BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033355
(121 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LXM8|RLA24_ARATH 60S acidic ribosomal protein P2-4 OS=Arabidopsis thaliana
GN=RPP2D PE=1 SV=1
Length = 111
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/73 (76%), Positives = 63/73 (86%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
MKV AA+LLAVLGGN +PSAD+IK I+G+VGAD + +ELLL EV GKDI ELIASGRE
Sbjct: 1 MKVAAAFLLAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGRE 60
Query: 61 KLASVPSGGGVAV 73
KLASVPSGGGVAV
Sbjct: 61 KLASVPSGGGVAV 73
>sp|P41099|RLA2_PARAR 60S acidic ribosomal protein P2 OS=Parthenium argentatum PE=3
SV=1
Length = 114
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/67 (76%), Positives = 63/67 (94%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
MKV+AA+LLA+LGGNTSP+ +D+K IL SVGAD +D+++ELLLS+VKGKDITELIASGRE
Sbjct: 1 MKVIAAFLLALLGGNTSPTDEDLKSILASVGADADDDKIELLLSQVKGKDITELIASGRE 60
Query: 61 KLASVPS 67
+LASVPS
Sbjct: 61 RLASVPS 67
>sp|O24415|RLA2B_MAIZE 60S acidic ribosomal protein P2B OS=Zea mays GN=RPP2B PE=1 SV=1
Length = 113
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/70 (72%), Positives = 64/70 (91%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
MKV+AAYLLAVLGGNTSP+ADD+K IL SVGA+ ++ +LE LL+E+K KDITE+IA+GRE
Sbjct: 1 MKVIAAYLLAVLGGNTSPTADDVKSILESVGAEADEEKLEFLLTELKDKDITEVIAAGRE 60
Query: 61 KLASVPSGGG 70
+L+SVPSGGG
Sbjct: 61 RLSSVPSGGG 70
>sp|P46252|RLA2A_MAIZE 60S acidic ribosomal protein P2A OS=Zea mays GN=RPP2A PE=1 SV=3
Length = 112
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 55/66 (83%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
MK VAAYLLAVL GN SPSADD+ IL SVG + ++ ++ELLLS++ GKDITELIA+GRE
Sbjct: 1 MKFVAAYLLAVLAGNASPSADDLTAILESVGCEVDNEKMELLLSQLSGKDITELIAAGRE 60
Query: 61 KLASVP 66
K ASVP
Sbjct: 61 KFASVP 66
>sp|Q9SLF7|RLA22_ARATH 60S acidic ribosomal protein P2-2 OS=Arabidopsis thaliana
GN=RPP2B PE=1 SV=1
Length = 115
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/65 (75%), Positives = 57/65 (87%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
MKVVAAYLLAVL G SP++ DIK ILGSVGA+ ED+++ELLL EVKGKD+ ELIA+GRE
Sbjct: 1 MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60
Query: 61 KLASV 65
KLASV
Sbjct: 61 KLASV 65
>sp|O01725|RLA2_BRAFL 60S acidic ribosomal protein P2 OS=Branchiostoma floridae PE=3
SV=1
Length = 116
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 55/67 (82%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
M+ VAAYLLAVLGGN +PSA DIK ILGSVG D ED RL ++ E+KGKDI E++A+GR
Sbjct: 1 MRYVAAYLLAVLGGNANPSAGDIKKILGSVGIDAEDERLNKVIGELKGKDIEEVMAAGRG 60
Query: 61 KLASVPS 67
KL+S+PS
Sbjct: 61 KLSSMPS 67
>sp|P51407|RLA21_ARATH 60S acidic ribosomal protein P2-1 OS=Arabidopsis thaliana
GN=RPP2A PE=2 SV=2
Length = 115
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 56/65 (86%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
