Query 033358
Match_columns 121
No_of_seqs 64 out of 66
Neff 2.6
Searched_HMMs 29240
Date Mon Mar 25 21:37:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033358.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033358hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ngp_A Spectrin alpha chain, b 78.9 5.7 0.00019 23.0 5.1 37 82-118 26-62 (62)
2 2eqi_A Phospholipase C, gamma 75.1 4 0.00014 24.5 3.8 39 82-120 27-66 (69)
3 1qp2_A Protein (PSAE protein); 71.9 3.5 0.00012 28.0 3.2 32 74-107 11-45 (70)
4 3eg3_A Proto-oncogene tyrosine 70.5 13 0.00044 21.5 5.2 37 82-118 25-62 (63)
5 3h0h_A Proto-oncogene tyrosine 69.7 11 0.00039 22.5 5.0 37 82-118 35-73 (73)
6 1y0m_A 1-phosphatidylinositol- 69.5 13 0.00045 21.6 5.1 36 83-118 24-60 (61)
7 2vwf_A Growth factor receptor- 69.2 14 0.00047 21.2 5.1 36 83-118 23-58 (58)
8 3thk_A Spectrin alpha chain, b 68.2 15 0.0005 22.0 5.3 38 82-119 25-62 (73)
9 1sem_A SEM-5; SRC-homology 3 ( 68.1 14 0.0005 21.1 5.1 36 83-118 23-58 (58)
10 3ulr_B SRC substrate cortactin 68.1 15 0.0005 21.5 5.1 37 82-118 29-65 (65)
11 3u23_A CD2-associated protein; 67.3 14 0.00048 21.4 4.9 38 82-119 27-64 (65)
12 4hci_A Cupredoxin 1; structura 67.2 11 0.00037 24.1 4.7 55 45-110 27-84 (100)
13 2ekh_A SH3 and PX domain-conta 67.0 20 0.00068 22.2 5.9 38 82-119 28-65 (80)
14 1uti_A GRB2-related adaptor pr 66.5 16 0.00055 21.0 5.1 35 84-118 23-57 (58)
15 2ak5_A RHO guanine nucleotide 65.5 18 0.00061 21.2 5.2 38 82-119 26-63 (64)
16 1ruw_A Myosin-3 isoform, MYO3; 64.9 19 0.00067 21.4 5.5 37 83-119 24-62 (69)
17 4glm_A Dynamin-binding protein 64.8 17 0.00058 21.5 5.0 38 82-119 33-70 (72)
18 2pqh_A Spectrin alpha chain, b 62.2 21 0.00071 22.1 5.3 37 83-119 23-59 (80)
19 1tuc_A Alpha-spectrin; capping 61.9 22 0.00076 21.0 5.2 38 82-119 9-46 (63)
20 2bz8_A SH3-domain kinase bindi 61.4 21 0.00071 20.5 5.1 35 84-118 23-57 (58)
21 4ag1_C Fynomer; hydrolase-de n 61.1 22 0.00076 22.4 5.3 38 82-119 26-65 (84)
22 2epd_A RHO GTPase-activating p 61.0 25 0.00086 21.5 5.4 39 82-120 30-68 (76)
23 2oaw_A Spectrin alpha chain, b 60.9 22 0.00074 20.6 4.9 36 83-118 22-65 (65)
24 1w1f_A Tyrosine-protein kinase 60.9 22 0.00076 20.7 5.4 36 82-118 27-64 (65)
25 2dil_A Proline-serine-threonin 60.9 24 0.00081 21.0 5.7 38 82-119 28-65 (69)
26 2dl4_A Protein STAC; SH3 domai 59.8 25 0.00086 20.9 5.2 37 83-119 28-64 (68)
27 4f14_A Nebulette; SH3 domain, 59.4 23 0.00078 20.4 5.2 37 82-118 26-64 (64)
28 1iby_A Nitrosocyanin; RED copp 59.1 18 0.00061 23.3 4.7 57 45-112 37-96 (112)
29 1jo8_A ABP1P, actin binding pr 56.9 26 0.00087 20.1 5.0 35 84-118 22-58 (58)
30 4esr_A Jouberin; AHI-1, AHI1, 55.8 26 0.00089 20.7 4.7 38 81-118 25-63 (69)
31 2g6f_X RHO guanine nucleotide 55.5 27 0.00094 20.1 5.2 36 82-117 24-59 (59)
32 2d8j_A FYN-related kinase; SH3 55.1 25 0.00084 21.2 4.6 38 82-119 27-73 (77)
33 2kxd_A 11-MER peptide, SH3 dom 54.8 33 0.0011 20.7 5.4 38 82-119 19-56 (73)
34 2dnu_A RUH-061, SH3 multiple d 54.4 31 0.0011 20.5 5.0 37 83-119 29-65 (71)
35 2ecz_A Sorbin and SH3 domain-c 54.2 32 0.0011 20.4 5.2 37 83-119 28-66 (70)
36 2ega_A SH3 and PX domain-conta 51.9 31 0.001 20.5 4.6 37 83-119 29-65 (70)
37 2oi3_A Tyrosine-protein kinase 51.6 35 0.0012 21.0 5.0 37 82-119 45-83 (86)
38 2yuo_A CIP85, RUN and TBC1 dom 51.3 39 0.0013 20.5 5.2 37 83-119 28-64 (78)
39 1x2p_A Protein arginine N-meth 51.1 33 0.0011 20.3 4.6 36 83-118 28-63 (68)
40 1zx6_A YPR154WP; SH3 domain, p 51.0 33 0.0011 19.6 5.2 35 83-117 23-57 (58)
41 1wxt_A Hypothetical protein FL 50.9 33 0.0011 20.4 4.7 37 82-119 27-64 (68)
42 2xmf_A Myosin 1E SH3; motor pr 50.8 34 0.0012 19.7 5.2 36 82-117 25-60 (60)
43 3cqt_A P59-FYN, proto-oncogene 50.7 34 0.0011 21.3 4.8 36 84-119 27-64 (79)
44 4fm4_B NitrIle hydratase beta 50.2 23 0.00079 27.3 4.7 48 48-104 117-180 (206)
45 2jt4_A Cytoskeleton assembly c 49.8 38 0.0013 20.0 5.2 36 84-119 28-66 (71)
46 1uhc_A KIAA1010 protein; beta 49.5 35 0.0012 20.9 4.7 38 82-119 33-74 (79)
47 2dl8_A SLIT-ROBO RHO GTPase-ac 48.0 43 0.0015 20.1 5.4 60 53-120 7-67 (72)
48 1i07_A Epidermal growth factor 47.8 20 0.0007 20.7 3.3 37 83-120 22-59 (60)
49 1uj0_A Signal transducing adap 47.6 40 0.0014 19.6 4.9 33 84-116 27-59 (62)
50 1k4u_S Phagocyte NADPH oxidase 47.1 39 0.0013 19.6 4.5 36 83-118 26-61 (62)
51 1msp_A MSP, major sperm protei 47.0 5.5 0.00019 27.6 0.7 48 65-112 45-94 (126)
52 1x2k_A OSTF1, osteoclast stimu 46.6 43 0.0015 19.8 4.7 37 82-118 27-63 (68)
53 1s1n_A Nephrocystin 1; beta ba 46.5 28 0.00095 20.5 3.8 37 82-118 30-67 (68)
54 2ysq_A RHO guanine nucleotide 46.0 50 0.0017 20.3 5.1 37 83-119 31-67 (81)
55 2yun_A Nostrin; nitric oxide s 45.4 37 0.0013 20.7 4.3 37 83-119 28-64 (79)
56 2dbm_A SH3-containing GRB2-lik 45.0 43 0.0015 20.1 4.6 35 84-118 29-63 (73)
57 2zzd_A Thiocyanate hydrolase s 44.8 9.4 0.00032 28.0 1.7 39 45-92 32-70 (126)
58 1cka_A C-CRK N-terminal SH3 do 44.7 40 0.0014 19.1 4.2 34 84-117 23-57 (57)
59 2i0n_A Class VII unconventiona 44.6 53 0.0018 20.2 5.2 32 88-119 36-68 (80)
60 2j6f_A CD2-associated protein; 43.9 46 0.0016 19.3 5.3 36 84-119 23-59 (62)
61 1neg_A Spectrin alpha chain, b 42.9 63 0.0021 20.5 5.4 37 83-119 38-74 (83)
62 2dm1_A Protein VAV-2; RHO fami 42.9 42 0.0014 20.2 4.3 24 96-119 43-66 (73)
63 1gl5_A Tyrosine-protein kinase 42.6 51 0.0017 19.4 5.1 36 82-117 22-58 (67)
64 1uff_A Intersectin 2; beta bar 42.5 54 0.0019 20.7 4.9 27 94-120 39-65 (93)
65 1ujy_A RHO guanine nucleotide 42.0 37 0.0013 20.5 3.9 29 90-118 38-66 (76)
66 2l0a_A STAM-1, signal transduc 41.9 34 0.0012 21.3 3.8 34 83-116 38-71 (72)
67 2o9s_A Ponsin; SH3 domain, sig 41.8 44 0.0015 19.6 4.2 35 84-118 28-64 (67)
68 1m1s_A WR4; structural genomic 41.8 13 0.00045 26.2 2.0 42 65-111 43-86 (116)
69 1row_A SSP-19, MSP-domain prot 41.4 12 0.00041 25.7 1.7 42 65-111 35-78 (109)
70 2dmo_A Neutrophil cytosol fact 41.2 55 0.0019 19.4 5.1 38 82-119 27-64 (68)
71 1w70_A Neutrophil cytosol fact 41.2 51 0.0017 19.0 5.3 36 82-117 24-59 (60)
72 1yn8_A NBP2, NAP1-binding prot 41.1 48 0.0017 18.7 4.4 36 83-118 22-59 (59)
73 2egc_A SH3 and PX domain-conta 41.0 50 0.0017 20.1 4.4 39 81-119 28-70 (75)
74 2cub_A Cytoplasmic protein NCK 40.9 66 0.0022 20.2 5.4 57 55-119 17-74 (88)
75 2ct3_A Vinexin; SH3 domian, st 40.2 56 0.0019 19.2 4.6 38 82-119 27-66 (70)
76 2ed0_A ABL interactor 2; coile 40.2 62 0.0021 19.7 5.6 38 82-119 37-74 (78)
77 2bzy_A CRK-like protein, CRKL 39.5 58 0.002 19.2 5.7 38 83-120 24-61 (67)
78 2dl3_A Sorbin and SH3 domain-c 39.5 57 0.002 19.1 5.3 36 84-119 29-64 (68)
79 1ri9_A FYN-binding protein; SH 39.3 49 0.0017 23.4 4.6 39 81-119 60-99 (102)
80 2csq_A RIM-BP2, RIM binding pr 38.5 76 0.0026 20.2 5.8 63 57-120 19-84 (97)
81 4e6r_A Cytoplasmic protein NCK 38.5 53 0.0018 18.4 5.3 37 82-118 21-57 (58)
82 2eyx_A V-CRK sarcoma virus CT1 38.5 61 0.0021 19.2 5.6 38 83-120 29-66 (67)
83 2dbk_A CRK-like protein; struc 38.3 70 0.0024 20.0 4.9 37 83-119 39-75 (88)
84 1hsq_A Phospholipase C-gamma ( 37.8 11 0.00038 22.7 1.0 36 84-119 28-64 (71)
85 2ew3_A SH3-containing GRB2-lik 37.7 67 0.0023 19.3 5.3 37 82-118 23-59 (68)
86 1oot_A Hypothetical 40.4 kDa p 37.4 58 0.002 18.6 5.0 34 84-117 25-60 (60)
87 2djq_A SH3 domain containing r 37.2 63 0.0022 19.0 5.8 36 84-119 29-64 (68)
88 1qd7_I S17 ribosomal protein; 37.0 16 0.00056 25.0 1.8 19 49-67 49-67 (89)
89 1u5s_A Cytoplasmic protein NCK 36.3 67 0.0023 19.0 5.0 27 93-119 39-66 (71)
90 2ed1_A 130 kDa phosphatidylino 36.3 68 0.0023 19.4 4.5 36 84-119 32-70 (76)
91 1jb0_E Photosystem 1 reaction 35.5 56 0.0019 22.3 4.3 40 51-107 2-45 (75)
92 3qyh_B CO-type nitrIle hydrata 35.4 18 0.00063 28.2 2.1 39 45-92 126-164 (219)
93 1uhf_A Intersectin 2; beta bar 35.4 42 0.0014 20.0 3.4 35 84-119 30-64 (69)
94 2cuc_A SH3 domain containing r 35.4 63 0.0022 18.9 4.1 37 83-119 28-66 (70)
95 3jv3_A Intersectin-1; SH3 doma 34.8 72 0.0025 23.1 5.1 38 81-118 21-58 (283)
96 2d8h_A SH3YL1 protein; SH3 dom 34.6 78 0.0027 19.2 5.5 38 82-119 37-76 (80)
97 1ugp_B NitrIle hydratase beta 34.6 41 0.0014 26.3 4.0 40 45-93 134-173 (226)
98 2kgt_A Tyrosine-protein kinase 34.1 71 0.0024 18.9 4.2 35 83-118 31-71 (72)
99 2nwm_A Vinexin; cell adhesion; 34.1 75 0.0026 18.9 4.8 36 84-119 23-58 (65)
100 2e6z_A Transcription elongatio 34.1 17 0.00059 22.4 1.4 37 46-102 4-40 (59)
101 1zlm_A Osteoclast stimulating 34.0 67 0.0023 18.3 4.9 35 82-116 23-57 (58)
102 1wi7_A SH3-domain kinase bindi 33.3 42 0.0014 19.8 3.1 36 84-119 29-64 (68)
103 2kbt_A Chimera of proto-oncoge 33.2 1.1E+02 0.0039 21.2 5.8 37 83-119 26-63 (142)
104 2v1q_A SLA1, cytoskeleton asse 33.0 69 0.0023 18.1 4.8 24 94-117 35-60 (60)
105 2x3w_D Syndapin I, protein kin 32.9 62 0.0021 18.4 3.7 23 95-117 37-60 (60)
106 1v1c_A Obscurin; muscle, sarco 32.7 1.1E+02 0.0037 20.3 5.6 54 61-117 5-68 (71)
107 1zuy_A Myosin-5 isoform; SH3 d 31.9 71 0.0024 17.9 5.0 35 82-116 21-57 (58)
108 3hht_B NitrIle hydratase beta 31.8 18 0.00061 28.5 1.5 39 45-92 137-175 (229)
109 2enm_A Sorting nexin-9; SH3-li 31.7 86 0.0029 18.8 4.5 37 83-119 31-69 (77)
110 2cre_A HEF-like protein; SH3 d 31.6 81 0.0028 18.5 4.6 26 94-119 42-67 (71)
111 1wx6_A Cytoplasmic protein NCK 31.5 57 0.002 20.3 3.7 25 94-118 51-76 (91)
112 3reb_B Tyrosine-protein kinase 31.5 95 0.0032 19.2 4.7 36 82-118 23-60 (90)
113 2ydl_A SH3 domain-containing k 31.2 89 0.003 18.9 5.5 26 94-119 36-61 (69)
114 1wxu_A Peroxisomal biogenesis 31.2 40 0.0014 21.3 2.9 24 95-118 54-78 (93)
115 1z9l_A Vesicle-associated memb 31.1 19 0.00066 24.5 1.4 47 65-111 47-95 (128)
116 2j05_A RAS GTPase-activating p 31.0 82 0.0028 18.4 4.5 35 84-118 28-64 (65)
117 3c0c_A Endophilin-A2; endocyto 30.9 88 0.003 18.7 4.7 35 84-118 35-69 (73)
118 2v1r_A Peroxisomal membrane pr 30.8 83 0.0028 19.0 4.2 23 96-118 54-77 (80)
119 3r8n_Q 30S ribosomal protein S 30.1 17 0.00058 24.3 1.0 20 48-67 48-67 (80)
120 1jqq_A PEX13P, peroxisomal mem 30.1 1E+02 0.0035 19.2 4.7 23 96-118 54-77 (92)
121 2eb4_A 2-OXO-HEPT-3-ENE-1,7-di 30.0 26 0.0009 26.8 2.1 31 73-104 228-258 (267)
122 1wyx_A CRK-associated substrat 29.9 87 0.003 18.4 4.3 25 94-118 38-62 (69)
123 2da9_A SH3-domain kinase bindi 29.9 88 0.003 18.4 4.3 25 94-118 41-65 (70)
124 2dlp_A KIAA1783 protein; SH3 d 29.9 99 0.0034 19.1 4.5 26 94-119 42-67 (85)
125 1saw_A Hypothetical protein FL 29.7 34 0.0012 25.5 2.7 31 73-104 182-212 (225)
126 2lj0_A Sorbin and SH3 domain-c 29.5 99 0.0034 18.9 5.3 37 83-119 27-65 (65)
127 1z9q_A Neutrophil cytosol fact 29.4 82 0.0028 19.9 4.1 31 88-118 44-74 (79)
128 1ng2_A Neutrophil cytosolic fa 29.2 1E+02 0.0036 21.9 5.1 38 82-119 101-138 (193)
129 1opk_A P150, C-ABL, proto-onco 29.0 76 0.0026 25.2 4.7 54 57-118 45-100 (495)
130 3j20_R 30S ribosomal protein S 28.9 27 0.00093 25.0 1.9 19 49-67 79-97 (113)
131 1x43_A Endophilin B1, SH3 doma 28.8 1E+02 0.0035 18.8 4.8 37 83-119 38-76 (81)
132 1ue9_A Intersectin 2; beta bar 28.5 1E+02 0.0035 18.6 5.8 37 83-119 28-69 (80)
133 2cp2_A CLIP-115, KIAA0291; mic 28.3 22 0.00075 24.5 1.3 21 39-59 8-28 (95)
134 2iim_A Proto-oncogene tyrosine 28.2 90 0.0031 17.9 4.1 34 83-117 27-62 (62)
135 2jmc_A Spectrin alpha chain, b 28.1 32 0.0011 21.1 2.0 35 84-118 13-47 (77)
136 1j3t_A Intersectin 2; beta bar 28.1 1E+02 0.0034 18.5 4.3 36 83-119 31-66 (74)
137 1b07_A Protein (proto-oncogene 27.8 99 0.0034 18.3 4.2 36 82-117 23-59 (65)
138 1wie_A RIM binding protein 2; 27.3 59 0.002 20.8 3.2 64 54-119 16-82 (96)
139 2fei_A CD2-associated protein; 27.3 91 0.0031 18.6 3.9 31 89-119 28-58 (65)
140 1wzo_A HPCE; structural genomi 27.2 35 0.0012 25.8 2.4 31 73-104 204-234 (246)
141 2xzm_Q Ribosomal protein S17 c 27.1 31 0.0011 26.1 2.0 21 48-68 114-134 (157)
142 2cri_A Vesicle-associated memb 26.8 26 0.00088 24.6 1.5 47 65-111 51-99 (147)
143 3a8g_B NitrIle hydratase subun 26.5 25 0.00086 27.3 1.5 37 45-90 118-154 (212)
144 2gim_A Plastocyanin; beta shee 26.3 1.2E+02 0.0041 18.8 6.0 21 90-110 65-89 (106)
145 2zkq_q 40S ribosomal protein S 26.2 29 0.001 26.2 1.8 20 49-68 119-138 (158)
146 2aan_A Auracyanin A; cupredoxi 25.6 1.3E+02 0.0044 20.0 4.8 22 91-112 100-124 (139)
147 1tg0_A BBC1 protein, myosin ta 25.5 1.1E+02 0.0037 18.0 5.2 36 83-118 28-68 (68)
148 3bbn_Q Ribosomal protein S17; 25.4 28 0.00096 26.0 1.5 21 48-68 106-126 (142)
149 1nz9_A Transcription antitermi 25.4 25 0.00086 21.0 1.1 36 48-102 3-39 (58)
150 2yt6_A Adult MALE urinary blad 25.2 1.4E+02 0.0046 19.0 4.7 37 82-118 47-85 (109)
151 2ebp_A SAM and SH3 domain-cont 24.7 1.2E+02 0.0042 18.3 4.7 36 84-119 33-68 (73)
152 2lcs_A NAP1-binding protein 2; 24.6 1.2E+02 0.0042 18.3 5.4 37 83-119 26-64 (73)
153 2k9g_A SH3 domain-containing k 24.6 1.2E+02 0.004 18.0 5.4 26 94-119 43-68 (73)
154 2zkr_t 60S ribosomal protein L 24.3 76 0.0026 23.4 3.7 36 46-100 45-81 (145)
155 1csk_A C-SRC SH3 domain; phosp 24.3 1.2E+02 0.004 17.9 4.4 35 84-118 33-69 (71)
156 2k2m_A EPS8-like protein 1; al 24.2 1.2E+02 0.004 17.9 4.4 36 83-119 29-65 (68)
157 1wic_A Hypothetical protein ri 24.0 29 0.00099 24.8 1.3 44 65-111 55-100 (152)
158 1nkq_A Hypothetical 28.8 kDa p 24.0 46 0.0016 25.8 2.6 33 73-106 205-238 (259)
159 2vqe_Q 30S ribosomal protein S 23.9 25 0.00086 24.8 1.0 19 49-67 50-68 (105)
160 2lx7_A GAS-7, growth arrest-sp 23.2 72 0.0025 19.4 2.9 37 81-117 23-60 (60)
161 2dl7_A KIAA0769 protein; SH3 d 23.1 1.3E+02 0.0043 17.9 5.3 26 94-119 43-68 (73)
162 2wqt_A 2-keto-4-pentenoate hyd 23.1 30 0.001 26.6 1.3 31 73-104 222-252 (270)
163 2ct4_A CDC42-interacting prote 22.8 1.2E+02 0.0043 17.7 5.0 36 84-119 29-66 (70)
164 1x2q_A Signal transducing adap 22.8 1.4E+02 0.0049 18.4 8.2 38 82-119 37-74 (88)
165 2gnc_A SLIT-ROBO RHO GTPase-ac 22.8 1.2E+02 0.004 17.4 4.7 34 82-115 26-59 (60)
166 1whk_A 1700024K14RIK, riken cD 22.6 43 0.0015 22.7 1.9 17 43-59 6-22 (91)
167 1spk_A RSGI RUH-010, riken cDN 22.5 1.3E+02 0.0044 17.8 4.7 36 84-119 30-68 (72)
168 1wxb_A Epidermal growth factor 22.4 1.3E+02 0.0044 17.7 5.0 37 82-119 27-64 (68)
169 2zjr_R 50S ribosomal protein L 22.2 76 0.0026 22.3 3.2 35 47-100 13-47 (115)
170 1t60_A Type IV collagen; basem 22.0 21 0.00073 28.5 0.3 25 64-91 82-106 (229)
171 2kxc_A Brain-specific angiogen 21.8 1.3E+02 0.0044 17.5 4.0 25 94-118 40-66 (67)
172 2ege_A Uncharacterized protein 21.2 1.5E+02 0.005 17.9 4.5 61 57-119 9-72 (75)
173 1gbq_A GRB2; complex (signal t 21.1 1.4E+02 0.0048 17.9 3.9 24 95-118 43-66 (74)
174 1x69_A Cortactin isoform A; SH 21.0 1.5E+02 0.0051 17.9 7.9 65 47-119 9-74 (79)
175 2dl5_A KIAA0769 protein; SH3 d 21.0 1.5E+02 0.0051 17.9 4.9 36 84-119 35-72 (78)
176 3cvb_A Plastocyanin; cupredoxi 20.8 1E+02 0.0036 18.9 3.4 21 90-110 64-88 (105)
177 2bco_A Succinylglutamate desuc 20.7 1.3E+02 0.0046 23.7 4.7 61 47-113 284-345 (350)
178 2yuq_A Tyrosine-protein kinase 20.6 1.6E+02 0.0054 18.1 4.7 37 82-118 39-76 (85)
179 2csi_A RIM-BP2, RIM binding pr 20.4 1.5E+02 0.0052 17.8 5.2 61 57-119 9-72 (76)
180 2dfu_A Probable 2-hydroxyhepta 20.2 50 0.0017 25.5 2.0 31 73-104 218-248 (264)
181 2o2o_A SH3-domain kinase-bindi 20.1 49 0.0017 21.5 1.7 27 93-119 49-75 (92)
No 1
>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...
Probab=78.86 E-value=5.7 Score=23.02 Aligned_cols=37 Identities=24% Similarity=0.507 Sum_probs=25.9
Q ss_pred CCCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCC
Q 033358 82 KPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLE 118 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~ 118 (121)
+.||.=.|+.....+-|.++...-.=++++.|+++++
T Consensus 26 ~~Gd~i~v~~~~~~~Ww~~~~~g~~G~~P~~yv~~~d 62 (62)
T 3ngp_A 26 KKGDILTLLNSTNKDWWKIEVNGRQGFVPAAYLKKLD 62 (62)
T ss_dssp CTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEECC
T ss_pred CCCCEEEEeEecCCCeEEEEECCEEEEEEHHHEEECC
Confidence 3455555555555678888876556788999998875
No 2
>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=75.12 E-value=4 Score=24.54 Aligned_cols=39 Identities=13% Similarity=0.229 Sum_probs=28.8
Q ss_pred CCCCeeeEeeecCCCEEEEEEccee-EEeeCCccccCCCC
Q 033358 82 KPGDVGRIISRKPKDVWAVRLSIGT-YLLEGKYFKPLELD 120 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF~rGt-FLid~~yl~~~~~~ 120 (121)
+.||+=.|+.....|-|.++...|. =++++.|++.++..
