Query 033359
Match_columns 121
No_of_seqs 126 out of 1032
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 21:38:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033359.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033359hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpr_A Ubiquitin-conjugating e 100.0 1.1E-46 3.7E-51 255.1 14.9 118 1-120 34-151 (151)
2 3rcz_B SUMO-conjugating enzyme 100.0 3.1E-46 1E-50 255.6 14.9 119 1-119 45-163 (163)
3 2r0j_A Ubiquitin carrier prote 100.0 2.7E-46 9.3E-51 252.7 13.6 118 1-120 31-148 (149)
4 2ayv_A Ubiquitin-conjugating e 100.0 5.7E-46 2E-50 254.9 14.6 116 1-118 51-166 (166)
5 2c2v_B Ubiquitin-conjugating e 100.0 2.3E-46 7.9E-51 254.2 11.7 117 1-119 35-151 (154)
6 2gjd_A Ubiquitin-conjugating e 100.0 9.6E-46 3.3E-50 251.9 14.5 119 1-119 39-157 (157)
7 1z2u_A Ubiquitin-conjugating e 100.0 9.7E-46 3.3E-50 250.2 14.3 117 1-119 34-150 (150)
8 2c4o_A Ubiquitin-conjugating e 100.0 1.4E-45 4.6E-50 252.9 14.8 117 1-119 49-165 (165)
9 2aak_A UBC1, ubiquitin conjuga 100.0 1.5E-45 5E-50 249.8 14.5 117 1-119 34-150 (152)
10 1fxt_A Ubiquitin-conjugating e 100.0 3.9E-46 1.3E-50 251.9 11.6 117 1-119 32-149 (149)
11 1ayz_A UBC2, ubiquitin-conjuga 100.0 9.2E-46 3.1E-50 254.6 13.6 117 1-119 34-150 (169)
12 1yh2_A HSPC150 protein similar 100.0 2.1E-45 7.2E-50 252.8 14.9 120 1-120 34-155 (169)
13 1zdn_A Ubiquitin-conjugating e 100.0 7.1E-46 2.4E-50 252.8 12.4 116 1-118 43-158 (158)
14 3h8k_A Ubiquitin-conjugating e 100.0 1.6E-45 5.4E-50 252.4 13.9 119 1-119 34-163 (164)
15 2grr_A Ubiquitin-conjugating e 100.0 2.5E-45 8.4E-50 250.8 14.6 119 1-119 42-160 (161)
16 2ucz_A UBC7, ubiquitin conjuga 100.0 1.7E-45 5.9E-50 252.4 13.7 119 1-119 35-164 (165)
17 2bep_A Ubiquitin-conjugating e 100.0 3.3E-45 1.1E-49 249.7 14.7 117 1-119 41-158 (159)
18 1jat_A Ubiquitin-conjugating e 100.0 1.6E-45 5.6E-50 250.3 12.0 117 1-119 35-151 (155)
19 2e2c_A Ubiquitin conjugating e 100.0 3.5E-45 1.2E-49 248.9 13.2 116 1-119 39-154 (156)
20 2f4z_A Tgtwinscan_2721 - E2 do 100.0 7.2E-45 2.5E-49 254.5 14.3 117 1-119 75-192 (193)
21 3bzh_A Ubiquitin-conjugating e 100.0 1.9E-44 6.6E-49 252.6 14.8 117 1-119 78-194 (194)
22 3k9o_A Ubiquitin-conjugating e 100.0 2E-44 6.7E-49 254.0 14.2 118 1-120 38-156 (201)
23 2pwq_A Ubiquitin conjugating e 100.0 1.2E-44 4.1E-49 257.1 12.0 118 1-120 53-171 (216)
24 2onu_A Ubiquitin-conjugating e 100.0 1.1E-44 3.9E-49 245.4 10.5 118 1-120 29-148 (152)
25 1i7k_A Ubiquitin-conjugating e 100.0 4E-44 1.4E-48 248.2 13.4 116 1-119 60-175 (179)