MKVVAA+LLAVL G SP+ DIK ILGSVGA+ ED+++ELLL EVKGKD+ ELIA+GRE
Sbjct: 1 MKVVAAFLLAVLSGKASPTTGDIKDILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60
Query: 61 KLASV 65
KLASV
Sbjct: 61 KLASV 65
>sp|Q9LH85|RLA23_ARATH 60S acidic ribosomal protein P2-3 OS=Arabidopsis thaliana GN=RPP2C
PE=1 SV=1
Length = 115
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 77/106 (72%), Gaps = 1/106 (0%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
MKV+AA+LLA LGGN +P+++D+K IL SVGA+ ++ +++LL S +K D+TELIA+GRE
Sbjct: 1 MKVIAAFLLAKLGGNENPTSNDLKKILESVGAEIDETKIDLLFSLIKDHDVTELIAAGRE 60
Query: 61 KLASVPSGGGVAVAAAPSAGGAGAAPAAAEAKKEEKVEE-KEESDD 105
K++++ SGG A GG A+ A A+ ++KVEE K+ES D
Sbjct: 61 KMSALSSGGPAVAMVAGGGGGGAASAAEPVAESKKKVEEVKDESSD 106
>sp|P08094|RLA2_SCHPO 60S acidic ribosomal protein P2-alpha OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=rpp201 PE=1 SV=1
Length = 110
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 53/69 (76%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
MK +AAYLL +GG SPSA DI+ +L +VG + E R+E L++E+ GKDI ELIA+G E
Sbjct: 1 MKYLAAYLLLTVGGKDSPSASDIESVLSTVGIEAESERIETLINELNGKDIDELIAAGNE 60
Query: 61 KLASVPSGG 69
KLA+VP+GG
Sbjct: 61 KLATVPTGG 69
>sp|Q9HFQ4|RLA4_CANAX 60S acidic ribosomal protein P2-B OS=Candida albicans GN=RPP2B
PE=1 SV=1
Length = 111
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 51/66 (77%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
MK +AAYLL V GGNTSPSA DI +L SVG + E++RL+ LL +++GKD+ ELIA G
Sbjct: 1 MKYLAAYLLLVQGGNTSPSASDITALLESVGVEAEESRLQALLKDLEGKDLQELIAEGNT 60
Query: 61 KLASVP 66
KLASVP
Sbjct: 61 KLASVP 66
>sp|Q6X9Z5|RLA2_HORSE 60S acidic ribosomal protein P2 OS=Equus caballus GN=RPLP2 PE=3
SV=1
Length = 115
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 53/66 (80%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
M+ VA+YLLA LGGNTSPSA DIK IL SVG + +D+RL+ ++SE+ GK+I ++IA G
Sbjct: 1 MRYVASYLLAALGGNTSPSAKDIKKILDSVGIEADDDRLDKVISELNGKNIEDVIAQGIG 60
Query: 61 KLASVP 66
KLASVP
Sbjct: 61 KLASVP 66
>sp|P99027|RLA2_MOUSE 60S acidic ribosomal protein P2 OS=Mus musculus GN=Rplp2 PE=1
SV=3
Length = 115
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
M+ VA+YLLA LGGN+SPSA DIK IL SVG + +D+RL ++SE+ GK+I ++IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGVG 60
Query: 61 KLASVP 66
KLASVP
Sbjct: 61 KLASVP 66
>sp|P42899|RLA2_BOVIN 60S acidic ribosomal protein P2 OS=Bos taurus GN=RPLP2 PE=2 SV=1
Length = 115
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
M+ VA+YLLA LGGN+SPSA DIK IL SVG + +D+RL ++SE+ GK+I ++IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELHGKNIEDVIAQGIG 60
Query: 61 KLASVP 66
KLASVP
Sbjct: 61 KLASVP 66
>sp|P05387|RLA2_HUMAN 60S acidic ribosomal protein P2 OS=Homo sapiens GN=RPLP2 PE=1
SV=1
Length = 115
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
M+ VA+YLLA LGGN+SPSA DIK IL SVG + +D+RL ++SE+ GK+I ++IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 61 KLASVP 66