T Consensus 27 ~~Gd~i~v~~~~~~~Ww~g~~~~~~~G~~P~~yv~~~~~~ 66 (69)
T 2eqi_A 27 CRGALIHNVSKEPGGWWKGDYGTRIQQYFPSNYVEDISGP 66 (69)
T ss_dssp CTTCEEESCCCCSSSCEEEEETTEEEEEECGGGEEECCSC
T ss_pred CCCCEEEEEEcCCCCeEEEEECCCCEEEEchHHcEECccC
Confidence 3344444555556789999999888 79999999988643
No 3
>1qp2_A Protein (PSAE protein); mainly beta, roll, pleckstrin topology, SH3-like, electron T; NMR {Nostoc SP} SCOP: b.34.4.2 PDB: 1qp3_A
Probab=71.90 E-value=3.5 Score=27.99 Aligned_cols=32 Identities=28% Similarity=0.284 Sum_probs=25.7
Q ss_pred ccCCCCccCCCCeeeEeeecCCCE---EEEEEcceeE
Q 033358 74 LRANSGLVKPGDVGRIISRKPKDV---WAVRLSIGTY 107 (121)
Q Consensus 74 LRPp~dLV~~gE~G~Iv~rrP~d~---waVRF~rGtF 107 (121)
||| +=.=-+|+|.|.+.--++. ..|||..+.|
T Consensus 11 lr~--eSywy~~vG~V~~Vd~~~~~ypV~VrFekvNy 45 (70)
T 1qp2_A 11 LRP--ESYWFQDVGTVASVDQSGIKYPVIVRFEKVNY 45 (70)
T ss_dssp CCT--TSTTTTCEEEEEEECCSSCSCSEEEECSSCCS
T ss_pred cCc--cceeecceeEEEEEeCCCcEeeEEEEeccccc
Confidence 667 3455689999999988752 8999999987
No 4
>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A
Probab=70.55 E-value=13 Score=21.48 Aligned_cols=37 Identities=14% Similarity=0.270 Sum_probs=26.5
Q ss_pred CCCCeeeEeeec-CCCEEEEEEcceeEEeeCCccccCC
Q 033358 82 KPGDVGRIISRK-PKDVWAVRLSIGTYLLEGKYFKPLE 118 (121)
Q Consensus 82 ~~gE~G~Iv~rr-P~d~waVRF~rGtFLid~~yl~~~~ 118 (121)
+.||+=.|+... .++-|.+|.....=++++.|+++++
T Consensus 25 ~~Gd~i~v~~~~~~~~W~~~~~~g~~G~~P~~yv~~~~ 62 (63)
T 3eg3_A 25 TKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSAYITPVN 62 (63)
T ss_dssp CTTCEEEEEEECTTSSEEEEEETTEEEEEEGGGEEESC
T ss_pred CCCCEEEEEEeCCCCCeEEEEECCCeEEEehHHeEECC
Confidence 445555566643 3568888887667788999999875
No 5
>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*
Probab=69.73 E-value=11 Score=22.54 Aligned_cols=37 Identities=22% Similarity=0.422 Sum_probs=25.1
Q ss_pred CCCCeeeEeeecCCCEEEEEE--cceeEEeeCCccccCC
Q 033358 82 KPGDVGRIISRKPKDVWAVRL--SIGTYLLEGKYFKPLE 118 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF--~rGtFLid~~yl~~~~ 118 (121)
+.||+=.|+.....+-|.++. ..-.=+++..|+++++
T Consensus 35 ~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~ 73 (73)
T 3h0h_A 35 HKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAPVD 73 (73)
T ss_dssp CTTCEEEEEECSSSSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred eCCCEEEEEEecCCCeEEEEECCCCCEEEEEHHHeEECC
Confidence 445555566666678888887 3334577899998874
No 6
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A
Probab=69.53 E-value=13 Score=21.63 Aligned_cols=36 Identities=6% Similarity=0.131 Sum_probs=25.9
Q ss_pred CCCeeeEeeecCCCEEEEEEcceeE-EeeCCccccCC
Q 033358 83 PGDVGRIISRKPKDVWAVRLSIGTY-LLEGKYFKPLE 118 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVRF~rGtF-Lid~~yl~~~~ 118 (121)
.||+=.|+.....|-|..+...+.= ++++.|++++.
T Consensus 24 ~Gd~i~v~~~~~~~W~~g~~~g~~gG~~P~~yv~~~~ 60 (61)
T 1y0m_A 24 KSAIIQNVEKQDGGWWRGDYGGKKQLWFPSNYVEEMI 60 (61)
T ss_dssp TTCEEEEEECCSSSEEEEEETTEEEEEEEGGGEEECC
T ss_pred CCCEEEEEEecCCCEEEEEECCeEEEEEChHHcEECC
Confidence 3444445555567889999877776 89999998864
No 7
>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A
Probab=69.21 E-value=14 Score=21.18 Aligned_cols=36 Identities=14% Similarity=0.258 Sum_probs=24.7
Q ss_pred CCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCC
Q 033358 83 PGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLE 118 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~ 118 (121)
.||+=.|+.....+.|.++...-.=++++.|+++++
T Consensus 23 ~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 58 (58)
T 2vwf_A 23 RGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTAVN 58 (58)
T ss_dssp TTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEECC
T ss_pred CCCEEEEEEcCCCCEEEEEECCcEEEEchHHeEECC
Confidence 344444444445678888886556788999998864
No 8
>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1
Probab=68.20 E-value=15 Score=22.04 Aligned_cols=38 Identities=26% Similarity=0.466 Sum_probs=27.6
Q ss_pred CCCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 82 KPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
..||+=.|+.....+-|.++...-.=+++..|++.++.
T Consensus 25 ~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~ 62 (73)
T 3thk_A 25 KKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDP 62 (73)
T ss_dssp CTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEECCC
T ss_pred CCCCEEEEEECCCCCeEEEEECCcEEEEehHHeEECCC
Confidence 44555556666567889998776677889999988763
No 9
>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A
Probab=68.14 E-value=14 Score=21.07 Aligned_cols=36 Identities=22% Similarity=0.433 Sum_probs=24.6
Q ss_pred CCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCC
Q 033358 83 PGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLE 118 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~ 118 (121)
.||+=.|+.....|-|.++...-.=++++.|+++++
T Consensus 23 ~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 58 (58)
T 1sem_A 23 RGDVITLINKDDPNWWEGQLNNRRGIFPSNYVCPYN 58 (58)
T ss_dssp TTCEEEEEECSSSSEEEEEETTEEEEEEGGGEEECC
T ss_pred CCCEEEEEEecCCCEEEEEECCcEEEechHHeEECC
Confidence 344444444445678888886556788999998764
No 10
>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A
Probab=68.12 E-value=15 Score=21.46 Aligned_cols=37 Identities=16% Similarity=0.135 Sum_probs=25.3
Q ss_pred CCCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCC
Q 033358 82 KPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLE 118 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~ 118 (121)
+.||+=.|+.....+-|..+...-.=++++.|++.++
T Consensus 29 ~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 65 (65)
T 3ulr_B 29 DPDDIITNIEMIDDGWWRGVCKGRYGLFPANYVELRQ 65 (65)
T ss_dssp CTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEECC
T ss_pred ecCCEEEEEEecCCCEEEEEECCcEEEEehHHeEECC
Confidence 3455555565556678888865555678999988764
No 11
>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A
Probab=67.27 E-value=14 Score=21.36 Aligned_cols=38 Identities=26% Similarity=0.359 Sum_probs=25.4
Q ss_pred CCCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 82 KPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
+.||+=.|+.....+-|..+...-.=++++.|++.++.
T Consensus 27 ~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~~~~ 64 (65)
T 3u23_A 27 KVGDIIDINEEVEEGWWSGTLNNKLGLFPSNFVKELEV 64 (65)
T ss_dssp CTTCEEEEEEEEETTEEEEEETTEEEEEEGGGEEECC-
T ss_pred CCCCEEEEEEecCCCEEEEEECCCEEEeehHHEEECcC
Confidence 44555556666567788888654444778999988764
No 12
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=67.20 E-value=11 Score=24.09 Aligned_cols=55 Identities=15% Similarity=0.152 Sum_probs=38.8
Q ss_pred ccccccccCCcEEEEecCCceecCCccccccCCCCccCCCCeeeEeeecCCCEEEEEE---cceeEEee
Q 033358 45 IRRSKLAIGSPVIVIEAPKMIKTAASVPCLRANSGLVKPGDVGRIISRKPKDVWAVRL---SIGTYLLE 110 (121)
Q Consensus 45 ~~~~~~~IG~~Vrli~~ppYLKTAdpMPMLRPp~dLV~~gE~G~Iv~rrP~d~waVRF---~rGtFLid 110 (121)
+..-.++.|++|+++ ++-.|.++ .-+.+.+.|.=....|+..+.+.| .-|+|..-
T Consensus 27 P~~i~v~~G~tV~~~-----~~n~d~~~------H~~~~~~~~~~~~~~pg~~~~~~~t~~~~G~Y~y~ 84 (100)
T 4hci_A 27 PNVITIPINESTTLL-----LKNKGKSE------HTFTIKKLGIDVVVESGKEKNITVKPKSAGTYELI 84 (100)
T ss_dssp SSEEEECTTSCEEEE-----EEECSSSC------EEEEEGGGTEEEEECTTCEEEEEECCCSCEEEEEE
T ss_pred CCEEEECCCCEEEEE-----EEcCCCce------EEEEEecCCcceeecCCcceeEEEecccCceEEEE
Confidence 566789999999986 45556554 224445556666788999998888 36888653
No 13
>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=66.96 E-value=20 Score=22.23 Aligned_cols=38 Identities=16% Similarity=0.172 Sum_probs=29.0
Q ss_pred CCCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 82 KPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
+.||+=.|+.....|-|.+|...-.=++++.|+++++.
T Consensus 28 ~~Gd~i~vl~~~~~gWw~g~~~g~~G~~P~~yv~~~~~ 65 (80)
T 2ekh_A 28 PAGVEVQVLEKQESGWWYVRFGELEGWAPSHYLVLDEN 65 (80)
T ss_dssp CTTCEEEEEEECTTSEEEEEETTEEEEEETTTEECCCC
T ss_pred CCCCEEEEEEeCCCCeEEEEECCCEEEEEhHHeEECCC
Confidence 45566666666677899999876667899999998764
No 14
>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A
Probab=66.53 E-value=16 Score=20.96 Aligned_cols=35 Identities=23% Similarity=0.439 Sum_probs=24.0
Q ss_pred CCeeeEeeecCCCEEEEEEcceeEEeeCCccccCC
Q 033358 84 GDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLE 118 (121)
Q Consensus 84 gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~ 118 (121)
||+=.|+.....|-|.++...-.=++++.|+++++
T Consensus 23 Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 57 (58)
T 1uti_A 23 GEVVEVLDSSNPSWWTGRLHNKLGLFPANYVAPMM 57 (58)
T ss_dssp TCEEEEEECCSSSEEEEEETTEEEEEEGGGEEECC
T ss_pred CCEEEEEEECCCCEEEEEECCeEEEeeHHHeEEcc
Confidence 44444444445678888886556688999998875
No 15
>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A
Probab=65.54 E-value=18 Score=21.16 Aligned_cols=38 Identities=16% Similarity=0.214 Sum_probs=27.3
Q ss_pred CCCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 82 KPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
+.||+=.|+.....|.|.++...-.=++++.|++.++.
T Consensus 26 ~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~ 63 (64)
T 2ak5_A 26 SKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREIKP 63 (64)
T ss_dssp CTTCEEEEEECCTTSEEEEEETTEEEEEEGGGEEECCC
T ss_pred CCCCEEEEeEecCCCEEEEEECCCEEEEehHHeEEcCC
Confidence 34455455555567888888866667889999998764
No 16
>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A
Probab=64.88 E-value=19 Score=21.37 Aligned_cols=37 Identities=19% Similarity=0.200 Sum_probs=25.6
Q ss_pred CCCeeeEeeecCCCEEEEEEc--ceeEEeeCCccccCCC
Q 033358 83 PGDVGRIISRKPKDVWAVRLS--IGTYLLEGKYFKPLEL 119 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVRF~--rGtFLid~~yl~~~~~ 119 (121)
.||.=.|+.....|.|-++.. .-.=++++.|+++++.
T Consensus 24 ~Gd~i~v~~~~~~~W~~g~~~~~g~~G~~P~~yv~~~~~ 62 (69)
T 1ruw_A 24 KGDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTPYKD 62 (69)
T ss_dssp TTCEEEEEEECTTSEEEEEETTSSCEEEEEGGGEEECCS
T ss_pred CCCEEEEEEecCCCeEEEEECCCCCEEEEehHHeEEcCC
Confidence 344445555556678888887 3456889999998764
No 17
>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}
Probab=64.84 E-value=17 Score=21.51 Aligned_cols=38 Identities=18% Similarity=0.100 Sum_probs=26.7
Q ss_pred CCCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 82 KPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
+.||+=.|+.....|-|..+...-.=++++.|++.++.
T Consensus 33 ~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~~~~ 70 (72)
T 4glm_A 33 EVGDKIRILATLEDGWLEGSLKGRTGIFPYRFVKLCPA 70 (72)
T ss_dssp CTTCEEEEEEECSTTEEEEEETTEEEEEEGGGEEEEC-
T ss_pred CCCCEEEEEEccCCCEEEEEECCcEEEEChHHeEECCC
Confidence 44555556666667888888765566889999988754
No 18
>2pqh_A Spectrin alpha chain, brain; SH3 domain, chimera, , structural protein; 1.75A {Gallus gallus}
Probab=62.24 E-value=21 Score=22.09 Aligned_cols=37 Identities=24% Similarity=0.450 Sum_probs=25.3
Q ss_pred CCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 83 PGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
.||+=.|+.....|.|.++.....=++.+.|++.++.
T Consensus 23 ~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~ 59 (80)
T 2pqh_A 23 KGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDP 59 (80)
T ss_dssp TTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEECCC
T ss_pred CCCEEEEEEecCCCEEEEEECCcEEEEehHHeEEcCC
Confidence 3444444444457788888866667889999988754
No 19
>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1
Probab=61.89 E-value=22 Score=21.04 Aligned_cols=38 Identities=26% Similarity=0.468 Sum_probs=28.7
Q ss_pred CCCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 82 KPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
+.||+=.|+.....|-|.++..--.=++++.|++.++.
T Consensus 9 ~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~ 46 (63)
T 1tuc_A 9 KKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDS 46 (63)
T ss_dssp CTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEECSC
T ss_pred CCCCEEEEEEecCCCEEEEEECCcEEEEeHHHEEEcCC
Confidence 45666666776678899998766667889999988753
No 20
>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}
Probab=61.38 E-value=21 Score=20.52 Aligned_cols=35 Identities=11% Similarity=0.311 Sum_probs=23.8
Q ss_pred CCeeeEeeecCCCEEEEEEcceeEEeeCCccccCC
Q 033358 84 GDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLE 118 (121)
Q Consensus 84 gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~ 118 (121)
||+=.|+.....|-|..+...-.=++++.|+++++
T Consensus 23 Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 57 (58)
T 2bz8_A 23 GEIITNIRKEDGGWWEGQINGRRGLFPDNFVREIK 57 (58)
T ss_dssp TCEEEEEECCTTTEEEEEETTEEEEEEGGGEEECC
T ss_pred CCEEEEEEeCCCCEEEEEECCeEEEEehHHeEEcC
Confidence 44444444445678888886556688999998764
No 21
>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...
Probab=61.09 E-value=22 Score=22.42 Aligned_cols=38 Identities=24% Similarity=0.420 Sum_probs=25.8
Q ss_pred CCCCeeeEeeecCCCEEEEEE--cceeEEeeCCccccCCC
Q 033358 82 KPGDVGRIISRKPKDVWAVRL--SIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF--~rGtFLid~~yl~~~~~ 119 (121)
..||+=.|+.....|-|.+|. ..-.=++++.|+++++.
T Consensus 26 ~~Gd~i~vl~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~ 65 (84)
T 4ag1_C 26 HKGEKFQILEFGPGDWWEARSLTTGETGYIPSNYVAPVDS 65 (84)
T ss_dssp CTTCEEEEEECCSSSEEEEEETTTCCEEEEEGGGEEETTT
T ss_pred cCCCEEEEEEecCCCeEEEEECCCCCEEEEehHHeEECCC
Confidence 445555566655677888888 33345779999988764
No 22
>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.03 E-value=25 Score=21.48 Aligned_cols=39 Identities=26% Similarity=0.258 Sum_probs=28.6
Q ss_pred CCCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCCC
Q 033358 82 KPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLELD 120 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~~ 120 (121)
+.||+=.|+.....|.|.++...-.=+++..|++.++..
T Consensus 30 ~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~ 68 (76)
T 2epd_A 30 RRGDVLRLHERASSDWWRGEHNGMRGLIPHKYITLPAGT 68 (76)
T ss_dssp CTTCEEEEEEEEETTEEEEEETTEEEEEESSSEECCSSC
T ss_pred CCCCEEEEEEeCCCCEEEEEECCcEEEEehHHEEEcCCC
Confidence 445555666665688999998665678899999987643
No 23
>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A
Probab=60.94 E-value=22 Score=20.60 Aligned_cols=36 Identities=25% Similarity=0.486 Sum_probs=23.0
Q ss_pred CCCeeeEeeecCCCEEEEEEc--------ceeEEeeCCccccCC
Q 033358 83 PGDVGRIISRKPKDVWAVRLS--------IGTYLLEGKYFKPLE 118 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVRF~--------rGtFLid~~yl~~~~ 118 (121)
.||+=.|+.....|-|.++.. .-.=++++.|+++++
T Consensus 22 ~Gd~i~v~~~~~~~Ww~g~~~~~~~g~~~g~~G~~P~~yv~~l~ 65 (65)
T 2oaw_A 22 KGDILTLLNSTNKDWWKVEVKITVNGKTYERQGFVPAAYVKKLD 65 (65)
T ss_dssp TTCEEEEEECCSSSEEEEEEEEEETTEEEEEEEEEEGGGEEECC
T ss_pred CCCEEEEEEcCCCCEEEEEEccccCCCcCCcEEEEchHHeEEcC
Confidence 344444455445778888876 223477899998764
No 24
>1w1f_A Tyrosine-protein kinase LYN; SH3-domain, SH3 domain, tyrosine kinase, signal transduction; NMR {Homo sapiens} PDB: 1wa7_A
Probab=60.92 E-value=22 Score=20.71 Aligned_cols=36 Identities=14% Similarity=0.386 Sum_probs=26.6
Q ss_pred CCCCeeeEeeecCCCEEEEEE--cceeEEeeCCccccCC
Q 033358 82 KPGDVGRIISRKPKDVWAVRL--SIGTYLLEGKYFKPLE 118 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF--~rGtFLid~~yl~~~~ 118 (121)
+.||+=.|+... .|-|.++. ..-.=++++.|+++++
T Consensus 27 ~~Gd~i~v~~~~-~~Ww~g~~~~~g~~G~~P~~yv~~~~ 64 (65)
T 1w1f_A 27 KKGEKMKVLEEH-GEWWKAKSLLTKKEGFIPSNYVAKLN 64 (65)
T ss_dssp CTTCEEEEEEEC-SSEEEEEETTTCCEEEEETTTEESCC
T ss_pred CCCCEEEEEEcC-CCEEEEEECCCCCEEEEEhhHEEECc
Confidence 456666666666 88899988 4445688999999875
No 25
>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}
Probab=60.88 E-value=24 Score=20.99 Aligned_cols=38 Identities=21% Similarity=0.356 Sum_probs=27.3
Q ss_pred CCCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 82 KPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
+.||+=.|+.....+-|.++...-.=++++.|++.++.
T Consensus 28 ~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~ 65 (69)
T 2dil_A 28 SAGDILEVILEGEDGWWTVERNGQRGFVPGSYLEKLSG 65 (69)
T ss_dssp CTTCEEEEEECCSSSEEEEEETTEEEEEEGGGCCBCCC
T ss_pred CCCCEEEEEECCCCCEEEEEECCCEEEEehHHeEEcCC
Confidence 33455455555567889898876667889999998864
No 26
>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=59.76 E-value=25 Score=20.95 Aligned_cols=37 Identities=16% Similarity=0.384 Sum_probs=25.4
Q ss_pred CCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 83 PGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
.||+=.|+.....+.|.++...-.=++++.|++.++.
T Consensus 28 ~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~ 64 (68)
T 2dl4_A 28 PGDIITLLEDSNEDWWKGKIQDRIGFFPANFVQRLSG 64 (68)
T ss_dssp TTCEEEEEECCCSSEEEEECSSCEEEEETTTEEECCC
T ss_pred CCCEEEEEEeCCCCEEEEEECCcEEEEehHHeEECCC
Confidence 3444445554456788888655567889999998864
No 27
>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A
Probab=59.36 E-value=23 Score=20.35 Aligned_cols=37 Identities=14% Similarity=0.050 Sum_probs=22.6
Q ss_pred CCCCeeeEeeecCCCEEEEEEc--ceeEEeeCCccccCC
Q 033358 82 KPGDVGRIISRKPKDVWAVRLS--IGTYLLEGKYFKPLE 118 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF~--rGtFLid~~yl~~~~ 118 (121)
+.||+=.|+.....+-|..+.. .-.=++++.|+++++
T Consensus 26 ~~Gd~i~v~~~~~~~W~~g~~~~~g~~G~~P~~yv~~~~ 64 (64)
T 4f14_A 26 RDGDYIVNVQPIDDGWMYGTVQRTGRTGMLPANYIEFVN 64 (64)
T ss_dssp CTTCEEEEEEECSSSEEEEEETTTTEEEEEEGGGEEEC-
T ss_pred CCCCEEEEEEeCCCCeEEEEECCCCCEEEEeHHHeEECc
Confidence 3344444555556678888883 333467888888764
No 28
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=59.05 E-value=18 Score=23.31 Aligned_cols=57 Identities=11% Similarity=0.135 Sum_probs=36.7
Q ss_pred ccccccccCCcEEEEecCCceecCCccccccCCCCccCCCCeeeEeeecCCCEEEEEE---cceeEEeeCC
Q 033358 45 IRRSKLAIGSPVIVIEAPKMIKTAASVPCLRANSGLVKPGDVGRIISRKPKDVWAVRL---SIGTYLLEGK 112 (121)
Q Consensus 45 ~~~~~~~IG~~Vrli~~ppYLKTAdpMPMLRPp~dLV~~gE~G~Iv~rrP~d~waVRF---~rGtFLid~~ 112 (121)
...-.++.|++|++. ++-.|.+ + .=+.+.+.|.=....||..+.+.| .-|+|..--.
