVETVTYKNVKFN 60
Query: 72 FWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALGK 116
WD+GGQ +R +W YY ++FV+D A R ++++ L +
Sbjct: 61 VWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHR 105
>sp|Q007T5|ARF6_PIG ADP-ribosylation factor 6 OS=Sus scrofa GN=ARF6 PE=2 SV=1
Length = 175
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 12 IFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLV 71
IF E +L+LG+D AGKTT+L KLK S +PTVG N+ + N K
Sbjct: 8 IFGNKEMRILMLGLDAAGKTTILYKLKLGQSVT-------TIPTVGFNVETVTYKNVKFN 60
Query: 72 FWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALGK 116
WD+GGQ +R +W YY ++FV+D A R ++++ L +
Sbjct: 61 VWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHR 105
>sp|P62331|ARF6_MOUSE ADP-ribosylation factor 6 OS=Mus musculus GN=Arf6 PE=1 SV=2
Length = 175
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 12 IFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLV 71
IF E +L+LG+D AGKTT+L KLK S +PTVG N+ + N K
Sbjct: 8 IFGNKEMRILMLGLDAAGKTTILYKLKLGQSVT-------TIPTVGFNVETVTYKNVKFN 60
Query: 72 FWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALGK 116
WD+GGQ +R +W YY ++FV+D A R ++++ L +
Sbjct: 61 VWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHR 105
>sp|P62330|ARF6_HUMAN ADP-ribosylation factor 6 OS=Homo sapiens GN=ARF6 PE=1 SV=2
Length = 175
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 12 IFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLV 71
IF E +L+LG+D AGKTT+L KLK S +PTVG N+ + N K
Sbjct: 8 IFGNKEMRILMLGLDAAGKTTILYKLKLGQSVT-------TIPTVGFNVETVTYKNVKFN 60
Query: 72 FWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALGK 116
WD+GGQ +R +W YY ++FV+D A R ++++ L +
Sbjct: 61 VWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHR 105
>sp|P26990|ARF6_CHICK ADP-ribosylation factor 6 OS=Gallus gallus GN=ARF6 PE=2 SV=3
Length = 175
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 12 IFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLV 71
IF E +L+LG+D AGKTT+L KLK S +PTVG N+ + N K
Sbjct: 8 IFGNKEMRILMLGLDAAGKTTILYKLKLGQSVT-------TIPTVGFNVETVTYKNVKFN 60
Query: 72 FWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALGK 116
WD+GGQ +R +W YY ++FV+D A R ++++ L +
Sbjct: 61 VWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHR 105
>sp|Q96BM9|ARL8A_HUMAN ADP-ribosylation factor-like protein 8A OS=Homo sapiens GN=ARL8A
PE=1 SV=1
Length = 186
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 9/117 (7%)
Query: 1 MFSLFYGL---WKYIFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVG 57
M +LF L +K +F K E + ++G+ +GKTT + + S G + ++PTVG
Sbjct: 1 MIALFNKLLDWFKALFWKEEMELTLVGLQYSGKTTFVNVIAS------GQFNEDMIPTVG 54
Query: 58 LNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTAL 114
N+ +I N + WD+GGQP RS+WE+Y A+V+++DAA + E SK L
Sbjct: 55 FNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNEL 111
>sp|O08697|ARL2_RAT ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus GN=Arl2
PE=1 SV=1
Length = 184
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 7/98 (7%)
Query: 17 EFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLG 76
+ +L+LG+D AGKTT+L+K G D I PT+G NI +E KL WD+G
Sbjct: 16 DVRLLMLGLDNAGKTTILKKFN-------GEDVDTISPTLGFNIKTLEHRGFKLNIWDVG 68
Query: 77 GQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTAL 114
GQ LRS W Y+E +++V+D+A R +D + L
Sbjct: 69 GQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQREL 106
>sp|Q10943|ARF12_CAEEL ADP-ribosylation factor 1-like 2 OS=Caenorhabditis elegans
GN=arf-1.2 PE=2 SV=2
Length = 181
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGL 58
M ++F L+K +F K E +L++G+D AGKTT+L KLK + + + PT+G
Sbjct: 1 MGNVFGSLFKGLFGKREMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGF 51
Query: 59 NIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTAL 114
N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L
Sbjct: 52 NVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREEL 107
>sp|Q61LA8|ARF12_CAEBR ADP-ribosylation factor 1-like 2 OS=Caenorhabditis briggsae
GN=arf-1.2 PE=3 SV=3
Length = 181
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGL 58
M ++F L+K +F K E +L++G+D AGKTT+L KLK + + + PT+G
Sbjct: 1 MGNVFGSLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGF 51