KLASVP
Sbjct: 61 KLASVP 66
>sp|O14317|RLA6_SCHPO 60S acidic ribosomal protein P2-C OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rpp203 PE=1 SV=2
Length = 110
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 50/67 (74%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
MK +AAYLL +GG SPSA DI+ +L +VG + E R+E L+ E+ GKDI ELIA+G E
Sbjct: 1 MKYLAAYLLLTVGGKNSPSASDIESVLSTVGIESESERVEALIKELDGKDIDELIAAGNE 60
Query: 61 KLASVPS 67
KLA+VPS
Sbjct: 61 KLATVPS 67
>sp|Q96UQ7|RLA2_RHOGU 60S acidic ribosomal protein P2 OS=Rhodotorula glutinis PE=1 SV=1
Length = 110
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 71/108 (65%), Gaps = 2/108 (1%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
MK VAAYLL V GNTSPSA+D+K +L + ++ RL +L+ E++GKD+ E+IA G +
Sbjct: 1 MKHVAAYLLLVSAGNTSPSAEDVKKVLAAADIQADEERLSVLIKELEGKDVNEVIAEGSK 60
Query: 61 KLASVPSGGGVAVAAAPSAGGAGAAPAAAEAKKEEKVEEKEESDDVRF 108
KLASVPSGG AAA A GAA AE K EK EE + DD+ F
Sbjct: 61 KLASVPSGGAAPAAAAGGAAAGGAAEEKAEDKPAEKDEESD--DDMGF 106
>sp|Q9C3Z5|RLA2_PODAS 60S acidic ribosomal protein P2 OS=Podospora anserina PE=3 SV=1
Length = 111
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 51/67 (76%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
MK +AAYLL LGG +PSA D+K +L SVG + + +RL+ L+SE++GKD+ ELIA G
Sbjct: 1 MKHLAAYLLLTLGGKATPSAADVKAVLESVGIEADSDRLDKLISELEGKDVNELIAEGSS 60
Query: 61 KLASVPS 67
KLASVPS
Sbjct: 61 KLASVPS 67
>sp|P17478|RLA4_SCHPO 60S acidic ribosomal protein P2-beta OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rpp202 PE=1 SV=1
Length = 110
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 51/67 (76%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
MK +AAYLL +GG SPSA DI+ +L +VG + E R+E L+SE+ GK+I ELIA+G E
Sbjct: 1 MKYLAAYLLLTVGGKQSPSASDIESVLSTVGIEAEAERVESLISELNGKNIEELIAAGNE 60
Query: 61 KLASVPS 67
KL++VPS
Sbjct: 61 KLSTVPS 67
>sp|P02401|RLA2_RAT 60S acidic ribosomal protein P2 OS=Rattus norvegicus GN=Rplp2
PE=1 SV=2
Length = 115
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 51/66 (77%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
M+ VA+YLLA LGGN++PSA DIK IL SVG + +D RL ++SE+ GK+I ++IA G
Sbjct: 1 MRYVASYLLAALGGNSNPSAKDIKKILDSVGIEADDERLNKVISELNGKNIEDVIAQGVG 60
Query: 61 KLASVP 66
KLASVP
Sbjct: 61 KLASVP 66
>sp|O61463|RLA2_CRYST 60S acidic ribosomal protein P2 OS=Cryptochiton stelleri PE=3
SV=1
Length = 110
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 51/67 (76%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
M+ VAAY+LA LGGN PS D+K IL SVG + E ++L +++E+KGK++ E+IA G +
Sbjct: 1 MRYVAAYMLATLGGNEKPSESDLKKILDSVGIEVEKDQLTKVINELKGKNLDEVIAEGEK 60
Query: 61 KLASVPS 67
KLASVPS
Sbjct: 61 KLASVPS 67
>sp|P42037|RLA2_ALTAL 60S acidic ribosomal protein P2 OS=Alternaria alternata GN=ALTA5
PE=1 SV=1
Length = 113
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 54/66 (81%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