T Consensus 37 p~~i~v~~G~~V~~~-----~~n~d~~----~--H~~~i~~~~~~~~i~pG~~~~~~f~~~~~G~y~~~C~ 96 (112)
T 1iby_A 37 PETLVVKKGDAVKVV-----VENKSPI----S--EGFSIDAFGVQEVIKAGETKTISFTADKAGAFTIWCQ 96 (112)
T ss_dssp SCEEEEETTCEEEEE-----EEECSSS----C--EEEEEGGGTEEEEECTTCEEEEEEECCSCEEEEEBCS
T ss_pred CCEEEEeCCCEEEEE-----EEECCCC----e--EEEEEcCCCceeEeCCCCEEEEEEECCCCEEEEEECC
Confidence 455678999999974 2223332 1 112233445566789999999999 5699876443
No 29
>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A
Probab=56.91 E-value=26 Score=20.12 Aligned_cols=35 Identities=20% Similarity=0.098 Sum_probs=22.0
Q ss_pred CCeeeEeeecCCCEEEEEEc--ceeEEeeCCccccCC
Q 033358 84 GDVGRIISRKPKDVWAVRLS--IGTYLLEGKYFKPLE 118 (121)
Q Consensus 84 gE~G~Iv~rrP~d~waVRF~--rGtFLid~~yl~~~~ 118 (121)
||+=.|+.....|-|..+.. .-.=++++.|++.++
T Consensus 22 Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~ 58 (58)
T 1jo8_A 22 NDKIINIEFVDDDWWLGELEKDGSKGLFPSNYVSLGN 58 (58)
T ss_dssp TCEEEEEECCSSSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred CCEEEEEEecCCCcEEEEECCCCCEEEechHHeEECC
Confidence 34434444445678888876 334577888888764
No 30
>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}
Probab=55.81 E-value=26 Score=20.71 Aligned_cols=38 Identities=16% Similarity=0.302 Sum_probs=26.8
Q ss_pred cCCCCeeeEeeecCCCEEEEEEcce-eEEeeCCccccCC
Q 033358 81 VKPGDVGRIISRKPKDVWAVRLSIG-TYLLEGKYFKPLE 118 (121)
Q Consensus 81 V~~gE~G~Iv~rrP~d~waVRF~rG-tFLid~~yl~~~~ 118 (121)
++.||+=.|+.....|-|.+|...| .=++++.|+++++
T Consensus 25 ~~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~ 63 (69)
T 4esr_A 25 IHRGDIIRVFFKDNEDWWYGSIGKGQEGYFPANHVASET 63 (69)
T ss_dssp BCTTCEEEEEEECSSSEEEEEEETTEEEEEEGGGEEEHH
T ss_pred CCCCCEEEEEEecCCCeEEEEeCCCCEEEEchHHeEECc
Confidence 3456666677766788999998443 5577888988753
No 31
>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A
Probab=55.48 E-value=27 Score=20.05 Aligned_cols=36 Identities=17% Similarity=0.236 Sum_probs=24.8
Q ss_pred CCCCeeeEeeecCCCEEEEEEcceeEEeeCCccccC
Q 033358 82 KPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPL 117 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~ 117 (121)
+.||+=.|+.....|-|.++...-.=++++.|++++
T Consensus 24 ~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~l 59 (59)
T 2g6f_X 24 SKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREI 59 (59)
T ss_dssp CTTCEEEEEEECTTSEEEEEETTEEEEEEGGGEEEC
T ss_pred CCCCEEEEEEecCCCEEEEEECCcEEEEeHHHEEEC
Confidence 345555555555678888887655668888888764
No 32
>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=55.10 E-value=25 Score=21.20 Aligned_cols=38 Identities=18% Similarity=0.283 Sum_probs=26.3
Q ss_pred CCCCeeeEeeecCCCEEEEEEcc--ee-------EEeeCCccccCCC
Q 033358 82 KPGDVGRIISRKPKDVWAVRLSI--GT-------YLLEGKYFKPLEL 119 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF~r--Gt-------FLid~~yl~~~~~ 119 (121)
+.||+=.|+.....|-|.++..+ |. =++++.|+++++.
T Consensus 27 ~~Gd~i~v~~~~~~~Ww~g~~~~~~g~~~~~~~~G~~P~~yv~~~~~ 73 (77)
T 2d8j_A 27 RAGDKLQVLDTSHEGWWLARHLEKKGTGLGQQLQGYIPSNYVAEDSG 73 (77)
T ss_dssp CTTCCEEEEECCSSSEEEEEECSSCCSSCCCCSEEEEETTTEEECCC
T ss_pred CCCCEEEEEECCCCCeEEEEECCCCCcCcccCCceEECHHHeeEcCC
Confidence 33444455555567889998885 54 5889999998763
No 33
>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}
Probab=54.75 E-value=33 Score=20.71 Aligned_cols=38 Identities=26% Similarity=0.468 Sum_probs=26.9
Q ss_pred CCCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 82 KPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
+.||+=.|+.....|-|.++...-.=++++.|+++++.
T Consensus 19 ~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~ 56 (73)
T 2kxd_A 19 KKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDS 56 (73)
T ss_dssp CTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEECCS
T ss_pred cCCCEEEEEEecCCCEEEEEECCCEEEEehHHeEEcCC
Confidence 34555555655567888888665567889999988764
No 34
>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.39 E-value=31 Score=20.45 Aligned_cols=37 Identities=16% Similarity=0.197 Sum_probs=26.0
Q ss_pred CCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 83 PGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
.||+=.|+.....|-|-++...-.=++++.|+++++.
T Consensus 29 ~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~ 65 (71)
T 2dnu_A 29 KGVTVEVIRKNLEGWWYIRYLGKEGWAPASYLKKAKD 65 (71)
T ss_dssp TTCEEEECCCCSSSEEEEEETTEEEEEEGGGCEECCC
T ss_pred CCCEEEEeECCCCCeEEEEECCcEEEEEHHHeEEccC
Confidence 3444444444457889998885567889999998764
No 35
>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}
Probab=54.17 E-value=32 Score=20.38 Aligned_cols=37 Identities=8% Similarity=0.107 Sum_probs=26.1
Q ss_pred CCCeeeEeeecCCCEEEEEEcc--eeEEeeCCccccCCC
Q 033358 83 PGDVGRIISRKPKDVWAVRLSI--GTYLLEGKYFKPLEL 119 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVRF~r--GtFLid~~yl~~~~~ 119 (121)
.||+=.|+.....+.|.++... -.=++++.|++.++.
T Consensus 28 ~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~ 66 (70)
T 2ecz_A 28 KGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVISG 66 (70)
T ss_dssp TTCBCEEEEEEETTEEEEEETTTTEEEEECTTTEEESSS
T ss_pred CCCEEEEEEecCCCeEEEEECCCCCEEEEchHHEEECCC
Confidence 3444455555567889999876 456889999998764
No 36
>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.95 E-value=31 Score=20.53 Aligned_cols=37 Identities=19% Similarity=0.321 Sum_probs=25.7
Q ss_pred CCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 83 PGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
.||+=.|+.....|-|.++...-.=++++.|+++++.
T Consensus 29 ~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~ 65 (70)
T 2ega_A 29 AGEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQNS 65 (70)
T ss_dssp TTCBCEEEEECTTSEEEEECSSCEEEEEGGGCEESCC
T ss_pred CCCEEEEEEccCCCeEEEEECCCEEEEehHHcEECCC
Confidence 3444455555567888888765566889999998763
No 37
>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A
Probab=51.65 E-value=35 Score=21.01 Aligned_cols=37 Identities=14% Similarity=0.305 Sum_probs=26.1
Q ss_pred CCCCeeeEeeecCCCEEEEEE--cceeEEeeCCccccCCC
Q 033358 82 KPGDVGRIISRKPKDVWAVRL--SIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF--~rGtFLid~~yl~~~~~ 119 (121)
+.||+=.|+... .|-|.++. ..-.=++.+.|++.++.
T Consensus 45 ~~Gd~i~v~~~~-~~Ww~g~~~~~g~~G~~P~~yv~~~~~ 83 (86)
T 2oi3_A 45 QKGDQMVVLEES-GEWWKARSLATRKEGYIPSNYVARVDS 83 (86)
T ss_dssp CTTCEEEEEEES-SSEEEEEETTTCCEEEEEGGGEEEGGG
T ss_pred CCCCEEEEEEcC-CCeEEEEECCCCCEEEEehHHcEEccc
Confidence 445555566655 68899998 44456889999998753
No 38
>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=51.30 E-value=39 Score=20.55 Aligned_cols=37 Identities=24% Similarity=0.316 Sum_probs=24.4
Q ss_pred CCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 83 PGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
.||+=.|+.....+.|..+...-.=+++..|++.++.
T Consensus 28 ~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~ 64 (78)
T 2yuo_A 28 KNDIITIISQKDEHCWVGELNGLRGWFPAKFVEVLDE 64 (78)
T ss_dssp TTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEEECC
T ss_pred CCCEEEEEEecCCCEEEEEECCCEEEEehHHEEECCC
Confidence 3444444444556778888765556889999987753
No 39
>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.13 E-value=33 Score=20.28 Aligned_cols=36 Identities=11% Similarity=0.037 Sum_probs=24.8
Q ss_pred CCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCC
Q 033358 83 PGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLE 118 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~ 118 (121)
.||+=.|+.....|.|.+|...-.=++++.|++.+.
T Consensus 28 ~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 63 (68)
T 1x2p_A 28 RGEKILILRQTTADWWWGERAGCCGYIPANHVGKHS 63 (68)
T ss_dssp TTCEEEEEECCSSSEEEEECTTCCEEEESSSEECCC
T ss_pred CCCEEEEEEcCCCCEEEEEECCeEEEEehHHeEECC
Confidence 344445555556778888876555678999998765
No 40
>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A
Probab=51.02 E-value=33 Score=19.63 Aligned_cols=35 Identities=20% Similarity=0.358 Sum_probs=23.2
Q ss_pred CCCeeeEeeecCCCEEEEEEcceeEEeeCCccccC
Q 033358 83 PGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPL 117 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~ 117 (121)
.||+=.|+.....|-|.++...-.=++++.|++++
T Consensus 23 ~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~ 57 (58)
T 1zx6_A 23 PGDKVQLLEKLSPEWYKGSCNGRTGIFPANYVKPA 57 (58)
T ss_dssp TTCEEEEEEECSSSEEEEEETTEEEEEEGGGEEEC
T ss_pred CCCEEEEEEecCCCEEEEEECCcEEEeeHHHEEEc
Confidence 34444444444567888887655668889998864
No 41
>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}
Probab=50.86 E-value=33 Score=20.40 Aligned_cols=37 Identities=16% Similarity=0.289 Sum_probs=24.9
Q ss_pred CCCCeeeEeeecCCCEEEEE-EcceeEEeeCCccccCCC
Q 033358 82 KPGDVGRIISRKPKDVWAVR-LSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVR-F~rGtFLid~~yl~~~~~ 119 (121)
+.||+=.|+... .|.|.+| ...-.=++++.|++.++.
T Consensus 27 ~~Gd~i~v~~~~-~~Ww~~~~~~g~~G~~P~~yv~~~~~ 64 (68)
T 1wxt_A 27 VQGEKLEVLDHS-KRWWLVKNEAGRSGYIPSNILEPLSG 64 (68)
T ss_dssp CTTCEEEEEECS-SSEEEEECTTSCEEEEEGGGEECCCC
T ss_pred CCCCEEEEEEcC-CCEEEEEECCCCEEEEEhHHcEECCC
Confidence 345555555554 6788888 444446889999998764
No 42
>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}
Probab=50.80 E-value=34 Score=19.71 Aligned_cols=36 Identities=25% Similarity=0.427 Sum_probs=24.1
Q ss_pred CCCCeeeEeeecCCCEEEEEEcceeEEeeCCccccC
Q 033358 82 KPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPL 117 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~ 117 (121)
+.||+=.|+.....|.|.++...-.=++++.|++.+
T Consensus 25 ~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~l 60 (60)
T 2xmf_A 25 NANDIIDIIKEDPSGWWTGRLRGKQGLFPNNYVTKI 60 (60)
T ss_dssp CTTCEEEEEEECTTSEEEEEETTEEEEEEGGGEEEC
T ss_pred CCCCEEEEEEecCCCEEEEEECCEEEEEcHHHEEEC
Confidence 345555555555678888888554567788888764
No 43
>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A
Probab=50.69 E-value=34 Score=21.32 Aligned_cols=36 Identities=22% Similarity=0.404 Sum_probs=21.2
Q ss_pred CCeeeEeeecCCCEEEEEE--cceeEEeeCCccccCCC
Q 033358 84 GDVGRIISRKPKDVWAVRL--SIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 84 gE~G~Iv~rrP~d~waVRF--~rGtFLid~~yl~~~~~ 119 (121)
||+=.|+.....|-|.++- ..-.=++++.|+++++.
T Consensus 27 Gd~i~vl~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~ 64 (79)
T 3cqt_A 27 GEKFQILNSSEGDWWEARSLTTGETGYIPSIYLAPVDR 64 (79)
T ss_dssp TCEEEEEECTTSSEEEEEETTTCCEEEEEGGGEEEC--
T ss_pred CCEEEEEEecCCCeEEEEECCCCCEEEeehHHeEECCc
Confidence 3333344444467788887 33345778999988763
No 44
>4fm4_B NitrIle hydratase beta subunit; iron type hydratase, hydrolysis, sulfinic acid, lyase; 2.38A {Comamonas testosteroni}
Probab=50.18 E-value=23 Score=27.27 Aligned_cols=48 Identities=15% Similarity=0.149 Sum_probs=33.1
Q ss_pred cccccCCcEEEEecCCceecCCccccccCCCCccCCCCeeeEeeec----------------CCCEEEEEEcc
Q 033358 48 SKLAIGSPVIVIEAPKMIKTAASVPCLRANSGLVKPGDVGRIISRK----------------PKDVWAVRLSI 104 (121)
Q Consensus 48 ~~~~IG~~Vrli~~ppYLKTAdpMPMLRPp~dLV~~gE~G~Iv~rr----------------P~d~waVRF~r 104 (121)
..|+|||+|++.+..|- -=-|=| . ..-|-.|+|+..+ |.-.+.|||..
T Consensus 117 ~~F~vGd~Vrv~~~~~~-------gHtRlP-~-Y~rg~~G~I~~~~g~~v~Pd~~A~g~ge~p~~lY~V~F~~ 180 (206)
T 4fm4_B 117 GGFKLGQRVHVKNEFVP-------GHTRFP-A-YIRGKAGVVVGISPAYPYPDAAAHGEYGFSEPTYDVCFKS 180 (206)
T ss_dssp TCCCTTCEEEECCCCCS-------SCCSSC-G-GGTTCEEEEEEECCCEECHHHHTTTCCSCEECEEEEEEEH
T ss_pred CCCcCCCEEEeCCCCCC-------Cccccc-H-hhcCCeeEEEEEecCcCCcccccCCCCCCcceeEEEEEec
Confidence 46999999999876542 333443 2 4457899999773 44567888863
No 45
>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}
Probab=49.76 E-value=38 Score=20.00 Aligned_cols=36 Identities=31% Similarity=0.500 Sum_probs=23.2
Q ss_pred CCeeeEeeec-CCCEEEEEE--cceeEEeeCCccccCCC
Q 033358 84 GDVGRIISRK-PKDVWAVRL--SIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 84 gE~G~Iv~rr-P~d~waVRF--~rGtFLid~~yl~~~~~ 119 (121)
||+=.|+... ..|-|-++. ..-.=++++.|++.++.
T Consensus 28 Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~ 66 (71)
T 2jt4_A 28 GDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIEPVRD 66 (71)
T ss_dssp TCEEEEEESSSCSSEEEEEETTTCCEEEEEGGGEEETTT
T ss_pred CCEEEEEECCCCCCCEEEEECCCCCeEEechHHeEECCC
Confidence 3443444433 567888888 44456789999998764
No 46
>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=49.46 E-value=35 Score=20.90 Aligned_cols=38 Identities=13% Similarity=0.222 Sum_probs=25.8
Q ss_pred CCCCeeeEeeecC----CCEEEEEEcceeEEeeCCccccCCC
Q 033358 82 KPGDVGRIISRKP----KDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 82 ~~gE~G~Iv~rrP----~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
+.||+=.|+.... .|-|.+|...-.=++++.|+++++.
T Consensus 33 ~~Gd~i~vl~~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~ 74 (79)
T 1uhc_A 33 SANQKLKILEFKDVTGNTEWWLAEVNGKKGYVPSNYIRKTES 74 (79)
T ss_dssp CTTCEEEEEESCCTTSCTTEEEEESSSCEEEEEGGGEEECCS
T ss_pred CCCCEEEEEECCCCCCCCCeEEEEeCCCEEEEchHHeEECCC
Confidence 3455555555544 6788888654456889999998763
No 47
>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.96 E-value=43 Score=20.10 Aligned_cols=60 Identities=22% Similarity=0.265 Sum_probs=38.5
Q ss_pred CCcEEEEecCCceecCCccccccCCCCc-cCCCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCCC
Q 033358 53 GSPVIVIEAPKMIKTAASVPCLRANSGL-VKPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLELD 120 (121)
Q Consensus 53 G~~Vrli~~ppYLKTAdpMPMLRPp~dL-V~~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~~ 120 (121)
+.++..++.-.|-...+. +| ++.||+=.|+.....|.|.++...-.=++++.|++.++..
T Consensus 7 ~~~~~~~al~dy~~~~~~--------eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~ 67 (72)
T 2dl8_A 7 GEPIEAIAKFDYVGRTAR--------ELSFKKGASLLLYQRASDDWWEGRHNGIDGLIPHQYIVVQDTS 67 (72)
T ss_dssp CSCEEEEESSCBCCSSSS--------BCCBCTTCEEEEEEEEETTEEEEEETTEEEEECSSSEEECCSS
T ss_pred CCCEEEEECccCCcCCCC--------EeccCCCCEEEEEeecCCCEEEEEECCEEEEEchHHeEEcCCC
Confidence 344566666666543221 11 2445655666666778999998655568899999987643
No 48
>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A
Probab=47.82 E-value=20 Score=20.70 Aligned_cols=37 Identities=19% Similarity=0.343 Sum_probs=23.7
Q ss_pred CCCeeeEeeecCCCEEEEEEcce-eEEeeCCccccCCCC
Q 033358 83 PGDVGRIISRKPKDVWAVRLSIG-TYLLEGKYFKPLELD 120 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVRF~rG-tFLid~~yl~~~~~~ 120 (121)
.||+=.|+.. ..|-|.+|-..| .=++++.|++.++..
T Consensus 22 ~Gd~i~v~~~-~~~Ww~~~~~~g~~G~~P~~yv~~~~~~ 59 (60)
T 1i07_A 22 KDDVLEILDD-RRQWWKVRNASGDSGFVPNNILDIMRTP 59 (60)
T ss_dssp TTCEEEECGG-GCCEEEEECTTSCEEEEEGGGEEEECCC
T ss_pred CCCEEEEEEc-CCCeEEEEECCCCEEEEEHHHeEEccCC
Confidence 3444444444 567888874334 357899999887654
No 49
>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1
Probab=47.60 E-value=40 Score=19.60 Aligned_cols=33 Identities=15% Similarity=0.343 Sum_probs=23.4
Q ss_pred CCeeeEeeecCCCEEEEEEcceeEEeeCCcccc
Q 033358 84 GDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKP 116 (121)
Q Consensus 84 gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~ 116 (121)
||+=.|+.....|.|.++...+.=++++.|+++
T Consensus 27 Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~ 59 (62)
T 1uj0_A 27 GELITVLDDSDANWWQGENHRGTGLFPSNFVTT 59 (62)
T ss_dssp TCEEEEEECCSSSEEEEEETTEEEEEEGGGEES
T ss_pred CCEEEEEEeCCCCEEEEEECCCEEEechhHEEE
Confidence 444444444456788888887777889999875
No 50
>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=47.09 E-value=39 Score=19.57 Aligned_cols=36 Identities=8% Similarity=0.063 Sum_probs=22.8
Q ss_pred CCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCC
Q 033358 83 PGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLE 118 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~ 118 (121)
.||+=.|+.....|.|.++...-.=++++.|++.+.
T Consensus 26 ~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 61 (62)
T 1k4u_S 26 EGDIILVLSKVNEEWLEGESKGKVGIFPKVFVEDSA 61 (62)
T ss_dssp SSCEEEEEEESSSSCEEEECSSCEEEECGGGCCCSC
T ss_pred CCCEEEEEEeCCCCEEEEEECCcEEEEeHHHEEECC
Confidence 344444555555677888754334577889988764
No 51
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=47.05 E-value=5.5 Score=27.61 Aligned_cols=48 Identities=17% Similarity=0.126 Sum_probs=30.5
Q ss_pred eecCC-ccccccCCCCccCCCCeeeEe-eecCCCEEEEEEcceeEEeeCC
Q 033358 65 IKTAA-SVPCLRANSGLVKPGDVGRII-SRKPKDVWAVRLSIGTYLLEGK 112 (121)
Q Consensus 65 LKTAd-pMPMLRPp~dLV~~gE~G~Iv-~rrP~d~waVRF~rGtFLid~~ 112 (121)
+||.. -.-+.||+.++|.+||.=.|. .+.|.++-.-...+-.|||.+-
T Consensus 45 VKTT~p~~y~VrP~~Gii~P~~s~~v~V~~q~~~~~~~~~~kDKf~Vq~~ 94 (126)
T 1msp_A 45 IKTTNMRRLSVDPPCGVLDPKEKVLMAVSCDTFNAATEDLNNDRITIEWT 94 (126)
T ss_dssp EEESCTTTEEEESCEEEECTTCEEEEEEEECCCCGGGSCCSSCEEEEEEE
T ss_pred EEcCCCCcEEEECCCeEECCCCEEEEEEEecCCCCCCCccCCCEEEEEEE
Confidence 57655 478999999999999876554 4555432211233566666543
No 52
>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.61 E-value=43 Score=19.80 Aligned_cols=37 Identities=19% Similarity=0.223 Sum_probs=25.5
Q ss_pred CCCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCC
Q 033358 82 KPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLE 118 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~ 118 (121)
+.||+=.|+.....+.|.++...-.=++++.|++.++
T Consensus 27 ~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 63 (68)
T 1x2k_A 27 EEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQS 63 (68)
T ss_dssp CSSCEEEEEECSCSSEEEEESSSCEEEEETTTEEECC
T ss_pred CCCCEEEEEEcCCCCEEEEEECCcEEEEehHHeEEcC
Confidence 3445545555556688888875556688999998874
No 53
>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}
Probab=46.53 E-value=28 Score=20.53 Aligned_cols=37 Identities=24% Similarity=0.517 Sum_probs=23.6
Q ss_pred CCCCeeeEeeecCCCEEEEE-EcceeEEeeCCccccCC
Q 033358 82 KPGDVGRIISRKPKDVWAVR-LSIGTYLLEGKYFKPLE 118 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVR-F~rGtFLid~~yl~~~~ 118 (121)
+.||+=+|+.....|-|.++ ...-.=++++.|+++++
T Consensus 30 ~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~ 67 (68)
T 1s1n_A 30 KKGEILLVIEKKPDGWWIAKDAKGNEGLVPRTYLEPYS 67 (68)
T ss_dssp CSSEEEEECSCCSSSEEEEECSSSCEEEEESTTEEECC
T ss_pred CCCCEEEEEEcCCCCeEEEEECCCCEEEEehHHeEECc
Confidence 34444455555556788888 43334578999998875
No 54
>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.00 E-value=50 Score=20.26 Aligned_cols=37 Identities=16% Similarity=0.257 Sum_probs=24.9
Q ss_pred CCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 83 PGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
.||+=.|+.....|.|.++...-.=+++..|++.+..
T Consensus 31 ~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~ 67 (81)
T 2ysq_A 31 AGDVIKVLDASNKDWWWGQIDDEEGWFPASFVRLWVN 67 (81)
T ss_dssp TTCEEEEEECCSSSEEEEECSSCEEEEEGGGEEESSC
T ss_pred CCCEEEEEEEcCcCEEEEEECCCEEEechHHEEEcCC
Confidence 3444455555557788888764456789999988753
No 55
>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.36 E-value=37 Score=20.71 Aligned_cols=37 Identities=22% Similarity=0.251 Sum_probs=23.2
Q ss_pred CCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 83 PGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
.||+=.|+.....|.|.++...-.=+++..|++.++.
T Consensus 28 ~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~ 64 (79)
T 2yun_A 28 KGDIVIIHEKKEEGWWFGSLNGKKGHFPAAYVEELPS 64 (79)
T ss_dssp TTCEEEEEECCSSSCEEEESSSCEEEECSTTEEEESS
T ss_pred CCCEEEEEEcCCCCEEEEEECCCEEEEEhHHeEECCC
Confidence 3444444444456778888544445778888887653
No 56
>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A
Probab=45.00 E-value=43 Score=20.07 Aligned_cols=35 Identities=14% Similarity=0.147 Sum_probs=23.5
Q ss_pred CCeeeEeeecCCCEEEEEEcceeEEeeCCccccCC
Q 033358 84 GDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLE 118 (121)
Q Consensus 84 gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~ 118 (121)
||+=.|+.....+.|.++...-.=++++.|++.++
T Consensus 29 Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 63 (73)
T 2dbm_A 29 GDIITLTNQIDENWYEGMLHGHSGFFPINYVEILV 63 (73)
T ss_dssp TCEEECCBCSSSSEEEEEETTEEEEEESSSEEESS
T ss_pred CCEEEEEEecCCCEEEEEECCCEEEechHHEEEcc
Confidence 33333334445688888886556688999999774
No 57
>2zzd_A Thiocyanate hydrolase subunit alpha; scnase, cobalt, metalloprotein, sulfenic acid, sulfinic acid, nitrIle hydratase, carbonyl sulfide; HET: FRU TLA BGC; 1.78A {Thiobacillus thioparus} PDB: 2dd4_A 2dxb_A 2dd5_A* 2dxc_A*
Probab=44.83 E-value=9.4 Score=28.00 Aligned_cols=39 Identities=23% Similarity=0.405 Sum_probs=26.7
Q ss_pred ccccccccCCcEEEEecCCceecCCccccccCCCCccCCCCeeeEeee
Q 033358 45 IRRSKLAIGSPVIVIEAPKMIKTAASVPCLRANSGLVKPGDVGRIISR 92 (121)
Q Consensus 45 ~~~~~~~IG~~Vrli~~ppYLKTAdpMPMLRPp~dLV~~gE~G~Iv~r 92 (121)
.....|++||+|++...+|--=|--|. .--|-.|+|...
