BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033353
(121 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224106463|ref|XP_002314174.1| predicted protein [Populus trichocarpa]
gi|222850582|gb|EEE88129.1| predicted protein [Populus trichocarpa]
Length = 116
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/121 (65%), Positives = 90/121 (74%), Gaps = 5/121 (4%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
MGVFT+VCR +G EWS KQI GD+EASA+ST+ELQRKLVQ++LSADSSGGVQSSFS VT
Sbjct: 1 MGVFTFVCRCSGNEWSAKQIAEGDIEASASSTFELQRKLVQSALSADSSGGVQSSFSYVT 60
Query: 61 PTSAVFQVIIGGAVGSGFIGGGAAASAPSGGGGAAAEAPAAEEKKEEKEESDEDMGFSLF 120
P+SAVFQVIIGG G G AA A E+KKEE+ ESD+DMGFSLF
Sbjct: 61 PSSAVFQVIIGGGCGG-----AFFGGGGGGAAAAAEAPAAEEKKKEEEPESDDDMGFSLF 115
Query: 121 D 121
D
Sbjct: 116 D 116
>gi|118485567|gb|ABK94635.1| unknown [Populus trichocarpa]
Length = 124
Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/124 (67%), Positives = 96/124 (77%), Gaps = 3/124 (2%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
MGVFT+VCR +G EWS KQI GD+EASA+ST+ELQRKLVQ++LSADSSGGVQSSFS VT
Sbjct: 1 MGVFTFVCRCSGNEWSAKQIAEGDIEASASSTFELQRKLVQSALSADSSGGVQSSFSYVT 60
Query: 61 PTSAVFQVII---GGAVGSGFIGGGAAASAPSGGGGAAAEAPAAEEKKEEKEESDEDMGF 117
P+SAVFQVII G G GGGAAA+ G AA A E+KKEE+ ESD+DMGF
Sbjct: 61 PSSAVFQVIIGGGCGGAFFGGGGGGAAAAPAGGAAAAAEAPAAEEKKKEEEPESDDDMGF 120
Query: 118 SLFD 121
SLFD
Sbjct: 121 SLFD 124
>gi|118481350|gb|ABK92618.1| unknown [Populus trichocarpa]
Length = 124
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/124 (63%), Positives = 93/124 (75%), Gaps = 3/124 (2%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
MGVFT+VCR + EWS KQI G++EASA+ST+ELQRKLVQ++LSADSSG VQSSFS VT
Sbjct: 1 MGVFTFVCRSSSNEWSAKQISDGNIEASASSTFELQRKLVQSALSADSSGAVQSSFSYVT 60
Query: 61 PTSAVFQVII---GGAVGSGFIGGGAAASAPSGGGGAAAEAPAAEEKKEEKEESDEDMGF 117
P+SAVFQV+I G G GGGA A+ G AA A E+KKEE+ ESD+DMGF
Sbjct: 61 PSSAVFQVVIGGSAGGAFFGGGGGGAVAAPAGGATAAAEAPAAEEKKKEEEPESDDDMGF 120
Query: 118 SLFD 121
SLFD
Sbjct: 121 SLFD 124
>gi|297796629|ref|XP_002866199.1| hypothetical protein ARALYDRAFT_918901 [Arabidopsis lyrata subsp.
lyrata]
gi|297312034|gb|EFH42458.1| hypothetical protein ARALYDRAFT_918901 [Arabidopsis lyrata subsp.
lyrata]
Length = 120
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/70 (82%), Positives = 65/70 (92%), Gaps = 1/70 (1%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
MGVFT+VC+ GGEW+ KQ EG DLEASA+STY+LQRKLVQT+LSADSSGGVQSSFSLV+
Sbjct: 1 MGVFTFVCKSKGGEWTAKQHEG-DLEASASSTYDLQRKLVQTALSADSSGGVQSSFSLVS 59
Query: 61 PTSAVFQVII 70
PTSAVFQVII
Sbjct: 60 PTSAVFQVII 69
>gi|162463825|ref|NP_001105389.1| 60S acidic ribosomal protein P3 [Zea mays]
gi|6226016|sp|O24413.3|RLA3_MAIZE RecName: Full=60S acidic ribosomal protein P3; AltName:
Full=P1/P2-like; AltName: Full=P3A
gi|2431767|gb|AAB71078.1| acidic ribosomal protein P3a [Zea mays]
Length = 120
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/121 (61%), Positives = 92/121 (76%), Gaps = 1/121 (0%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
MGV+T+VCR NGGEW+ KQ G++EASAA+ YELQR+LV + +ADS GVQSSFS+VT
Sbjct: 1 MGVYTFVCRNNGGEWTAKQ-HSGEIEASAATPYELQRRLVAAASAADSRYGVQSSFSMVT 59
Query: 61 PTSAVFQVIIGGAVGSGFIGGGAAASAPSGGGGAAAEAPAAEEKKEEKEESDEDMGFSLF 120
P+SAVFQVI+G G + G + GGAAAEAP E+K+EEKEESD+DMGFSLF
Sbjct: 60 PSSAVFQVIVGAVGGGAMMVSGGGGGGAAASGGAAAEAPKEEKKEEEKEESDDDMGFSLF 119
Query: 121 D 121
D
Sbjct: 120 D 120
>gi|15242089|ref|NP_200539.1| 60S acidic ribosomal protein P3-2 [Arabidopsis thaliana]
gi|75264272|sp|Q9LVC9.1|RLA32_ARATH RecName: Full=60S acidic ribosomal protein P3-2
gi|8777362|dbj|BAA96952.1| 60S acidic ribosomal protein P3 [Arabidopsis thaliana]
gi|21617903|gb|AAM66953.1| 60S acidic ribosomal protein P3 [Arabidopsis thaliana]
gi|98961057|gb|ABF59012.1| At5g57290 [Arabidopsis thaliana]
gi|332009494|gb|AED96877.1| 60S acidic ribosomal protein P3-2 [Arabidopsis thaliana]
Length = 120
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/70 (78%), Positives = 64/70 (91%), Gaps = 1/70 (1%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
MGVF++VC+ GGEW+ KQ EG DLEASA+STY+LQRKLVQT+LSADSSGGVQSSFSLV+
Sbjct: 1 MGVFSFVCKSKGGEWTAKQHEG-DLEASASSTYDLQRKLVQTALSADSSGGVQSSFSLVS 59
Query: 61 PTSAVFQVII 70
PTSAVF V+I
Sbjct: 60 PTSAVFVVVI 69
>gi|15236029|ref|NP_194319.1| 60S acidic ribosomal protein P3-1 [Arabidopsis thaliana]
