Query 033355
Match_columns 121
No_of_seqs 139 out of 809
Neff 5.3
Searched_HMMs 13730
Date Mon Mar 25 21:33:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033355.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/033355hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1avsa_ a.39.1.5 (A:) Troponin 68.2 4.3 0.00031 23.8 4.5 42 5-46 18-59 (81)
2 d1fw4a_ a.39.1.5 (A:) Calmodul 66.8 3.3 0.00024 23.3 3.6 42 5-46 7-48 (65)
3 d1lkja_ a.39.1.5 (A:) Calmodul 66.3 3.7 0.00027 25.8 4.2 47 3-49 85-131 (146)
4 d1jc2a_ a.39.1.5 (A:) Troponin 57.3 8.1 0.00059 22.2 4.3 42 6-47 14-55 (75)
5 d2mysc_ a.39.1.5 (C:) Myosin R 56.2 11 0.00082 23.3 5.2 43 5-47 85-127 (145)
6 d1wlza1 a.39.1.7 (A:229-311) D 56.0 7 0.00051 22.6 3.8 41 7-47 26-66 (83)
7 d2fcea1 a.39.1.5 (A:84-144) Ca 54.6 8 0.00058 21.3 3.8 42 5-46 5-46 (61)
8 d2icta1 a.35.1.3 (A:8-94) Anti 54.5 7.6 0.00056 23.3 3.9 34 7-41 30-63 (87)
9 d1wrka1 a.39.1.5 (A:4-85) Trop 53.2 16 0.0012 21.3 5.3 41 6-46 20-61 (82)
10 d1fi5a_ a.39.1.5 (A:) Troponin 53.0 10 0.00073 22.0 4.2 42 5-46 19-60 (81)
11 d2obha1 a.39.1.5 (A:26-166) Ca 52.2 21 0.0015 21.5 6.3 43 5-47 83-125 (141)
12 d1s6ja_ a.39.1.5 (A:) Calcium- 51.4 8.7 0.00063 22.8 3.8 41 6-46 28-68 (87)
13 d1f54a_ a.39.1.5 (A:) Calmodul 51.1 7 0.00051 22.3 3.2 41 6-46 15-55 (77)
14 d1tiza_ a.39.1.5 (A:) Calmodul 50.9 10 0.00074 21.1 3.9 37 10-46 10-46 (67)
15 d2mysb_ a.39.1.5 (B:) Myosin E 50.5 15 0.0011 22.8 5.1 43 4-46 80-122 (145)
16 d1oqpa_ a.39.1.5 (A:) Caltract 47.6 14 0.001 20.9 4.3 41 6-46 14-54 (77)
17 d2pq3a1 a.39.1.5 (A:3-75) Calm 47.5 6.5 0.00047 22.4 2.6 42 6-47 13-54 (73)
18 d1exra_ a.39.1.5 (A:) Calmodul 47.2 26 0.0019 21.2 6.5 52 5-56 86-142 (146)
19 d2a6ca1 a.35.1.13 (A:1-69) HTH 44.8 13 0.00094 21.0 3.7 28 8-35 36-64 (69)
20 d1k94a_ a.39.1.8 (A:) Grancalc 43.7 23 0.0017 23.1 5.4 42 6-47 75-116 (165)
21 d1ggwa_ a.39.1.5 (A:) Cdc4p {F 43.1 14 0.001 22.9 4.0 42 6-47 81-122 (140)
22 d1utxa_ a.35.1.3 (A:) Putative 42.0 15 0.0011 20.4 3.6 26 11-36 34-59 (66)
23 d2r1jl1 a.35.1.2 (L:3-68) P22 41.2 13 0.00096 20.5 3.3 24 12-35 37-60 (66)
24 d1y7ya1 a.35.1.3 (A:5-73) Rest 40.5 20 0.0014 20.0 4.0 26 11-36 42-67 (69)
25 d2b5aa1 a.35.1.3 (A:1-77) Regu 39.8 21 0.0015 20.1 4.2 27 10-36 42-68 (77)
26 d1w7jb1 a.39.1.5 (B:11-149) My 39.2 7 0.00051 24.0 1.9 41 6-46 82-122 (139)
27 d1un2a_ c.47.1.13 (A:) Disulfi 38.5 17 0.0013 24.6 4.1 46 19-69 5-50 (195)
28 d1lmb3_ a.35.1.2 (3:) lambda C 38.4 24 0.0018 20.8 4.4 29 11-39 45-73 (87)
29 d1wdcc_ a.39.1.5 (C:) Myosin R 37.6 12 0.00087 23.5 2.9 51 6-56 87-144 (152)
30 d1wdcb_ a.39.1.5 (B:) Myosin E 36.8 42 0.003 20.5 5.9 50 7-56 13-63 (142)
31 d1y9qa1 a.35.1.8 (A:4-82) Prob 33.9 34 0.0025 19.3 4.4 27 11-37 41-67 (79)
32 d2mysc_ a.39.1.5 (C:) Myosin R 33.4 20 0.0015 22.0 3.5 41 6-46 9-49 (145)
33 d1f1ea_ a.22.1.2 (A:) Archaeal 32.6 15 0.0011 24.3 2.9 31 6-36 43-73 (151)
34 d1topa_ a.39.1.5 (A:) Troponin 32.2 43 0.0032 20.6 5.1 43 4-46 99-141 (162)
35 d1sxjc2 c.37.1.20 (C:12-238) R 31.4 47 0.0034 21.6 5.4 39 17-56 157-199 (227)
36 d1sxjd2 c.37.1.20 (D:26-262) R 30.8 49 0.0036 21.4 5.4 39 17-56 166-208 (237)
37 d1oywa1 a.4.5.43 (A:407-516) D 30.2 20 0.0014 22.2 3.0 48 21-68 8-55 (110)
38 d1ggwa_ a.39.1.5 (A:) Cdc4p {F 29.9 17 0.0013 22.5 2.7 49 7-55 11-60 (140)
39 d2hf5a1 a.39.1.5 (A:81-113) Tr 28.2 19 0.0014 18.2 2.2 28 4-31 6-33 (33)
40 d1c7va_ a.39.1.5 (A:) Calcium 28.0 18 0.0013 20.2 2.3 41 6-46 7-48 (68)
41 d1sb6a_ d.58.17.1 (A:) Copper 27.9 20 0.0015 19.9 2.5 19 17-35 46-64 (64)
42 d1qxpa2 a.39.1.8 (A:515-702) C 27.6 33 0.0024 22.8 4.0 43 14-56 106-152 (188)
43 d1hqva_ a.39.1.8 (A:) Apoptosi 27.3 59 0.0043 20.7 5.3 35 12-46 97-131 (181)
44 d2ofya1 a.35.1.3 (A:3-84) Puta 26.9 30 0.0022 20.4 3.4 26 10-35 44-70 (82)
45 d1ae9a_ d.163.1.1 (A:) Integra 26.1 53 0.0039 19.6 4.6 41 17-57 3-43 (179)
46 d1dk0a_ d.35.1.1 (A:) Heme-bin 25.9 11 0.00078 26.4 1.1 27 12-38 139-165 (173)
47 d1tafb_ a.22.1.3 (B:) TAF(II)6 25.3 46 0.0034 19.7 3.9 45 17-62 6-51 (70)
48 d1ku5a_ a.22.1.2 (A:) Archaeal 25.1 19 0.0014 20.3 2.0 24 6-29 43-66 (66)
49 d1tafa_ a.22.1.3 (A:) TAF(II)4 24.9 35 0.0025 20.1 3.2 37 20-57 4-41 (68)
50 d1alva_ a.39.1.8 (A:) Calpain 24.2 29 0.0021 22.0 3.1 44 13-56 89-136 (173)
51 d1wdcb_ a.39.1.5 (B:) Myosin E 23.9 35 0.0026 20.9 3.4 36 12-47 87-122 (142)
52 d1m45a_ a.39.1.5 (A:) Myosin L 23.8 18 0.0013 22.3 1.9 41 6-46 86-126 (146)
53 d1o17a1 a.46.2.1 (A:1-70) Anth 23.2 60 0.0043 18.0 5.3 44 13-56 11-57 (70)
54 d1exra_ a.39.1.5 (A:) Calmodul 23.0 56 0.0041 19.5 4.3 40 8-47 16-55 (146)
55 d1whza_ d.50.3.2 (A:) Hypothet 22.4 29 0.0021 20.0 2.6 23 16-38 46-68 (70)
56 d2f2ac1 a.137.12.1 (C:3-94) Gl 21.7 48 0.0035 19.6 3.6 50 17-72 1-50 (92)
57 d1uhka1 a.39.1.5 (A:3-189) Cal 21.4 46 0.0033 20.7 3.6 52 6-57 110-166 (187)
58 d1sxja2 c.37.1.20 (A:295-547) 21.0 85 0.0062 20.4 5.2 39 17-56 183-225 (253)
59 d1xata_ b.81.1.3 (A:) Xenobiot 20.7 50 0.0037 22.2 3.9 40 18-57 163-202 (208)
60 d1jxca_ g.3.7.5 (A:) Trypsin/c 20.5 11 0.00078 22.5 0.1 13 104-116 17-29 (68)
61 d2gycf1 d.99.1.1 (F:59-149) Ri 20.4 29 0.0021 21.1 2.3 23 17-39 35-57 (91)
No 1
>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=68.20 E-value=4.3 Score=23.82 Aligned_cols=42 Identities=19% Similarity=0.347 Sum_probs=34.2
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHhcCCCcchhHHHHHHHHh
Q 033355 5 AAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEV 46 (121)
Q Consensus 5 aAYlLl~l~G~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L 46 (121)
-++-++-..|.-.|+.+++..+|++.|..+.+..+..+++.+
T Consensus 18 ~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~~~~ 59 (81)
T d1avsa_ 18 AAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEV 59 (81)
T ss_dssp HHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCeEchhHHHHHHHHcCCCCCHHHHHHHHHHh
Confidence 345555555666799999999999999999999888888877
No 2
>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}
Probab=66.85 E-value=3.3 Score=23.27 Aligned_cols=42 Identities=19% Similarity=0.363 Sum_probs=33.9
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHhcCCCcchhHHHHHHHHh
Q 033355 5 AAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEV 46 (121)
Q Consensus 5 aAYlLl~l~G~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L 46 (121)
-++-+.-..++-.|+.++++.+++..|..+.+..+..+++.+
T Consensus 7 ~aF~~fD~d~~G~I~~~el~~~l~~lg~~~~~~e~~~l~~~~ 48 (65)
T d1fw4a_ 7 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 48 (65)
T ss_dssp HHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTT
T ss_pred HHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc
Confidence 345555556666799999999999999999998888777765