MK +AAYLL LGGNTSPSA D+K +L SVG + + +RL+ L+SE++GKDI ELIASG E
Sbjct: 1 MKHLAAYLLLGLGGNTSPSAADVKAVLESVGIEADSDRLDKLISELEGKDINELIASGSE 60
Query: 61 KLASVP 66
KLASVP
Sbjct: 61 KLASVP 66
>sp|Q8TFM9|RLA2_FUSCU 60S acidic ribosomal protein P2 OS=Fusarium culmorum PE=1 SV=1
Length = 109
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 53/66 (80%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
MK +AAYLL LGGNTSPSA D+K +L SVG D +++RL L+SE++GKDI +LIA G E
Sbjct: 1 MKHLAAYLLLGLGGNTSPSAADVKAVLTSVGIDADEDRLNKLISELEGKDIQQLIAEGSE 60
Query: 61 KLASVP 66
KLASVP
Sbjct: 61 KLASVP 66
>sp|Q9LUK2|RLA25_ARATH 60S acidic ribosomal protein P2-5 OS=Arabidopsis thaliana
GN=RPP2E PE=3 SV=1
Length = 114
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 50/65 (76%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
MKVVAAYLLA L GN +PS D+K I+ SVGA+ + +++L S +K +D+TELIA GRE
Sbjct: 1 MKVVAAYLLAKLSGNENPSVADLKKIVESVGAEIDQEKIDLFFSLIKDRDVTELIAVGRE 60
Query: 61 KLASV 65
K+A++
Sbjct: 61 KMAAL 65
>sp|P02399|RLA2_ARTSA 60S acidic ribosomal protein P2 OS=Artemia salina PE=1 SV=1
Length = 111
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
M+ VAAYLLA L GN PS DI+ IL SVG +C ++L+ +++E+KGKD+ LIA G+
Sbjct: 1 MRYVAAYLLAALSGNADPSTADIEKILSSVGIECNPSQLQKVMNELKGKDLEALIAEGQT 60
Query: 61 KLASVP 66
KLAS+P
Sbjct: 61 KLASMP 66
>sp|Q9GPU2|RLA2_EUPRA 60S acidic ribosomal protein P2 OS=Euplotes raikovi PE=3 SV=1
Length = 113
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 49/65 (75%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
MK +AAY L VLGGN+SPSADD+K +L SVG D E ++L+ LL ++GK + ELI +G
Sbjct: 1 MKYIAAYALLVLGGNSSPSADDVKKVLKSVGVDSEQDKLDALLKNLEGKQLHELIEAGSS 60
Query: 61 KLASV 65
K++S+
Sbjct: 61 KVSSL 65
>sp|Q29315|RLA2_PIG 60S acidic ribosomal protein P2 OS=Sus scrofa GN=RPLP2 PE=3 SV=1
Length = 115
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 49/65 (75%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
M+ VA+YLLA LGGNTSPSA DIK L SVG + + +RL ++SE+ GK+I ++IA G
Sbjct: 1 MRYVASYLLAALGGNTSPSAKDIKKXLDSVGIEADXDRLNKVISELNGKNIEDVIAQGIG 60
Query: 61 KLASV 65
KLASV
Sbjct: 61 KLASV 65
>sp|P90703|RLA2_BRUMA 60S acidic ribosomal protein P2 OS=Brugia malayi GN=rpp-2 PE=3 SV=1
Length = 114
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 61/105 (58%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
MK +AAYLL+ + GN SPSA DI+ +LGSVG D + ++S + GK I E+I +G
Sbjct: 2 MKYLAAYLLSTMSGNKSPSAKDIEDVLGSVGLDVDMEDANKVVSALSGKSIDEVITAGLA 61
Query: 61 KLASVPSGGGVAVAAAPSAGGAGAAPAAAEAKKEEKVEEKEESDD 105
K++SVPS V+ A + A A K E K KEESD+
Sbjct: 62 KVSSVPSDAAVSAIAPVVSATPTDALQAGSKKGETKEGPKEESDE 106
>sp|P42039|RLA2_DAVTA 60S acidic ribosomal protein P2 OS=Davidiella tassiana GN=CLAH5
PE=1 SV=3
Length = 111
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 43/53 (81%)
Query: 15 NTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGREKLASVPS 67
N+SPSA+DIK +L SVG D ++ RL LL E++GKDI ELI+SG EKLASVPS
