Query 033353
Match_columns 121
No_of_seqs 141 out of 266
Neff 4.2
Searched_HMMs 13730
Date Mon Mar 25 21:30:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033353.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/033353hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2vqca1 a.4.5.78 (A:4-73) F-11 32.7 6.3 0.00046 24.2 0.8 21 24-44 29-49 (70)
2 d3cu3a1 d.17.4.28 (A:9-170) Un 29.5 8.2 0.0006 24.9 1.0 16 2-17 106-121 (162)
3 d1nvpd2 b.56.1.1 (D:54-99) Sma 29.0 12 0.00084 21.5 1.5 9 2-10 17-25 (46)
4 d1nh2d2 b.56.1.1 (D:55-121) Sm 24.9 14 0.001 22.6 1.4 8 3-10 21-28 (67)
5 d2dkqa1 b.55.1.2 (A:8-154) Ten 17.3 36 0.0026 22.2 2.4 18 3-20 103-120 (147)
6 d1adwa_ b.6.1.1 (A:) Pseudoazu 12.2 31 0.0022 21.7 0.8 9 2-10 72-80 (123)
7 d1pmya_ b.6.1.1 (A:) Pseudoazu 12.0 31 0.0023 21.8 0.8 9 2-10 72-80 (123)
8 d1kq6a_ d.189.1.1 (A:) p47phox 11.8 94 0.0069 19.2 3.2 34 3-44 24-58 (140)
9 d1elva2 g.18.1.1 (A:342-409) C 11.6 44 0.0032 18.7 1.3 17 3-20 42-58 (68)
10 d1y7ua1 d.38.1.1 (A:8-171) Acy 11.4 54 0.0039 21.7 1.9 13 2-14 108-120 (164)
No 1
>d2vqca1 a.4.5.78 (A:4-73) F-112 {Sulfolobus virus-like particle SSV1 [TaxId: 244589]}
Probab=32.71 E-value=6.3 Score=24.21 Aligned_cols=21 Identities=33% Similarity=0.452 Sum_probs=17.3
Q ss_pred cccccccchHHHHHHHHHHhh
Q 033353 24 DLEASAASTYELQRKLVQTSL 44 (121)
Q Consensus 24 ~~~~~~~~~~~lq~~lv~~a~ 44 (121)
.+|-|+.+.|.+||+|..-.-
T Consensus 29 qfeis~~~ayniqr~l~~ice 49 (70)
T d2vqca1 29 QFEISVPSAYNIQRALKAICE 49 (70)
T ss_dssp HHCCCHHHHHHHHHHHHHHHH
T ss_pred HheeccchHhHHHHHHHHHHh
Confidence 467899999999999876554
No 2
>d3cu3a1 d.17.4.28 (A:9-170) Uncharacterized protein NpunR1993 {Nostoc punctiforme [TaxId: 272131]}
Probab=29.50 E-value=8.2 Score=24.92 Aligned_cols=16 Identities=25% Similarity=0.420 Sum_probs=13.7
Q ss_pred ceEEEEEecCCCcccc
Q 033353 2 GVFTYVCRKNGGEWSG 17 (121)
Q Consensus 2 ~v~~fv~~~~g~~w~~ 17 (121)
+.+|+|+|+.+|.|.-
T Consensus 106 ~r~t~Vl~K~dG~WrI 121 (162)
T d3cu3a1 106 SLPLYVVTKGDEGWQI 121 (162)
T ss_dssp BCCEEEEEEETTEEEE
T ss_pred EEEEEEEEEECCEEEE
Confidence 5789999999999954
No 3
>d1nvpd2 b.56.1.1 (D:54-99) Small chain TOA2, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.99 E-value=12 Score=21.52 Aligned_cols=9 Identities=33% Similarity=0.656 Sum_probs=7.6
Q ss_pred ceEEEEEec
Q 033353 2 GVFTYVCRK 10 (121)
Q Consensus 2 ~v~~fv~~~ 10 (121)
.|+|||+|+
T Consensus 17 nVWTFilkd 25 (46)
T d1nvpd2 17 NVWTFVLND 25 (46)
T ss_dssp TEEEEEEEE
T ss_pred cEEEEEEec
Confidence 489999986
No 4
>d1nh2d2 b.56.1.1 (D:55-121) Small chain TOA2, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.85 E-value=14 Score=22.65 Aligned_cols=8 Identities=25% Similarity=0.883 Sum_probs=6.6
Q ss_pred eEEEEEec
Q 033353 3 VFTYVCRK 10 (121)
Q Consensus 3 v~~fv~~~ 10 (121)
|+|||+|+
T Consensus 21 VWTFiikn 28 (67)
T d1nh2d2 21 VWTFIVKN 28 (67)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEee
Confidence 78998886
No 5