gi|75266431|sp|Q9SVZ6.1|RLA31_ARATH RecName: Full=60S acidic ribosomal protein P3-1
gi|4539307|emb|CAB39610.1| putative acidic ribosomal protein [Arabidopsis thaliana]
gi|7269440|emb|CAB79444.1| putative acidic ribosomal protein [Arabidopsis thaliana]
gi|17979039|gb|AAL49787.1| putative acidic ribosomal protein [Arabidopsis thaliana]
gi|20259603|gb|AAM14158.1| putative acidic ribosomal protein [Arabidopsis thaliana]
gi|332659730|gb|AEE85130.1| 60S acidic ribosomal protein P3-1 [Arabidopsis thaliana]
Length = 119
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/70 (80%), Positives = 63/70 (90%), Gaps = 1/70 (1%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
MGVFT+VC+ GG WS KQ EG +LE+SA+STYELQRKLVQ SLSADSSGGVQSSFSLV+
Sbjct: 1 MGVFTFVCKNGGGAWSAKQHEG-ELESSASSTYELQRKLVQVSLSADSSGGVQSSFSLVS 59
Query: 61 PTSAVFQVII 70
PTSAVFQVI+
Sbjct: 60 PTSAVFQVIV 69
>gi|147790496|emb|CAN65458.1| hypothetical protein VITISV_010073 [Vitis vinifera]
Length = 121
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/122 (75%), Positives = 104/122 (85%), Gaps = 2/122 (1%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
MGVFT+VCR +G EW+ KQ+ GDLE SAASTY+LQRK VQ++LSADSSGGVQSSFS VT
Sbjct: 1 MGVFTFVCRSSGKEWTAKQM-NGDLEESAASTYDLQRKCVQSALSADSSGGVQSSFSYVT 59
Query: 61 PTSAVFQVII-GGAVGSGFIGGGAAASAPSGGGGAAAEAPAAEEKKEEKEESDEDMGFSL 119
P+S VFQVI+ GG G F GGGAAA+APSGGG AA+AP AEEKKEEKEESD+DMGFSL
Sbjct: 60 PSSGVFQVIVGGGGGGGFFGGGGAAAAAPSGGGAPAADAPPAEEKKEEKEESDDDMGFSL 119
Query: 120 FD 121
FD
Sbjct: 120 FD 121
>gi|225446287|ref|XP_002269613.1| PREDICTED: 60S acidic ribosomal protein P3-2 [Vitis vinifera]
gi|296090308|emb|CBI40127.3| unnamed protein product [Vitis vinifera]
Length = 121
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/122 (74%), Positives = 104/122 (85%), Gaps = 2/122 (1%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
MGVFT+VCR +G EW+ KQ+ GDLE SAASTY+LQR+ VQ++LSADSSGGVQSSFS VT
Sbjct: 1 MGVFTFVCRSSGKEWTAKQM-NGDLEESAASTYDLQRRCVQSALSADSSGGVQSSFSYVT 59
Query: 61 PTSAVFQVII-GGAVGSGFIGGGAAASAPSGGGGAAAEAPAAEEKKEEKEESDEDMGFSL 119
P+SAV QVI+ GG G F GGGAAA+APSGGG AA+AP AEEKKEEKEESD+DMGFSL
Sbjct: 60 PSSAVIQVIVGGGGGGGFFGGGGAAAAAPSGGGAPAADAPPAEEKKEEKEESDDDMGFSL 119
Query: 120 FD 121
FD
Sbjct: 120 FD 121
>gi|297799408|ref|XP_002867588.1| hypothetical protein ARALYDRAFT_492228 [Arabidopsis lyrata subsp.
lyrata]
gi|297313424|gb|EFH43847.1| hypothetical protein ARALYDRAFT_492228 [Arabidopsis lyrata subsp.
lyrata]
Length = 119
Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/70 (78%), Positives = 63/70 (90%), Gaps = 1/70 (1%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
MGVFT+VC+ GG W+ KQ EG +LEASA+STYELQRKLVQ +LSADSSGGVQSSFSLV+
Sbjct: 1 MGVFTFVCKNGGGAWTAKQHEG-ELEASASSTYELQRKLVQAALSADSSGGVQSSFSLVS 59
Query: 61 PTSAVFQVII 70
PTSAVFQVI+
Sbjct: 60 PTSAVFQVIV 69
>gi|186532532|ref|NP_001119451.1| 60S acidic ribosomal protein P3-2 [Arabidopsis thaliana]
gi|332009496|gb|AED96879.1| 60S acidic ribosomal protein P3-2 [Arabidopsis thaliana]
Length = 119
Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/69 (79%), Positives = 63/69 (91%), Gaps = 1/69 (1%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
MGVF++VC+ GGEW+ KQ EG DLEASA+STY+LQRKLVQT+LSADSSGGVQSSFSLV+
Sbjct: 1 MGVFSFVCKSKGGEWTAKQHEG-DLEASASSTYDLQRKLVQTALSADSSGGVQSSFSLVS 59
Query: 61 PTSAVFQVI 69
PTSAVF VI
Sbjct: 60 PTSAVFVVI 68
>gi|449461181|ref|XP_004148320.1| PREDICTED: 60S acidic ribosomal protein P3-2-like isoform 1
[Cucumis sativus]
gi|449461183|ref|XP_004148321.1| PREDICTED: 60S acidic ribosomal protein P3-2-like isoform 2
[Cucumis sativus]
gi|449507401|ref|XP_004163021.1| PREDICTED: 60S acidic ribosomal protein P3-2-like isoform 1
[Cucumis sativus]
gi|449507403|ref|XP_004163022.1| PREDICTED: 60S acidic ribosomal protein P3-2-like isoform 2
[Cucumis sativus]
gi|449507406|ref|XP_004163023.1| PREDICTED: 60S acidic ribosomal protein P3-2-like isoform 3
[Cucumis sativus]
gi|449507410|ref|XP_004163024.1| PREDICTED: 60S acidic ribosomal protein P3-2-like isoform 4
[Cucumis sativus]
Length = 121
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/122 (67%), Positives = 96/122 (78%), Gaps = 2/122 (1%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
MGVFT+VCR +GG+W+ Q G DLE SA STYELQRKLVQ++LS DSSGGVQSSFS +T
Sbjct: 1 MGVFTFVCRSSGGKWTANQYSG-DLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFIT 59