No 3
>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=66.29 E-value=3.7 Score=25.80 Aligned_cols=47 Identities=26% Similarity=0.379 Sum_probs=37.4
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHhcCCCcchhHHHHHHHHhCCC
Q 033355 3 VVAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGK 49 (121)
Q Consensus 3 yvaAYlLl~l~G~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L~gk 49 (121)
+..++-.+-..++-.||.+++.++++..|..+....+..+++.+.++
T Consensus 85 ~~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~dd~ 131 (146)
T d1lkja_ 85 LLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVSDG 131 (146)
T ss_dssp HHHHHHHHCSSSSCEEEHHHHHHHHHHHTCSCCHHHHHHHHHHHCCS
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHcCCcccHHHHHHHHHhccCC
Confidence 34455555556666799999999999999999999999888887643
No 4
>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=57.31 E-value=8.1 Score=22.19 Aligned_cols=42 Identities=12% Similarity=0.230 Sum_probs=33.0
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHhcCCCcchhHHHHHHHHhC
Q 033355 6 AYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVK 47 (121)
Q Consensus 6 AYlLl~l~G~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L~ 47 (121)
++-++-..|+-.||.+++..+|...|..+....+..+++.+.
T Consensus 14 ~F~~fD~~~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~D 55 (75)
T d1jc2a_ 14 CFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSD 55 (75)
T ss_dssp HHHHHCCSTTSSEEHHHHHHHHHHSSSCCCHHHHHHHHHHHC
T ss_pred HHHHHcCCCcCeEcHHHHHHHHHhcCCCccHHHHHHHHHHhC
Confidence 344444456667999999999999999999888888887763
No 5
>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=56.16 E-value=11 Score=23.26 Aligned_cols=43 Identities=14% Similarity=0.281 Sum_probs=33.2
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHhcCCCcchhHHHHHHHHhC
Q 033355 5 AAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVK 47 (121)
Q Consensus 5 aAYlLl~l~G~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L~ 47 (121)
-++-.+-..|+-.||.++++++|...|..+....+..+++...
T Consensus 85 ~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~~ 127 (145)
T d2mysc_ 85 EGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKGQE 127 (145)
T ss_pred HHHHHhhcCCCCEEcHHHHHHHHHHhCCCCCHHHHHHHHhhcC
Confidence 3455555556667999999999999999988888887776544
No 6
>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.99 E-value=7 Score=22.57 Aligned_cols=41 Identities=12% Similarity=0.080 Sum_probs=33.4
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHhcCCCcchhHHHHHHHHhC
Q 033355 7 YLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVK 47 (121)
Q Consensus 7 YlLl~l~G~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L~ 47 (121)
+-..-..++-.+|.+++.++|...|+.+.+.....+.+.+.
T Consensus 26 F~~~D~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l~~~~d 66 (83)
T d1wlza1 26 FENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMP 66 (83)
T ss_dssp HHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSC
T ss_pred HHHHCCCCCceEChhHHHHHHHHhCCCCChhHHHHHhhccc
Confidence 33344456667999999999999999999999998888773
No 7
>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}
Probab=54.58 E-value=8 Score=21.25 Aligned_cols=42 Identities=21% Similarity=0.289 Sum_probs=33.0
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHhcCCCcchhHHHHHHHHh
Q 033355 5 AAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEV 46 (121)
Q Consensus 5 aAYlLl~l~G~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L 46 (121)
-|+-+.-..++-.|+.++++.+|+..|.......+..+++.+
T Consensus 5 ~aF~~fD~~~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~ 46 (61)
T d2fcea1 5 KAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGV 46 (61)
T ss_dssp HHHHHHCTTCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHTTC
T ss_pred HHHHHHCCCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHc
Confidence 445555555666799999999999999999998887776654
No 8
>d2icta1 a.35.1.3 (A:8-94) Antitoxin HigA {Escherichia coli [TaxId: 562]}
Probab=54.54 E-value=7.6 Score=23.29 Aligned_cols=34 Identities=15% Similarity=0.145 Sum_probs=26.1
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHhcCCCcchhHHHH
Q 033355 7 YLLAVLGGNTSPSADDIKGILGSVGADCEDNRLEL 41 (121)
Q Consensus 7 YlLl~l~G~~~~Tae~I~kIl~AaGveVd~~~~~~ 41 (121)
++--++.|+..||.+-+.+|-+..|+.++ +|+.+
T Consensus 30 ~is~ie~g~~~~s~~~~~kla~~lgvs~~-~~L~l 63 (87)
T d2icta1 30 TASRLLTGKAALTPEMAIKLSVVIGSSPQ-MWLNL 63 (87)
T ss_dssp HHHHHHHTSSCCCHHHHHHHHHHTCSCHH-HHHHH
T ss_pred HHHHHHHhccCCCHHHHHHHHHHHCcCHH-HHHhh
Confidence 44445668888999999999999999865 57653
No 9
>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}
Probab=53.19 E-value=16 Score=21.25 Aligned_cols=41 Identities=24% Similarity=0.433 Sum_probs=32.7
Q ss_pred HHHHHHhcC-CCCCCHHHHHHHHHhcCCCcchhHHHHHHHHh
Q 033355 6 AYLLAVLGG-NTSPSADDIKGILGSVGADCEDNRLELLLSEV 46 (121)
Q Consensus 6 AYlLl~l~G-~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L 46 (121)
++-+.--.| +-.|+..++..+|++.|..+....+..+++.+
T Consensus 20 ~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~~~ 61 (82)
T d1wrka1 20 AFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEV 61 (82)
T ss_dssp HHHHHTTTCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHTT
T ss_pred HHHHHcCcCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHh
Confidence 344443344 34799999999999999999999999888877
No 10
>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}
Probab=52.97 E-value=10 Score=22.04 Aligned_cols=42 Identities=12% Similarity=0.217 Sum_probs=33.2
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHhcCCCcchhHHHHHHHHh
Q 033355 5 AAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEV 46 (121)
Q Consensus 5 aAYlLl~l~G~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L 46 (121)
.+|-.+-..|+-.|+.+++..++...|..+....+..+++.+
T Consensus 19 ~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~ev~~~~~~~ 60 (81)
T d1fi5a_ 19 DLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDG 60 (81)
T ss_dssp HHHHHHCSSCSSEECHHHHHHHHHTSSSCCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCcccHHHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 455555566767799999999999999998888877777765
No 11
>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.16 E-value=21 Score=21.47 Aligned_cols=43 Identities=19% Similarity=0.256 Sum_probs=35.4
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHhcCCCcchhHHHHHHHHhC
Q 033355 5 AAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVK 47 (121)
Q Consensus 5 aAYlLl~l~G~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L~ 47 (121)
-+|..+...++-.++.+++.+++...|..+....+..+++.+.