Sbjct: 15 NSSPSAEDIKTVLSSVGIDADEERLSSLLKELEGKDINELISSGSEKLASVPS 67
>sp|P50879|RLA2_TAESO 60S acidic ribosomal protein P2 OS=Taenia solium PE=2 SV=1
Length = 121
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
M+ +AAYLLA LGG P DIK IL SVG +CE R +L + ++ GK++ +LI +G+E
Sbjct: 1 MRYLAAYLLAQLGGTGRPQESDIKNILSSVGVECEQERAKLGVDQLHGKNVRDLINTGKE 60
Query: 61 KLASVPSGGGVAVAAAPSAG 80
K+++V G A PS G
Sbjct: 61 KMSAVSF--GATPVAVPSGG 78
>sp|Q9UUZ6|RLA2_ASPFU 60S acidic ribosomal protein P2 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=AFUA_2G10100 PE=1 SV=2
Length = 111
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 43/54 (79%)
Query: 14 GNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGREKLASVPS 67
GNTSPS++D+K +L SVG D ++ RL L++E++GKD+ ELIA G KLASVPS
Sbjct: 14 GNTSPSSEDVKAVLSSVGIDADEERLNKLIAELEGKDLQELIAEGSTKLASVPS 67
>sp|P02400|RLA4_YEAST 60S acidic ribosomal protein P2-beta OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RPP2B PE=1 SV=2
Length = 110
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGK-DITELIASGR 59
MK +AAYLL V GGN +PSA DIK ++ SVGA+ ++ R+ LLS ++GK + E+IA G+
Sbjct: 1 MKYLAAYLLLVQGGNAAPSAADIKAVVESVGAEVDEARINELLSSLEGKGSLEEIIAEGQ 60
Query: 60 EKLASVPS 67
+K A+VP+
Sbjct: 61 KKFATVPT 68
>sp|O00806|RLA2_PLAF7 60S acidic ribosomal protein P2 OS=Plasmodium falciparum (isolate
3D7) GN=MAL3P3.19 PE=3 SV=1
Length = 112
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
MK VAAYL+ VLGGN +PS ++K +LG+V AD ED L + +KGK ELI G +
Sbjct: 3 MKYVAAYLMCVLGGNENPSTKEVKNVLGAVNADVEDEVLNNFIDSLKGKSCHELITDGLK 62
Query: 61 KLASV 65
KL ++
Sbjct: 63 KLQNI 67
>sp|P05389|RLA2_DROME 60S acidic ribosomal protein P2 OS=Drosophila melanogaster
GN=RpLP2 PE=1 SV=1
Length = 113
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
M+ VAAYLLAVLGG SP+ D++ IL SVG + + RL ++ E+ GK I +LI GRE
Sbjct: 1 MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60
Query: 61 KLASV 65
KL+S+
Sbjct: 61 KLSSM 65
>sp|O01504|RLA2_CAEEL 60S acidic ribosomal protein P2 OS=Caenorhabditis elegans
GN=rpa-2 PE=3 SV=2
Length = 107
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
MK + AYLLA LGGN SPSA D+ +L + G DC+ ++ +KGK I+E+IA G+
Sbjct: 1 MKYLGAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKV 60
Query: 61 KLASV 65
KL+SV
Sbjct: 61 KLSSV 65
>sp|Q967Y9|RLA2_EIMTE 60S acidic ribosomal protein P2 OS=Eimeria tenella PE=3 SV=2
Length = 114
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 44/67 (65%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
MK VAAYL+ VLGGN +P+A D+ +L VGA+ L+ L+ ++GK E+I++G E
Sbjct: 1 MKYVAAYLMTVLGGNEAPTAADVSRVLEPVGAEVNPEVLKTLIDAMQGKAAHEVISAGLE 60
Query: 61 KLASVPS 67
KL VP
Sbjct: 61 KLQKVPC 67
>sp|P27055|RLA2_BABBO 60S acidic ribosomal protein P2 OS=Babesia bovis PE=3 SV=1
Length = 112
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
+K V++YLLAV GN +PS DD+K IL +VG+D ++ L+ L+ + GK + E IA+G
Sbjct: 3 LKYVSSYLLAVAAGNENPSVDDLKKILDAVGSDVDEECLQGLVDSMSGKTVHETIAAGMT 62