Query: 61 PTSAVFQVIIGGAVGSGFIGGGAAASAPSGGGGAAAEAPAAEEKKEEKEES-DEDMGFSL 119
P+SAVFQVI+GG G GF GG AA+AP+GG AA AE+K+E KEES DED+G SL
Sbjct: 60 PSSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPAEKKEEVKEESDDEDLGLSL 119
Query: 120 FD 121
FD
Sbjct: 120 FD 121
>gi|194708144|gb|ACF88156.1| unknown [Zea mays]
gi|195622750|gb|ACG33205.1| 60S acidic ribosomal protein P3 [Zea mays]
gi|195654339|gb|ACG46637.1| 60S acidic ribosomal protein P3 [Zea mays]
gi|413934792|gb|AFW69343.1| hypothetical protein ZEAMMB73_396059 [Zea mays]
Length = 120
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/121 (61%), Positives = 93/121 (76%), Gaps = 1/121 (0%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
MGV+T+VCR NGGEW+ KQ G++EASAA+ YELQR+LV + +ADS+ GVQSSFS+VT
Sbjct: 1 MGVYTFVCRNNGGEWTAKQ-HSGEIEASAATPYELQRRLVAAASAADSAYGVQSSFSMVT 59
Query: 61 PTSAVFQVIIGGAVGSGFIGGGAAASAPSGGGGAAAEAPAAEEKKEEKEESDEDMGFSLF 120
P+SAVFQVI+G G + G + GGAAAEAP E+K+EEKEESD+DMGFSLF
Sbjct: 60 PSSAVFQVIVGAVGGGAMMVSGGGGGGAAASGGAAAEAPKEEKKEEEKEESDDDMGFSLF 119
Query: 121 D 121
D
Sbjct: 120 D 120
>gi|356525439|ref|XP_003531332.1| PREDICTED: 60S acidic ribosomal protein P3-like [Glycine max]
Length = 120
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/121 (61%), Positives = 91/121 (75%), Gaps = 1/121 (0%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
MGVFT+V RK+G EWS KQ GD+EASA ST++LQRKLVQ +L+ DSSGGVQSSFS V+
Sbjct: 1 MGVFTFVVRKSGSEWSAKQ-HSGDIEASADSTFDLQRKLVQAALAVDSSGGVQSSFSPVS 59
Query: 61 PTSAVFQVIIGGAVGSGFIGGGAAASAPSGGGGAAAEAPAAEEKKEEKEESDEDMGFSLF 120
PTSAVFQVI+GGAV G GG AA+ G A A A +++++ +EESD+DMG LF
Sbjct: 60 PTSAVFQVIVGGAVFVGGGGGAVAAAPAGGAAAADAAPAAEKKEEKVEEESDDDMGLGLF 119
Query: 121 D 121
D
Sbjct: 120 D 120
>gi|351726498|ref|NP_001235337.1| uncharacterized protein LOC100527385 [Glycine max]
gi|255632230|gb|ACU16473.1| unknown [Glycine max]
Length = 125
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/69 (75%), Positives = 59/69 (85%), Gaps = 1/69 (1%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
MGVFT+V RK+G EWS KQ GD+EASA STY+LQRKLVQ +L+ DSSGGVQSSFS V+
Sbjct: 1 MGVFTFVVRKSGAEWSAKQ-HSGDIEASADSTYDLQRKLVQAALAVDSSGGVQSSFSPVS 59
Query: 61 PTSAVFQVI 69
PTSAVFQVI
Sbjct: 60 PTSAVFQVI 68
>gi|242096938|ref|XP_002438959.1| hypothetical protein SORBIDRAFT_10g028990 [Sorghum bicolor]
gi|241917182|gb|EER90326.1| hypothetical protein SORBIDRAFT_10g028990 [Sorghum bicolor]
Length = 119
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/121 (64%), Positives = 93/121 (76%), Gaps = 2/121 (1%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
MGV+T+VCR GGEW+ KQ G+LEASAA+ Y LQR LV + +ADS+ GVQSSFS+VT
Sbjct: 1 MGVYTFVCRNTGGEWTAKQ-HSGELEASAATPYALQRALVAAASAADSASGVQSSFSMVT 59
Query: 61 PTSAVFQVIIGGAVGSGFIGGGAAASAPSGGGGAAAEAPAAEEKKEEKEESDEDMGFSLF 120
PTSAVFQVI+ GAVG G + A + GGAAAEAP E+K+EEKEESD+DMGFSLF
Sbjct: 60 PTSAVFQVIV-GAVGGGAMMVSGGGGAAAASGGAAAEAPKEEKKEEEKEESDDDMGFSLF 118
Query: 121 D 121
D
Sbjct: 119 D 119
>gi|334188456|ref|NP_001119450.2| 60S acidic ribosomal protein P3-2 [Arabidopsis thaliana]
gi|332009495|gb|AED96878.1| 60S acidic ribosomal protein P3-2 [Arabidopsis thaliana]
Length = 89
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 58/63 (92%), Gaps = 1/63 (1%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
MGVF++VC+ GGEW+ KQ EG DLEASA+STY+LQRKLVQT+LSADSSGGVQSSFSLV+
Sbjct: 1 MGVFSFVCKSKGGEWTAKQHEG-DLEASASSTYDLQRKLVQTALSADSSGGVQSSFSLVS 59
Query: 61 PTS 63
PTS
Sbjct: 60 PTS 62
>gi|255573582|ref|XP_002527715.1| 60S acidic ribosomal protein P3, putative [Ricinus communis]
gi|223532905|gb|EEF34674.1| 60S acidic ribosomal protein P3, putative [Ricinus communis]
Length = 122
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/123 (59%), Positives = 87/123 (70%), Gaps = 3/123 (2%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
MGV+T+VCR++ GEWS KQ+ GDLEASAA +ELQRKLV + S+DSSGGVQSSFS VT
Sbjct: 1 MGVYTFVCRQSDGEWSAKQL-SGDLEASAAVPFELQRKLVNLAASSDSSGGVQSSFSYVT 59
Query: 61 PTSAVFQV--IIGGAVGSGFIGGGAAASAPSGGGGAAAEAPAAEEKKEEKEESDEDMGFS 118
P+SAVFQV GG G G AAA+ G AA ++K+E EESD+DMGFS
Sbjct: 60 PSSAVFQVIIGGGGGGGFIGGGAAAAAAPAGGAAAAAEAPAEEKKKEEPAEESDDDMGFS 119
Query: 119 LFD 121
LFD
Sbjct: 120 LFD 122
>gi|255638005|gb|ACU19318.1| unknown [Glycine max]
Length = 119
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/69 (72%), Positives = 59/69 (85%), Gaps = 1/69 (1%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