T Consensus 83 ~~f~~~d~~~~G~i~~~el~~~l~~~g~~l~~~e~~~l~~~~D 125 (141)
T d2obha1 83 KAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEAD 125 (141)
T ss_dssp HHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHC
T ss_pred HHHHHhcccCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHC
Confidence 4556665666667999999999999999999999888888774
No 12
>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}
Probab=51.38 E-value=8.7 Score=22.76 Aligned_cols=41 Identities=15% Similarity=0.257 Sum_probs=32.6
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHhcCCCcchhHHHHHHHHh
Q 033355 6 AYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEV 46 (121)
Q Consensus 6 AYlLl~l~G~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L 46 (121)
+|-++--.|+-.++.+++..+++..|..+....+..+++.+
T Consensus 28 ~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~e~~~l~~~~ 68 (87)
T d1s6ja_ 28 LFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAA 68 (87)
T ss_dssp HHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHH
T ss_pred HHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHc
Confidence 45555445666799999999999999999888888777776
No 13
>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=51.09 E-value=7 Score=22.35 Aligned_cols=41 Identities=22% Similarity=0.338 Sum_probs=32.1
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHhcCCCcchhHHHHHHHHh
Q 033355 6 AYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEV 46 (121)
Q Consensus 6 AYlLl~l~G~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L 46 (121)
++-.+-..|+-.|+.+++..+|+..|..+....+..+++.+
T Consensus 15 ~F~~~D~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~~~ 55 (77)
T d1f54a_ 15 AFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEI 55 (77)
T ss_dssp HHHHTCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHTT
T ss_pred HHHHHcCCCCCeEChHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence 34444444566799999999999999999888888888776
No 14
>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=50.88 E-value=10 Score=21.07 Aligned_cols=37 Identities=8% Similarity=0.084 Sum_probs=30.8
Q ss_pred HHhcCCCCCCHHHHHHHHHhcCCCcchhHHHHHHHHh
Q 033355 10 AVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEV 46 (121)
Q Consensus 10 l~l~G~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L 46 (121)
+-..++-.|+..++..+++..|..+.+..+..+++.+
T Consensus 10 ~D~d~~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~~ 46 (67)
T d1tiza_ 10 FDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEI 46 (67)
T ss_dssp HCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHH
T ss_pred HCCCCcCcCcHHHHHHHHHHhccccchHHHHHHHHHh
Confidence 3344556799999999999999999999888888877
No 15
>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=50.54 E-value=15 Score=22.80 Aligned_cols=43 Identities=12% Similarity=0.176 Sum_probs=35.0
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHhcCCCcchhHHHHHHHHh
Q 033355 4 VAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEV 46 (121)
Q Consensus 4 vaAYlLl~l~G~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L 46 (121)
..||-++-..|+..|+.+++.++|+..|..+.+.....+++.+
T Consensus 80 ~~aF~~fD~~~~g~I~~~el~~~l~~~g~~ls~~e~~~~~~~~ 122 (145)
T d2mysb_ 80 MGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAF 122 (145)
T ss_pred HHHHHhhhhcccchhhHHHHHHHHHHcCCCCCHHHHHHHHHHh
Confidence 4456666666777799999999999999998888888877766
No 16
>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=47.56 E-value=14 Score=20.86 Aligned_cols=41 Identities=15% Similarity=0.302 Sum_probs=32.6
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHhcCCCcchhHHHHHHHHh
Q 033355 6 AYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEV 46 (121)
Q Consensus 6 AYlLl~l~G~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L 46 (121)
++-++-..++-.|+.+++..+|+..|..+....+..+++.+
T Consensus 14 ~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~~~~~~ 54 (77)
T d1oqpa_ 14 AFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEA 54 (77)
T ss_dssp HHHHHCTTCSSSEEHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred HHHHHcCCCCCEechHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence 44455455666799999999999999999888888777766
No 17
>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}
Probab=47.47 E-value=6.5 Score=22.36 Aligned_cols=42 Identities=19% Similarity=0.378 Sum_probs=33.0
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHhcCCCcchhHHHHHHHHhC
Q 033355 6 AYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVK 47 (121)
Q Consensus 6 AYlLl~l~G~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L~ 47 (121)
++-.+--.|+-.|+.+++..++...|..+....+..+++.+.
T Consensus 13 ~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~~~D 54 (73)
T d2pq3a1 13 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVD 54 (73)
T ss_dssp HHHHTCTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHC
T ss_pred HHHHHcCCCCceEeHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence 444444456667899999999999999999988888887763
No 18
>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}
Probab=47.16 E-value=26 Score=21.21 Aligned_cols=52 Identities=17% Similarity=0.342 Sum_probs=39.4
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHhcCCCcchhHHHHHHHHhC-----CCChHHHHH
Q 033355 5 AAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVK-----GKDITELIA 56 (121)
Q Consensus 5 aAYlLl~l~G~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L~-----gk~i~eLI~ 56 (121)
.+|-.+-..++..++.+++..+++..|..+....+..+++.+. ..++++.+.
T Consensus 86 ~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~i~~~~D~d~dG~i~~~eF~~ 142 (146)
T d1exra_ 86 EAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVR 142 (146)
T ss_dssp HHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHH
T ss_pred HHHHHhCCCCCCcCCHHHHHHHHHHHhhcCCHHHHHHHHHHhCCCCCCeEeHHHHHH
Confidence 4555555566778999999999999999999888888888773 135666553
No 19
>d2a6ca1 a.35.1.13 (A:1-69) HTH-motif protein NE1354 {Nitrosomonas europaea [TaxId: 915]}
Probab=44.76 E-value=13 Score=21.03 Aligned_cols=28 Identities=18% Similarity=0.341 Sum_probs=22.0
Q ss_pred HHHHhcCC-CCCCHHHHHHHHHhcCCCcc
Q 033355 8 LLAVLGGN-TSPSADDIKGILGSVGADCE 35 (121)
Q Consensus 8 lLl~l~G~-~~~Tae~I~kIl~AaGveVd 35 (121)
.--...|+ ..||-+.+.+++++.|++++
T Consensus 36 is~ie~g~~~~~s~~~L~~ia~~Lg~~i~ 64 (69)
T d2a6ca1 36 VSDLMRGKIDLFSLESLIDMITSIGLKVE 64 (69)
T ss_dssp HHHHHTTCGGGCCHHHHHHHHHHTTCCCC
T ss_pred HHHHHcccccchhHHHHHHHHHHhCCCcE
Confidence 33345565 56999999999999999886
No 20
>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.66 E-value=23 Score=23.06 Aligned_cols=42 Identities=10% Similarity=0.260 Sum_probs=33.2
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHhcCCCcchhHHHHHHHHhC
Q 033355 6 AYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVK 47 (121)
Q Consensus 6 AYlLl~l~G~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L~ 47 (121)
++-..-..++-.+|.++++.+|+..|.++.+...+.+++...