Query: 61 KLAS 64
KL S
Sbjct: 63 KLQS 66
>sp|P05390|RLA2_WHEAT 60S acidic ribosomal protein P2 (Fragment) OS=Triticum aestivum
PE=1 SV=1
Length = 42
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 34/42 (80%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELL 42
MK++AAYLLA LGGN+SPSA D+K IL +VGA+ + +LE L
Sbjct: 1 MKLIAAYLLAYLGGNSSPSAADVKDILNAVGAEANEEKLEFL 42
>sp|Q9HFQ5|RLA2_CANAX 60S acidic ribosomal protein P2-A OS=Candida albicans GN=RPP2A
PE=1 SV=1
Length = 108
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
MK +AAYLL V GN +PSA D+K +L + + E+ ++E L+SE GK++ ELIA G E
Sbjct: 1 MKYLAAYLLLVNAGNATPSAADVKAVLSAADIEVEEEKVEKLISESDGKNVEELIAEGNE 60
Query: 61 KLASV 65
KL+SV
Sbjct: 61 KLSSV 65
>sp|P19943|RLA2_RABIT 60S acidic ribosomal protein P2 (Fragment) OS=Oryctolagus
cuniculus GN=RPLP2 PE=1 SV=1
Length = 44
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 35/44 (79%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLS 44
M+ VA+YLLA LGGN+SPSA DIK IL SVG + +D+RL ++S
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVIS 44
>sp|P22683|RLA2_DICDI 60S acidic ribosomal protein P2 OS=Dictyostelium discoideum
GN=rplp2 PE=1 SV=3
Length = 106
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
MK +AAYLLA L GN + ++ + IL SVG + + R+E + E+ GKD+ LIA+G+
Sbjct: 1 MKYLAAYLLASLSGNANAAS--VTKILQSVGVEVDAARVESVCKELDGKDVQALIAAGKS 58
Query: 61 KLASV 65
K+ SV
Sbjct: 59 KVGSV 63
>sp|P51408|RLA2_TRYBB 60S acidic ribosomal protein P2 OS=Trypanosoma brucei brucei PE=3
SV=1
Length = 107
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
MK +AAY L L G T PS D++ +L + G + +R+E LLSEV+GKD L A G+
Sbjct: 1 MKYLAAYALISLSGKT-PSKADVEAVLKAAGVPVDSSRVEELLSEVEGKDFDALCAEGKA 59
Query: 61 KL 62
KL
Sbjct: 60 KL 61
>sp|Q06383|RLA2_LEIIN 60S acidic ribosomal protein P2-1 OS=Leishmania infantum GN=LIP
PE=2 SV=1
Length = 106
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
M+ +AAY L L G T PS D++ +L + G + +R++ + EV+GK L+A GR
Sbjct: 1 MQYLAAYALVALSGKT-PSKADVQAVLKAAGVAVDASRVDAVFQEVEGKSFDALVAEGRT 59
Query: 61 KL 62
KL
Sbjct: 60 KL 61
>sp|P05319|RLA2_YEAST 60S acidic ribosomal protein P2-alpha OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RPP2A PE=1 SV=1
Length = 106
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 14 GNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGREKLASV 65
GNT P A IK IL SVG + ED ++ +LS ++GK + ELI G EKLA+V
Sbjct: 14 GNT-PDATKIKAILESVGIEIEDEKVSSVLSALEGKSVDELITEGNEKLAAV 64
>sp|O44010|RLA2_LEIBR 60S acidic ribosomal protein P2 OS=Leishmania braziliensis
GN=LIP2 PE=1 SV=1
Length = 105
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
M+ +AAY L L G T P D++ +L + G E +R++ L E++GK EL+ GR
Sbjct: 1 MQYLAAYALVALSGKT-PCKADVQAVLKAAGVAIELSRVDALFQELEGKSFDELMTEGRS 59
Query: 61 KL 62
KL
Sbjct: 60 KL 61
>sp|O43940|RLA2_LEIDO 60S acidic ribosomal protein P2 OS=Leishmania donovani GN=ARP-1
PE=3 SV=1
Length = 105
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