MGVFT+V RK+G EWS KQ GD+EASA ST++LQRKLVQ +L+ DSSGGVQSSFS V+
Sbjct: 1 MGVFTFVVRKSGSEWSAKQ-HSGDIEASADSTFDLQRKLVQAALAVDSSGGVQSSFSPVS 59
Query: 61 PTSAVFQVI 69
PTSAVF+VI
Sbjct: 60 PTSAVFRVI 68
>gi|154269254|gb|ABS72187.1| acidic ribosomal protein P3 [Corchorus olitorius]
Length = 119
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/121 (74%), Positives = 101/121 (83%), Gaps = 2/121 (1%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
MGV+T+VC+ + GEW+ KQ EG +LE SA STYELQRKLVQ + +ADSSGGV SSFSL+T
Sbjct: 1 MGVYTFVCKSSAGEWTAKQFEG-ELEGSAPSTYELQRKLVQAAAAADSSGGVCSSFSLIT 59
Query: 61 PTSAVFQVIIGGAVGSGFIGGGAAASAPSGGGGAAAEAPAAEEKKEEKEESDEDMGFSLF 120
PTSAVFQVIIGG G G GG AA+APSGG AAEAPAAEEKKEEKEESD+DMGFSLF
Sbjct: 60 PTSAVFQVIIGGGGGGG-FIGGGAAAAPSGGAAPAAEAPAAEEKKEEKEESDDDMGFSLF 118
Query: 121 D 121
D
Sbjct: 119 D 119
>gi|38503544|gb|AAR22559.1| 60S acidic ribosomal protein P3 [Lactuca saligna]
Length = 119
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 57/70 (81%), Gaps = 1/70 (1%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
MGVFT+VC+ +GG+W+ KQ++ GDLE SA STY LQR LVQ + S DSSGG+QSSFS V
Sbjct: 9 MGVFTFVCKSSGGKWTAKQLK-GDLEGSADSTYALQRSLVQAAYSCDSSGGIQSSFSYVL 67
Query: 61 PTSAVFQVII 70
P SAVFQVII
Sbjct: 68 PDSAVFQVII 77
>gi|38503536|gb|AAR22555.1| 60S acidic ribosomal protein P3 [Lactuca sativa]
Length = 112
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 57/70 (81%), Gaps = 1/70 (1%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
MGVFT+VC+ +GG+W+ KQ++G DLE SA STY LQR LVQ + S DSSGG+QSSFS V
Sbjct: 1 MGVFTFVCKSSGGKWTAKQLKG-DLEGSADSTYALQRSLVQAAYSCDSSGGIQSSFSYVL 59
Query: 61 PTSAVFQVII 70
P SAVFQVII
Sbjct: 60 PDSAVFQVII 69
>gi|38503547|gb|AAR22560.1| 60S acidic ribosomal protein P3 [Lactuca saligna]
Length = 119
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 57/70 (81%), Gaps = 1/70 (1%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
MGVFT+VC+ +GG+W+ KQ++ GDLE SA STY LQR LVQ + S DSSGG+QSSFS V
Sbjct: 9 MGVFTFVCKSSGGKWTAKQLK-GDLEGSADSTYALQRSLVQAAYSCDSSGGIQSSFSYVL 67
Query: 61 PTSAVFQVII 70
P SAVFQVII
Sbjct: 68 PDSAVFQVII 77
>gi|326534206|dbj|BAJ89453.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 119
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 88/121 (72%), Gaps = 2/121 (1%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
MGVFT+VCR +G EWS KQ G+LEASAA+ Y+LQR+LV + + D SGGVQSSF++V+
Sbjct: 1 MGVFTFVCRDSGAEWSAKQ-HKGELEASAATPYDLQRQLVSAACAEDKSGGVQSSFTMVS 59
Query: 61 PTSAVFQVIIGGAVGSGFIGGGAAASAPSGGGGAAAEAPAAEEKKEEKEESDEDMGFSLF 120
P SA+FQV+IGGA GG AA +A SGG A A ++++E++E D D+GFSLF
Sbjct: 60 PNSAIFQVVIGGASAGPIGGGAAAGAAASGGAAAEAPKAEEKKEEEKEESED-DLGFSLF 118
Query: 121 D 121
D
Sbjct: 119 D 119
>gi|388490706|gb|AFK33419.1| unknown [Lotus japonicus]
Length = 121
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/69 (68%), Positives = 57/69 (82%), Gaps = 1/69 (1%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
MGVFT+V R +GG+W KQ GG +EASA ST+ LQRKL+Q +L+ DSSGGVQSS+S V+
Sbjct: 1 MGVFTFVLRNSGGDWFAKQHSGG-IEASADSTFALQRKLIQAALAVDSSGGVQSSYSPVS 59
Query: 61 PTSAVFQVI 69
PTSAVFQVI
Sbjct: 60 PTSAVFQVI 68
>gi|38503542|gb|AAR22558.1| 60S acidic ribosomal protein P3 [Lactuca serriola]
Length = 110
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Query: 3 VFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVTPT 62
VFT+VC+ +GG+W+ KQ++G DLE SA STY LQR LVQ + S DSSGG+QSSFS V P
Sbjct: 1 VFTFVCKSSGGKWTAKQLKG-DLEGSADSTYALQRSLVQAAYSCDSSGGIQSSFSYVLPD 59
Query: 63 SAVFQVII 70
SAVFQVII
Sbjct: 60 SAVFQVII 67
>gi|226502240|ref|NP_001147388.1| 60S acidic ribosomal protein P3 [Zea mays]
gi|195610888|gb|ACG27274.1| 60S acidic ribosomal protein P3 [Zea mays]
Length = 120
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/122 (63%), Positives = 95/122 (77%), Gaps = 3/122 (2%)
Query: 1 MGVFTYVCRK-NGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLV 59
MGV+T+VCR GGEW+ KQ G++EASAA+ YELQR+LV + +ADS+ GVQSSFS+V
Sbjct: 1 MGVYTFVCRSAGGGEWTAKQ-HSGEMEASAATPYELQRRLVAAASAADSASGVQSSFSMV 59
Query: 60 TPTSAVFQVIIGGAVGSGFIGGGAAASAPSGGGGAAAEAPAAEEKKEEKEESDEDMGFSL 119
TP+SAVFQVI+GG GGG +A + GGAAAEAP E+K+EEKEESD+DMGFSL
Sbjct: 60 TPSSAVFQVIVGGGAMMV-SGGGGGGAAAAASGGAAAEAPKEEKKEEEKEESDDDMGFSL 118
Query: 120 FD 121
FD
Sbjct: 119 FD 120
>gi|413943208|gb|AFW75857.1| 60S acidic ribosomal protein P3 [Zea mays]
Length = 120