T Consensus 75 ~F~~fD~d~sG~I~~~El~~~l~~~G~~l~~~~~~~l~~~~d 116 (165)
T d1k94a_ 75 NFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYS 116 (165)
T ss_dssp HHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHHC
T ss_pred HHHHhCCCCCCeEcHHHHHHHHHHhhhcCCHHHHHHHHHHcC
Confidence 334444456667999999999999999999988888887663
No 21
>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=43.10 E-value=14 Score=22.90 Aligned_cols=42 Identities=14% Similarity=0.251 Sum_probs=32.5
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHhcCCCcchhHHHHHHHHhC
Q 033355 6 AYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVK 47 (121)
Q Consensus 6 AYlLl~l~G~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L~ 47 (121)
|+-.+-..++-.|+.++++++|+..|..+...-+..+++.+.
T Consensus 81 aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d 122 (140)
T d1ggwa_ 81 GFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVP 122 (140)
T ss_dssp HHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTT
T ss_pred HHHHHhccCCCcchHHHHHHHHHHcCCCCCHHHHHHHHHhhC
Confidence 344444445557999999999999999998888888887774
No 22
>d1utxa_ a.35.1.3 (A:) Putative transcription regulator CylR2 {Enterococcus faecalis [TaxId: 1351]}
Probab=41.97 E-value=15 Score=20.44 Aligned_cols=26 Identities=19% Similarity=0.088 Sum_probs=19.1
Q ss_pred HhcCCCCCCHHHHHHHHHhcCCCcch
Q 033355 11 VLGGNTSPSADDIKGILGSVGADCED 36 (121)
Q Consensus 11 ~l~G~~~~Tae~I~kIl~AaGveVd~ 36 (121)
...|+..|+.+.+.+|.+..|++++.
T Consensus 34 ~e~g~~~p~~~~l~~ia~~l~v~~~~ 59 (66)
T d1utxa_ 34 IEKNKYNPSLQLALKIAYYLNTPLED 59 (66)
T ss_dssp HHTTSCCCCHHHHHHHHHHTTSCHHH
T ss_pred HHcCCCCCCHHHHHHHHHHHCCCHHH
Confidence 34566678888888888888877654
No 23
>d2r1jl1 a.35.1.2 (L:3-68) P22 C2 repressor, DNA-binding domain {Salmonella bacteriophage P22 [TaxId: 10754]}
Probab=41.22 E-value=13 Score=20.53 Aligned_cols=24 Identities=8% Similarity=0.243 Sum_probs=15.6
Q ss_pred hcCCCCCCHHHHHHHHHhcCCCcc
Q 033355 12 LGGNTSPSADDIKGILGSVGADCE 35 (121)
Q Consensus 12 l~G~~~~Tae~I~kIl~AaGveVd 35 (121)
..|...|+.+.+.+|.+..|++++
T Consensus 37 e~g~~~p~~~~l~~ia~~l~v~~~ 60 (66)
T d2r1jl1 37 ERSETEPNGENLLALSKALQCSPD 60 (66)
T ss_dssp HTTSSCCBHHHHHHHHHHTTSCHH
T ss_pred HcCCCCCCHHHHHHHHHHhCCCHH
Confidence 345566777777777777666554
No 24
>d1y7ya1 a.35.1.3 (A:5-73) Restriction-modification controller protein C.AhdI {Aeromonas hydrophila [TaxId: 644]}
Probab=40.53 E-value=20 Score=20.01 Aligned_cols=26 Identities=15% Similarity=0.160 Sum_probs=21.6
Q ss_pred HhcCCCCCCHHHHHHHHHhcCCCcch
Q 033355 11 VLGGNTSPSADDIKGILGSVGADCED 36 (121)
Q Consensus 11 ~l~G~~~~Tae~I~kIl~AaGveVd~ 36 (121)
...|+..|+.+.+.+|.+..|++++.
T Consensus 42 ~E~g~~~p~~~~l~~ia~~l~v~~~~ 67 (69)
T d1y7ya1 42 VERGQRNVSLVNILKLATALDIEPRE 67 (69)
T ss_dssp HHTTCSCCBHHHHHHHHHHTTSCGGG
T ss_pred HHCCCCCCCHHHHHHHHHHhCcCHHH
Confidence 34577789999999999999998875
No 25
>d2b5aa1 a.35.1.3 (A:1-77) Regulatory protein C.BclI {Bacillus caldolyticus [TaxId: 1394]}
Probab=39.80 E-value=21 Score=20.14 Aligned_cols=27 Identities=19% Similarity=0.182 Sum_probs=20.0
Q ss_pred HHhcCCCCCCHHHHHHHHHhcCCCcch
Q 033355 10 AVLGGNTSPSADDIKGILGSVGADCED 36 (121)
Q Consensus 10 l~l~G~~~~Tae~I~kIl~AaGveVd~ 36 (121)
-+..|+..|+.+.|.+|.+..||+++.
T Consensus 42 ~~e~g~~~p~~~~l~~ia~~l~v~~~~ 68 (77)
T d2b5aa1 42 EVERGDRNISLINIHKICAALDIPAST 68 (77)
T ss_dssp HHHTTCSCCBHHHHHHHHHHTTCCHHH
T ss_pred HHHcCCCCCCHHHHHHHHHHhCCCHHH
Confidence 344566678888888888888887654
No 26
>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.20 E-value=7 Score=24.02 Aligned_cols=41 Identities=15% Similarity=0.310 Sum_probs=31.4
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHhcCCCcchhHHHHHHHHh
Q 033355 6 AYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEV 46 (121)
Q Consensus 6 AYlLl~l~G~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L 46 (121)
+|-.+-..++-.|+.++++++|+..|..+....+..+.+..
T Consensus 82 aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~ 122 (139)
T d1w7jb1 82 GFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGH 122 (139)
T ss_dssp HHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTC
T ss_pred hhhhccCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHhhC
Confidence 44444445566799999999999999999888887776543
No 27
>d1un2a_ c.47.1.13 (A:) Disulfide-bond formation facilitator (DsbA) {Escherichia coli [TaxId: 562]}
Probab=38.51 E-value=17 Score=24.62 Aligned_cols=46 Identities=24% Similarity=0.252 Sum_probs=34.4
Q ss_pred CHHHHHHHHHhcCCCcchhHHHHHHHHhCCCChHHHHHhhhhhhcccCCCC
Q 033355 19 SADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGREKLASVPSGG 69 (121)
Q Consensus 19 Tae~I~kIl~AaGveVd~~~~~~f~~~L~gk~i~eLI~~G~~kl~sv~agg 69 (121)
|.++|.+++...|++.+ .|-+.|+...+...|..........+.-|
T Consensus 5 s~~~i~~~~~~~Gld~~-----~f~~~~~s~~~~~~v~~~~~~a~~~gi~G 50 (195)
T d1un2a_ 5 SASDIRDVFINAGIKGE-----EYDAAWNSFVVKSLVAQQEKAAADVQLRG 50 (195)
T ss_dssp SHHHHHHHHHHHTCCHH-----HHHHHHTSHHHHHHHHHHHHHHHHTTCCS
T ss_pred CHHHHHHHHHHcCCCHH-----HHHHHHcCHHHHHHHHHHHHHHHHhCCCc
Confidence 78999999999999754 45677888888888877665555554433
No 28
>d1lmb3_ a.35.1.2 (3:) lambda C1 repressor, DNA-binding domain {Bacteriophage lambda [TaxId: 10710]}
Probab=38.40 E-value=24 Score=20.76 Aligned_cols=29 Identities=10% Similarity=0.061 Sum_probs=24.4
Q ss_pred HhcCCCCCCHHHHHHHHHhcCCCcchhHH
Q 033355 11 VLGGNTSPSADDIKGILGSVGADCEDNRL 39 (121)
Q Consensus 11 ~l~G~~~~Tae~I~kIl~AaGveVd~~~~ 39 (121)
+..|...|+.+.+.+|.+..|++++...+
T Consensus 45 ~E~g~~~~s~~~l~~ia~~l~v~~~~~~~ 73 (87)
T d1lmb3_ 45 LFNGINALNAYNAALLAKILKVSVEEFSP 73 (87)
T ss_dssp HHTTSSCCCHHHHHHHHHHHTSCGGGTCH
T ss_pred HHhccCCCcHHHHHHHHHHHCCCHHHHCh
Confidence 35677789999999999999999987754
No 29
>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=37.57 E-value=12 Score=23.54 Aligned_cols=51 Identities=12% Similarity=0.206 Sum_probs=37.2
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHhcCCCcchhHHHHHHHHhCC-------CChHHHHH
Q 033355 6 AYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKG-------KDITELIA 56 (121)
Q Consensus 6 AYlLl~l~G~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L~g-------k~i~eLI~ 56 (121)
|+-++-..++-.||.++++.+|...|..+.+.-++.+++.+.. .++++.+.