T Consensus 32 ~~~prF~vGDrVrvr~~~p~gHtRlP~---------YvRGk~G~I~~~ 70 (126)
T 2zzd_A 32 AGKSKFNVGDRVRIKDLPDLFYTRTMT---------YTRGATGTIVRL 70 (126)
T ss_dssp TCSCSSCTTCEEEECCCCCSSCCSSCG---------GGTTCEEEEEEE
T ss_pred CCCCccCCCCEEEEccCCCCCceeccH---------HhCCCEEEEEEE
Confidence 445789999999999888754443332 234677887654
No 58
>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A
Probab=44.66 E-value=40 Score=19.13 Aligned_cols=34 Identities=18% Similarity=0.299 Sum_probs=18.5
Q ss_pred CCeeeEeeecCCCEEEEE-EcceeEEeeCCccccC
Q 033358 84 GDVGRIISRKPKDVWAVR-LSIGTYLLEGKYFKPL 117 (121)
Q Consensus 84 gE~G~Iv~rrP~d~waVR-F~rGtFLid~~yl~~~ 117 (121)
||+=.|+.....|-|.++ ...-.=++++.|++++
T Consensus 23 Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~ 57 (57)
T 1cka_A 23 GDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKY 57 (57)
T ss_dssp TCEEEEEECSSSSEEEEECTTSCEEEEEGGGEEC-
T ss_pred CCEEEEEEecCCCcEEEEeCCCCEEEEeHHHEEEC
Confidence 344344444456677777 3322346788887753
No 59
>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}
Probab=44.56 E-value=53 Score=20.20 Aligned_cols=32 Identities=9% Similarity=-0.073 Sum_probs=20.8
Q ss_pred eEeeecCCC-EEEEEEcceeEEeeCCccccCCC
Q 033358 88 RIISRKPKD-VWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 88 ~Iv~rrP~d-~waVRF~rGtFLid~~yl~~~~~ 119 (121)
.|+.....+ .|..+...-.=++.+.|++.++.
T Consensus 36 ~v~~~~~~~gWw~g~~~g~~G~fP~~yv~~~~~ 68 (80)
T 2i0n_A 36 TITFKDQENKWFMGQLNGKEGSFPVDHVEILLS 68 (80)
T ss_dssp EEEEESSSSSEEEEEETTEEEEEEGGGEEEESS
T ss_pred EEEEecCCCCEEEEEECCcEEEechHHEEECCC
Confidence 333333344 88888765566789999987653
No 60
>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A
Probab=43.92 E-value=46 Score=19.30 Aligned_cols=36 Identities=11% Similarity=0.205 Sum_probs=23.6
Q ss_pred CCeeeEeee-cCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 84 GDVGRIISR-KPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 84 gE~G~Iv~r-rP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
||+=.|+.. ...|.|..+...-.=++++.|++.++.
T Consensus 23 Gd~i~v~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~ 59 (62)
T 2j6f_A 23 GEIIRNVKKLQEEGWLEGELNGRRGMFPDNFVKEIKR 59 (62)
T ss_dssp TCEEEEEEECSSTTEEEEEETTEEEEEEGGGEEECC-
T ss_pred CCEEEEEEecCCCCEEEEEECCcEEEechHHEEECCC
Confidence 444444444 456788888755556789999998753
No 61
>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1
Probab=42.94 E-value=63 Score=20.54 Aligned_cols=37 Identities=24% Similarity=0.435 Sum_probs=24.9
Q ss_pred CCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 83 PGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
.||+=.|+.....|-|.++...-.=++++.|++.++.
T Consensus 38 ~Gd~i~Vl~~~~~gWw~g~~~g~~G~~P~~yv~~~~~ 74 (83)
T 1neg_A 38 KGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLAA 74 (83)
T ss_dssp TTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEECCT
T ss_pred CCCEEEEEEecCCCEEEEEECCeEEEEEHHHEEECCC
Confidence 3444444444456788887766667889999998753
No 62
>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.89 E-value=42 Score=20.18 Aligned_cols=24 Identities=8% Similarity=0.100 Sum_probs=18.6
Q ss_pred CEEEEEEcceeEEeeCCccccCCC
Q 033358 96 DVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 96 d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
|.|.+|...-.=+++..|++.++.
T Consensus 43 ~Ww~g~~~g~~G~~P~~yv~~~~~ 66 (73)
T 2dm1_A 43 GWWKGETNGRIGWFPSTYVEEEGI 66 (73)
T ss_dssp SCEEEEETTEEEEECSSSEEECCC
T ss_pred CeEEEEECCeEEEeehHHEEEcCC
Confidence 788888765556889999998764
No 63
>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1
Probab=42.58 E-value=51 Score=19.41 Aligned_cols=36 Identities=14% Similarity=0.160 Sum_probs=23.7
Q ss_pred CCCCeeeEeeecCCCEEEEEE-cceeEEeeCCccccC
Q 033358 82 KPGDVGRIISRKPKDVWAVRL-SIGTYLLEGKYFKPL 117 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF-~rGtFLid~~yl~~~ 117 (121)
+.||+=.|+.....|-|.+|- ..-.=++++.|++++
T Consensus 22 ~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~ 58 (67)
T 1gl5_A 22 ERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTGK 58 (67)
T ss_dssp CTTCEEEEEECSSSSEEEEECSSSCEEEEETTSEESS
T ss_pred CcCCEEEEEEccCCCcEEEEECCCCEEEEEhHhEEEc
Confidence 345555555555567888883 333457899999887
No 64
>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=42.53 E-value=54 Score=20.74 Aligned_cols=27 Identities=4% Similarity=-0.112 Sum_probs=19.4
Q ss_pred CCCEEEEEEcceeEEeeCCccccCCCC
Q 033358 94 PKDVWAVRLSIGTYLLEGKYFKPLELD 120 (121)
Q Consensus 94 P~d~waVRF~rGtFLid~~yl~~~~~~ 120 (121)
..|.|.++...-.=++...|++.++..
T Consensus 39 ~~gWw~g~~~g~~G~~P~~yv~~~~~~ 65 (93)
T 1uff_A 39 EPGWLYGSFQGNFGWFPCNYVEKMPSS 65 (93)
T ss_dssp SSSEEEEEETTEEEEEETTTEEECCSS
T ss_pred CCCEEEEEECCCEEEechHHeEEcCCc
Confidence 457788886655557899999887643
No 65
>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=41.97 E-value=37 Score=20.55 Aligned_cols=29 Identities=14% Similarity=0.220 Sum_probs=20.6
Q ss_pred eeecCCCEEEEEEcceeEEeeCCccccCC
Q 033358 90 ISRKPKDVWAVRLSIGTYLLEGKYFKPLE 118 (121)
Q Consensus 90 v~rrP~d~waVRF~rGtFLid~~yl~~~~ 118 (121)
+.....+.|.++...-.=+++..|++.++
T Consensus 38 ~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 66 (76)
T 1ujy_A 38 TRVEEGGWWEGTLNGRTGWFPSNYVREIK 66 (76)
T ss_dssp SSCCSSSCEEEEETTEEEEECTTTSEECC
T ss_pred EEecCCCEEEEEECCCEEEechHHEEECC
Confidence 33334678888876556688999998775
No 66
>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=41.92 E-value=34 Score=21.26 Aligned_cols=34 Identities=12% Similarity=0.338 Sum_probs=22.9
Q ss_pred CCCeeeEeeecCCCEEEEEEcceeEEeeCCcccc
Q 033358 83 PGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKP 116 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~ 116 (121)
.||+=.|+.....|-|.++...+.=++++.|+++
T Consensus 38 ~Gd~i~Vl~~~~~gWw~g~~~g~~G~fP~~yV~~ 71 (72)
T 2l0a_A 38 AGEIITVLDDSDPNWWKGETHQGIGLFPSNFVTA 71 (72)
T ss_dssp TTCEEEEEEEEETTEEEEECSSCEEECTTCCEEE
T ss_pred CCCEEEEEEecCCCEEEEEECCCEEEechhhCcc
Confidence 3444455555556788888777777788888764
No 67
>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A
Probab=41.80 E-value=44 Score=19.63 Aligned_cols=35 Identities=9% Similarity=0.170 Sum_probs=22.8
Q ss_pred CCeeeEeeecCCCEEEEEEcc--eeEEeeCCccccCC
Q 033358 84 GDVGRIISRKPKDVWAVRLSI--GTYLLEGKYFKPLE 118 (121)
Q Consensus 84 gE~G~Iv~rrP~d~waVRF~r--GtFLid~~yl~~~~ 118 (121)
||+=.|+.....|-|..+... -.=++++.|++.++
T Consensus 28 Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~ 64 (67)
T 2o9s_A 28 GERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVIK 64 (67)
T ss_dssp TCEEEEEEECSSSEEEEECTTSSCEEEEEGGGEEEEE
T ss_pred CCEEEEEEecCCCEEEEEECCCCCEEEEChHHeEECC
Confidence 444444444456788888876 45678899988764
No 68
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=41.77 E-value=13 Score=26.21 Aligned_cols=42 Identities=14% Similarity=0.187 Sum_probs=30.2
Q ss_pred eecCCc-cccccCCCCccCCCCeeeEe-eecCCCEEEEEEcceeEEeeC
Q 033358 65 IKTAAS-VPCLRANSGLVKPGDVGRII-SRKPKDVWAVRLSIGTYLLEG 111 (121)
Q Consensus 65 LKTAdp-MPMLRPp~dLV~~gE~G~Iv-~rrP~d~waVRF~rGtFLid~ 111 (121)
+||.+| +-+.||+.++|.+|+.=.|. -++|+. -.+-.|||-.
T Consensus 43 VKtT~p~~YrVrP~~G~I~Pg~~~~I~I~~q~~~-----~k~DKflVq~ 86 (116)
T 1m1s_A 43 VKSSNNEHYRVRPVYGFVDAKGKSKLDINRLPGP-----PKEDKIVIQY 86 (116)
T ss_dssp EEESCTTTEEEECSEEEECTTCEEEEEEEECSCC-----SCEEEEEEEE
T ss_pred EEecCCCceEEcCCceEECCCCeEEEEEEeCCCC-----CCCCEEEEEE
Confidence 488776 89999999999999876554 566652 2356677644
No 69
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=41.44 E-value=12 Score=25.72 Aligned_cols=42 Identities=14% Similarity=0.199 Sum_probs=30.5
Q ss_pred eecCCc-cccccCCCCccCCCCeeeEe-eecCCCEEEEEEcceeEEeeC
Q 033358 65 IKTAAS-VPCLRANSGLVKPGDVGRII-SRKPKDVWAVRLSIGTYLLEG 111 (121)
Q Consensus 65 LKTAdp-MPMLRPp~dLV~~gE~G~Iv-~rrP~d~waVRF~rGtFLid~ 111 (121)
+||.+| +.+.||+.++|.+|+.=.|. -++|+.- .+-.|||-+
T Consensus 35 VKtT~p~~y~VrP~~G~I~P~~~~~i~I~~q~~~~-----~~dKflvq~ 78 (109)
T 1row_A 35 IKSSNNNEYRIAPVFGFVDPSGSKDVVITRTAGAP-----KEDKLVVHF 78 (109)
T ss_dssp EEESCSSSEEEECSEEEECTTEEEEEEEEECSCCC-----EEEEEEEEE
T ss_pred EEeCCCCceEEcCCceEECCCCeEEEEEEeCCCCC-----CCCEEEEEE
Confidence 477775 89999999999999876654 6666532 356676643
No 70
>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.20 E-value=55 Score=19.39 Aligned_cols=38 Identities=16% Similarity=0.273 Sum_probs=26.1
Q ss_pred CCCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 82 KPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
+.||+=.|+.....|-|..+...-.=++++.|+++++.
T Consensus 27 ~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~ 64 (68)
T 2dmo_A 27 MPGNIVFVLKKGNDNWATVMFNGQKGLVPCNYLEPVSG 64 (68)
T ss_dssp CTTCEEEECEECSSSCEEEEETTEEEEECSTTEEECCC
T ss_pred CCCCEEEEEEeCCCCEEEEEeCCCEEEeehHHeEECCC
Confidence 34555555555556788887765566889999998764
No 71
>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A
Probab=41.17 E-value=51 Score=18.99 Aligned_cols=36 Identities=31% Similarity=0.252 Sum_probs=24.0
Q ss_pred CCCCeeeEeeecCCCEEEEEEcceeEEeeCCccccC
Q 033358 82 KPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPL 117 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~ 117 (121)
+.||+=.|+.....|-|..+...-.=++++.|++.+
T Consensus 24 ~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~l 59 (60)
T 1w70_A 24 KAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVKIL 59 (60)
T ss_dssp CTTCEEEEEEECSSSEEEEEETTEEEEEEGGGEEEC
T ss_pred CCCCEEEEEEeCCCCeEEEEECCCEEEechHHEEEC
Confidence 344554555555677888887655567788888875
No 72
>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}
Probab=41.10 E-value=48 Score=18.73 Aligned_cols=36 Identities=14% Similarity=0.127 Sum_probs=23.4
Q ss_pred CCCeeeEeeecCCCEEEEEEcc--eeEEeeCCccccCC
Q 033358 83 PGDVGRIISRKPKDVWAVRLSI--GTYLLEGKYFKPLE 118 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVRF~r--GtFLid~~yl~~~~ 118 (121)
.||+=.|+.....|-|.++-.+ -.=++++.|++++.
T Consensus 22 ~Gd~i~v~~~~~~gW~~g~~~~~g~~G~~P~~yv~~~~ 59 (59)
T 1yn8_A 22 EGDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSYIQ 59 (59)
T ss_dssp TTCEEEEEEEEETTEEEEECTTSSCEEEEEGGGEEECC
T ss_pred CCCEEEEEEcCCCCeEEEEECCCCCEEEEehHHeEECC
Confidence 3444445555556788888764 24577899988763
No 73
>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=41.00 E-value=50 Score=20.10 Aligned_cols=39 Identities=13% Similarity=0.244 Sum_probs=28.0
Q ss_pred cCCCCeeeEeeecCCCEEEEEEcc----eeEEeeCCccccCCC
Q 033358 81 VKPGDVGRIISRKPKDVWAVRLSI----GTYLLEGKYFKPLEL 119 (121)
Q Consensus 81 V~~gE~G~Iv~rrP~d~waVRF~r----GtFLid~~yl~~~~~ 119 (121)
++.||+=.|+.....|-|-++... -.=++++.|+++++.
T Consensus 28 ~~~Gd~i~vl~~~~~gWw~g~~~~~~~g~~G~~P~~yv~~~~~ 70 (75)
T 2egc_A 28 FQEGVSMEVLERNPNGWWYCQILDGVKPFKGWVPSNYLEKKNS 70 (75)
T ss_dssp BCTTCEEEECEECTTSEEEEEECCSSSCEEEEEEGGGEEECCS
T ss_pred CCCCCEEEEEEcCCCCeEEEEeCCCCCCcEEEEehHHCEECCC
Confidence 345666667777778899999852 235789999998763
No 74
>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.95 E-value=66 Score=20.20 Aligned_cols=57 Identities=7% Similarity=0.019 Sum_probs=38.1
Q ss_pred cEEEEecCCceecCCccccccCCCCc-cCCCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 55 PVIVIEAPKMIKTAASVPCLRANSGL-VKPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 55 ~Vrli~~ppYLKTAdpMPMLRPp~dL-V~~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
.++.++.-.|--+.+- +| ++.||+=+|+.....+-|.++...-.=+++..|++.+..
T Consensus 17 ~~~~~al~dy~~~~~~--------eLs~~~Gd~i~v~~~~~~gWw~g~~~g~~G~~P~~yv~~~~~ 74 (88)
T 2cub_A 17 NMPAYVKFNYMAERED--------ELSLIKGTKVIVMEKCSDGWWRGSYNGQVGWFPSNYVTEEGD 74 (88)
T ss_dssp CEEEEESSCCCCCSTT--------BCCCCTTEEEEEEEECTTSEEEEEETTEEEEEEGGGEEECCC
T ss_pred CCEEEEccccCCCCCC--------CcCCCCCCEEEEEEccCCCeEEEEECCcEEEEehHHEEECCC
Confidence 3556666677543221 22 345666677777778899999865567889999998753
No 75
>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.20 E-value=56 Score=19.18 Aligned_cols=38 Identities=13% Similarity=0.150 Sum_probs=25.8
Q ss_pred CCCCeeeEeeecCCCEEEEEEc--ceeEEeeCCccccCCC
Q 033358 82 KPGDVGRIISRKPKDVWAVRLS--IGTYLLEGKYFKPLEL 119 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF~--rGtFLid~~yl~~~~~ 119 (121)
+.||+=.|+.....|.|.++.. .-.=++++.|+++++.
T Consensus 27 ~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~~P~~yv~~~~~ 66 (70)
T 2ct3_A 27 REGDRVDVMQQCDDGWFVGVSRRTQKFGTFPGNYVAPVSG 66 (70)
T ss_dssp CTTEEEEEEEECSSSCEEEEESSSCCEEEECTTTEEETTC
T ss_pred CCCCEEEEEEECCCCEEEEEECCCCCEEEechHHeEECCC
Confidence 3455555666666788888875 2345779999998753
No 76
>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.18 E-value=62 Score=19.72 Aligned_cols=38 Identities=16% Similarity=0.232 Sum_probs=26.0
Q ss_pred CCCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 82 KPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
+.||+=.|+.....|-|.++...-.=+++..|++.++.
T Consensus 37 ~~Gd~i~v~~~~~~gWw~g~~~g~~G~~P~~yv~~~~~ 74 (78)
T 2ed0_A 37 QEGAIIYVIKKNDDGWYEGVMNGVTGLFPGNYVESISG 74 (78)
T ss_dssp CSSCEEEEEEECSSSEEEEEETTEEEEEETTSEEECSS
T ss_pred cCCCEEEEEEeCCCCEEEEEECCcEEEeChHHEEEcCC
Confidence 34455555555567788888655556889999998753
No 77
>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A
Probab=39.49 E-value=58 Score=19.20 Aligned_cols=38 Identities=13% Similarity=0.151 Sum_probs=25.6
Q ss_pred CCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCCC
Q 033358 83 PGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLELD 120 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~~ 120 (121)
.||+=.|+.....|-|..+...-.=++++.|++.++..
T Consensus 24 ~Gd~i~v~~~~~~~Ww~g~~~g~~G~fP~~yv~~~~~~ 61 (67)
T 2bzy_A 24 VGDIVKVTRMNINGQWEGEVNGRKGLFPFTHVKIFDPQ 61 (67)
T ss_dssp TTCEEEEEEECSSSEEEEEETTEEEEEEGGGEEECCSC
T ss_pred CCCEEEEEEecCCCeEEEEeCCcEEEEehHHeEECCCc
Confidence 45555555555677787777555557799999887643
No 78
>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A
Probab=39.46 E-value=57 Score=19.09 Aligned_cols=36 Identities=14% Similarity=0.122 Sum_probs=22.9
Q ss_pred CCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 84 GDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 84 gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
||+=.|+.....+.|..+...-.=+++..|++.++.
T Consensus 29 Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~~~~ 64 (68)
T 2dl3_A 29 GDIVYIYKQIDQNWYEGEHHGRVGIFPRTYIELLSG 64 (68)
T ss_dssp TCEEEEEECCSTTEEEEECSSCEEEEETTTEEECCS
T ss_pred CCEEEEeEecCCCEEEEEECCCEEEEchHHEEECCC
Confidence 444444444456788888544445789999998753
No 79
>1ri9_A FYN-binding protein; SH3-like, helically extended, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=39.33 E-value=49 Score=23.41 Aligned_cols=39 Identities=23% Similarity=0.307 Sum_probs=32.8
Q ss_pred cCCCCeeeEeeecCCCEEEEEEcceeE-EeeCCccccCCC
Q 033358 81 VKPGDVGRIISRKPKDVWAVRLSIGTY-LLEGKYFKPLEL 119 (121)
Q Consensus 81 V~~gE~G~Iv~rrP~d~waVRF~rGtF-Lid~~yl~~~~~ 119 (121)
++.||.=.||..-..+-|-.|=+.|.| +++..||+++|.
T Consensus 60 fkkGE~LeVI~~~e~~wwLcRNs~GkyGyVP~~yl~~~d~ 99 (102)
T 1ri9_A 60 VKPGESLEVIQTTDDTKVLCRNEEGKYGYVLRSYLADNDG 99 (102)
T ss_dssp CCTTCBCEEEEESSSSEEEEEETTTEEEEEEGGGSCC---
T ss_pred cCCCCEEEEEEeCCCCEEEEECCCCCCCceeHHHhccccc
Confidence 677899999999999999999999999 889999988764
No 80
>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.52 E-value=76 Score=20.25 Aligned_cols=63 Identities=11% Similarity=0.129 Sum_probs=37.4
Q ss_pred EEEecCCceecC-CccccccCCCCc-cCCCCeeeEeee-cCCCEEEEEEcceeEEeeCCccccCCCC
Q 033358 57 IVIEAPKMIKTA-ASVPCLRANSGL-VKPGDVGRIISR-KPKDVWAVRLSIGTYLLEGKYFKPLELD 120 (121)
Q Consensus 57 rli~~ppYLKTA-dpMPMLRPp~dL-V~~gE~G~Iv~r-rP~d~waVRF~rGtFLid~~yl~~~~~~ 120 (121)
.+++.-.|-.+. +|.|.-.+. +| ++.||+=+|+.. ...|.|..|...-.=++++.|++.++..
T Consensus 19 ~~~Alydy~~~~~~~~~~~~~~-eLsf~~Gd~i~vl~~~~~~gWw~g~~~g~~G~~P~~yv~~~~~~ 84 (97)
T 2csq_A 19 IFVALFDYDPLTMSPNPDAAEE-ELPFKEGQIIKVYGDKDADGFYRGETCARLGLIPCNMVSEIQAD 84 (97)
T ss_dssp EEECSSCBCTTTTSSCHHHHTT-BCCBCTTCEEEEEEEECTTCEEEEEETTEEEEEETTTSEECCCC
T ss_pred EEEEccccCCCcccccCCCCCC-ccCCCCCCEEEEEEecCCCCeEEEEECCcEEEEehHHeEECCCC
Confidence 346666665532 222211221 22 355666666654 3456999998655668899999988643
No 81
>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A
Probab=38.48 E-value=53 Score=18.42 Aligned_cols=37 Identities=8% Similarity=0.053 Sum_probs=23.6
Q ss_pred CCCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCC
Q 033358 82 KPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLE 118 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~ 118 (121)
+.||.=.|+.....|-|..+...-.=++++.|++++.
T Consensus 21 ~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~~~ 57 (58)
T 4e6r_A 21 VXGSRVTVMEXCSDGWWRGSYNGQIGWFPSNYVLEEV 57 (58)
T ss_dssp CTTCEEEEEEECTTSEEEEEETTEEEEEEGGGEEECC
T ss_pred eCCCEEEEeEcCCCCEEEEEECCcEEEEehHHEEECC
Confidence 3455555555556677777665445577888888653
No 82
>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}
Probab=38.47 E-value=61 Score=19.17 Aligned_cols=38 Identities=8% Similarity=0.058 Sum_probs=25.1
Q ss_pred CCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCCC
Q 033358 83 PGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLELD 120 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~~ 120 (121)
.||+=.|+.....|-|..+...-.=++++.|++.++..
T Consensus 29 ~Gd~i~v~~~~~~gWw~g~~~g~~G~fP~~yv~~~~~~ 66 (67)
T 2eyx_A 29 VGELVKVTKINVSGQWEGECNGKRGHFPFTHVRLLDQQ 66 (67)
T ss_dssp SSEEEEEEEECTTSEEEEEETTEEEEEEGGGBCCBCSC
T ss_pred CCCEEEEEEecCCCEEEEEECCCEEEEehHhEEEcCCC
Confidence 34444455555667787777554557799999987654
No 83
>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.27 E-value=70 Score=19.99 Aligned_cols=37 Identities=14% Similarity=0.147 Sum_probs=24.4
Q ss_pred CCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 83 PGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
.||+=.|+.....|-|..+...-.=++++.|++.++.
T Consensus 39 ~Gd~i~v~~~~~~~Ww~g~~~g~~G~fP~~yv~~~~~ 75 (88)
T 2dbk_A 39 VGDIVKVTRMNINGQWEGEVNGRKGLFPFTHVKIFDP 75 (88)
T ss_dssp TTCEEEEEEECTTSCEEEECSSCEEEECTTTEEECCS
T ss_pred CCCEEEEEEecCCCEEEEEeCCCEEEEehHHeEECCC
Confidence 3455555555566778777654455778899888754
No 84
>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A
Probab=37.81 E-value=11 Score=22.71 Aligned_cols=36 Identities=6% Similarity=0.118 Sum_probs=23.9
Q ss_pred CCeeeEeeecCCCEEEEEEcceeE-EeeCCccccCCC
Q 033358 84 GDVGRIISRKPKDVWAVRLSIGTY-LLEGKYFKPLEL 119 (121)
Q Consensus 84 gE~G~Iv~rrP~d~waVRF~rGtF-Lid~~yl~~~~~ 119 (121)
||+=.|+.....|-|.++...+.= ++++.|++.++.