M+ +AAY L L G T PS ++ +L + G + +R++ + E++GK L+A GR
Sbjct: 1 MQYLAAYALVALSGKT-PSKAAVEAVLKAAGVAVDASRVDAVFQELEGKSFDALVAEGRA 59
Query: 61 KL 62
KL
Sbjct: 60 KL 61
>sp|Q8SRM2|RLA2_ENCCU 60S acidic ribosomal protein P2 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPP2A PE=1 SV=1
Length = 103
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
M+ VAAY++ G + + + +GA+ E + L LS+V GK + E+++ G+E
Sbjct: 1 MEYVAAYVMFDKVGK-ELNERSMTELFNEIGAEIEPETMRLFLSKVSGKSMDEVMSKGKE 59
Query: 61 KLASVPSGGGVAVAAAPSAGGAGAAPAAAEAKKEEKVEEKEESDDV 106
+AS +A++++ + A A A + E EE++E D+
Sbjct: 60 LMAS------LAISSSQKSEPAQPADTAESTQATENKEEEDEDFDI 99
>sp|Q06382|RLA3_LEIIN 60S acidic ribosomal protein P2-2 OS=Leishmania infantum GN=LIP'
PE=2 SV=1
Length = 111
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 2 KVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGREK 61
K +AAY LA L SPS D++ I +V D + L ++ V G+D+ LIA G K
Sbjct: 4 KYLAAYALASLS-KASPSQADVEAICKAVHIDVDQATLAFVMESVTGRDVATLIAEGAAK 62
Query: 62 LASVPSGGGVAVAAAPSAGGAGAAPAAAEAKK 93
++++P+ A A ++ AAPAAA AKK
Sbjct: 63 MSAMPAASSGAAAGVTASAAGDAAPAAAAAKK 94
>sp|P23632|RLA2_TRYCR 60S acidic ribosomal protein P2-A OS=Trypanosoma cruzi PE=1 SV=1
Length = 107
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
MK +AAY L L G T PS ++ +L + G + +R++ L +E GKD + G+
Sbjct: 1 MKYLAAYALVGLSGGT-PSKSAVEAVLKAAGVPVDPSRVDALFAEFAGKDFDTVCTEGKS 59
Query: 61 KL 62
KL
Sbjct: 60 KL 61
>sp|P26795|RLA3_TRYCR 60S acidic ribosomal protein P2-B OS=Trypanosoma cruzi PE=3 SV=1
Length = 112
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 1 MKVVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGRE 60
MK +AAY LA L T P A D++ I + G + E + L ++ + G+ + L+A G
Sbjct: 3 MKYLAAYALASLNKPT-PGAADVEAICKACGIEVESDALSFVMESIAGRSVATLVAEGAA 61
Query: 61 KL 62
K+
Sbjct: 62 KM 63
>sp|P54048|RL12_METJA 50S ribosomal protein L12 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 /
NBRC 100440) GN=rpl12 PE=3 SV=1
Length = 102
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 3 VVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIAS 57
+ AA LL G + D IK +L + G + +D R++ L++ ++G DI E IA+
Sbjct: 4 IYAALLLHSAGKEITE--DAIKAVLSAAGVEVDDARVKALVAGLEGVDIEEAIAN 56
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.130 0.350
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,295,368
Number of Sequences: 539616
Number of extensions: 2046124
Number of successful extensions: 15179
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 245
Number of HSP's successfully gapped in prelim test: 221
Number of HSP's that attempted gapping in prelim test: 13815
Number of HSP's gapped (non-prelim): 988
length of query: 121
length of database: 191,569,459
effective HSP length: 88
effective length of query: 33
effective length of database: 144,083,251
effective search space: 4754747283
effective search space used: 4754747283
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)