T Consensus 87 aF~~~D~~~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~d~~~d~~G~I~y~eF~~ 144 (152)
T d1wdcc_ 87 AFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVK 144 (152)
T ss_dssp HHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHH
T ss_pred hhhccccccCccchHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCEEEHHHHHH
Confidence 3333333455569999999999999999998888888887642 45566664
No 30
>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=36.76 E-value=42 Score=20.50 Aligned_cols=50 Identities=24% Similarity=0.385 Sum_probs=33.4
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHhcCCCcchhHHHHHHHHhCC-CChHHHHH
Q 033355 7 YLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKG-KDITELIA 56 (121)
Q Consensus 7 YlLl~l~G~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L~g-k~i~eLI~ 56 (121)
+-++-..++-.|+.+++.++|++.|.......+..+.+...| .++.+.+.
T Consensus 13 F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~el~~~~~~~~~~i~~~eF~~ 63 (142)
T d1wdcb_ 13 FSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTMFLS 63 (142)
T ss_dssp HHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHTTSSSCCCHHHHHH
T ss_pred HHHHcCCCCCcCChHHHHHHHHHhhcCCCHHHHHHHHHhccCccccccccc
Confidence 334433455568888888888888888877777776665554 55555554
No 31
>d1y9qa1 a.35.1.8 (A:4-82) Probable transcriptional regulator VC1968, N-terminal domain {Vibrio cholerae [TaxId: 666]}
Probab=33.86 E-value=34 Score=19.27 Aligned_cols=27 Identities=19% Similarity=0.251 Sum_probs=18.7
Q ss_pred HhcCCCCCCHHHHHHHHHhcCCCcchh
Q 033355 11 VLGGNTSPSADDIKGILGSVGADCEDN 37 (121)
Q Consensus 11 ~l~G~~~~Tae~I~kIl~AaGveVd~~ 37 (121)
...|+..|+.+.+.+|.+..|++++..
T Consensus 41 ~E~g~~~p~~~~l~~ia~~l~v~~~~l 67 (79)
T d1y9qa1 41 IERGESSPTIATLWKIASGLEASFSAF 67 (79)
T ss_dssp HHTTCSCCCHHHHHHHHHHHTCCSGGG
T ss_pred HHcCCCCCCHHHHHHHHHHHCCCHHHH
Confidence 345566678888888888887776543
No 32
>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=33.37 E-value=20 Score=21.96 Aligned_cols=41 Identities=20% Similarity=0.340 Sum_probs=29.9
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHhcCCCcchhHHHHHHHHh
Q 033355 6 AYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEV 46 (121)
Q Consensus 6 AYlLl~l~G~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L 46 (121)
++.++-..|+-.|+.+++..+|++.|..+....+..+....
T Consensus 9 ~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~ 49 (145)
T d2mysc_ 9 AFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNP 49 (145)
T ss_pred HHHHHcCCCCCeECHHHHHHHHHHhhhcchhhhhHHHHHHH
Confidence 34455555666799999999999999988777766555543
No 33
>d1f1ea_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=32.65 E-value=15 Score=24.35 Aligned_cols=31 Identities=10% Similarity=0.116 Sum_probs=25.6
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHhcCCCcch
Q 033355 6 AYLLAVLGGNTSPSADDIKGILGSVGADCED 36 (121)
Q Consensus 6 AYlLl~l~G~~~~Tae~I~kIl~AaGveVd~ 36 (121)
|+-++...|+..++.++|+..++..|++...
T Consensus 43 A~~l~~~~~rKTi~~edi~~a~~~~~~~~~~ 73 (151)
T d1f1ea_ 43 AKSVLDASGKKTLMEEHLKALADVLMVEGVE 73 (151)
T ss_dssp HHHHHHTTTCSEECHHHHHHHHHHHTCTTST
T ss_pred HHHHHHHcCCCcCCHHHHHHHHHhccccccc
Confidence 5677888899999999999999988875543
No 34
>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=32.25 E-value=43 Score=20.55 Aligned_cols=43 Identities=12% Similarity=0.239 Sum_probs=33.6
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHhcCCCcchhHHHHHHHHh
Q 033355 4 VAAYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEV 46 (121)
Q Consensus 4 vaAYlLl~l~G~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L 46 (121)
..+|-++-..|+-.||.+++..++...|.......+..+++.+
T Consensus 99 ~~aF~~~D~d~~G~Is~~e~~~~l~~~~~~~~~~~~~~l~~~~ 141 (162)
T d1topa_ 99 ANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDS 141 (162)
T ss_dssp HHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHh
Confidence 3455555556777799999999999999988887777777765
No 35
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=31.43 E-value=47 Score=21.57 Aligned_cols=39 Identities=13% Similarity=0.204 Sum_probs=31.8
Q ss_pred CCCHHHHHHHHHh----cCCCcchhHHHHHHHHhCCCChHHHHH
Q 033355 17 SPSADDIKGILGS----VGADCEDNRLELLLSEVKGKDITELIA 56 (121)
Q Consensus 17 ~~Tae~I~kIl~A----aGveVd~~~~~~f~~~L~gk~i~eLI~ 56 (121)
.++.++|.++|+. =|+.+++..++..++.-.| |+..+|.
T Consensus 157 ~~~~~~i~~~l~~I~~~e~i~i~~~~l~~i~~~s~G-d~R~ain 199 (227)
T d1sxjc2 157 PLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNG-DMRRVLN 199 (227)
T ss_dssp CCCHHHHHHHHHHHHHTTTCCBCHHHHHHHHHHHTT-CHHHHHH
T ss_pred cccccccccccccccccccccCCHHHHHHHHHHcCC-cHHHHHH
Confidence 5888998887765 4899999999998887655 8888876
No 36
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=30.79 E-value=49 Score=21.39 Aligned_cols=39 Identities=26% Similarity=0.376 Sum_probs=30.3
Q ss_pred CCCHHHHHHHHHhc----CCCcchhHHHHHHHHhCCCChHHHHH
Q 033355 17 SPSADDIKGILGSV----GADCEDNRLELLLSEVKGKDITELIA 56 (121)
Q Consensus 17 ~~Tae~I~kIl~Aa----GveVd~~~~~~f~~~L~gk~i~eLI~ 56 (121)
.++.+++.++|+.. |+.+++..++..++.-.| |+...|.