T Consensus 28 Gd~i~v~~~~~~~Ww~g~~~g~~gG~~P~~yv~~~~~ 64 (71)
T 1hsq_A 28 SAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEMVN 64 (71)
T ss_dssp TCCCBSCCCBTTTEECCBCSSSCSCCEETTTCCSCSC
T ss_pred CCEEEEEEecCCCEEEEEECCeEEeEEChHHcEECCC
Confidence 333334444456788888765554 889999998764
No 85
>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}
Probab=37.67 E-value=67 Score=19.34 Aligned_cols=37 Identities=11% Similarity=0.154 Sum_probs=24.8
Q ss_pred CCCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCC
Q 033358 82 KPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLE 118 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~ 118 (121)
+.||+=.|+.....|-|..+...-.=++++.|++.+.
T Consensus 23 ~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 59 (68)
T 2ew3_A 23 KEGDIITLTNQIDENWYEGMIHGESGFFPINYVEVIV 59 (68)
T ss_dssp CTTCEEEEEEESSSSEEEEEETTEEEEEEGGGEEESC
T ss_pred CCCCEEEEEEecCCCEEEEEECCcEEEeeHHHEEEcC
Confidence 3344445555556678888875555678999998765
No 86
>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A
Probab=37.40 E-value=58 Score=18.58 Aligned_cols=34 Identities=24% Similarity=0.451 Sum_probs=21.1
Q ss_pred CCeeeEeeec--CCCEEEEEEcceeEEeeCCccccC
Q 033358 84 GDVGRIISRK--PKDVWAVRLSIGTYLLEGKYFKPL 117 (121)
Q Consensus 84 gE~G~Iv~rr--P~d~waVRF~rGtFLid~~yl~~~ 117 (121)
||+=.|+... ..|-|.++...-.=++++.|++.+
T Consensus 25 Gd~i~v~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~l 60 (60)
T 1oot_A 25 GDVITILKKSDSQNDWWTGRVNGREGIFPANYVELV 60 (60)
T ss_dssp TCEEEEEECCSCTTSEEEEEETTEEEEEEGGGEEEC
T ss_pred CCEEEEEEeCCCCCCeEEEEECCEEEEEeHHHEEEC
Confidence 3333344433 467888887555567788888754
No 87
>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}
Probab=37.23 E-value=63 Score=18.96 Aligned_cols=36 Identities=8% Similarity=0.032 Sum_probs=23.7
Q ss_pred CCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 84 GDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 84 gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
||+=.|+.....+.|.++...-.=+++..|++.++.
T Consensus 29 Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~ 64 (68)
T 2djq_A 29 GDVILLRRQLDENWYQGEINGVSGIFPASSVEVISG 64 (68)
T ss_dssp TCEEEEEECCCSSEEEEEETTEEEEEESSSEETTCS
T ss_pred CCEEEEEEecCCCEEEEEECCcEEEeehHHEEEcCC
Confidence 444344444456788888654456789999998753
No 88
>1qd7_I S17 ribosomal protein; 30S ribosomal subunit, low resolution model, ribosome; 5.50A {Thermus thermophilus} SCOP: i.1.1.3 PDB: 1eg0_G 1rip_A
Probab=36.96 E-value=16 Score=25.03 Aligned_cols=19 Identities=21% Similarity=0.350 Sum_probs=17.1
Q ss_pred ccccCCcEEEEecCCceec
Q 033358 49 KLAIGSPVIVIEAPKMIKT 67 (121)
Q Consensus 49 ~~~IG~~Vrli~~ppYLKT 67 (121)
++.+||.|+|.+-.|.=||
T Consensus 49 ~~k~GD~V~I~E~RPlSKt 67 (89)
T 1qd7_I 49 EAKVGDIVKIMETRPLSAT 67 (89)
T ss_pred CCCCCCEEEEEEcccCCCC
Confidence 5789999999999998777
No 89
>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A
Probab=36.35 E-value=67 Score=18.95 Aligned_cols=27 Identities=19% Similarity=0.298 Sum_probs=18.4
Q ss_pred cCCCEEEEEEcce-eEEeeCCccccCCC
Q 033358 93 KPKDVWAVRLSIG-TYLLEGKYFKPLEL 119 (121)
Q Consensus 93 rP~d~waVRF~rG-tFLid~~yl~~~~~ 119 (121)
...|.|.+|-..| .=++++.|++.++.
T Consensus 39 ~~~~Ww~g~~~~g~~G~~P~~yv~~~~~ 66 (71)
T 1u5s_A 39 NDPEWWKCKNARGQVGLVPKNYVVVLSD 66 (71)
T ss_dssp TTTCEEEEEETTTEEEEEETTSEEECCC
T ss_pred CCCCCEEEEeCCCCEEEEeHHHEEECCC
Confidence 3567788873334 45789999998753
No 90
>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A
Probab=36.32 E-value=68 Score=19.36 Aligned_cols=36 Identities=11% Similarity=0.178 Sum_probs=22.8
Q ss_pred CCeeeEeeecCCCEEEEEEcc---eeEEeeCCccccCCC
Q 033358 84 GDVGRIISRKPKDVWAVRLSI---GTYLLEGKYFKPLEL 119 (121)
Q Consensus 84 gE~G~Iv~rrP~d~waVRF~r---GtFLid~~yl~~~~~ 119 (121)
||+=.|+.....|-|..+... -.=++++.|++.++.
T Consensus 32 Gd~i~v~~~~~~~Ww~g~~~~~~g~~G~~P~~yv~~~~~ 70 (76)
T 2ed1_A 32 GEVIIVTGEEDQEWWIGHIEGQPERKGVFPVSFVHILSD 70 (76)
T ss_dssp SCEEEESSCCSSSEEEEEETTCTTCEEEEEGGGEEECCC
T ss_pred CCEEEEEEecCCCEEEEEECCCCCCEEEEehHHeEECCC
Confidence 333334443456788888754 344779999988753
No 91
>1jb0_E Photosystem 1 reaction centre subunit IV; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: b.34.4.2 PDB: 3pcq_E*
Probab=35.54 E-value=56 Score=22.31 Aligned_cols=40 Identities=28% Similarity=0.273 Sum_probs=28.9
Q ss_pred ccCCcEEEEecCCceecCCccccccCCCCccCCCCeeeEeeecCC-C---EEEEEEcceeE
Q 033358 51 AIGSPVIVIEAPKMIKTAASVPCLRANSGLVKPGDVGRIISRKPK-D---VWAVRLSIGTY 107 (121)
Q Consensus 51 ~IG~~Vrli~~ppYLKTAdpMPMLRPp~dLV~~gE~G~Iv~rrP~-d---~waVRF~rGtF 107 (121)
+-||+||| ||| .-.=-.|+|+|++..-. + -..|||.+=.|
T Consensus 2 ~RGskVrI---------------lR~--ESYWyn~vGtVasVD~s~gi~YPV~VRFdkVNY 45 (75)
T 1jb0_E 2 QRGSKVKI---------------LRP--ESYWYNEVGTVASVDQTPGVKYPVIVRFDKVNY 45 (75)
T ss_dssp CTTCEEEE---------------CCT--TCTTBTCEEEEEEECCCTTCSCCEEEECSSCCS
T ss_pred CCCCEEEE---------------ccc--cceeecCcceEEEEecCCCccccEEEEEeeecc
Confidence 45777776 566 34556799999998765 3 24899998665
No 92
>3qyh_B CO-type nitrIle hydratase beta subunit; cobalt, cysteine sulfinic acid, lyase; 2.00A {Pseudomonas putida} SCOP: b.34.4.0 PDB: 3qxe_B 3qz5_B 3qyg_B 3qz9_B
Probab=35.41 E-value=18 Score=28.18 Aligned_cols=39 Identities=23% Similarity=0.343 Sum_probs=26.0
Q ss_pred ccccccccCCcEEEEecCCceecCCccccccCCCCccCCCCeeeEeee
Q 033358 45 IRRSKLAIGSPVIVIEAPKMIKTAASVPCLRANSGLVKPGDVGRIISR 92 (121)
Q Consensus 45 ~~~~~~~IG~~Vrli~~ppYLKTAdpMPMLRPp~dLV~~gE~G~Iv~r 92 (121)
....+|++||+|++...+|---|--|. .--|-.|+|...
T Consensus 126 ~~~~~F~vGd~Vrv~~~~~~~HtR~P~---------Y~RG~~G~I~~~ 164 (219)
T 3qyh_B 126 GARARFAVGDKVRVLNKNPVGHTRMPR---------YTRGKVGTVVID 164 (219)
T ss_dssp CSCCCCCTTCEEEECCCCCSSCCCSCG---------GGTTCEEEEEEE
T ss_pred CCCCCCCCCCEEEECCCCCCCcccccH---------HHCCCeeEEEEE
Confidence 455789999999998877743333222 234677888654
No 93
>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=35.39 E-value=42 Score=20.03 Aligned_cols=35 Identities=14% Similarity=0.328 Sum_probs=22.9
Q ss_pred CCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 84 GDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 84 gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
||+=.|+.. -.|.|.+|...-.=++++.|+++++.
T Consensus 30 Gd~i~v~~~-~~~Ww~g~~~g~~G~~P~~yv~~~~~ 64 (69)
T 1uhf_A 30 GEEILVTQK-DGEWWTGSIGDRSGIFPSNYVKPKDS 64 (69)
T ss_dssp TCEEEECEE-ETTEEEECSTTCCEEECGGGCEECCC
T ss_pred CCEEEEEEe-CCCEEEEEeCCcEEEEchHHeEECCC
Confidence 444444444 46778887654445779999988764
No 94
>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}
Probab=35.36 E-value=63 Score=18.92 Aligned_cols=37 Identities=16% Similarity=0.168 Sum_probs=22.8
Q ss_pred CCCeeeEeeecCCCEEEEE--EcceeEEeeCCccccCCC
Q 033358 83 PGDVGRIISRKPKDVWAVR--LSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVR--F~rGtFLid~~yl~~~~~ 119 (121)
.||+=.|+.....+.|..+ ...-.=++++.|+++++.
T Consensus 28 ~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~ 66 (70)
T 2cuc_A 28 KGEGIRVLGKYQDGWLKGLSLLTGRTGIFPSDYVIPVSG 66 (70)
T ss_dssp TTCEEEEEEEEETTEEEEEETTTCCEEEEEGGGCEECCC
T ss_pred CCCEEEEEEecCCCeEEEEECCCCCEEEEchHHeEECcC
Confidence 3444444554456778777 333345778999988753
No 95
>3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange factor, autoinhibition, domain-swapped, cell junction, cell project endocytosis; 2.40A {Mus musculus} PDB: 3gf9_A
Probab=34.77 E-value=72 Score=23.14 Aligned_cols=38 Identities=18% Similarity=0.326 Sum_probs=27.8
Q ss_pred cCCCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCC
Q 033358 81 VKPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLE 118 (121)
Q Consensus 81 V~~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~ 118 (121)
+..||+=.|++...+|-|.++...-.=++++.|++.++
T Consensus 21 ~~~gd~i~v~~~~~~~w~~~~~~g~~G~~P~~~v~~~~ 58 (283)
T 3jv3_A 21 FSKGQIINVLNKEDPDWWKGEVSGQVGLFPSNYVKLTT 58 (283)
T ss_dssp BCTTCEEEEEECCSTTEEEEEETTEEEEEEGGGEEEGG
T ss_pred CCCCCEEEEEecCCCCEEEEEECCCCCcCCCccccccC
Confidence 34566667777777789999876555677999988764
No 96
>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.60 E-value=78 Score=19.22 Aligned_cols=38 Identities=24% Similarity=0.274 Sum_probs=25.7
Q ss_pred CCCCeeeEeeecC--CCEEEEEEcceeEEeeCCccccCCC
Q 033358 82 KPGDVGRIISRKP--KDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 82 ~~gE~G~Iv~rrP--~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
+.||+=.|+.... .|-|.++...-.=+++..|++.++.
T Consensus 37 ~~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~ 76 (80)
T 2d8h_A 37 QAGDRITVISKTDSHFDWWEGKLRGQTGIFPANYVTMNSG 76 (80)
T ss_dssp CTTCEEEEEECCSCSSSEEEEEETTEEEEEEGGGCCBCCC
T ss_pred cCCCEEEEeECcCCCCCeEEEEECCEEEEEchhHeEEcCC
Confidence 3344445555543 6788888865556889999998753
No 97
>1ugp_B NitrIle hydratase beta subunit; complex, N-butyric acid, non-corrin cobalt, hydration, lyase; HET: BUA; 1.63A {Pseudonocardia thermophila} SCOP: b.34.4.4 PDB: 1ire_B 1ugq_B 1ugr_B 1ugs_B
Probab=34.58 E-value=41 Score=26.29 Aligned_cols=40 Identities=18% Similarity=0.166 Sum_probs=27.1
Q ss_pred ccccccccCCcEEEEecCCceecCCccccccCCCCccCCCCeeeEeeec
Q 033358 45 IRRSKLAIGSPVIVIEAPKMIKTAASVPCLRANSGLVKPGDVGRIISRK 93 (121)
Q Consensus 45 ~~~~~~~IG~~Vrli~~ppYLKTAdpMPMLRPp~dLV~~gE~G~Iv~rr 93 (121)
.....|++||+|++...+|---|--|. .--|-.|+|+..+
T Consensus 134 ~~~~~F~vGd~Vrv~~~~~~~HtR~P~---------Y~Rgk~G~I~~~~ 173 (226)
T 1ugp_B 134 DRPPKFKEGDVVRFSTASPKGHARRAR---------YVRGKTGTVVKHH 173 (226)
T ss_dssp SSCCSCCTTCEEEECCCCCSSCCCCCG---------GGTTCEEEEEEEE
T ss_pred CCCCcCCCCCeEEEccCCCCCcccccH---------HhCCCeEEEEEEe
Confidence 446789999999999887743332222 3357788887543
No 98
>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=34.13 E-value=71 Score=18.89 Aligned_cols=35 Identities=29% Similarity=0.451 Sum_probs=22.5
Q ss_pred CCCeeeEeeecCCCEEEEEEc--ce-e---EEeeCCccccCC
Q 033358 83 PGDVGRIISRKPKDVWAVRLS--IG-T---YLLEGKYFKPLE 118 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVRF~--rG-t---FLid~~yl~~~~ 118 (121)
.||+=.| .....|-|-++.. .| . =++++.|+++++
T Consensus 31 ~Gd~i~v-~~~~~~Ww~g~~~~~~g~~~~~G~~P~~yv~~~~ 71 (72)
T 2kgt_A 31 AGDVFHV-ARKEEQWWWATLLDEAGGAVAQGYVPHNYLAERE 71 (72)
T ss_dssp TTCCEEE-EEECSSCEEEEEECTTSCEEEEEEECTTTSEEEC
T ss_pred CCCEEEE-eeCCCCEEEEEEcCCCCCEeCCcEEcHhHEEEcc
Confidence 3444344 3345678888884 34 3 588999998865
No 99
>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}
Probab=34.13 E-value=75 Score=18.91 Aligned_cols=36 Identities=19% Similarity=0.149 Sum_probs=21.6
Q ss_pred CCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 84 GDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 84 gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
||+=.|+.....|-|..+...-.=++++.|++.+..
T Consensus 23 Gd~i~v~~~~~~~Ww~g~~~g~~G~fP~~yv~~~~~ 58 (65)
T 2nwm_A 23 GDIVYIHKEVDKNWLEGEHHGRLGIFPANYVEVLPL 58 (65)
T ss_dssp TCEEEEEECCTTTCEEEEETTEEEEECGGGEEECCC
T ss_pred CCEEEEEEecCCCEEEEEECCcEEEEehhhEEEcCC
Confidence 333333333345677777554455778888887654
No 100
>2e6z_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.08 E-value=17 Score=22.41 Aligned_cols=37 Identities=22% Similarity=0.144 Sum_probs=27.3
Q ss_pred cccccccCCcEEEEecCCceecCCccccccCCCCccCCCCeeeEeeecCCCEEEEEE
Q 033358 46 RRSKLAIGSPVIVIEAPKMIKTAASVPCLRANSGLVKPGDVGRIISRKPKDVWAVRL 102 (121)
Q Consensus 46 ~~~~~~IG~~Vrli~~ppYLKTAdpMPMLRPp~dLV~~gE~G~Iv~rrP~d~waVRF 102 (121)
....|.+||.|++++-|= .|-.|+|..... +...|..
T Consensus 4 ~~~~f~~GD~V~V~~Gpf-------------------~g~~G~V~evd~-e~v~V~v 40 (59)
T 2e6z_A 4 GSSGFQPGDNVEVCEGEL-------------------INLQGKILSVDG-NKITIMP 40 (59)
T ss_dssp CCSSCCTTSEEEECSSTT-------------------TTCEEEECCCBT-TEEEEEE
T ss_pred ccccCCCCCEEEEeecCC-------------------CCCEEEEEEEeC-CEEEEEE
Confidence 345699999999987652 467888888886 4555655
No 101
>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}
Probab=34.04 E-value=67 Score=18.26 Aligned_cols=35 Identities=20% Similarity=0.248 Sum_probs=23.6
Q ss_pred CCCCeeeEeeecCCCEEEEEEcceeEEeeCCcccc
Q 033358 82 KPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKP 116 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~ 116 (121)
+.||+=.|+.....+-|.++...-.=++++.|+++
T Consensus 23 ~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~ 57 (58)
T 1zlm_A 23 EEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAE 57 (58)
T ss_dssp CTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEE
T ss_pred CCCCEEEEEEeCCCCEEEEEECCCEEEEehHHEEe
Confidence 34555555555566788888765566788888875
No 102
>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=33.27 E-value=42 Score=19.80 Aligned_cols=36 Identities=19% Similarity=0.322 Sum_probs=22.9
Q ss_pred CCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 84 GDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 84 gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
||+=.|+.....+.|.++...-.=++++.|++.++.
T Consensus 29 Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~ 64 (68)
T 1wi7_A 29 GDIIEVVGEVEEGWWEGVLNGKTGMFPSNFIKELSG 64 (68)
T ss_dssp TCEECCCEEEETTEEEECSTTCCEEEETTSEEECCS
T ss_pred CCEEEEEEcCCCCeEEEEECCcEEEEchHHEEECCC
Confidence 333333444457788888644445779999998764
No 103
>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding protein G; sortase, protein ligation, intein, inset, solubility enhancement; NMR {Mus musculus}
Probab=33.18 E-value=1.1e+02 Score=21.21 Aligned_cols=37 Identities=16% Similarity=0.252 Sum_probs=23.6
Q ss_pred CCCeeeEeeec-CCCEEEEEEcceeEEeeCCccccCCC
Q 033358 83 PGDVGRIISRK-PKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 83 ~gE~G~Iv~rr-P~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
.||+=.|+... ..|.|.++...-.=++++.|++.+..
T Consensus 26 ~Gd~i~Vl~~~~~~gWw~g~~~g~~G~fP~~yv~~~~~ 63 (142)
T 2kbt_A 26 EGDIIKILNKKGQQGWWRGEIYGRIGWFPSNYVEEDYS 63 (142)
T ss_dssp TTCEEEEEECCCSSSEEEEEETTEEEEEETTSEEESSC
T ss_pred CCCEEEEEEecCCCCeEEEEECCeeEEechHHEEEccc
Confidence 34444444442 56788888755556778899887653
No 104
>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A
Probab=33.05 E-value=69 Score=18.12 Aligned_cols=24 Identities=29% Similarity=0.595 Sum_probs=16.4
Q ss_pred CCCEEEEEE--cceeEEeeCCccccC
Q 033358 94 PKDVWAVRL--SIGTYLLEGKYFKPL 117 (121)
Q Consensus 94 P~d~waVRF--~rGtFLid~~yl~~~ 117 (121)
..|-|-++. ..-.=++++.|++++
T Consensus 35 ~~~Ww~g~~~~~g~~G~~P~~yv~~l 60 (60)
T 2v1q_A 35 SKDWWMCQLVDSGKSGLVPAQFIEPV 60 (60)
T ss_dssp CSSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred CCCCEEEEECCCCCEEEEEHHHEEEC
Confidence 456788887 334457788888764
No 105
>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D
Probab=32.90 E-value=62 Score=18.38 Aligned_cols=23 Identities=22% Similarity=0.288 Sum_probs=15.0
Q ss_pred CCEEEEEEcce-eEEeeCCccccC
Q 033358 95 KDVWAVRLSIG-TYLLEGKYFKPL 117 (121)
Q Consensus 95 ~d~waVRF~rG-tFLid~~yl~~~ 117 (121)
.|-|.++...| .=++++.|++++
T Consensus 37 ~~W~~g~~~~g~~G~~P~~yv~~l 60 (60)
T 2x3w_D 37 QGWCRGRLDSGQLGLYPANYVEAI 60 (60)
T ss_dssp SSEEEEECSSCCEEEEEGGGEEC-
T ss_pred CCceEEEeCCCCEEEecHHHEEEC
Confidence 36788887633 346788888754
No 106
>1v1c_A Obscurin; muscle, sarcomere, adapter, myogenesis, SH3-domain; NMR {Homo sapiens}
Probab=32.72 E-value=1.1e+02 Score=20.34 Aligned_cols=54 Identities=15% Similarity=0.191 Sum_probs=39.0
Q ss_pred cCCceecCCccccccCCCCc----cCCCCeeeEeeecCCCEEEEEEc------ceeEEeeCCccccC
Q 033358 61 APKMIKTAASVPCLRANSGL----VKPGDVGRIISRKPKDVWAVRLS------IGTYLLEGKYFKPL 117 (121)
Q Consensus 61 ~ppYLKTAdpMPMLRPp~dL----V~~gE~G~Iv~rrP~d~waVRF~------rGtFLid~~yl~~~ 117 (121)
.+-|.=+||-.|. . .+- ++-||+=+|++....+-|-||-. --.=-+++.||++.
T Consensus 5 ~~~Y~v~aDy~p~--~-~~~~ei~lk~Gd~VeVl~k~~~gwW~vr~~~~~~~~~~eGWVPa~yLe~~ 68 (71)
T 1v1c_A 5 FDIYVVTADYLPL--G-AEQDAITLREGQYVEVLDAAHPLRWLVRTKPTKSSPSRQGWVSPAYLDRR 68 (71)
T ss_dssp CCEEEESSCBCCC--S-CCTTBCCBCTTCEEEEEEEEETTEEEEEECCCTTCCCCEEEECGGGEEEE
T ss_pred eeEEEEEeccccc--C-CCcceeeecCCCEEEEEEcCCCCEEEEEecCCCCCCCccceecHHHhhhh
Confidence 3557778887665 2 132 77899999999999999999987 22334677777763
No 107
>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A
Probab=31.94 E-value=71 Score=17.93 Aligned_cols=35 Identities=29% Similarity=0.288 Sum_probs=21.8
Q ss_pred CCCCeeeEeeecCCCEEEEEEc--ceeEEeeCCcccc
Q 033358 82 KPGDVGRIISRKPKDVWAVRLS--IGTYLLEGKYFKP 116 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF~--rGtFLid~~yl~~ 116 (121)
+.||+=.|+.....|-|-++.. .-.=++++.|+++
T Consensus 21 ~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~~P~~yv~~ 57 (58)
T 1zuy_A 21 KKGDVIYITREEPSGWSLGKLLDGSKEGWVPTAYMKP 57 (58)
T ss_dssp CTTCEEEEEEECTTSEEEEEESSCSCEEEEEGGGEEC
T ss_pred CCCCEEEEEEecCCCeEEEEECCCCCEEEecHHHEEE
Confidence 3445555555556678888877 3344667887764
No 108
>3hht_B NitrIle hydratase beta subunit; alpha and beta proteins (A+B), lyase; 1.16A {Geobacillus pallidus} SCOP: b.34.4.4 PDB: 2dpp_B 1v29_B
Probab=31.80 E-value=18 Score=28.48 Aligned_cols=39 Identities=10% Similarity=0.020 Sum_probs=25.7
Q ss_pred ccccccccCCcEEEEecCCceecCCccccccCCCCccCCCCeeeEeee
Q 033358 45 IRRSKLAIGSPVIVIEAPKMIKTAASVPCLRANSGLVKPGDVGRIISR 92 (121)
Q Consensus 45 ~~~~~~~IG~~Vrli~~ppYLKTAdpMPMLRPp~dLV~~gE~G~Iv~r 92 (121)
....+|++||+|++.+.+|---|--|. .--|-.|+|...