>d2dkqa1 b.55.1.2 (A:8-154) Tensin {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.31 E-value=36 Score=22.16 Aligned_cols=18 Identities=28% Similarity=0.704 Sum_probs=13.6
Q ss_pred eEEEEEecCCCcccceec
Q 033353 3 VFTYVCRKNGGEWSGKQI 20 (121)
Q Consensus 3 v~~fv~~~~g~~w~~k~~ 20 (121)
+|.||+|+.++...-.||
T Consensus 103 ~FafIar~~~~~~~~~CH 120 (147)
T d2dkqa1 103 IFGFVAKKPGSPWENVCH 120 (147)
T ss_dssp EEEEEEECSSCTTCEEEE
T ss_pred eEEEEecCCCCCcceEEE
Confidence 699999997765444677
No 6
>d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]}
Probab=12.21 E-value=31 Score=21.75 Aligned_cols=9 Identities=22% Similarity=0.752 Sum_probs=7.6
Q ss_pred ceEEEEEec
Q 033353 2 GVFTYVCRK 10 (121)
Q Consensus 2 ~v~~fv~~~ 10 (121)
|+|.|+|.-
T Consensus 72 G~Y~Y~C~p 80 (123)
T d1adwa_ 72 GLYGVKCTP 80 (123)
T ss_dssp EEEEEECGG
T ss_pred CeEEEEEcc
Confidence 899999964
No 7
>d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]}
Probab=11.99 E-value=31 Score=21.80 Aligned_cols=9 Identities=33% Similarity=1.025 Sum_probs=7.4
Q ss_pred ceEEEEEec
Q 033353 2 GVFTYVCRK 10 (121)
Q Consensus 2 ~v~~fv~~~ 10 (121)
|+|.|+|.-
T Consensus 72 G~Y~Y~C~p 80 (123)
T d1pmya_ 72 GVYGFKCAP 80 (123)
T ss_dssp EEEEEECST
T ss_pred ceEEEEecc
Confidence 789999954
No 8
>d1kq6a_ d.189.1.1 (A:) p47phox NADPH oxidase {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.76 E-value=94 Score=19.23 Aligned_cols=34 Identities=15% Similarity=0.217 Sum_probs=22.6
Q ss_pred eEEEEEe-cCCCcccceeccCCcccccccchHHHHHHHHHHhh
Q 033353 3 VFTYVCR-KNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSL 44 (121)
Q Consensus 3 v~~fv~~-~~g~~w~~k~~~~~~~~~~~~~~~~lq~~lv~~a~ 44 (121)
||++-++ ++|.+|+-..+= ...++|+++|.+.-.
T Consensus 24 vY~I~v~~~d~~~~~V~RRY--------sdF~~Lh~~L~~~fp 58 (140)
T d1kq6a_ 24 VYMFLVKWQDLSEKVVYRRF--------TEIYEFHKTLKEMFP 58 (140)
T ss_dssp EEEEEEEETTCCEEEEEECH--------HHHHHHHHHHHHHCT
T ss_pred EEEEEEEEcCCCEEEEEEEH--------HHHHHHHHHHHHHCC
Confidence 4666554 456668764443 467899999988755
No 9
>d1elva2 g.18.1.1 (A:342-409) Complement C1S protease domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.56 E-value=44 Score=18.72 Aligned_cols=17 Identities=29% Similarity=0.661 Sum_probs=10.1
Q ss_pred eEEEEEecCCCcccceec
Q 033353 3 VFTYVCRKNGGEWSGKQI 20 (121)
Q Consensus 3 v~~fv~~~~g~~w~~k~~ 20 (121)
..+.+|+.+| .|+....
T Consensus 42 ~~~~~C~~dG-~Ws~~~~ 58 (68)
T d1elva2 42 GGEYHCAGNG-SWVNEVL 58 (68)
T ss_dssp CSEEEECTTS-CEEBTTT
T ss_pred ccEEEECCCC-cCcCCCC
Confidence 3466777654 4876543
No 10
>d1y7ua1 d.38.1.1 (A:8-171) Acyl-coa hydrolase BC2038 {Bacillus cereus [TaxId: 1396]}
Probab=11.42 E-value=54 Score=21.66 Aligned_cols=13 Identities=15% Similarity=0.291 Sum_probs=10.9
Q ss_pred ceEEEEEecCCCc
Q 033353 2 GVFTYVCRKNGGE 14 (121)
Q Consensus 2 ~v~~fv~~~~g~~ 14 (121)
+.||||++++.|+
T Consensus 108 a~ftfVavd~~g~ 120 (164)
T d1y7ua1 108 SFVTFVALSKENN 120 (164)
T ss_dssp EEEEEEEECTTSC
T ss_pred EEEEEEEECCCCC
Confidence 5699999998874
Done!