T Consensus 166 ~~~~~~~~~~L~~i~~~e~i~i~~~~l~~ia~~s~g-d~R~ai~ 208 (237)
T d1sxjd2 166 ALDASNAIDRLRFISEQENVKCDDGVLERILDISAG-DLRRGIT 208 (237)
T ss_dssp CCCHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHTSS-CHHHHHH
T ss_pred cccccccchhhhhhhhhhcCcCCHHHHHHHHHHcCC-CHHHHHH
Confidence 47888887777765 899999999988887655 7776664
No 37
>d1oywa1 a.4.5.43 (A:407-516) DNA helicase RecQ DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=30.23 E-value=20 Score=22.18 Aligned_cols=48 Identities=17% Similarity=0.278 Sum_probs=38.3
Q ss_pred HHHHHHHHhcCCCcchhHHHHHHHHhCCCChHHHHHhhhhhhcccCCC
Q 033355 21 DDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGREKLASVPSG 68 (121)
Q Consensus 21 e~I~kIl~AaGveVd~~~~~~f~~~L~gk~i~eLI~~G~~kl~sv~ag 68 (121)
++.++||+.+--.=+.+-...+++.|.|.+=..+...|-.++...+.|
T Consensus 8 ~~a~~iLs~V~~~~~rfg~~~ivdiL~Gs~~~kI~~~~h~~l~~yG~g 55 (110)
T d1oywa1 8 TDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVYGMG 55 (110)
T ss_dssp HHHHHHHHHHHHTTTCCCHHHHHHHHHTCCCHHHHHHTGGGSTTTTTT
T ss_pred HHHHHHHHHHHHhcCccCcceehhhHhcCccHHHHHhCCCcCCcccCc
Confidence 456677777754456788899999999999999999999888887654
No 38
>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=29.90 E-value=17 Score=22.47 Aligned_cols=49 Identities=14% Similarity=0.198 Sum_probs=30.6
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHhcCCCcchhHHHHHHHHhCC-CChHHHH
Q 033355 7 YLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKG-KDITELI 55 (121)
Q Consensus 7 YlLl~l~G~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L~g-k~i~eLI 55 (121)
+.++-..+.-.|+.+++..+|++.|..+...++..+.....| .++.+.+
T Consensus 11 F~~~D~d~dG~I~~~el~~~l~~lg~~~t~~ei~~~~~~~~~~i~~~eF~ 60 (140)
T d1ggwa_ 11 FSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEVDMEQFL 60 (140)
T ss_dssp HHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHHHTTSCSSEEHHHHH
T ss_pred HHHHCCCCCCeECHHHHHHHHHHHHhhhHHHhhhhhhccccccccchhhh
Confidence 333333445568888888888888888877777665544433 2334444
No 39
>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}
Probab=28.20 E-value=19 Score=18.23 Aligned_cols=28 Identities=21% Similarity=0.334 Sum_probs=21.3
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHhcC
Q 033355 4 VAAYLLAVLGGNTSPSADDIKGILGSVG 31 (121)
Q Consensus 4 vaAYlLl~l~G~~~~Tae~I~kIl~AaG 31 (121)
.-|+-+.--.|+-.|+.++++.|+.+.|
T Consensus 6 ~eAF~~FDkDg~G~Is~~EL~~vm~~lG 33 (33)
T d2hf5a1 6 REAFRVFDKDGNGYISAAELRHVMTNLG 33 (33)
T ss_dssp HHHHHHHSSSCCSCBCHHHHHHHTTSCC
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence 4455566666777899999999998765
No 40
>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}
Probab=27.96 E-value=18 Score=20.18 Aligned_cols=41 Identities=24% Similarity=0.324 Sum_probs=28.3
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHhcCCC-cchhHHHHHHHHh
Q 033355 6 AYLLAVLGGNTSPSADDIKGILGSVGAD-CEDNRLELLLSEV 46 (121)
Q Consensus 6 AYlLl~l~G~~~~Tae~I~kIl~AaGve-Vd~~~~~~f~~~L 46 (121)
++-++-..++-.||.+++..++...|.. +...-+..+++.+
T Consensus 7 ~F~~~D~d~~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~ 48 (68)
T d1c7va_ 7 AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEA 48 (68)
T ss_dssp HHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHH
T ss_pred HHHHHcCCCcCeEcHHHHHHHHHHhCCCCCCHHHHHHHHHHh
Confidence 3444444455568999999999999885 6666666666655
No 41
>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}
Probab=27.86 E-value=20 Score=19.86 Aligned_cols=19 Identities=16% Similarity=0.424 Sum_probs=16.2
Q ss_pred CCCHHHHHHHHHhcCCCcc
Q 033355 17 SPSADDIKGILGSVGADCE 35 (121)
Q Consensus 17 ~~Tae~I~kIl~AaGveVd 35 (121)
.++.++|.+.|+.+|-+++
T Consensus 46 ~~~~~~i~~~i~~~GY~ve 64 (64)
T d1sb6a_ 46 ALGEEQLRTAIASAGHEVE 64 (64)
T ss_dssp SSCHHHHHHHHHHHCCCCC
T ss_pred CCCHHHHHHHHHHcCCCCC
Confidence 4788999999999998774
No 42
>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]}
Probab=27.61 E-value=33 Score=22.77 Aligned_cols=43 Identities=12% Similarity=0.190 Sum_probs=34.2
Q ss_pred CCCCCCHHHHHHHHHhcCCCcchhHHHHHHHHhCCC----ChHHHHH
Q 033355 14 GNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGK----DITELIA 56 (121)
Q Consensus 14 G~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L~gk----~i~eLI~ 56 (121)
|+-.++.+++..+|.+.|..+.......+...-.++ ++++.|.
T Consensus 106 ~sG~i~~~El~~~l~~~g~~~~~~~~~~l~~~~~~~dg~i~f~eFi~ 152 (188)
T d1qxpa2 106 KSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFADDELIIDFDNFVR 152 (188)
T ss_dssp CCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHTSCSSSBCCHHHHHH
T ss_pred CCCEECHHHHHHHHHHhhhcCCHHHHHHHHHHhcCCCCcCCHHHHHH
Confidence 455799999999999999999999888888776543 3566554
No 43
>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=27.33 E-value=59 Score=20.72 Aligned_cols=35 Identities=14% Similarity=0.237 Sum_probs=29.4
Q ss_pred hcCCCCCCHHHHHHHHHhcCCCcchhHHHHHHHHh
Q 033355 12 LGGNTSPSADDIKGILGSVGADCEDNRLELLLSEV 46 (121)
Q Consensus 12 l~G~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L 46 (121)
..++..++.++++++++..|..+....+..+.+.+
T Consensus 97 ~~~~G~i~~~el~~~l~~~~~~l~~e~~~~~~~~~ 131 (181)
T d1hqva_ 97 RDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKF 131 (181)
T ss_dssp TTCCSSBCHHHHHHHHHHHTBCCCHHHHHHHHHHH
T ss_pred ccccchhhhHHHHHHHHHcCCcchhHHHHHHHHHh
Confidence 34556799999999999999998888888888776
No 44
>d2ofya1 a.35.1.3 (A:3-84) Putative transcriptional regulator RHA1_ro04071 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=26.94 E-value=30 Score=20.36 Aligned_cols=26 Identities=12% Similarity=0.208 Sum_probs=15.2
Q ss_pred HHhcCC-CCCCHHHHHHHHHhcCCCcc
Q 033355 10 AVLGGN-TSPSADDIKGILGSVGADCE 35 (121)
Q Consensus 10 l~l~G~-~~~Tae~I~kIl~AaGveVd 35 (121)
-+-.|+ ..|+-+.|.+|.++.|++++
T Consensus 44 ~iE~G~~~~ps~~tl~kia~~L~v~~~ 70 (82)
T d2ofya1 44 KIETGRIATPAFFTIAAVARVLDLSLD 70 (82)
T ss_dssp HHHTTCCSSCBHHHHHHHHHHTTCCHH
T ss_pred HHHcCCcCCCCHHHHHHHHHHHCCCHH
Confidence 334454 35677777777666666543
No 45
>d1ae9a_ d.163.1.1 (A:) Integrase (Int) {Bacteriophage lambda [TaxId: 10710]}
Probab=26.06 E-value=53 Score=19.58 Aligned_cols=41 Identities=22% Similarity=0.205 Sum_probs=30.0
Q ss_pred CCCHHHHHHHHHhcCCCcchhHHHHHHHHhCCCChHHHHHh
Q 033355 17 SPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIAS 57 (121)
Q Consensus 17 ~~Tae~I~kIl~AaGveVd~~~~~~f~~~L~gk~i~eLI~~ 57 (121)
.+|.|++.+|++++--.-...+.-..+....|--+.||+.-
T Consensus 3 ~lt~ee~~~l~~~~~~~~~~~~~~~~l~~~tG~R~~El~~L 43 (179)
T d1ae9a_ 3 RLTADEYLKIYQAAESSPCWLRLAMELAVVTGQRVGDLCEM 43 (179)
T ss_dssp CCCHHHHHHHHHHGGGSCHHHHHHHHHHHHHCCCHHHHHHC
T ss_pred CCCHHHHHHHHHHHhhCCHHHHHHHHHHHHhCCCCCccccc
Confidence 47999999999998554333333444556789999999963
No 46
>d1dk0a_ d.35.1.1 (A:) Heme-binding protein A (HasA) {Serratia marcescens [TaxId: 615]}
Probab=25.87 E-value=11 Score=26.36 Aligned_cols=27 Identities=22% Similarity=0.434 Sum_probs=23.1
Q ss_pred hcCCCCCCHHHHHHHHHhcCCCcchhH
Q 033355 12 LGGNTSPSADDIKGILGSVGADCEDNR 38 (121)
Q Consensus 12 l~G~~~~Tae~I~kIl~AaGveVd~~~ 38 (121)
+.||..|-.+-++.||++-||+|+.-.