T Consensus 137 ~~~~~F~vGd~Vrv~~~~~~~HtR~P~---------Y~RG~~G~I~~~ 175 (229)
T 3hht_B 137 SASPRFKVGERIKTKNIHPTGHTRFPR---------YARDKYGVIDEV 175 (229)
T ss_dssp SSCCSCCTTCEEEECCCCCSSCCSCCG---------GGTTCEEEEEEE
T ss_pred CCCCCCCCCCEEEECCCCCCCcccCcH---------HHCCCeeEEEEE
Confidence 445789999999998877733333222 234677887654
No 109
>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=31.71 E-value=86 Score=18.81 Aligned_cols=37 Identities=11% Similarity=0.034 Sum_probs=23.0
Q ss_pred CCCeeeEeeec-CCCEEEEE-EcceeEEeeCCccccCCC
Q 033358 83 PGDVGRIISRK-PKDVWAVR-LSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 83 ~gE~G~Iv~rr-P~d~waVR-F~rGtFLid~~yl~~~~~ 119 (121)
.||+=.|+... ..|-|.+| ...-.=+++..|++.++.
T Consensus 31 ~Gd~i~v~~~~~~~gW~~g~~~~g~~G~~P~~yv~~~~~ 69 (77)
T 2enm_A 31 EGEIITVTNPNVGGGWLEGKNNKGEQGLVPTDYVEILPN 69 (77)
T ss_dssp TTCEEEEEESCCSSSEEEEECTTCCEEEEETTTEEEECC
T ss_pred CCCEEEEeEccCCCCeEEEEECCCCEEEeehHHeEECCC
Confidence 34544555543 46778888 443345778999988753
No 110
>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.64 E-value=81 Score=18.50 Aligned_cols=26 Identities=15% Similarity=0.098 Sum_probs=17.8
Q ss_pred CCCEEEEEEcceeEEeeCCccccCCC
Q 033358 94 PKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 94 P~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
..|.|.+|...-.=++++.|++.++.
T Consensus 42 ~~~Ww~g~~~g~~G~~P~~yv~~~~~ 67 (71)
T 2cre_A 42 SEGWWKCLLHGRQGLAPANRLQILSG 67 (71)
T ss_dssp STTEEEEESSSCCEEEETTTEEECCC
T ss_pred CCCcEEEEECCCEEEEehHHEEECCC
Confidence 45677777543345779999988753
No 111
>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=31.53 E-value=57 Score=20.33 Aligned_cols=25 Identities=20% Similarity=0.364 Sum_probs=16.8
Q ss_pred CCCEEEEEEcce-eEEeeCCccccCC
Q 033358 94 PKDVWAVRLSIG-TYLLEGKYFKPLE 118 (121)
Q Consensus 94 P~d~waVRF~rG-tFLid~~yl~~~~ 118 (121)
-.|.|.+|-..| .=+++..|++.++
T Consensus 51 ~~~Ww~g~~~~g~~G~~P~~yv~~~~ 76 (91)
T 1wx6_A 51 DPEWWKCKNARGQVGLVPKNYVVVLS 76 (91)
T ss_dssp CTTEEEEECTTCCEEEEEGGGEEEEE
T ss_pred CCCcEEEEeCCCCEEEEchHHEEECC
Confidence 457788873333 4577889988764
No 112
>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens}
Probab=31.47 E-value=95 Score=19.24 Aligned_cols=36 Identities=14% Similarity=0.336 Sum_probs=22.2
Q ss_pred CCCCeeeEeeecCCCEEEEEE--cceeEEeeCCccccCC
Q 033358 82 KPGDVGRIISRKPKDVWAVRL--SIGTYLLEGKYFKPLE 118 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF--~rGtFLid~~yl~~~~ 118 (121)
..||.=.|+.. ..|-|.++. ..-.=++++.|+++++
T Consensus 23 ~~Gd~i~v~~~-~~~Ww~g~~~~~g~~G~~P~~yv~~~~ 60 (90)
T 3reb_B 23 QKGDQMVVLEE-SGEWWKARSLATRKEGYIPSNYVARVD 60 (90)
T ss_dssp CTTCEEEEEEC-SSSEEEEEETTTCCEEEEEGGGEEEEC
T ss_pred CCCCEEEEEEe-CCCEEEEEECCCCCEEEEehhheEECC
Confidence 34455555554 356788887 3334567888888764
No 113
>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A
Probab=31.21 E-value=89 Score=18.86 Aligned_cols=26 Identities=15% Similarity=0.170 Sum_probs=19.0
Q ss_pred CCCEEEEEEcceeEEeeCCccccCCC
Q 033358 94 PKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 94 P~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
..|-|..+...-.=++++.|++.++.
T Consensus 36 ~~gWw~g~~~g~~G~~P~~yV~~~~~ 61 (69)
T 2ydl_A 36 DVGWWEGELNGRRGVFPDNFVKLLPP 61 (69)
T ss_dssp STTEEEEEETTEEEEEEGGGEEECCS
T ss_pred CCCEEEEEECCcEEEecHHHEEECCC
Confidence 46778888755455789999988754
No 114
>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus}
Probab=31.19 E-value=40 Score=21.33 Aligned_cols=24 Identities=25% Similarity=0.210 Sum_probs=19.1
Q ss_pred CCEEEEEEcce-eEEeeCCccccCC
Q 033358 95 KDVWAVRLSIG-TYLLEGKYFKPLE 118 (121)
Q Consensus 95 ~d~waVRF~rG-tFLid~~yl~~~~ 118 (121)
.|.|.++...+ .=++++.|++.++
T Consensus 54 ~gWw~g~~~~~~~G~~P~~yv~~~~ 78 (93)
T 1wxu_A 54 RGWLLASLDGQTTGLIPANYVKILG 78 (93)
T ss_dssp SSCEEEESSSSSCEEECSTTEEECC
T ss_pred CCcEEEEeCCcCEEEEehHHEEEcC
Confidence 47888887766 6788999999875
No 115
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=31.06 E-value=19 Score=24.46 Aligned_cols=47 Identities=28% Similarity=0.497 Sum_probs=30.7
Q ss_pred eecCCc-cccccCCCCccCCCCeeeE-eeecCCCEEEEEEcceeEEeeC
Q 033358 65 IKTAAS-VPCLRANSGLVKPGDVGRI-ISRKPKDVWAVRLSIGTYLLEG 111 (121)
Q Consensus 65 LKTAdp-MPMLRPp~dLV~~gE~G~I-v~rrP~d~waVRF~rGtFLid~ 111 (121)
+||..| .-+.||+.++|.+||-=.| |.++|.++---.-.+-.|+|.+
T Consensus 47 VKTT~p~~y~VrP~~G~i~P~~s~~v~V~~~~~~~~p~~~~~dkF~V~s 95 (128)
T 1z9l_A 47 VKTTAPRRYCVRPNSGVIDPGSIVTVSVMLQPFDYDPNEKSKHKFMVQT 95 (128)
T ss_dssp EEESCGGGEEEESCEEEECTTCEEEEEEEECCCCCCTTCCCCCEEEEEE
T ss_pred EECCCCCceEEeCCCcEECCCCeEEEEEEECcCcCCcccccCCEEEEEE
Confidence 577775 7899999999999997655 4566654221112245666655
No 116
>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A
Probab=30.97 E-value=82 Score=18.35 Aligned_cols=35 Identities=11% Similarity=-0.018 Sum_probs=19.8
Q ss_pred CCeeeEeeecCCCEEEEEE--cceeEEeeCCccccCC
Q 033358 84 GDVGRIISRKPKDVWAVRL--SIGTYLLEGKYFKPLE 118 (121)
Q Consensus 84 gE~G~Iv~rrP~d~waVRF--~rGtFLid~~yl~~~~ 118 (121)
||+=.|+.....|-|..+- ..-.=++++.|+++++
T Consensus 28 Gd~i~v~~~~~~gW~~g~~~~~g~~G~~P~~yv~~~~ 64 (65)
T 2j05_A 28 GDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVG 64 (65)
T ss_dssp TCEEEEEEECTTSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred CCEEEEeEecCCCEEEEEECCCCCEEEEEhHHeEECc
Confidence 3333444444556777762 2223466888888764
No 117
>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}
Probab=30.92 E-value=88 Score=18.70 Aligned_cols=35 Identities=14% Similarity=0.143 Sum_probs=22.3
Q ss_pred CCeeeEeeecCCCEEEEEEcceeEEeeCCccccCC
Q 033358 84 GDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLE 118 (121)
Q Consensus 84 gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~ 118 (121)
||+=.|+.....|-|..+...-.=++++.|++.+.
T Consensus 35 Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~~~ 69 (73)
T 3c0c_A 35 GDLITLTNQIDENWYEGMLHGQSGFFPLSYVQVLV 69 (73)
T ss_dssp TCEEEEEEECSSSEEEEEETTEEEEEEGGGEEEEE
T ss_pred CCEEEEEEecCCCEEEEEECCCEEEeChHHEEECC
Confidence 34434444445677888875555678889988764
No 118
>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=30.80 E-value=83 Score=18.96 Aligned_cols=23 Identities=26% Similarity=0.472 Sum_probs=16.6
Q ss_pred CEEEEEEcce-eEEeeCCccccCC
Q 033358 96 DVWAVRLSIG-TYLLEGKYFKPLE 118 (121)
Q Consensus 96 d~waVRF~rG-tFLid~~yl~~~~ 118 (121)
|-|.+|...| .=++++.|++.++
T Consensus 54 ~Ww~g~~~~g~~G~~P~~yv~~~~ 77 (80)
T 2v1r_A 54 DWWKVRTKNGNIGYIPYNYIEIIK 77 (80)
T ss_dssp EEEEEECTTSCEEEEEGGGEEEC-
T ss_pred CcEEEEeCCCCeEEEEHHHeEEcC
Confidence 7888887433 4578999998875
No 119
>3r8n_Q 30S ribosomal protein S17; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_Q 3fih_Q* 3iy8_Q 3j18_Q* 2wwl_Q 3oar_Q 3oaq_Q 3ofb_Q 3ofa_Q 3ofp_Q 3ofx_Q 3ofy_Q 3ofo_Q 3r8o_Q 4a2i_Q 4gd1_Q 4gd2_Q 3i1m_Q 1vs7_Q* 3e1a_J ...
Probab=30.10 E-value=17 Score=24.34 Aligned_cols=20 Identities=30% Similarity=0.353 Sum_probs=17.4
Q ss_pred cccccCCcEEEEecCCceec
Q 033358 48 SKLAIGSPVIVIEAPKMIKT 67 (121)
Q Consensus 48 ~~~~IG~~Vrli~~ppYLKT 67 (121)
..+.+||.|.|.+-.|.=||
T Consensus 48 n~~~~GD~V~I~e~RPlSKt 67 (80)
T 3r8n_Q 48 NECGIGDVVEIRECRPLSKT 67 (80)
T ss_dssp GCCCTTCEEEEEEEEEEETT
T ss_pred CCCCCCCEEEEEEeccCCCc
Confidence 46899999999999888776
No 120
>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A
Probab=30.05 E-value=1e+02 Score=19.17 Aligned_cols=23 Identities=26% Similarity=0.472 Sum_probs=17.1
Q ss_pred CEEEEEEcce-eEEeeCCccccCC
Q 033358 96 DVWAVRLSIG-TYLLEGKYFKPLE 118 (121)
Q Consensus 96 d~waVRF~rG-tFLid~~yl~~~~ 118 (121)
|-|.+|.+.| .=++++.|++.++
T Consensus 54 gWw~g~~~~g~~G~~P~~yv~~~~ 77 (92)
T 1jqq_A 54 DWWKVRTKNGNIGYIPYNYIEIIK 77 (92)
T ss_dssp EEEEEEETTSCEEEEEGGGEEECC
T ss_pred CCeEEEeCCCCEEEEehHHeEECC
Confidence 7888888433 4577999998775
No 121
>2eb4_A 2-OXO-HEPT-3-ENE-1,7-dioate hydratase; lyase; 1.60A {Escherichia coli} PDB: 2eb5_A 2eb6_A
Probab=29.96 E-value=26 Score=26.75 Aligned_cols=31 Identities=19% Similarity=0.284 Sum_probs=27.5
Q ss_pred cccCCCCccCCCCeeeEeeecCCCEEEEEEcc
Q 033358 73 CLRANSGLVKPGDVGRIISRKPKDVWAVRLSI 104 (121)
Q Consensus 73 MLRPp~dLV~~gE~G~Iv~rrP~d~waVRF~r 104 (121)
-|+|. |+|..|=-+-+...+|||.+.++|..
T Consensus 228 tL~~G-DvI~TGT~~g~~~l~~GD~v~~~i~g 258 (267)
T 2eb4_A 228 QLEAG-QIILGGSFTRPVPARKGDTFHVDYGN 258 (267)
T ss_dssp CBCTT-CEEECCCSSCCEECCTTCEEEEECGG
T ss_pred CCCCC-CEEECCCCCCCEECCCCCEEEEEEcC
Confidence 58896 99999998889999999999999863
No 122
>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}
Probab=29.93 E-value=87 Score=18.37 Aligned_cols=25 Identities=20% Similarity=0.231 Sum_probs=17.5
Q ss_pred CCCEEEEEEcceeEEeeCCccccCC
Q 033358 94 PKDVWAVRLSIGTYLLEGKYFKPLE 118 (121)
Q Consensus 94 P~d~waVRF~rGtFLid~~yl~~~~ 118 (121)
..|-|.++...-.=++++.|++.++
T Consensus 38 ~~~Ww~g~~~g~~G~~P~~yv~~~~ 62 (69)
T 1wyx_A 38 LDGWWLCSLHGRQGIVPGNRLKILV 62 (69)
T ss_dssp CTTEEEEEETTEEEEEEGGGEEEEE
T ss_pred CCCcEEEEECCcEEEechhhEEECC
Confidence 4677888865445578889988764
No 123
>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=29.92 E-value=88 Score=18.40 Aligned_cols=25 Identities=16% Similarity=0.217 Sum_probs=18.3
Q ss_pred CCCEEEEEEcceeEEeeCCccccCC
Q 033358 94 PKDVWAVRLSIGTYLLEGKYFKPLE 118 (121)
Q Consensus 94 P~d~waVRF~rGtFLid~~yl~~~~ 118 (121)
..|-|.++...-.=++++.|++.++
T Consensus 41 ~~~W~~g~~~g~~G~~P~~yv~~~~ 65 (70)
T 2da9_A 41 DVGWWEGELNGRRGVFPDNFVKLLS 65 (70)
T ss_dssp STTEEEEECSSCEEEEEGGGEEECC
T ss_pred CCCeEEEEECCcEEEechHHeEECC
Confidence 4677888865445578999998875
No 124
>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.89 E-value=99 Score=19.09 Aligned_cols=26 Identities=8% Similarity=-0.104 Sum_probs=17.9
Q ss_pred CCCEEEEEEcceeEEeeCCccccCCC
Q 033358 94 PKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 94 P~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
-.|.|..+...-.=++++.|++++..
T Consensus 42 ~~~Ww~g~~~g~~G~fP~~yv~~~~~ 67 (85)
T 2dlp_A 42 EPGWQFGSAGGRSGLFPADIVQPAAA 67 (85)
T ss_dssp CTTEEEEESSSCEEEEETTSEEECCC
T ss_pred CCCeEEEEECCEEEEechHHeEECCC
Confidence 45677777754455778888887753
No 125
>1saw_A Hypothetical protein FLJ36880; structural genomics, fumarylacetoacetatehydrolase family, unknown function; 2.20A {Homo sapiens} SCOP: d.177.1.1
Probab=29.74 E-value=34 Score=25.51 Aligned_cols=31 Identities=13% Similarity=0.107 Sum_probs=26.5
Q ss_pred cccCCCCccCCCCeeeEeeecCCCEEEEEEcc
Q 033358 73 CLRANSGLVKPGDVGRIISRKPKDVWAVRLSI 104 (121)
Q Consensus 73 MLRPp~dLV~~gE~G~Iv~rrP~d~waVRF~r 104 (121)
-|+|. |+|..|=.+-+...+|||.+.+++..
T Consensus 182 tL~~G-DvI~TGTp~Gvg~l~~Gd~v~~~i~g 212 (225)
T 1saw_A 182 TLEEG-DIILTGTPKGVGPVKENDEIEAGIHG 212 (225)
T ss_dssp CBCTT-CEEECCCCSCCEEECTTCEEEEEETT
T ss_pred CcCCC-CEEEcCCCCCceeCCCCCEEEEEECC
Confidence 47885 99999888778889999999999863
No 126
>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A
Probab=29.51 E-value=99 Score=18.86 Aligned_cols=37 Identities=22% Similarity=0.298 Sum_probs=22.2
Q ss_pred CCCeeeEeeecCCCEEEEEEcc-e-eEEeeCCccccCCC
Q 033358 83 PGDVGRIISRKPKDVWAVRLSI-G-TYLLEGKYFKPLEL 119 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVRF~r-G-tFLid~~yl~~~~~ 119 (121)
.||+=.|+.....|-|..+..+ | .=++++.|++++.+
T Consensus 27 ~Gd~i~v~~~~~~gWw~g~~~~~g~~G~~P~nyVe~l~l 65 (65)
T 2lj0_A 27 DGDIVDVMEKCDDGWFVGTSRRTKQFGTFPGNYVKPLYL 65 (65)
T ss_dssp TTCEEEEEEECTTSEEEEEETTTCCEEEEETTSEEECCC
T ss_pred CCCEEEEeEeCCCCEEEEEECCCCCEEEEehhHeEEEeC
Confidence 3444444555555777666542 2 34778999988753
No 127
>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens}
Probab=29.38 E-value=82 Score=19.91 Aligned_cols=31 Identities=23% Similarity=0.158 Sum_probs=21.7
Q ss_pred eEeeecCCCEEEEEEcceeEEeeCCccccCC
Q 033358 88 RIISRKPKDVWAVRLSIGTYLLEGKYFKPLE 118 (121)
Q Consensus 88 ~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~ 118 (121)
.|+.....|-|..+...-.=++++.|++.++
T Consensus 44 ~Vl~~~~~gWw~g~~~g~~G~fP~nyV~~~~ 74 (79)
T 1z9q_A 44 FLLSRINKDWLEGTVRGATGIFPLSFVKILK 74 (79)
T ss_dssp CCCEESSSSEEEEEETTEEEEEEGGGEEESS
T ss_pred EEeEecCCCEEEEEECCeEEEecHHHEEECC
Confidence 3344445678888876555678999998875
No 128
>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B
Probab=29.20 E-value=1e+02 Score=21.90 Aligned_cols=38 Identities=16% Similarity=0.227 Sum_probs=29.7
Q ss_pred CCCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 82 KPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
..||+=.|+.....|-|.++...-.=++++.|++.++.
T Consensus 101 ~~Gd~i~vl~~~~~gWw~g~~~g~~G~~P~~yv~~~~~ 138 (193)
T 1ng2_A 101 LEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQKSGQ 138 (193)
T ss_dssp CTTCEEEEEECCTTSEEEEEETTEEEEEEGGGEEETTS
T ss_pred cCCCEEEEEEecCCCeEEEEECCCEEEEehHHeEECCC
Confidence 45777778887788999999865556889999988753
No 129
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=29.01 E-value=76 Score=25.21 Aligned_cols=54 Identities=11% Similarity=0.286 Sum_probs=39.8
Q ss_pred EEEecCCceecCCccccccCCCCc-cCCCCeeeEeeec-CCCEEEEEEcceeEEeeCCccccCC
Q 033358 57 IVIEAPKMIKTAASVPCLRANSGL-VKPGDVGRIISRK-PKDVWAVRLSIGTYLLEGKYFKPLE 118 (121)
Q Consensus 57 rli~~ppYLKTAdpMPMLRPp~dL-V~~gE~G~Iv~rr-P~d~waVRF~rGtFLid~~yl~~~~ 118 (121)
.+++.=.|-...+ .+| ++-||+=+|+... .++.|.+|...|.=++++.|+++++
T Consensus 45 ~~~alyd~~~~~~--------~els~~~gd~~~v~~~~~~~~w~~~~~~~~~G~~P~~yv~~~~ 100 (495)
T 1opk_A 45 LFVALYDFVASGD--------NTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVN 100 (495)
T ss_dssp EEEESSCBCCCST--------TBCCBCTTCEEEEEEECTTSSEEEEECSSCEEEEEGGGEEESS
T ss_pred EEEEeCCcCCCCC--------CCCCccCCCEEEEeecCCCCCceeeeecCCcceeccccccccc
Confidence 4566666755443 132 3568888888876 7899999999888899999998764
No 130
>3j20_R 30S ribosomal protein S17P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=28.88 E-value=27 Score=24.96 Aligned_cols=19 Identities=26% Similarity=0.469 Sum_probs=17.3
Q ss_pred ccccCCcEEEEecCCceec
Q 033358 49 KLAIGSPVIVIEAPKMIKT 67 (121)
Q Consensus 49 ~~~IG~~Vrli~~ppYLKT 67 (121)
++.+||.|+|.+-.|.=||
T Consensus 79 ~~~vGD~V~I~E~RPlSKt 97 (113)
T 3j20_R 79 NAKVGDKVLIAETRPLSKT 97 (113)
T ss_dssp CCCTTSEEEEEECSCSSSS
T ss_pred CCCCCCEEEEEecccCCCc
Confidence 6899999999999998877
No 131
>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=28.83 E-value=1e+02 Score=18.78 Aligned_cols=37 Identities=14% Similarity=-0.012 Sum_probs=24.2
Q ss_pred CCCeeeEeeec--CCCEEEEEEcceeEEeeCCccccCCC
Q 033358 83 PGDVGRIISRK--PKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 83 ~gE~G~Iv~rr--P~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
.||+=.|+... -.|-|.++...-.=+++..|++.++.
T Consensus 38 ~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~ 76 (81)
T 1x43_A 38 ADEVITVFSVVGMDSDWLMGERGNQKGKVPITYLELLNS 76 (81)
T ss_dssp TTCEEEEECCTTCCTTEEEEEETTEEEEEEGGGEEECCC
T ss_pred CCCEEEEEEcCCCCCCcEEEEECCCEEEEehHHEEECCC
Confidence 34444444443 26788888665556889999988753
No 132
>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=28.47 E-value=1e+02 Score=18.62 Aligned_cols=37 Identities=22% Similarity=0.331 Sum_probs=24.3
Q ss_pred CCCeeeEeeecCCCEEEEEEcc-e----eEEeeCCccccCCC
Q 033358 83 PGDVGRIISRKPKDVWAVRLSI-G----TYLLEGKYFKPLEL 119 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVRF~r-G----tFLid~~yl~~~~~ 119 (121)
.||+=.|+.....|-|..+... | .=++++.|++.++.
T Consensus 28 ~Gd~i~v~~~~~~gWw~g~~~~~g~~~~~G~fP~~yv~~~~~ 69 (80)
T 1ue9_A 28 PGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKLLGP 69 (80)
T ss_dssp TTCEEEEEEECSSSEEEEEECSCCSSCCEEEEETTSEEECCS
T ss_pred CCCEEEEEEecCCCcEEEEECCCCCCCcEEEEchHHeEECCC
Confidence 3444455555556788888763 2 45778999988753
No 133
>2cp2_A CLIP-115, KIAA0291; microtubule binding, cytoskeleton associated protein, CYLN2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.10.1 PDB: 2cp7_A
Probab=28.25 E-value=22 Score=24.45 Aligned_cols=21 Identities=19% Similarity=0.155 Sum_probs=14.7
Q ss_pred CCCcccccccccccCCcEEEE
Q 033358 39 SSGESDIRRSKLAIGSPVIVI 59 (121)
Q Consensus 39 ~~~~~~~~~~~~~IG~~Vrli 59 (121)
.+++..+....+.||++|.+.
T Consensus 8 ~s~~~~~~~~~~~vG~rV~V~ 28 (95)
T 2cp2_A 8 AAEVGDDFLGDFVVGERVWVN 28 (95)
T ss_dssp CSCCCBSSCCSCCTTCEEEGG
T ss_pred cchhhhhhhhcCcCCCEEEEC
Confidence 333444556779999999875
No 134
>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A
Probab=28.19 E-value=90 Score=17.93 Aligned_cols=34 Identities=15% Similarity=0.342 Sum_probs=19.0
Q ss_pred CCCeeeEeeecCCCEEEEEE-cce-eEEeeCCccccC
Q 033358 83 PGDVGRIISRKPKDVWAVRL-SIG-TYLLEGKYFKPL 117 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVRF-~rG-tFLid~~yl~~~ 117 (121)
.||+=.|+... .|-|.++- ..| .=++++.|++++
T Consensus 27 ~Gd~i~v~~~~-~~Ww~g~~~~~g~~G~~P~~yv~~~ 62 (62)
T 2iim_A 27 KGEQLRILEQS-GEWWKAQSLTTGQEGFIPFNFVAKA 62 (62)
T ss_dssp TTCEEEEEECC-SSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred CCCEEEEEEcC-CCEEEEEECCCCCEEEEEHHHEEEC
Confidence 34444444443 36777774 223 356788888764
No 135
>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}
Probab=28.10 E-value=32 Score=21.09 Aligned_cols=35 Identities=26% Similarity=0.503 Sum_probs=21.5
Q ss_pred CCeeeEeeecCCCEEEEEEcceeEEeeCCccccCC
Q 033358 84 GDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLE 118 (121)
Q Consensus 84 gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~ 118 (121)
||+=.|+.....|.|.++...-.=++.+.|++.++
T Consensus 13 Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~ 47 (77)
T 2jmc_A 13 GDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLD 47 (77)
T ss_dssp TCEEECCCCCCSSCCCEEETTEEECCCGGGEEECC
T ss_pred CCEEEEEEecCCCEEEEEECCcEEEEEeeEEEEcC
Confidence 44444444445677777765445677788887664
No 136
>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=28.09 E-value=1e+02 Score=18.48 Aligned_cols=36 Identities=14% Similarity=0.240 Sum_probs=23.2
Q ss_pred CCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 83 PGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
.||+=.|+... .|.|.++...-.=+++..|++.++.