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/122 (62%), Positives = 96/122 (78%), Gaps = 3/122 (2%)
Query: 1 MGVFTYVCRK-NGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLV 59
MGV+T+VCR GGEW+ KQ G++EASAA+ YELQR+LV ++ +ADS+ GVQSSFS+V
Sbjct: 1 MGVYTFVCRSAGGGEWTAKQ-HSGEIEASAATPYELQRRLVASASAADSASGVQSSFSMV 59
Query: 60 TPTSAVFQVIIGGAVGSGFIGGGAAASAPSGGGGAAAEAPAAEEKKEEKEESDEDMGFSL 119
TP+SAVFQVI+GG GGG ++ + GGAAAEAP E+K+EEKEESD+DMGFSL
Sbjct: 60 TPSSAVFQVIVGGGAMMV-SGGGGGGASAAASGGAAAEAPKEEKKEEEKEESDDDMGFSL 118
Query: 120 FD 121
FD
Sbjct: 119 FD 120
>gi|115435478|ref|NP_001042497.1| Os01g0231700 [Oryza sativa Japonica Group]
gi|56783875|dbj|BAD81287.1| putative acidic ribosomal protein P3a [Oryza sativa Japonica Group]
gi|113532028|dbj|BAF04411.1| Os01g0231700 [Oryza sativa Japonica Group]
gi|125525035|gb|EAY73149.1| hypothetical protein OsI_01022 [Oryza sativa Indica Group]
gi|215741557|dbj|BAG98052.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222618043|gb|EEE54175.1| hypothetical protein OsJ_00993 [Oryza sativa Japonica Group]
Length = 119
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/121 (59%), Positives = 94/121 (77%), Gaps = 2/121 (1%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
MGV+T+VCR +G EW+ KQ++G +LEASAA+ YELQR+LV + +ADS+ GVQSSF++V+
Sbjct: 1 MGVYTFVCRSSGEEWTAKQLKG-ELEASAATPYELQRRLVAAASAADSAAGVQSSFAMVS 59
Query: 61 PTSAVFQVIIGGAVGSGFIGGGAAASAPSGGGGAAAEAPAAEEKKEEKEESDEDMGFSLF 120
P+SAVFQVIIG G GGAAA + GG AA A E+K+EEKEES++D+GFSLF
Sbjct: 60 PSSAVFQVIIGAVGGGA-AIGGAAAGGAAAGGAAAEAPKAEEKKEEEKEESEDDLGFSLF 118
Query: 121 D 121
D
Sbjct: 119 D 119
>gi|357123632|ref|XP_003563513.1| PREDICTED: 60S acidic ribosomal protein P3-like [Brachypodium
distachyon]
Length = 120
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/121 (60%), Positives = 93/121 (76%), Gaps = 1/121 (0%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
MGV+T+VCR +GGEW+ KQ G+LEASAA+TY+L R+LV + +ADSS GVQSSF+ V+
Sbjct: 1 MGVYTFVCRSSGGEWTAKQ-HKGELEASAATTYDLHRQLVAAASAADSSAGVQSSFTAVS 59
Query: 61 PTSAVFQVIIGGAVGSGFIGGGAAASAPSGGGGAAAEAPAAEEKKEEKEESDEDMGFSLF 120
PTSA+ QVIIG G +GG AA AP+ GG AA A E+K+EEKEES++D+GFSLF
Sbjct: 60 PTSAICQVIIGAVGGGAMVGGPAAGGAPASGGAAAEAPKAEEKKEEEKEESEDDLGFSLF 119
Query: 121 D 121
D
Sbjct: 120 D 120
>gi|168054812|ref|XP_001779823.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668735|gb|EDQ55336.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 119
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/122 (57%), Positives = 81/122 (66%), Gaps = 4/122 (3%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEG-GDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLV 59
M VFT++ +K+G WS KQ G DLEAS+AST+ELQRKL +L+ SG V SSFSL+
Sbjct: 1 MAVFTFIVKKSGDTWSAKQHGGEADLEASSASTWELQRKLTNLALTTAGSGAVSSSFSLI 60
Query: 60 TPTSAVFQVIIGGAVGSGFIGGGAAASAPSGGGGAAAEAPAAEEKKEEKEESDEDMGFSL 119
TP S V QVI+GG G AA A SGG A A EEK EEKEESD+DMGFSL
Sbjct: 61 TPESGVAQVIVGGGGGG---FSAGAAPAASGGAAAPAAEEKKEEKVEEKEESDDDMGFSL 117
Query: 120 FD 121
FD
Sbjct: 118 FD 119
>gi|168042635|ref|XP_001773793.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674908|gb|EDQ61410.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 120
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 84/123 (68%), Gaps = 5/123 (4%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGG--DLEASAASTYELQRKLVQTSLSADSSGGVQSSFSL 58
M VFT++ +K+G W+ KQ GG +LEAS+AST+ELQRKL +L+ SG + SSFSL
Sbjct: 1 MAVFTFIVKKSGDSWTAKQ-HGGEANLEASSASTWELQRKLSNLALTTAGSGAISSSFSL 59
Query: 59 VTPTSAVFQVIIGGAVGSGFIGGGAAASAPSGGGGAAAEAPAAEEKKEEKEESDEDMGFS 118
+TP S V QV+IGG G GF +A A SGG A A EEK EEKEESD+DMGFS
Sbjct: 60 ITPDSGVAQVVIGGGGGGGF--SAGSAPAASGGAAAPAAEEKKEEKVEEKEESDDDMGFS 117
Query: 119 LFD 121
LFD
Sbjct: 118 LFD 120
>gi|302797543|ref|XP_002980532.1| hypothetical protein SELMODRAFT_112966 [Selaginella moellendorffii]
gi|300151538|gb|EFJ18183.1| hypothetical protein SELMODRAFT_112966 [Selaginella moellendorffii]
Length = 120
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 74/121 (61%), Gaps = 1/121 (0%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
M VFT+VC+ GG WS KQ GGDLE SAA+ ELQ+++ +L + +G V F+L+T
Sbjct: 1 MAVFTFVCKHTGGSWSAKQ-RGGDLEGSAANPLELQKQMRDLALQSAGAGAVSVDFALIT 59
Query: 61 PTSAVFQVIIGGAVGSGFIGGGAAASAPSGGGGAAAEAPAAEEKKEEKEESDEDMGFSLF 120
P++ V QVI+GG G G A A G AA E+K+E++ DEDMGFSLF
Sbjct: 60 PSAGVLQVIVGGGAGGAAFASGGGAPAAGGAAAAAPAPAEEEKKEEKEASEDEDMGFSLF 119