Query: 59 NIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTAL 114
N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L
Sbjct: 52 NVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREEL 107
>sp|Q54HK2|ARFF_DICDI ADP-ribosylation factor F OS=Dictyostelium discoideum GN=arrF PE=3
SV=1
Length = 190
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 65/114 (57%), Gaps = 14/114 (12%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNI 60
+FSLF G K +L++G+D AGK+TLL KLK + +V R +PT+G N+
Sbjct: 16 IFSLFEG-------KRNIRILMIGLDGAGKSTLLYKLK--FGDVI-----RTIPTIGFNV 61
Query: 61 GRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTAL 114
IE N + WD+GGQ +R++W +Y + +FV+D+ RF++ K +
Sbjct: 62 EIIEYKNLSMNVWDIGGQNNIRALWRQYDQRTDVFIFVVDSTDRERFDEVKQEI 115
>sp|Q54JJ3|ARFH_DICDI ADP-ribosylation factor H OS=Dictyostelium discoideum GN=arrH PE=3
SV=1
Length = 189
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 18/113 (15%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGL 58
+FSLF G K + +L++G+D AGK+TLL KLK + S V PT+G
Sbjct: 16 IFSLFEG-------KKQTRILMIGLDGAGKSTLLYKLKLGDIVSTV---------PTIGF 59
Query: 59 NIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSK 111
N+ IE N + WD+GGQ +R++W+ YY +A++FV+D+ R ++ K
Sbjct: 60 NVETIEYKNLSMTVWDVGGQYKIRALWKHYYHGTNAIIFVVDSTDRERMDEVK 112
>sp|Q5ZKQ8|ARL8A_CHICK ADP-ribosylation factor-like protein 8A OS=Gallus gallus GN=ARL8A
PE=2 SV=1
Length = 186
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 66/117 (56%), Gaps = 9/117 (7%)
Query: 1 MFSLFYGL---WKYIFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVG 57
M +LF L ++ +F K E + ++G+ +GKTT + + S G + ++PTVG
Sbjct: 1 MLALFNKLLDWFRALFWKEEMELTLVGLQYSGKTTFVNVIAS------GQFNEDMIPTVG 54
Query: 58 LNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTAL 114
N+ +I N + WD+GGQP RS+WE+Y A+V+++DAA + E SK L
Sbjct: 55 FNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNEL 111
>sp|Q54UF1|ARL2_DICDI ADP-ribosylation factor-like protein 2 OS=Dictyostelium discoideum
GN=arl2 PE=3 SV=1
Length = 184
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Query: 19 HVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQ 78
+L+LG+D AGKTT+L+K G I PT+G NI + KL WD+GGQ
Sbjct: 18 RILMLGLDNAGKTTILKKFN-------GEDISTISPTLGFNIQTLMYKEYKLNIWDIGGQ 70
Query: 79 PGLRSIWEKYYEEAHAVVFVIDAACPSRFEDS 110
LRS W YYEE AV++VID++ R +D
Sbjct: 71 KTLRSYWRNYYEENDAVIWVIDSSDIRRIDDC 102
>sp|Q0IIM2|ARL6_BOVIN ADP-ribosylation factor-like protein 6 OS=Bos taurus GN=ARL6 PE=1
SV=1
Length = 186
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 5/102 (4%)
Query: 13 FTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVF 72
K E HVL LG+D +GKTT++ KLK SN + IVPT+G +I + + S+
Sbjct: 13 LKKKEVHVLCLGLDNSGKTTIINKLKP--SNAQS---QDIVPTIGFSIQKFKSSSLSFTV 67
Query: 73 WDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTAL 114
+D+ GQ R++WE YY+E A++FVID++ R +K L
Sbjct: 68 FDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDKLRMVVAKEEL 109
>sp|Q25761|ARF1_PLAFO ADP-ribosylation factor 1 OS=Plasmodium falciparum (isolate NF54)
GN=ARF1 PE=2 SV=2
Length = 181
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 11/116 (9%)
Query: 8 LWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEV 65
L+ +F K + +L++G+D AGKTT+L K+K V + + PT+G N+ +E
Sbjct: 8 LFNRLFQKKDVRILMVGLDAAGKTTILYKVKLGEVVTTI---------PTIGFNVETVEF 58
Query: 66 SNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALGKKGSSE 121
N WD+GGQ +R +W YY ++FV+D+ R +D++ L + + E
Sbjct: 59 RNISFTVWDVGGQDKIRPLWRHYYSNTDGLIFVVDSNDRERIDDAREGLHRMINEE 114
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.139 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,484,400
Number of Sequences: 539616
Number of extensions: 1815433
Number of successful extensions: 9048
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 428
Number of HSP's that attempted gapping in prelim test: 8220
Number of HSP's gapped (non-prelim): 1005
length of query: 121
length of database: 191,569,459
effective HSP length: 88
effective length of query: 33
effective length of database: 144,083,251
effective search space: 4754747283
effective search space used: 4754747283
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)