T Consensus 31 ~Gd~i~v~~~~-~~Ww~g~~~g~~G~~P~~yv~~~~~ 66 (74)
T 1j3t_A 31 KHDIITVLEQQ-ENWWFGEVHGGRGWFPKSYVKIIPG 66 (74)
T ss_dssp TTCEEEEEEEC-SSEEEEESTTCCCEEEGGGEEECCC
T ss_pred CCCEEEEEecC-CCEEEEEECCcEEEEchHHeEECCC
Confidence 34444455553 5788888754445778999988754
No 137
>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1
Probab=27.79 E-value=99 Score=18.30 Aligned_cols=36 Identities=19% Similarity=0.306 Sum_probs=21.8
Q ss_pred CCCCeeeEeeecCCCEEEEE-EcceeEEeeCCccccC
Q 033358 82 KPGDVGRIISRKPKDVWAVR-LSIGTYLLEGKYFKPL 117 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVR-F~rGtFLid~~yl~~~ 117 (121)
+.||+=.|+.....|-|.++ ...-.=++++.|++++
T Consensus 23 ~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~ 59 (65)
T 1b07_A 23 KKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKY 59 (65)
T ss_dssp CTTCEEEEEECSSSSEEEEECTTSCEEEEEGGGEEEC
T ss_pred cCCCEEEEEEecCCCeEEEEECCCCEEEEChHHEeec
Confidence 34454455555556778887 3322347788888765
No 138
>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=27.26 E-value=59 Score=20.82 Aligned_cols=64 Identities=8% Similarity=0.044 Sum_probs=35.0
Q ss_pred CcEEEEecCCceecCCccccccCCCCc-cCCCCeeeEe-eecCCCEEEEEEcce-eEEeeCCccccCCC
Q 033358 54 SPVIVIEAPKMIKTAASVPCLRANSGL-VKPGDVGRII-SRKPKDVWAVRLSIG-TYLLEGKYFKPLEL 119 (121)
Q Consensus 54 ~~Vrli~~ppYLKTAdpMPMLRPp~dL-V~~gE~G~Iv-~rrP~d~waVRF~rG-tFLid~~yl~~~~~ 119 (121)
....+++.-.|-...+|-+- ++.+| ++.||+=.|+ .....|.|.++...| .=++++.|++.+..
T Consensus 16 ~~~~~~Alydy~~~~~~~~~--~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~~~g~~G~~Psnyv~~~~~ 82 (96)
T 1wie_A 16 KVHLCVARYSYNPFDGPNEN--PEAELPLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSNFVDFVQD 82 (96)
T ss_dssp CEEEEEESSCCCGGGSSCSC--TTTBCCCCTTCEEEEESSCCSSSCCEEEETTCCBCBCCTTSEECCCS
T ss_pred CCcEEEECCccCCCcccCCC--CCCeeeECCCCEEEEeEecCCCCEEEEEECCCCEEEEchHHEEEcCC
Confidence 33445566666554321111 11122 2345555555 445678899988333 34678999988754
No 139
>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}
Probab=27.26 E-value=91 Score=18.61 Aligned_cols=31 Identities=26% Similarity=0.345 Sum_probs=20.0
Q ss_pred EeeecCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 89 IISRKPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 89 Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
|+.....|-|..+...-.=++++.|++.+..
T Consensus 28 v~~~~~~gWw~g~~~g~~G~fP~~yv~~~~~ 58 (65)
T 2fei_A 28 INEEVEEGWWSGTLNNKLGLFPSNFVKELEL 58 (65)
T ss_dssp CCCCSSSSEEEEESSSCEEEEETTTSCBCCC
T ss_pred EEEecCCCEEEEEECCcEEEecHHHEEEcCC
Confidence 3333345777777654455778999987753
No 140
>1wzo_A HPCE; structural genomics, riken structural genomics/proteom initiative, RSGI, NPPSFA, isomerase; 1.90A {Thermus thermophilus}
Probab=27.19 E-value=35 Score=25.75 Aligned_cols=31 Identities=19% Similarity=0.260 Sum_probs=26.7
Q ss_pred cccCCCCccCCCCeeeEeeecCCCEEEEEEcc
Q 033358 73 CLRANSGLVKPGDVGRIISRKPKDVWAVRLSI 104 (121)
Q Consensus 73 MLRPp~dLV~~gE~G~Iv~rrP~d~waVRF~r 104 (121)
-|+|. |+|..|=.+-+..++|||.+.+++..
T Consensus 204 tL~pG-DvI~TGTp~gvg~l~~GD~v~~~i~g 234 (246)
T 1wzo_A 204 TLEPY-DVLLTGTPKGISQVRPGDVMRLEIEG 234 (246)
T ss_dssp CBCTT-CEEECCCCCCSCEECTTCEEEEEETT
T ss_pred CcCCC-CEEEeCCCCCceECCCCCEEEEEEcC
Confidence 47885 99999888888889999999999863
No 141
>2xzm_Q Ribosomal protein S17 containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_Q
Probab=27.06 E-value=31 Score=26.06 Aligned_cols=21 Identities=14% Similarity=0.132 Sum_probs=18.1
Q ss_pred cccccCCcEEEEecCCceecC
Q 033358 48 SKLAIGSPVIVIEAPKMIKTA 68 (121)
Q Consensus 48 ~~~~IG~~Vrli~~ppYLKTA 68 (121)
.++.+||.|+|.+-.|.=||-
T Consensus 114 n~~kvGD~V~I~EcRPLSKtK 134 (157)
T 2xzm_Q 114 FSVKEGDILVAGQCRPISKTV 134 (157)
T ss_dssp SCCCTTCEEEEEECCCCSSSC
T ss_pred CCCCCCCEEEEEEcCCCCCcE
Confidence 358999999999999988874
No 142
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=26.81 E-value=26 Score=24.65 Aligned_cols=47 Identities=28% Similarity=0.504 Sum_probs=30.9
Q ss_pred eecCCc-cccccCCCCccCCCCeeeE-eeecCCCEEEEEEcceeEEeeC
Q 033358 65 IKTAAS-VPCLRANSGLVKPGDVGRI-ISRKPKDVWAVRLSIGTYLLEG 111 (121)
Q Consensus 65 LKTAdp-MPMLRPp~dLV~~gE~G~I-v~rrP~d~waVRF~rGtFLid~ 111 (121)
+||..| .-+.||+.++|.+||-=.| |.++|.++---...+-.|||.+
T Consensus 51 VKTT~p~~y~VrP~~GiI~P~~s~~v~V~l~~~~~~p~~~~kDKFlVqs 99 (147)
T 2cri_A 51 VKTTAPRRYCVRPNSGIIDPGSIVTVSVMLQPFDYDPNEKSKHKFMVQT 99 (147)
T ss_dssp EEESCTTSEEEESSEEECCTTCEEEEEEEECCCCCCTTCCSCCCEEEEE
T ss_pred EECCCCccEEEcCCCcEECCCCeEEEEEEECCCcCCccccCCCEEEEEE
Confidence 577775 7899999999999997654 4566654321112245666654
No 143
>3a8g_B NitrIle hydratase subunit beta; Fe, iron, lyase, metal-binding, oxidation; 1.11A {Rhodococcus erythropolis} PDB: 2ahj_B 2cyz_B* 2cz0_B 2cz6_B 2cz7_B 2d0q_B 2cz1_B 2zcf_B 2zpb_B 2zpe_B 2zpf_B 2zpg_B 2zph_B 2zpi_B 2qdy_B 3a8h_B 3a8l_B 3a8o_B 3a8m_B 1ahj_B
Probab=26.47 E-value=25 Score=27.30 Aligned_cols=37 Identities=19% Similarity=0.196 Sum_probs=24.8
Q ss_pred ccccccccCCcEEEEecCCceecCCccccccCCCCccCCCCeeeEe
Q 033358 45 IRRSKLAIGSPVIVIEAPKMIKTAASVPCLRANSGLVKPGDVGRII 90 (121)
Q Consensus 45 ~~~~~~~IG~~Vrli~~ppYLKTAdpMPMLRPp~dLV~~gE~G~Iv 90 (121)
.....|++||+|++...+|-=-|--|. .--|-.|+|+
T Consensus 118 ~~~~~F~vGd~Vrv~~~~~~gHtR~P~---------YvRGk~G~I~ 154 (212)
T 3a8g_B 118 VETTTFEVGQRVRVRDEYVPGHIRMPA---------YCRGRVGTIS 154 (212)
T ss_dssp SCCCCCCTTCEEEECCCCCSSCCSCCG---------GGTTCEEEEE
T ss_pred CcCcccCCCCeEEEecCCCCCcccccH---------HHCCCeEEEE
Confidence 456789999999999776533332222 3357788884
No 144
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=26.29 E-value=1.2e+02 Score=18.78 Aligned_cols=21 Identities=14% Similarity=0.268 Sum_probs=15.3
Q ss_pred eeecCCCEEEEEE----cceeEEee
Q 033358 90 ISRKPKDVWAVRL----SIGTYLLE 110 (121)
Q Consensus 90 v~rrP~d~waVRF----~rGtFLid 110 (121)
+.+.|+..|.+.| .-|+|..-
T Consensus 65 ~~~~pG~~~~~~f~~~~~~G~y~y~ 89 (106)
T 2gim_A 65 LLMSPGQSTSTTFPADAPAGEYTFY 89 (106)
T ss_dssp CCCSTTCEEEEECCTTCCSEEEEEE
T ss_pred eeeCCCCEEEEEEecCCCCceEEEE
Confidence 3467888888888 46888653
No 145
>2zkq_q 40S ribosomal protein S11E; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} PDB: 3jyv_Q* 1s1h_Q
Probab=26.16 E-value=29 Score=26.21 Aligned_cols=20 Identities=35% Similarity=0.363 Sum_probs=17.0
Q ss_pred ccccCCcEEEEecCCceecC
Q 033358 49 KLAIGSPVIVIEAPKMIKTA 68 (121)
Q Consensus 49 ~~~IG~~Vrli~~ppYLKTA 68 (121)
++.+||.|+|.|-.|.=||-
T Consensus 119 ~~kvGD~V~I~E~RPLSKtK 138 (158)
T 2zkq_q 119 DVQIGDIVTVGECRPLSKTV 138 (158)
T ss_dssp CC-CCCEEEEECCSCSSSCC
T ss_pred cCCCCCEEEEEEccccCCcE
Confidence 58999999999999998874
No 146
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=25.57 E-value=1.3e+02 Score=19.99 Aligned_cols=22 Identities=23% Similarity=0.299 Sum_probs=16.9
Q ss_pred eecCCCEEEEEEc---ceeEEeeCC
Q 033358 91 SRKPKDVWAVRLS---IGTYLLEGK 112 (121)
Q Consensus 91 ~rrP~d~waVRF~---rGtFLid~~ 112 (121)
.+.|+..+.|.|. -|+|..--.
T Consensus 100 ~l~pGet~~v~f~~~~pG~y~f~C~ 124 (139)
T 2aan_A 100 LANGNETVEVTFTAPAAGTYLYICT 124 (139)
T ss_dssp CBCTTCEEEEEEECCSSEEEEEECC
T ss_pred ccCCCCEEEEEEECCCCeEEEEEcC
Confidence 3688999999985 799876544
No 147
>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A
Probab=25.52 E-value=1.1e+02 Score=17.96 Aligned_cols=36 Identities=3% Similarity=-0.135 Sum_probs=21.9
Q ss_pred CCCeeeEeeecCCCEEEEEEcc-----eeEEeeCCccccCC
Q 033358 83 PGDVGRIISRKPKDVWAVRLSI-----GTYLLEGKYFKPLE 118 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVRF~r-----GtFLid~~yl~~~~ 118 (121)
.||+=.|+...-.|-|..+... -.=++++.|+++++
T Consensus 28 ~Gd~i~v~~~~~~~Ww~g~~~~~g~~~~~G~fP~~yv~~~~ 68 (68)
T 1tg0_A 28 KDQEIIVTSVEDAEWYFGEYQDSNGDVIEGIFPKSFVAVQG 68 (68)
T ss_dssp TTCEEEEEEECSSSEEEEEEECTTSCEEEEEEEGGGEEECC
T ss_pred CCCEEEEEEecCCCeEEEEECCCCCCCEEEEEchHHEEECC
Confidence 3444445554556778777654 34467888887653
No 148
>3bbn_Q Ribosomal protein S17; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=25.44 E-value=28 Score=26.00 Aligned_cols=21 Identities=19% Similarity=0.308 Sum_probs=18.5
Q ss_pred cccccCCcEEEEecCCceecC
Q 033358 48 SKLAIGSPVIVIEAPKMIKTA 68 (121)
Q Consensus 48 ~~~~IG~~Vrli~~ppYLKTA 68 (121)
.++.+||.|+|.|-.|.=||-
T Consensus 106 n~~kvGD~V~I~E~RPLSKtK 126 (142)
T 3bbn_Q 106 NQFKVGDVVRLEKSRPISKTK 126 (142)
T ss_dssp CCCCTTEEEEEEECCCSSSSC
T ss_pred CCCCCCCEEEEEEccCCCCcE
Confidence 479999999999999988873
No 149
>1nz9_A Transcription antitermination protein NUSG; transcription elongation, riken structural genomics/proteomics initiative, RSGI; NMR {Thermus thermophilus} SCOP: b.34.5.4
Probab=25.39 E-value=25 Score=21.00 Aligned_cols=36 Identities=19% Similarity=0.259 Sum_probs=26.2
Q ss_pred cccccCCcEEEEecCCceecCCccccccCCCCccCCCCeeeEeeecCC-CEEEEEE
Q 033358 48 SKLAIGSPVIVIEAPKMIKTAASVPCLRANSGLVKPGDVGRIISRKPK-DVWAVRL 102 (121)
Q Consensus 48 ~~~~IG~~Vrli~~ppYLKTAdpMPMLRPp~dLV~~gE~G~Iv~rrP~-d~waVRF 102 (121)
..|.+||.|++++-|= -|-+|+|....+. +...|.+
T Consensus 3 ~~~~~Gd~V~V~~Gpf-------------------~g~~g~v~~v~~~k~~v~V~v 39 (58)
T 1nz9_A 3 VAFREGDQVRVVSGPF-------------------ADFTGTVTEINPERGKVKVMV 39 (58)
T ss_dssp CSCCTTCEEEECSGGG-------------------TTCEEEEEEEETTTTEEEEEE
T ss_pred cccCCCCEEEEeecCC-------------------CCcEEEEEEEcCCCCEEEEEE
Confidence 4578899999987542 4678999988775 4666654
No 150
>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus}
Probab=25.21 E-value=1.4e+02 Score=19.04 Aligned_cols=37 Identities=24% Similarity=0.407 Sum_probs=23.1
Q ss_pred CCCCeeeEeeecCCCEEEEEE--cceeEEeeCCccccCC
Q 033358 82 KPGDVGRIISRKPKDVWAVRL--SIGTYLLEGKYFKPLE 118 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF--~rGtFLid~~yl~~~~ 118 (121)
+.||+=.|+...-.|-|.++- ..-.=++++.|+++++
T Consensus 47 ~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~ 85 (109)
T 2yt6_A 47 KKGERFQIINNTEGDWWEARSIATGKSGYIPSNYVVPAD 85 (109)
T ss_dssp CTTCEEEEEECSCTTCEEEEESSSCCEEEECTTTEEESS
T ss_pred CCCCEEEEEEccCCCcEEEEECCCCCEEEechHHcEECC
Confidence 344544555555567777775 3334577888888775
No 151
>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A
Probab=24.66 E-value=1.2e+02 Score=18.29 Aligned_cols=36 Identities=28% Similarity=0.339 Sum_probs=20.6
Q ss_pred CCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 84 GDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 84 gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
||+=.|+.....|-|..+...-.=++++.|++.++.
T Consensus 33 Gd~i~v~~~~~~gWw~g~~~g~~G~fP~~yv~~~~~ 68 (73)
T 2ebp_A 33 GDIIDIISKPPMGTWMGLLNNKVGTFKFIYVDVLSS 68 (73)
T ss_dssp SCEEEEEECCSSSCEEEECSSCEEEECSTTEEECCC
T ss_pred CCEEEEEEeCCCCeEEEEECCCEEEEeHHHEEECCC
Confidence 333344444445666666543344668888887653
No 152
>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}
Probab=24.64 E-value=1.2e+02 Score=18.34 Aligned_cols=37 Identities=14% Similarity=0.103 Sum_probs=23.4
Q ss_pred CCCeeeEeeecCCCEEEEEEcc--eeEEeeCCccccCCC
Q 033358 83 PGDVGRIISRKPKDVWAVRLSI--GTYLLEGKYFKPLEL 119 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVRF~r--GtFLid~~yl~~~~~ 119 (121)
.||+=.|+.....|-|.++..+ -.=++++.|++.++.
T Consensus 26 ~Gd~i~v~~~~~~gWw~g~~~~~g~~G~~P~~yv~~~~~ 64 (73)
T 2lcs_A 26 EGDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSYIQP 64 (73)
T ss_dssp TTCEEEEEEEETTTEEEEECTTSSCEEEEESTTEEECCS
T ss_pred CCCEEEEEEEcCCCEEEEEECCCCCEEEeeHHHEEECCC
Confidence 3444445555556788888752 244778999987753
No 153
>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}
Probab=24.58 E-value=1.2e+02 Score=18.00 Aligned_cols=26 Identities=15% Similarity=0.170 Sum_probs=18.5
Q ss_pred CCCEEEEEEcceeEEeeCCccccCCC
Q 033358 94 PKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 94 P~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
..|-|..+...-.=++++.|++.++.
T Consensus 43 ~~~W~~g~~~g~~G~~P~~yv~~~~~ 68 (73)
T 2k9g_A 43 DVGWWEGELNGRRGVFPDNFVKLLPP 68 (73)
T ss_dssp STTEEEEEETTEEEEEEGGGEEECCS
T ss_pred CCCEEEEEECCeEEEEchHHEEECCc
Confidence 45677777654456789999988753
No 154
>2zkr_t 60S ribosomal protein L26; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=24.35 E-value=76 Score=23.43 Aligned_cols=36 Identities=17% Similarity=0.211 Sum_probs=27.3
Q ss_pred cccccccCCcEEEEecCCceecCCccccccCCCCccCCCCe-eeEeeecCCCEEEE
Q 033358 46 RRSKLAIGSPVIVIEAPKMIKTAASVPCLRANSGLVKPGDV-GRIISRKPKDVWAV 100 (121)
Q Consensus 46 ~~~~~~IG~~Vrli~~ppYLKTAdpMPMLRPp~dLV~~gE~-G~Iv~rrP~d~waV 100 (121)
.++.+..||.|.|+.-+ .-|.. |.|+..-|...|.+
T Consensus 45 r~~~IkkGD~V~Vi~Gk-------------------dKGk~~GkV~~V~~k~~~V~ 81 (145)
T 2zkr_t 45 RSMPIRKDDEVQVVRGH-------------------YKGQQIGKVVQVYRKKYVIY 81 (145)
T ss_dssp -CCBCCTTCEEEECSST-------------------TTTCCSEEEEEEETTTTEEE
T ss_pred cccccCCCCEEEEeecC-------------------CCCcceeEEEEEECCCCEEE
Confidence 45789999999998764 24777 99999888876653
No 155
>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1
Probab=24.27 E-value=1.2e+02 Score=17.90 Aligned_cols=35 Identities=23% Similarity=0.433 Sum_probs=18.6
Q ss_pred CCeeeEee-ecCCCEEEEEEcce-eEEeeCCccccCC
Q 033358 84 GDVGRIIS-RKPKDVWAVRLSIG-TYLLEGKYFKPLE 118 (121)
Q Consensus 84 gE~G~Iv~-rrP~d~waVRF~rG-tFLid~~yl~~~~ 118 (121)
||+=.|+. ..-.|-|.++-..| .=++++.|+++.+
T Consensus 33 Gd~i~v~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~ 69 (71)
T 1csk_A 33 GDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKRE 69 (71)
T ss_dssp TCEEEEEEECSSTTEEEEECTTSCEEEEETTSEEC--
T ss_pred CCEEEEeECCCCCCCEEEEeCCCCEEEEehHHeEEcc
Confidence 33333444 23456777773233 3467888888764
No 156
>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A
Probab=24.23 E-value=1.2e+02 Score=17.93 Aligned_cols=36 Identities=19% Similarity=0.327 Sum_probs=22.1
Q ss_pred CCCeeeEeeecCCCEEEEEEccee-EEeeCCccccCCC
Q 033358 83 PGDVGRIISRKPKDVWAVRLSIGT-YLLEGKYFKPLEL 119 (121)
Q Consensus 83 ~gE~G~Iv~rrP~d~waVRF~rGt-FLid~~yl~~~~~ 119 (121)
.||+=.|+... .|-|.+|-..|. =++++.|++++..
T Consensus 29 ~Gd~i~v~~~~-~~Ww~~~~~~g~~G~~P~~yv~~~~~ 65 (68)
T 2k2m_A 29 QRDVLEVLDDS-RKWWKVRDPAGQEGYVPYNILTPYPA 65 (68)
T ss_dssp TTCEEEEEECS-SSEEEEECTTSCCEEEEGGGEEECCS
T ss_pred CCCEEEEEEcC-CCeEEEEeCCCCEEEEEhhhEEEcCC
Confidence 34444455444 677888754333 4678899887753
No 157
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=24.05 E-value=29 Score=24.76 Aligned_cols=44 Identities=18% Similarity=0.221 Sum_probs=29.7
Q ss_pred eecCCc-cccccCCCCccCCCCeeeEe-eecCCCEEEEEEcceeEEeeC
Q 033358 65 IKTAAS-VPCLRANSGLVKPGDVGRII-SRKPKDVWAVRLSIGTYLLEG 111 (121)
Q Consensus 65 LKTAdp-MPMLRPp~dLV~~gE~G~Iv-~rrP~d~waVRF~rGtFLid~ 111 (121)
+||..| .-+.||+.++|.+|+-=.|. -++|... + -.+-.|||.+
T Consensus 55 VKTT~p~~y~VrP~~GiI~P~~s~~V~V~lq~~~~-~--~~kDKFlVqs 100 (152)
T 1wic_A 55 VRTTAPEKYRVKPSNSSCDPGASIDIIVSPHGGLT-V--SAQDRFLIMA 100 (152)
T ss_dssp EEESCTTTEEEESSEEEECTTCEEEEEEEECSSSC-C--CSSCCEEEEE
T ss_pred EECCCCCceeecCCCcEECCCCeEEEEEEecCccc-C--CCCCEEEEEE
Confidence 577775 88999999999999876554 4444321 1 2345677755
No 158
>1nkq_A Hypothetical 28.8 kDa protein in PSD1-SKO1 intergenic region; dimer, PSI, protein structure initiative; 2.20A {Saccharomyces cerevisiae} SCOP: d.177.1.1
Probab=24.04 E-value=46 Score=25.76 Aligned_cols=33 Identities=18% Similarity=0.194 Sum_probs=27.9
Q ss_pred cccCCCCccCCCCeeeEeeecCCCEEEEEEc-cee
Q 033358 73 CLRANSGLVKPGDVGRIISRKPKDVWAVRLS-IGT 106 (121)
Q Consensus 73 MLRPp~dLV~~gE~G~Iv~rrP~d~waVRF~-rGt 106 (121)
-|+|. |+|..|=.+-+..++|||.+.+++. .|+
T Consensus 205 tL~pG-DvI~TGTp~Gvg~l~~GD~v~~~i~glG~ 238 (259)
T 1nkq_A 205 SLEPG-DIILTGTPAGVGELKPGDRVHCELLQNND 238 (259)
T ss_dssp CBCTT-CEEECCCCSCCEEECTTCEEEEEEEETTE
T ss_pred CcCCC-CEEEeCCCCCcEecCCCCEEEEEEEcCCc
Confidence 47885 9999998888888999999999996 464
No 159
>2vqe_Q 30S ribosomal protein S17; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: b.40.4.5 PDB: 1gix_T* 1hnw_Q* 1hnx_Q* 1hnz_Q* 1hr0_Q 1ibk_Q* 1ibl_Q* 1ibm_Q 1jgo_T* 1jgp_T* 1jgq_T* 1ml5_T* 1xmo_Q* 1xmq_Q* 1xnq_Q* 1xnr_Q* 1yl4_T 2b64_Q* 2b9m_Q* 2b9o_Q* ...