Query: 121 D 121
D
Sbjct: 120 D 120
>gi|302790073|ref|XP_002976804.1| hypothetical protein SELMODRAFT_105823 [Selaginella moellendorffii]
gi|300155282|gb|EFJ21914.1| hypothetical protein SELMODRAFT_105823 [Selaginella moellendorffii]
Length = 120
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 74/121 (61%), Gaps = 1/121 (0%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
M VFT+VC+ GG W+ KQ GGDLE SAA+ ELQ+++ +L + +G V F+L+T
Sbjct: 1 MAVFTFVCKHTGGSWNAKQ-RGGDLEGSAANPLELQKQMRDLALQSAGAGAVSVDFALIT 59
Query: 61 PTSAVFQVIIGGAVGSGFIGGGAAASAPSGGGGAAAEAPAAEEKKEEKEESDEDMGFSLF 120
P++ V QVI+GG G G A A G AA E+K+E++ DEDMGFSLF
Sbjct: 60 PSAGVLQVIVGGGAGGAAFASGGGAPAAGGAAAAAPAPAEEEKKEEKEASEDEDMGFSLF 119
Query: 121 D 121
D
Sbjct: 120 D 120
>gi|38503540|gb|AAR22557.1| 60S acidic ribosomal protein P3 [Lactuca sativa]
Length = 101
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Query: 11 NGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVTPTSAVFQVII 70
+GG+W+ KQ++G DLE SA STY LQR LVQ + S DSSGG+QSSFS V P SAVFQVII
Sbjct: 1 SGGKWTAKQLKG-DLEGSADSTYALQRSLVQAAYSCDSSGGIQSSFSYVLPDSAVFQVII 59
>gi|116782740|gb|ABK22637.1| unknown [Picea sitchensis]
gi|116784021|gb|ABK23183.1| unknown [Picea sitchensis]
gi|116788853|gb|ABK25026.1| unknown [Picea sitchensis]
gi|116790966|gb|ABK25806.1| unknown [Picea sitchensis]
gi|148908701|gb|ABR17458.1| unknown [Picea sitchensis]
gi|224286349|gb|ACN40882.1| unknown [Picea sitchensis]
Length = 121
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/122 (64%), Positives = 95/122 (77%), Gaps = 2/122 (1%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
MGV+T++C+ +GGEW+ KQ G DLE SAAST++LQR+LV +L ++ SG V SSFS V+
Sbjct: 1 MGVYTFICKSSGGEWNAKQYSG-DLEGSAASTFDLQRQLVNVALRSEGSGPVSSSFSYVS 59
Query: 61 PTSAVFQVIIGGAVGSGFIGGGAAASAPSGGGGAAAEAPA-AEEKKEEKEESDEDMGFSL 119
P+SAVFQVIIGG G G GG AA+A + GG AAA A A EEKKEEKEESDEDMGFSL
Sbjct: 60 PSSAVFQVIIGGGGGGGGFIGGGAAAASATGGAAAAPADAPVEEKKEEKEESDEDMGFSL 119
Query: 120 FD 121
FD
Sbjct: 120 FD 121
>gi|388517501|gb|AFK46812.1| unknown [Medicago truncatula]
Length = 119
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
MGVFT+V K G EW+ KQ GD+EASA ST+E+QRKLVQ +L+ DS+GGVQSS+S ++
Sbjct: 1 MGVFTFVLNKTGAEWTAKQY-SGDIEASAESTFEIQRKLVQAALAVDSNGGVQSSYSPIS 59
Query: 61 PTSAVFQ 67
P+S VFQ
Sbjct: 60 PSSGVFQ 66
>gi|384245588|gb|EIE19081.1| hypothetical protein COCSUDRAFT_67960 [Coccomyxa subellipsoidea
C-169]
Length = 119
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 84/124 (67%), Gaps = 8/124 (6%)
Query: 1 MGVFTYVCRKNGGEWSGKQI---EGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFS 57
M FT+V +K G WS +++ EG +L A A TY LQ++L+Q +L A++SG + SFS
Sbjct: 1 MVAFTFVVKKEGKSWSAQRVKDEEGPELTAEADDTYSLQKELLQLAL-AEASGPYRVSFS 59
Query: 58 LVTPTSAVFQVIIGGAVGSGFIGGGAAASAPSGGGGAAAEAPAAEEKKEEKEESDEDMGF 117
V+PTSAV+QV+IGGAV + GG + GGG AAAEA E+ EE+EE DEDMGF
Sbjct: 60 TVSPTSAVYQVVIGGAVAA----GGGGSGGGGGGGAAAAEAKEEEKPAEEEEEEDEDMGF 115
Query: 118 SLFD 121
SLFD
Sbjct: 116 SLFD 119
>gi|115469770|ref|NP_001058484.1| Os06g0701400 [Oryza sativa Japonica Group]
gi|109940149|sp|P56724.3|RLA3_ORYSJ RecName: Full=60S acidic ribosomal protein P3; AltName:
Full=P1/P2-like
gi|53792736|dbj|BAD53772.1| putative 60S acidic ribosomal protein P3 [Oryza sativa Japonica
Group]
gi|113596524|dbj|BAF20398.1| Os06g0701400 [Oryza sativa Japonica Group]
gi|215768155|dbj|BAH00384.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 119
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 93/121 (76%), Gaps = 2/121 (1%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
MGV+T+VCR +G EW+ KQ++G +LEASAA+ YELQR+LV + +ADS+ GVQSSFS+V+
Sbjct: 1 MGVYTFVCRSSGDEWTAKQLKG-ELEASAATPYELQRRLVAAASAADSAAGVQSSFSMVS 59
Query: 61 PTSAVFQVIIGGAVGSGFIGGGAAASAPSGGGGAAAEAPAAEEKKEEKEESDEDMGFSLF 120
P+SAVFQVIIG G IGGGAAA A SGG A A ++++E++E D D+GFSLF
Sbjct: 60 PSSAVFQVIIGAVGGGAAIGGGAAAGAASGGAAAEAPKAEEKKEEEKEESED-DLGFSLF 118
Query: 121 D 121
D
Sbjct: 119 D 119
>gi|222636172|gb|EEE66304.1| hypothetical protein OsJ_22535 [Oryza sativa Japonica Group]
Length = 103
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 59/70 (84%), Gaps = 1/70 (1%)
Query: 1 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVT 60
MGV+T+VCR +G EW+ KQ++G +LEASAA+ YELQR LV + +ADS+ GVQSSFS+V+
Sbjct: 1 MGVYTFVCRSSGDEWTAKQLKG-ELEASAATPYELQRCLVAAASAADSAAGVQSSFSMVS 59
Query: 61 PTSAVFQVII 70