T Consensus 139 mrGNa~plLe~l~~iLkA~GIdvntpl 165 (173)
T d1dk0a_ 139 MSGDTGALETALNGILDDYGLSVNSTF 165 (173)
T ss_dssp HTTCCHHHHHHHHHHHGGGTCCTTSBH
T ss_pred hcCCcHHHHHHHHHHHHcCCcccCCch
Confidence 458888999999999999999998754
No 47
>d1tafb_ a.22.1.3 (B:) TAF(II)62 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=25.30 E-value=46 Score=19.66 Aligned_cols=45 Identities=22% Similarity=0.311 Sum_probs=33.8
Q ss_pred CCCHHHHHHHHHhcCC-CcchhHHHHHHHHhCCCChHHHHHhhhhhh
Q 033355 17 SPSADDIKGILGSVGA-DCEDNRLELLLSEVKGKDITELIASGREKL 62 (121)
Q Consensus 17 ~~Tae~I~kIl~AaGv-eVd~~~~~~f~~~L~gk~i~eLI~~G~~kl 62 (121)
.++.+.|+.|-+++|+ +..++....++.-.+- -|.++|.+..+.|
T Consensus 6 ~~~~esik~iAeS~Gi~~l~de~a~~LA~DveY-Rl~eiiQeA~KFM 51 (70)
T d1tafb_ 6 SISAESMKVIAESIGVGSLSDDAAKELAEDVSI-KLKRIVQDAAKFM 51 (70)
T ss_dssp CCCHHHHHHHHHHTTCCCBCHHHHHHHHHHHHH-HHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 4899999999999999 6999888888876642 3556665554433
No 48
>d1ku5a_ a.22.1.2 (A:) Archaeal histone {Archaeon (Pyrococcus horikoshii) [TaxId: 53953]}
Probab=25.14 E-value=19 Score=20.30 Aligned_cols=24 Identities=29% Similarity=0.275 Sum_probs=19.6
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHh
Q 033355 6 AYLLAVLGGNTSPSADDIKGILGS 29 (121)
Q Consensus 6 AYlLl~l~G~~~~Tae~I~kIl~A 29 (121)
|+..+...+...|+.+||...|++
T Consensus 43 a~~~a~~~~RKTI~~~Dv~~Al~s 66 (66)
T d1ku5a_ 43 AVEFARHAGRKTVKVEDIKLAIKS 66 (66)
T ss_dssp HHHHHHTTTCSEECHHHHHHHHTC
T ss_pred HHHHHHHcCCCCCCHHHHHHHHhC
Confidence 566777788889999999998863
No 49
>d1tafa_ a.22.1.3 (A:) TAF(II)42 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=24.88 E-value=35 Score=20.11 Aligned_cols=37 Identities=22% Similarity=0.253 Sum_probs=27.5
Q ss_pred HHHHHHHHHhcCC-CcchhHHHHHHHHhCCCChHHHHHh
Q 033355 20 ADDIKGILGSVGA-DCEDNRLELLLSEVKGKDITELIAS 57 (121)
Q Consensus 20 ae~I~kIl~AaGv-eVd~~~~~~f~~~L~gk~i~eLI~~ 57 (121)
+.-|..||++.|| +.++-.+..|.... -+=+.++|..
T Consensus 4 a~~i~~iL~~~GV~~yeprV~~qlLef~-yRYtt~VL~D 41 (68)
T d1tafa_ 4 AQVIMSILKELNVQEYEPRVVNQLLEFT-FRYVTSILDD 41 (68)
T ss_dssp HHHHHHHHHHTTCCCBCTHHHHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHcCCccccHHHHHHHHHHH-HHHHHHHHHH
Confidence 4568899999999 68998888888754 4445566653
No 50
>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]}
Probab=24.15 E-value=29 Score=22.04 Aligned_cols=44 Identities=9% Similarity=0.296 Sum_probs=34.1
Q ss_pred cCCCCCCHHHHHHHHHhcCCCcchhHHHHHHHHhCC----CChHHHHH
Q 033355 13 GGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKG----KDITELIA 56 (121)
Q Consensus 13 ~G~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L~g----k~i~eLI~ 56 (121)
.++-.++.+++..+|+..|..+.....+.|.+.... .+.++.+.
T Consensus 89 d~~G~I~~~el~~~L~~~g~~~~~~~~~~~~~~d~d~~G~i~~~EF~~ 136 (173)
T d1alva_ 89 DRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYSDEGGNMDFDNFIS 136 (173)
T ss_dssp TCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHTCSSSCBCHHHHHH
T ss_pred CCCCeecHHHHHHHHHHHHHhhHHHHHHHhhccccCCCCeEeHHHHHH
Confidence 345569999999999999999999999988887653 34455543
No 51
>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=23.92 E-value=35 Score=20.86 Aligned_cols=36 Identities=14% Similarity=0.290 Sum_probs=27.4
Q ss_pred hcCCCCCCHHHHHHHHHhcCCCcchhHHHHHHHHhC
Q 033355 12 LGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVK 47 (121)
Q Consensus 12 l~G~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L~ 47 (121)
..|+-.|+.++++.+|+..|..+...-+..+++.+.
T Consensus 87 ~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d 122 (142)
T d1wdcb_ 87 EQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAP 122 (142)
T ss_dssp TTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCC
T ss_pred ccCCCcccHHHHHHHHHHccccCCHHHHHHHHHHhC
Confidence 345557899999999999998887777777776663
No 52
>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.81 E-value=18 Score=22.34 Aligned_cols=41 Identities=22% Similarity=0.299 Sum_probs=30.4
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHhcCCCcchhHHHHHHHHh
Q 033355 6 AYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEV 46 (121)
Q Consensus 6 AYlLl~l~G~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L 46 (121)
++..+-..++-.++.+++..+|...|..+.+..+..+++.+
T Consensus 86 ~F~~~D~~~~G~I~~~el~~~l~~~g~~l~~~ei~~l~~~~ 126 (146)
T d1m45a_ 86 AFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGV 126 (146)
T ss_dssp HHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTC
T ss_pred HHHhhccccccccchhhhhhhhcccCCcchHHHHHHHHHHh
Confidence 34334344556689999999999999988887777777666
No 53
>d1o17a1 a.46.2.1 (A:1-70) Anthranilate phosphoribosyltransferase (TrpD) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=23.24 E-value=60 Score=17.98 Aligned_cols=44 Identities=9% Similarity=0.249 Sum_probs=35.7
Q ss_pred cCCCCCCHHHHHHHHHhc-CCCcchhHHHHHHHHh--CCCChHHHHH
Q 033355 13 GGNTSPSADDIKGILGSV-GADCEDNRLELLLSEV--KGKDITELIA 56 (121)
Q Consensus 13 ~G~~~~Tae~I~kIl~Aa-GveVd~~~~~~f~~~L--~gk~i~eLI~ 56 (121)
..+...|.++++.+++.. ..++.+.....|+.+| +|-+.+|+..