Probab=23.91 E-value=25 Score=24.77 Aligned_cols=19 Identities=32% Similarity=0.450 Sum_probs=16.9
Q ss_pred ccccCCcEEEEecCCceec
Q 033358 49 KLAIGSPVIVIEAPKMIKT 67 (121)
Q Consensus 49 ~~~IG~~Vrli~~ppYLKT 67 (121)
.+.+||.|.|.+-.|.=||
T Consensus 50 ~~k~GD~V~I~E~RPlSKt 68 (105)
T 2vqe_Q 50 KYKLGDVVEIIESRPISKR 68 (105)
T ss_dssp CCCTTCEEEEEEEEEEETT
T ss_pred CCCCCCEEEEEEcccCCCC
Confidence 5889999999999998776
No 160
>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}
Probab=23.18 E-value=72 Score=19.40 Aligned_cols=37 Identities=14% Similarity=0.234 Sum_probs=24.2
Q ss_pred cCCCCeeeEeeecCCCEEEEEEcce-eEEeeCCccccC
Q 033358 81 VKPGDVGRIISRKPKDVWAVRLSIG-TYLLEGKYFKPL 117 (121)
Q Consensus 81 V~~gE~G~Iv~rrP~d~waVRF~rG-tFLid~~yl~~~ 117 (121)
++.||+=.|+.....|-|.++...| .=++++.|++.+
T Consensus 23 ~~~Gd~i~v~~~~~~~Ww~g~~~~G~~G~fP~nyVe~i 60 (60)
T 2lx7_A 23 FAAGELITLLQVPDGGWWEGEKEDGLRGWFPASYVQLL 60 (60)
T ss_dssp CCTTCEEEBSCCCTTSCEEEECTTSCEEEECGGGEEEC
T ss_pred CCCCCEEEEeEecCCCeEEEEeCCCCEEEEcHHHEEEC
Confidence 4445555566666678888887554 357788887753
No 161
>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.12 E-value=1.3e+02 Score=17.90 Aligned_cols=26 Identities=8% Similarity=0.118 Sum_probs=18.6
Q ss_pred CCCEEEEEEcceeEEeeCCccccCCC
Q 033358 94 PKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 94 P~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
..|-|..+...-.=++++.|++.++.
T Consensus 43 ~~~Ww~g~~~g~~G~~P~~yv~~~~~ 68 (73)
T 2dl7_A 43 DDGFWEGEFNGRIGVFPSVLVEELSS 68 (73)
T ss_dssp SSSCEEEEETTEEEEECSSSEEECCS
T ss_pred CCCcEEEEECCCEEEEChHHEEECCC
Confidence 45678777654456789999988754
No 162
>2wqt_A 2-keto-4-pentenoate hydratase; lyase, dodecahedral form, aromatic hydrocarbons catabolism; 2.80A {Escherichia coli} PDB: 1sv6_A
Probab=23.12 E-value=30 Score=26.57 Aligned_cols=31 Identities=16% Similarity=0.373 Sum_probs=24.9
Q ss_pred cccCCCCccCCCCeeeEeeecCCCEEEEEEcc
Q 033358 73 CLRANSGLVKPGDVGRIISRKPKDVWAVRLSI 104 (121)
Q Consensus 73 MLRPp~dLV~~gE~G~Iv~rrP~d~waVRF~r 104 (121)
-|+|. |+|..|=.+-+...+|||.+.++|..
T Consensus 222 tL~~G-dvI~TGT~~g~~~l~~GD~v~~~i~g 252 (270)
T 2wqt_A 222 PLRTG-DIILTGALGPMVAVNAGDRFEAHIEG 252 (270)
T ss_dssp CBCTT-CEEEEEESSCCEECCTTCEEEEEETT
T ss_pred CcCCC-CEEEcCCCCCCeeCCCCCEEEEEEcC
Confidence 37785 88888877778889999999998863
No 163
>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.78 E-value=1.2e+02 Score=17.71 Aligned_cols=36 Identities=14% Similarity=0.111 Sum_probs=21.6
Q ss_pred CCeeeEeeec-CCCEEEEEEcce-eEEeeCCccccCCC
Q 033358 84 GDVGRIISRK-PKDVWAVRLSIG-TYLLEGKYFKPLEL 119 (121)
Q Consensus 84 gE~G~Iv~rr-P~d~waVRF~rG-tFLid~~yl~~~~~ 119 (121)
||+=+|+... ..+.|.+|...| .=++++.|++.++.
T Consensus 29 Gd~i~vl~~~~~~gW~~~~~~~g~~G~~P~~yv~~~~~ 66 (70)
T 2ct4_A 29 GEDLSLMEEDKGDGWTRVRRKEGGEGYVPTSYLRVTSG 66 (70)
T ss_dssp TCEEEEEECCSSSCEEEEECSSSCEEEEEGGGEEECCC
T ss_pred CCEEEEEeccCCCCeEEEEeCCCCEEEEEhHHeEEcCC
Confidence 3443444433 245788887633 35778999987653
No 164
>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.76 E-value=1.4e+02 Score=18.42 Aligned_cols=38 Identities=13% Similarity=0.203 Sum_probs=28.2
Q ss_pred CCCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 82 KPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
+.||+=.|+...-.|.|.++...+.=++++.|++.+..
T Consensus 37 ~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~ 74 (88)
T 1x2q_A 37 KHGEIIIVLDDSDANWWKGENHRGIGLFPSNFVTTNLN 74 (88)
T ss_dssp CSSCEEEEEECSCSSSEEEEETTEEEEECGGGEESCSS
T ss_pred CCCCEEEEEEeCCCCEEEEEECCcEEEEehHHEEEcCC
Confidence 44555556665567889999887788899999988754
No 165
>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}
Probab=22.75 E-value=1.2e+02 Score=17.36 Aligned_cols=34 Identities=24% Similarity=0.250 Sum_probs=22.1
Q ss_pred CCCCeeeEeeecCCCEEEEEEcceeEEeeCCccc
Q 033358 82 KPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFK 115 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~ 115 (121)
+.||+=.|+.....|.|.++...-.=++++.|++
T Consensus 26 ~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~ 59 (60)
T 2gnc_A 26 KKGASLLLYHRASEDWWEGRHNGIDGLVPHQYIV 59 (60)
T ss_dssp CTTCEEEEEEEEETTEEEEEETTEEEEEEGGGEE
T ss_pred CCCCEEEEEEecCCCEEEEEECCeEEEEeHhhEE
Confidence 3455555555556788888886445577777765
No 166
>1whk_A 1700024K14RIK, riken cDNA 1700024K14; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.34.10.1
Probab=22.56 E-value=43 Score=22.71 Aligned_cols=17 Identities=35% Similarity=0.337 Sum_probs=13.6
Q ss_pred ccccccccccCCcEEEE
Q 033358 43 SDIRRSKLAIGSPVIVI 59 (121)
Q Consensus 43 ~~~~~~~~~IG~~Vrli 59 (121)
+.+....+.|||+|.+.
T Consensus 6 ~~~~~~~~~vG~rV~V~ 22 (91)
T 1whk_A 6 SGEGTVKLHEGSQVLLT 22 (91)
T ss_dssp SSCCCCCCCSSCEEEES
T ss_pred CCCCCccccCCCEEEEC
Confidence 44666789999999885
No 167
>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1
Probab=22.51 E-value=1.3e+02 Score=17.76 Aligned_cols=36 Identities=17% Similarity=0.060 Sum_probs=22.9
Q ss_pred CCeeeEeee-cCCCEEEEEEc--ceeEEeeCCccccCCC
Q 033358 84 GDVGRIISR-KPKDVWAVRLS--IGTYLLEGKYFKPLEL 119 (121)
Q Consensus 84 gE~G~Iv~r-rP~d~waVRF~--rGtFLid~~yl~~~~~ 119 (121)
||+=+|+.. ...|-|..+.. .-.=++++.|+++++.
T Consensus 30 Gd~i~v~~~~~~~gWw~g~~~~~g~~G~fP~~yv~~~~~ 68 (72)
T 1spk_A 30 GDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYTKLLSG 68 (72)
T ss_dssp TCEEEECCSSCBTTEEEEEETTTCCEEEEEGGGCEECSS
T ss_pred CCEEEEeEccCCCCcEEEEECCCCCEEEEehHHeEECCC
Confidence 444344443 45678888887 2234678999988764
No 168
>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.39 E-value=1.3e+02 Score=17.69 Aligned_cols=37 Identities=11% Similarity=0.173 Sum_probs=23.4
Q ss_pred CCCCeeeEeeecCCCEEEEEEcce-eEEeeCCccccCCC
Q 033358 82 KPGDVGRIISRKPKDVWAVRLSIG-TYLLEGKYFKPLEL 119 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF~rG-tFLid~~yl~~~~~ 119 (121)
+.||+=.|+... .|-|.+|-..| .=++++.|++.++.
T Consensus 27 ~~Gd~i~v~~~~-~~Ww~~~~~~g~~G~~P~~yv~~~~~ 64 (68)
T 1wxb_A 27 LKDEVLEVLEDG-RQWWKLRSRSGQAGYVPCNILGEASG 64 (68)
T ss_dssp CTTCEEEEEECS-SSEEEEECTTSCEEEEETTTCCBCCC
T ss_pred CCCCEEEEEEcC-CCEEEEEECCCCEEEEEHHHeEECCC
Confidence 334444555543 67888885334 35789999998753
No 169
>2zjr_R 50S ribosomal protein L24; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: b.34.5.1 PDB: 1nwx_S* 1nwy_S* 1sm1_S* 1xbp_S* 2d3o_S 2zjp_R* 2zjq_R 1nkw_S 3cf5_R* 3dll_R* 3pio_R* 3pip_R* 1pnu_S 1pny_S 1vor_V 1vou_V 1vow_V 1voy_V 1vp0_V
Probab=22.17 E-value=76 Score=22.33 Aligned_cols=35 Identities=26% Similarity=0.506 Sum_probs=26.3
Q ss_pred ccccccCCcEEEEecCCceecCCccccccCCCCccCCCCeeeEeeecCCCEEEE
Q 033358 47 RSKLAIGSPVIVIEAPKMIKTAASVPCLRANSGLVKPGDVGRIISRKPKDVWAV 100 (121)
Q Consensus 47 ~~~~~IG~~Vrli~~ppYLKTAdpMPMLRPp~dLV~~gE~G~Iv~rrP~d~waV 100 (121)
++.+..||.|.+++-. .-|..|.|+..-|...|.+
T Consensus 13 km~IkkGD~V~Vi~Gk-------------------dKGk~GkV~~V~~~~~~V~ 47 (115)
T 2zjr_R 13 KLHFKKGDTVIVLSGK-------------------HKGQTGKVLLALPRDQKVV 47 (115)
T ss_dssp CCSSCTTSEEECCSSS-------------------STTCEEEEEEEETTTTEEE
T ss_pred eCcccCCCEEEEeEcC-------------------CCCcEEEEEEEECCCCEEE
Confidence 4578888888887643 2589999999988876653
No 170
>1t60_A Type IV collagen; basement membrane, NC1 domain, structural protein; 1.50A {Bos taurus} SCOP: d.169.1.6 d.169.1.6 PDB: 1m3d_A 1t61_A 1li1_A
Probab=22.02 E-value=21 Score=28.46 Aligned_cols=25 Identities=20% Similarity=0.302 Sum_probs=17.3
Q ss_pred ceecCCccccccCCCCccCCCCeeeEee
Q 033358 64 MIKTAASVPCLRANSGLVKPGDVGRIIS 91 (121)
Q Consensus 64 YLKTAdpMPMLRPp~dLV~~gE~G~Iv~ 91 (121)
+|-|++||||...| |+.+|+-.-|+
T Consensus 82 WLst~~~~p~~~~p---v~~~~i~~yIS 106 (229)
T 1t60_A 82 WLSTPEPMPMSMAP---ITGENIRPFIS 106 (229)
T ss_dssp EEBCSCCCCTTCCC---BCGGGGGGGBC
T ss_pred eecCCCCCCcccCC---CCHHHhHhhhc
Confidence 58899999998765 56566544333
No 171
>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}
Probab=21.82 E-value=1.3e+02 Score=17.50 Aligned_cols=25 Identities=16% Similarity=-0.000 Sum_probs=16.5
Q ss_pred CCCEEEEEEc--ceeEEeeCCccccCC
Q 033358 94 PKDVWAVRLS--IGTYLLEGKYFKPLE 118 (121)
Q Consensus 94 P~d~waVRF~--rGtFLid~~yl~~~~ 118 (121)
..|-|-.+.. .-.=++++.|+++++
T Consensus 40 ~~~Ww~g~~~~~g~~G~~P~~yv~~~~ 66 (67)
T 2kxc_A 40 KDGWLYGEHDVSKARGWFPSSYTKLLE 66 (67)
T ss_dssp BTTEEEEEESSSCCEEEEEGGGEEESC
T ss_pred CCCcEEEEECCCCCEEEEehHHeEECC
Confidence 4567777766 223466888888764
No 172
>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.23 E-value=1.5e+02 Score=17.91 Aligned_cols=61 Identities=16% Similarity=0.148 Sum_probs=38.5
Q ss_pred EEEecCCceecCC-ccccccCCCCc-cCCCCeeeEeee-cCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 57 IVIEAPKMIKTAA-SVPCLRANSGL-VKPGDVGRIISR-KPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 57 rli~~ppYLKTAd-pMPMLRPp~dL-V~~gE~G~Iv~r-rP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
.+++.-.|-.+.+ |.|. ++.+| ++.||+=+|+.. ...|.|..+...-.=++++.|++.+..
T Consensus 9 ~~~Alydy~~~~~~~~~~--~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~~g~~G~fP~~yv~~~~~ 72 (75)
T 2ege_A 9 IMIAALDYDPGDGQMGGQ--GKGRLALRAGDVVMVYGPMDDQGFYYGELGGHRGLVPAHLLDHMSL 72 (75)
T ss_dssp EEEESSCBCTTTTCCCSS--SCCBCCBCTTCEEEEESCCCTTCEEEEESSSCEEEEETTTEEECCC
T ss_pred EEEECCCCCCCccccCCC--CCCcceECCCCEEEEeEccCCCCEEEEEECCcEEEEChHHeEEccC
Confidence 4556667765553 3444 21233 455666666653 567888888855566889999998754
No 173
>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A
Probab=21.10 E-value=1.4e+02 Score=17.88 Aligned_cols=24 Identities=8% Similarity=0.135 Sum_probs=17.4
Q ss_pred CCEEEEEEcceeEEeeCCccccCC
Q 033358 95 KDVWAVRLSIGTYLLEGKYFKPLE 118 (121)
Q Consensus 95 ~d~waVRF~rGtFLid~~yl~~~~ 118 (121)
.+-|.++...-.=++++.|++.+.
T Consensus 43 ~~Ww~g~~~g~~G~~P~~yv~~~~ 66 (74)
T 1gbq_A 43 QNWYKAELNGKDGFIPKNYIEMKP 66 (74)
T ss_dssp SSEEEEEETTEEEEEEGGGEEEEC
T ss_pred CCEEEEEECCCEEEEehHhEEEcC
Confidence 467888875555688888888654
No 174
>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.00 E-value=1.5e+02 Score=17.92 Aligned_cols=65 Identities=9% Similarity=0.049 Sum_probs=41.6
Q ss_pred ccccccCCcEEEEecCCceecCCccccccCCCCc-cCCCCeeeEeeecCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 47 RSKLAIGSPVIVIEAPKMIKTAASVPCLRANSGL-VKPGDVGRIISRKPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 47 ~~~~~IG~~Vrli~~ppYLKTAdpMPMLRPp~dL-V~~gE~G~Iv~rrP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
-+.+..+.....++.-.|--+.+. +| ++.||+=.|+.....+.|.++...-.=++++.|++.++.
T Consensus 9 ~~~~~~~~~~~~~al~dy~~~~~~--------eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~ 74 (79)
T 1x69_A 9 YDEYENDLGITAVALYDYQAAGDD--------EISFDPDDIITNIEMIDDGWWRGVCKGRYGLFPANYVELRQS 74 (79)
T ss_dssp CCCCCCCCCCCEEESSCCCCSSSS--------BCCCCTTCEEEEEEECSSSEEEEEETTEEEEEETTSEEECCC
T ss_pred ccccCCCCCeEEEECccCCCCCCC--------CcCcCCCCEEEEeEecCCCeEEEEECCcEEEechHHEEECCC
Confidence 344444555556666667543221 22 345666667777678899999766666889999998753
No 175
>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.96 E-value=1.5e+02 Score=17.93 Aligned_cols=36 Identities=19% Similarity=0.176 Sum_probs=22.4
Q ss_pred CCeeeEeeec-CCCEEEEEEcce-eEEeeCCccccCCC
Q 033358 84 GDVGRIISRK-PKDVWAVRLSIG-TYLLEGKYFKPLEL 119 (121)
Q Consensus 84 gE~G~Iv~rr-P~d~waVRF~rG-tFLid~~yl~~~~~ 119 (121)
||+=.|+... ..+-|.+|...| .=++++.|++.++.
T Consensus 35 Gd~i~v~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~ 72 (78)
T 2dl5_A 35 HEVLEVIEDGDMEDWVKARNKVGQVGYVPEKYLQFPTS 72 (78)
T ss_dssp SEEEEEEECCSSSSEEEEECTTCCEEEEETTTSCCSCC
T ss_pred CCEEEEEeccCCCCcEEEEeCCCCEEEEEhHHEEECCC
Confidence 3333444443 367888887633 34778999988753
No 176
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=20.83 E-value=1e+02 Score=18.89 Aligned_cols=21 Identities=19% Similarity=0.445 Sum_probs=17.4
Q ss_pred eeecCCCEEEEEE----cceeEEee
Q 033358 90 ISRKPKDVWAVRL----SIGTYLLE 110 (121)
Q Consensus 90 v~rrP~d~waVRF----~rGtFLid 110 (121)
..+.|+..|.++| .-|+|..-
T Consensus 64 ~~i~pG~~~~~~f~~~~~~G~y~y~ 88 (105)
T 3cvb_A 64 LMFSPGESYEITFSSDFPAGTYTYY 88 (105)
T ss_dssp EECSTTCEEEEEECTTSCSEEEEEE
T ss_pred cccCCCCeEEEEEecCCCCeeEEEE
Confidence 5678999999999 57999763
No 177
>2bco_A Succinylglutamate desuccinylase; NESG, VPR14, structural genomics, PSI, protein structure initiative; 2.33A {Vibrio parahaemolyticus} SCOP: c.56.5.7 PDB: 2g9d_A
Probab=20.71 E-value=1.3e+02 Score=23.70 Aligned_cols=61 Identities=10% Similarity=0.074 Sum_probs=42.3
Q ss_pred ccccccCCcEEEEecCCceecCCccccccCCCCccCCCC-eeeEeeecCCCEEEEEEcceeEEeeCCc
Q 033358 47 RSKLAIGSPVIVIEAPKMIKTAASVPCLRANSGLVKPGD-VGRIISRKPKDVWAVRLSIGTYLLEGKY 113 (121)
Q Consensus 47 ~~~~~IG~~Vrli~~ppYLKTAdpMPMLRPp~dLV~~gE-~G~Iv~rrP~d~waVRF~rGtFLid~~y 113 (121)
-..++.|+.+-.+.--+|.=..|-.-..+|+ -+|..|+ ++.|+..... ||.+|...-|..+
T Consensus 284 g~~V~~G~~La~i~d~~v~a~~dG~~i~~p~-p~V~~G~~~~~i~~~~~~-----~~~~~~~~~~~~~ 345 (350)
T 2bco_A 284 FTSFVHGEVFGHDGDKPLMAKNDNEAIVFPN-RHVAIGQRAALMVCEVKT-----RFEEGELVYDLEH 345 (350)
T ss_dssp TEECCTTCEEEEETTEEEECSSSSCEEESCC-TTCCTTSEEEEEEEECCE-----EEETTEEEEC---
T ss_pred CCEeCCCCEEEEECCEEEEeCCCCEEEEecC-CCCCCCcEEEEEEEEccc-----hhccCceEeechh
Confidence 3567778888776665555455667677774 8899999 7887776633 9999998877543
No 178
>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.56 E-value=1.6e+02 Score=18.09 Aligned_cols=37 Identities=11% Similarity=0.178 Sum_probs=22.4
Q ss_pred CCCCeeeEeeecCCCEEEEEEcce-eEEeeCCccccCC
Q 033358 82 KPGDVGRIISRKPKDVWAVRLSIG-TYLLEGKYFKPLE 118 (121)
Q Consensus 82 ~~gE~G~Iv~rrP~d~waVRF~rG-tFLid~~yl~~~~ 118 (121)
+.||+=.|+.....|-|.+|-..| .=++++.|++++.
T Consensus 39 ~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~~P~~yv~~~~ 76 (85)
T 2yuq_A 39 RRNEEYCLLDSSEIHWWRVQDRNGHEGYVPSSYLVEKS 76 (85)
T ss_dssp CBTEEEEEEECCSSSEEEEECSSSCEEEEETTTCEECC
T ss_pred CCCCEEEEEEecCCCeEEEEECCCCEEEEehHHeEEcc
Confidence 334444455555567777764333 3577899998853
No 179
>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.43 E-value=1.5e+02 Score=17.80 Aligned_cols=61 Identities=8% Similarity=0.038 Sum_probs=34.8
Q ss_pred EEEecCCceecCC-ccccccCCCCc-cCCCCeeeEeeecC-CCEEEEEEcceeEEeeCCccccCCC
Q 033358 57 IVIEAPKMIKTAA-SVPCLRANSGL-VKPGDVGRIISRKP-KDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 57 rli~~ppYLKTAd-pMPMLRPp~dL-V~~gE~G~Iv~rrP-~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
+.++.-.|--..+ |.|. .+ .+| ++.||+=+|+.... .+-|..+...-.=++++.|++.++.
T Consensus 9 ~~~Al~dy~~~~~~~~~~-~~-~eLsf~~Gd~i~v~~~~~~~gWw~g~~~g~~G~~P~~yv~~~~~ 72 (76)
T 2csi_A 9 RMVALYDYDPRESSPNVD-VE-AELTFCTGDIITVFGEIDEDGFYYGELNGQKGLVPSNFLEEVSG 72 (76)
T ss_dssp EEECSSCCCTTTTSCSSS-TT-TSCCCCTTCEEEEESSCCSSSEEEEEETTEEEEEEGGGCCBCCC
T ss_pred EEEEcccCCCCCcccCCC-CC-CcccCCCCCEEEEeEecCCCCeEEEEECCcEEEEehHHEEECCC
Confidence 3445555544432 3343 12 122 34556555555433 3688888765556889999998753
No 180
>2dfu_A Probable 2-hydroxyhepta-2,4-diene-1,7-dioate ISOM; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase, structural GE NPPSFA; 2.20A {Thermus thermophilus}
Probab=20.16 E-value=50 Score=25.52 Aligned_cols=31 Identities=19% Similarity=0.179 Sum_probs=26.1
Q ss_pred cccCCCCccCCCCeeeEeeecCCCEEEEEEcc
Q 033358 73 CLRANSGLVKPGDVGRIISRKPKDVWAVRLSI 104 (121)
Q Consensus 73 MLRPp~dLV~~gE~G~Iv~rrP~d~waVRF~r 104 (121)
-|+|. |+|-.|=.+-+..++|||.+.+++..
T Consensus 218 tL~pG-DvI~TGTp~Gvg~l~~GD~v~~~i~g 248 (264)
T 2dfu_A 218 TLEPL-DVVLTGTPEGVGALRPGDRLEVAVEG 248 (264)
T ss_dssp CBCTT-CEEECCCCSCCCBCCTTCEEEEEETT
T ss_pred CcCCC-CEEEeCCCCCccccCCCCEEEEEEeC
Confidence 37885 99998887777889999999999864
No 181
>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens}
Probab=20.13 E-value=49 Score=21.46 Aligned_cols=27 Identities=19% Similarity=0.215 Sum_probs=17.5
Q ss_pred cCCCEEEEEEcceeEEeeCCccccCCC
Q 033358 93 KPKDVWAVRLSIGTYLLEGKYFKPLEL 119 (121)
Q Consensus 93 rP~d~waVRF~rGtFLid~~yl~~~~~ 119 (121)
...|.|..+...-.=++++.|++.++.
T Consensus 49 ~~~gWw~g~~~g~~G~fPsnyV~~~~~ 75 (92)
T 2o2o_A 49 VEEGWWEGVLNGKTGMFPSNFIKELSG 75 (92)
T ss_dssp GGSSCBCCEETTEECCBCSSSEECCSS
T ss_pred cCCCEEEEEECCeEEEeehHHEEECCC
Confidence 345666666644445678888887753
Done!