P+SAVFQV +
Sbjct: 60 PSSAVFQVCL 69
>gi|38503538|gb|AAR22556.1| 60S acidic ribosomal protein P3 [Lactuca sativa]
Length = 44
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 28/35 (80%)
Query: 36 QRKLVQTSLSADSSGGVQSSFSLVTPTSAVFQVII 70
QR LVQ + S DSSGG+QSSFS V P SAVFQVII
Sbjct: 1 QRSLVQAAYSCDSSGGIQSSFSYVLPDSAVFQVII 35
>gi|326437231|gb|EGD82801.1| hypothetical protein PTSG_03451 [Salpingoeca sp. ATCC 50818]
Length = 118
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 68/123 (55%), Gaps = 10/123 (8%)
Query: 3 VFTYVCRKNGGEWS--GKQIEGGDLEASAASTYELQRKLVQTSL-SADSSGGVQSSFSLV 59
V+ ++C+ GG+W+ G+ DL A + +++ L QT L A SG VQ S ++V
Sbjct: 2 VYVFICKNEGGKWTAKGRGETAADLTAEGEDFFAVEKALKQTVLEHASYSGAVQISHTMV 61
Query: 60 TPTSAVFQVIIGGAVGSGFIGGGAAASAPSGGGGAAAEAPAAEEKKEEKEESDEDM-GFS 118
TP S+VF +GGA AA A + G A A A + EE+EESD+DM GFS
Sbjct: 62 TPKSSVFVCQLGGAPVG------GAAVAGASGDAGAPAAEEAAPEPEEEEESDDDMDGFS 115
Query: 119 LFD 121
LFD
Sbjct: 116 LFD 118
>gi|356539947|ref|XP_003538454.1| PREDICTED: 60S acidic ribosomal protein P0-like [Glycine max]
Length = 320
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 24/33 (72%)
Query: 89 SGGGGAAAEAPAAEEKKEEKEESDEDMGFSLFD 121
+ G A A A EEKKEE +ESD+DMGFSLFD
Sbjct: 288 TKSGAAPAAASKVEEKKEEADESDDDMGFSLFD 320
>gi|268567251|ref|XP_002639930.1| Hypothetical protein CBG08266 [Caenorhabditis briggsae]
Length = 110
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 58 LVTPTSAVFQVIIGGAVGSGFIGGGAAASAPSGGGGAAAEAPAAEEKKEEKEESDEDMGF 117
L+ SA I GG G A+++AP GG A A +K+E KEESD+DMGF
Sbjct: 54 LIAAGSAKLATISGGV-------GAASSAAPVTGGAAPAADNKPAKKEEPKEESDDDMGF 106
Query: 118 SLFD 121
LFD
Sbjct: 107 GLFD 110
>gi|255571675|ref|XP_002526781.1| hypothetical protein RCOM_0625640 [Ricinus communis]
gi|223533857|gb|EEF35587.1| hypothetical protein RCOM_0625640 [Ricinus communis]
Length = 91
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 24/32 (75%), Gaps = 2/32 (6%)
Query: 92 GGAAAEAPAAEEKKEEK--EESDEDMGFSLFD 121
A EAPA EE K+E+ EESD+D+GFSLFD
Sbjct: 60 SAAVVEAPATEENKKEEPAEESDDDIGFSLFD 91
>gi|198462065|ref|XP_002135702.1| GA27615 [Drosophila pseudoobscura pseudoobscura]
gi|198139754|gb|EDY70828.1| GA27615 [Drosophila pseudoobscura pseudoobscura]
Length = 114
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 7/49 (14%)
Query: 79 IGGGAAASAPSGG------GGAAAEAPAAEEKKEEKEESDEDMGFSLFD 121
+GGGA ++APS G GG EA + +EKKE+ E D+DMGF+LF+
Sbjct: 67 VGGGAVSAAPSAGTPAAPAGGDKKEA-SKDEKKEDSESEDDDMGFALFE 114
>gi|344236638|gb|EGV92741.1| 60S acidic ribosomal protein P0 [Cricetulus griseus]
Length = 220
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 94 AAAEAPAAEEKKEEKEESDEDMGFSLFD 121
A A AP KE+ EESD+D+GFSLFD
Sbjct: 193 AVAAAPNKANTKEDTEESDKDIGFSLFD 220
>gi|341877128|gb|EGT33063.1| hypothetical protein CAEBREN_11301 [Caenorhabditis brenneri]
Length = 107
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 81 GGAAASAPSGGGGAAAEAPAAEEKKEEKEESDEDMGFSLFD 121
GGA +++ + AA PAA++ E KEESDEDMGF LFD
Sbjct: 68 GGAPSTSSAPRDIAADNQPAAKQN-EPKEESDEDMGFGLFD 107
>gi|336471933|gb|EGO60093.1| hypothetical protein NEUTE1DRAFT_106753 [Neurospora tetrasperma
FGSC 2508]
gi|350294871|gb|EGZ75956.1| hypothetical protein NEUTE2DRAFT_126898 [Neurospora tetrasperma
FGSC 2509]
Length = 183
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 15/79 (18%)
Query: 56 FSLVTPTSAVFQVIIGGAVGSGFIGGGAAASA-------PSGGGGAAAEAPAA------E 102
F L P +A QV G + IG G++ SA P+ G+ A A + E
Sbjct: 107 FLLNGPATATVQVHRGTL--NQLIGEGSSRSAYVPSVGIPASVAGSTATATGSITREIEE 164
Query: 103 EKKEEKEESDEDMGFSLFD 121
EK +KEESDED+G+SL+D
Sbjct: 165 EKTNQKEESDEDVGYSLWD 183
>gi|224132596|ref|XP_002321361.1| predicted protein [Populus trichocarpa]
gi|222868357|gb|EEF05488.1| predicted protein [Populus trichocarpa]
Length = 110
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/21 (80%), Positives = 18/21 (85%)
Query: 101 AEEKKEEKEESDEDMGFSLFD 121
EEKKEE ESD+DMGFSLFD
Sbjct: 90 VEEKKEEAPESDDDMGFSLFD 110
>gi|118481776|gb|ABK92827.1| unknown [Populus trichocarpa]
Length = 110
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/20 (85%), Positives = 18/20 (90%)
Query: 102 EEKKEEKEESDEDMGFSLFD 121
EEKKEE ESD+DMGFSLFD
Sbjct: 91 EEKKEEAPESDDDMGFSLFD 110
>gi|118485332|gb|ABK94525.1| unknown [Populus trichocarpa]
gi|118485425|gb|ABK94569.1| unknown [Populus trichocarpa]
Length = 109
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/20 (85%), Positives = 18/20 (90%)