T Consensus 11 ~~g~~Ls~~e~~~~~~~i~~g~~s~~qiaafL~al~~kGet~~Ei~g 57 (70)
T d1o17a1 11 INKSDLEINEAEELAKAIIRGEVPEILVSAILVALRMKGESKNEIVG 57 (70)
T ss_dssp HTTCCCCHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHCCCHHHHHH
T ss_pred HcCCCCCHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCHHHHHH
Confidence 334569999999999886 4689999999998877 7888888875
No 54
>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}
Probab=23.00 E-value=56 Score=19.53 Aligned_cols=40 Identities=18% Similarity=0.342 Sum_probs=30.9
Q ss_pred HHHHhcCCCCCCHHHHHHHHHhcCCCcchhHHHHHHHHhC
Q 033355 8 LLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVK 47 (121)
Q Consensus 8 lLl~l~G~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L~ 47 (121)
.++--.++-.||.+++..++...|..+...+...+.+.+.
T Consensus 16 ~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d 55 (146)
T d1exra_ 16 ALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVD 55 (146)
T ss_dssp HHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC
T ss_pred HHHcCCCCCeECHHHHHHHHHhcCCCCCHHHHHHHHHhcC
Confidence 3343445557899999999999999988888887777774
No 55
>d1whza_ d.50.3.2 (A:) Hypothetical protein TTHA1913 {Thermus thermophilus [TaxId: 274]}
Probab=22.42 E-value=29 Score=19.96 Aligned_cols=23 Identities=22% Similarity=0.203 Sum_probs=19.5
Q ss_pred CCCCHHHHHHHHHhcCCCcchhH
Q 033355 16 TSPSADDIKGILGSVGADCEDNR 38 (121)
Q Consensus 16 ~~~Tae~I~kIl~AaGveVd~~~ 38 (121)
.++..--+++|++.+|+++|++.
T Consensus 46 kei~~gtl~~Ilkqagl~~eef~ 68 (70)
T d1whza_ 46 GELPKGTFKRILRDAGLTEEEFH 68 (70)
T ss_dssp SSCCHHHHHHHHHHTTCCHHHHH
T ss_pred CccCHHHHHHHHHHhCCCHHHHH
Confidence 46888899999999999988753
No 56
>d2f2ac1 a.137.12.1 (C:3-94) Glu-tRNAGln amidotransferase C subunit, GatC {Staphylococcus aureus [TaxId: 1280]}
Probab=21.72 E-value=48 Score=19.58 Aligned_cols=50 Identities=10% Similarity=0.152 Sum_probs=37.0
Q ss_pred CCCHHHHHHHHHhcCCCcchhHHHHHHHHhCCCChHHHHHhhhhhhcccCCCCCcc
Q 033355 17 SPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGREKLASVPSGGGVA 72 (121)
Q Consensus 17 ~~Tae~I~kIl~AaGveVd~~~~~~f~~~L~gk~i~eLI~~G~~kl~sv~agg~a~ 72 (121)
.||.++|++|-+=+-+++...-...|.+.|+ +|=+++ ++|..+-..|..|
T Consensus 1 KIs~e~i~~lA~LarL~l~deE~~~~~~~l~--~Il~~~----~~L~~vDt~~vep 50 (92)
T d2f2ac1 1 KVTREEVEHIANLARLQISPEETEEMANTLE--SILDFA----KQNDSADTEGVEP 50 (92)
T ss_dssp CCCHHHHHHHHHHTTCCCCTTHHHHHHHHHH--HHHHHH----GGGGGSCCTTCCC
T ss_pred CCCHHHHHHHHHHccCCCCHHHHHHHHHHHH--HHHHHH----HHHhcCCcCCCCC
Confidence 3899999999999999999999999998874 233333 3566666655433
No 57
>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}
Probab=21.41 E-value=46 Score=20.74 Aligned_cols=52 Identities=13% Similarity=0.100 Sum_probs=39.7
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHhcCCCcchhHHHHHHHHhC-----CCChHHHHHh
Q 033355 6 AYLLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVK-----GKDITELIAS 57 (121)
Q Consensus 6 AYlLl~l~G~~~~Tae~I~kIl~AaGveVd~~~~~~f~~~L~-----gk~i~eLI~~ 57 (121)
++.+.-..++-.||.++++++|+..|.......+..+.+.+. ..++++.+..
T Consensus 110 ~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~ 166 (187)
T d1uhka1 110 LFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQ 166 (187)
T ss_dssp HHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHH
T ss_pred HHHHHccCCCcccchHHHHHHHHHhCCCccHHHHHHHHHHhCCCCCCCEeHHHHHHH
Confidence 334444456667999999999999999988888998888883 3467777753
No 58
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.96 E-value=85 Score=20.39 Aligned_cols=39 Identities=28% Similarity=0.453 Sum_probs=29.4
Q ss_pred CCCHHHHHHHHHh----cCCCcchhHHHHHHHHhCCCChHHHHH
Q 033355 17 SPSADDIKGILGS----VGADCEDNRLELLLSEVKGKDITELIA 56 (121)
Q Consensus 17 ~~Tae~I~kIl~A----aGveVd~~~~~~f~~~L~gk~i~eLI~ 56 (121)
.|+.++|.++|+. -|+++++..++.+++.-.| |+..+|.
T Consensus 183 ~~~~~~i~~~l~~i~~~e~i~i~~~~l~~i~~~s~G-DiR~ai~ 225 (253)
T d1sxja2 183 RPDANSIKSRLMTIAIREKFKLDPNVIDRLIQTTRG-DIRQVIN 225 (253)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCCCTTHHHHHHHHTTT-CHHHHHH
T ss_pred ccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhCCC-cHHHHHH
Confidence 4778888777665 4899999888888876554 8877774
No 59
>d1xata_ b.81.1.3 (A:) Xenobiotic acetyltransferase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=20.65 E-value=50 Score=22.25 Aligned_cols=40 Identities=23% Similarity=0.147 Sum_probs=34.9
Q ss_pred CCHHHHHHHHHhcCCCcchhHHHHHHHHhCCCChHHHHHh
Q 033355 18 PSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIAS 57 (121)
Q Consensus 18 ~Tae~I~kIl~AaGveVd~~~~~~f~~~L~gk~i~eLI~~ 57 (121)
.+++.|+++++-.=-+-+..++......|...|+..|+..
T Consensus 163 ~~~~~i~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (208)
T d1xata_ 163 FSDGDIQNLLEMAWWDWPLADIEAAMPLLCTGDIPALYQH 202 (208)
T ss_dssp SCHHHHHHHHHHCGGGSCHHHHHHSHHHHTSSCHHHHHHH
T ss_pred CCHHHHHHHHHhccccCCHHHHHHHHHHHhhcCHHHHHHH
Confidence 5889999999986556778999999999999999999974
No 60
>d1jxca_ g.3.7.5 (A:) Trypsin/chymotrypsin inhibitor ATT {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=20.48 E-value=11 Score=22.53 Aligned_cols=13 Identities=46% Similarity=0.881 Sum_probs=10.3
Q ss_pred ccccccccccccc
Q 033355 104 DDVRFTYLMPSIF 116 (121)
Q Consensus 104 ddDmf~l~~~~~~ 116 (121)
-|-.|++-+|-||
T Consensus 17 gdvgf~fCaprif 29 (68)
T d1jxca_ 17 GDVGFGFCAPRIF 29 (68)
T ss_dssp SSCSTTTCSTTCC
T ss_pred CCCCccccccccc
Confidence 3344999999998
No 61
>d2gycf1 d.99.1.1 (F:59-149) Ribosomal protein L9 C-domain {Escherichia coli [TaxId: 562]}
Probab=20.35 E-value=29 Score=21.10 Aligned_cols=23 Identities=17% Similarity=0.332 Sum_probs=20.2
Q ss_pred CCCHHHHHHHHHhcCCCcchhHH
Q 033355 17 SPSADDIKGILGSVGADCEDNRL 39 (121)
Q Consensus 17 ~~Tae~I~kIl~AaGveVd~~~~ 39 (121)
++|..+|.+.|+..|+++|...+
T Consensus 35 SVt~~dI~~~l~~~g~~Idk~~I 57 (91)
T d2gycf1 35 SIGTRDIADAVTAAGVEVAKSEV 57 (91)
T ss_dssp CCCHHHHHHHHTTTTCCCCSTTS
T ss_pred ecCHHHHHHHHHHcCCcccHHHE
Confidence 58999999999999999987553
Done!