Query: 102 EEKKEEKEESDEDMGFSLFD 121
EEKKEE ESD+DMGFSLFD
Sbjct: 90 EEKKEEAPESDDDMGFSLFD 109
>gi|341902715|gb|EGT58650.1| hypothetical protein CAEBREN_18564 [Caenorhabditis brenneri]
Length = 104
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 5/47 (10%)
Query: 80 GGGAAASAPSGGGGAAAEA-PAAE----EKKEEKEESDEDMGFSLFD 121
G A+ PSG ++A P A+ +K+E+KEESD+DMGF LFD
Sbjct: 58 GKSKLAAVPSGEAAPTSKAQPPADSKPAKKEEQKEESDDDMGFGLFD 104
>gi|339243273|ref|XP_003377562.1| 60S acidic ribosomal protein P1 [Trichinella spiralis]
gi|316973629|gb|EFV57193.1| 60S acidic ribosomal protein P1 [Trichinella spiralis]
Length = 145
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 20/26 (76%), Gaps = 2/26 (7%)
Query: 98 APAA--EEKKEEKEESDEDMGFSLFD 121
APAA EEKK E +E DEDMGF LFD
Sbjct: 120 APAAKKEEKKPESDEEDEDMGFGLFD 145
>gi|164521910|gb|ABY60743.1| hypothetical protein [Trichinella spiralis]
Length = 113
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 20/26 (76%), Gaps = 2/26 (7%)
Query: 98 APAA--EEKKEEKEESDEDMGFSLFD 121
APAA EEKK E +E DEDMGF LFD
Sbjct: 88 APAAKKEEKKPESDEEDEDMGFGLFD 113
>gi|147904649|ref|NP_001080134.1| ribosomal protein, large, P0 [Xenopus laevis]
gi|27503344|gb|AAH42268.1| Arbp-prov protein [Xenopus laevis]
Length = 315
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/20 (75%), Positives = 18/20 (90%)
Query: 102 EEKKEEKEESDEDMGFSLFD 121
+EK+EE EESD+DMGF LFD
Sbjct: 296 DEKQEESEESDDDMGFGLFD 315
>gi|154795027|gb|ABS86546.1| 60S acidic ribosomal protein P1 [Melampsora medusae f. sp.
deltoidis]
Length = 109
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 17/23 (73%)
Query: 99 PAAEEKKEEKEESDEDMGFSLFD 121
P AE K KEESD+DMGF LFD
Sbjct: 87 PKAEXNKXXKEESDDDMGFGLFD 109
>gi|160948316|emb|CAO94759.1| putative ribosomal protein P2 [Pomphorhynchus laevis]
Length = 115
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 8/51 (15%)
Query: 79 IGGGAAASAPSGGGGAAAEA--PAA------EEKKEEKEESDEDMGFSLFD 121
IGG A+ S P G A++ PAA E EE +ESD+DMG LFD
Sbjct: 65 IGGVASGSLPVSGDAVVADSGKPAASTVATKEAPTEESDESDDDMGLGLFD 115
>gi|449521190|ref|XP_004167613.1| PREDICTED: 60S acidic ribosomal protein P2B-like [Cucumis sativus]
Length = 115
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/23 (73%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Query: 99 PAAEEKKEEKEESDEDMGFSLFD 121
P E+KKE EESDEDM FSLFD
Sbjct: 94 PVKEDKKE-VEESDEDMCFSLFD 115
>gi|449451120|ref|XP_004143310.1| PREDICTED: LOW QUALITY PROTEIN: 60S acidic ribosomal protein
P2B-like [Cucumis sativus]
Length = 107
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/23 (73%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Query: 99 PAAEEKKEEKEESDEDMGFSLFD 121
P E+KKE EESDEDM FSLFD
Sbjct: 86 PVKEDKKE-VEESDEDMCFSLFD 107
>gi|296209804|ref|XP_002751701.1| PREDICTED: uncharacterized protein LOC100412504 [Callithrix
jacchus]
Length = 223
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 19/33 (57%)
Query: 89 SGGGGAAAEAPAAEEKKEEKEESDEDMGFSLFD 121
S A AE E KK E E+SD+DMGF FD
Sbjct: 191 SCTTAAPAEEKKVEAKKHESEDSDDDMGFGHFD 223
>gi|281351740|gb|EFB27324.1| hypothetical protein PANDA_014718 [Ailuropoda melanoleuca]
Length = 80
Score = 34.3 bits (77), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 93 GAAAEAPAAEEKKEEKEESDEDMGFSLF 120
A E E K+EE EESD+DMGF+LF
Sbjct: 53 AAPPEEKEVEAKREESEESDDDMGFALF 80
>gi|432090278|gb|ELK23711.1| 60S acidic ribosomal protein P1 [Myotis davidii]
Length = 93
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 18/25 (72%)
Query: 97 EAPAAEEKKEEKEESDEDMGFSLFD 121
E E KKE+ EESD+DMGF LFD
Sbjct: 69 EETKVEAKKEDPEESDDDMGFGLFD 93
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.307 0.127 0.351
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,039,538,675
Number of Sequences: 23463169
Number of extensions: 85443841
Number of successful extensions: 1123272
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2117
Number of HSP's successfully gapped in prelim test: 936
Number of HSP's that attempted gapping in prelim test: 1098038
Number of HSP's gapped (non-prelim): 16412
length of query: 121
length of database: 8,064,228,071
effective HSP length: 88
effective length of query: 33
effective length of database: 5,999,469,199
effective search space: 197982483567
effective search space used: 197982483567
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 69 (31.2 bits)