26 3fn1_B NEDD8-conjugating enzym 100.0 7E-44 2.4E-48 244.8 14.1 118 1-119 45-167 (167)
27 1wzv_A Ubiquitin-conjugating e 100.0 4.9E-44 1.7E-48 243.0 13.2 116 1-119 35-151 (155)
28 1tte_A Ubiquitin-conjugating e 100.0 1.4E-44 4.9E-49 256.6 10.5 118 1-120 33-151 (215)
29 2z5d_A Ubiquitin-conjugating e 100.0 1.6E-44 5.4E-49 250.1 10.0 117 1-119 51-169 (179)
30 2y9m_A Ubiquitin-conjugating e 100.0 1.8E-43 6.1E-48 243.8 14.1 118 1-119 48-168 (172)
31 3e46_A Ubiquitin-conjugating e 100.0 2.8E-43 9.7E-48 254.9 14.2 118 1-120 90-208 (253)
32 1yf9_A Ubiquitin carrier prote 100.0 7.6E-44 2.6E-48 245.4 10.6 117 1-119 38-156 (171)
33 1c4z_D UBCH7, ubiquitin conjug 100.0 1.3E-43 4.4E-48 240.7 11.2 118 1-120 33-150 (154)
34 3rz3_A Ubiquitin-conjugating e 100.0 4.4E-43 1.5E-47 244.0 13.0 119 1-119 38-173 (183)
35 1y8x_A Ubiquitin-conjugating e 100.0 1.1E-42 3.7E-47 237.5 13.8 113 1-116 35-147 (160)
36 1yrv_A Ubiquitin-conjugating l 100.0 5.1E-43 1.7E-47 240.8 10.9 115 1-116 53-168 (169)
37 2awf_A Ubiquitin-conjugating e 100.0 5.3E-43 1.8E-47 241.4 10.2 113 1-113 48-172 (172)
38 2nvu_C NEDD8-conjugating enzym 100.0 2.1E-42 7.2E-47 239.9 12.8 114 1-117 55-168 (180)
39 3o2u_A NEDD8-conjugating enzym 100.0 2.5E-41 8.7E-46 236.2 12.9 113 2-117 65-177 (190)
40 4ddg_A Ubiquitin-conjugating e 100.0 4.1E-41 1.4E-45 257.5 14.2 118 1-120 33-150 (399)
41 4ds2_A Ubiquitin-conjugating e 100.0 5.9E-39 2E-43 220.3 10.4 110 1-112 50-164 (167)
42 3ceg_A Baculoviral IAP repeat- 100.0 3.2E-38 1.1E-42 234.5 10.0 119 1-119 110-243 (323)
43 2q0v_A Ubiquitin-conjugating e 100.0 2.8E-38 9.5E-43 214.7 5.4 99 1-102 55-156 (156)
44 2a4d_A Ubiquitin-conjugating e 100.0 1.5E-36 5.1E-41 206.8 7.9 96 1-96 59-156 (160)
45 1jat_B Ubiquitin-conjugating e 100.0 2.8E-37 9.4E-42 206.2 2.5 96 1-99 40-138 (138)
46 2fo3_A Ubiquitin-conjugating e 100.0 1.6E-35 5.4E-40 194.7 9.8 87 1-89 36-123 (125)
47 2hlw_A Ubiquitin-conjugating e 100.0 3.5E-36 1.2E-40 206.8 5.5 96 1-96 69-166 (170)
48 2h2y_A Ubiquitin-conjugating e 100.0 8.4E-35 2.9E-39 193.7 10.4 85 1-87 50-135 (136)
49 2a7l_A Hypothetical ubiquitin- 100.0 7.8E-34 2.7E-38 188.9 9.2 81 1-83 54-136 (136)
50 2f4w_A Ubiquitin-conjugating e 100.0 1.2E-31 4.1E-36 186.8 11.6 87 1-89 44-131 (187)
51 1zuo_A Hypothetical protein LO 100.0 1E-33 3.4E-38 197.1 -0.8 108 1-117 60-180 (186)
52 2z6o_A UFM1-conjugating enzyme 99.9 1.9E-24 6.5E-29 146.2 2.9 76 1-76 56-144 (172)
53 3r3q_A Suppressor protein STP2 99.8 2.3E-20 7.9E-25 126.8 6.9 84 3-89 63-161 (162)
54 3kpa_A Probable ubiquitin fold 99.7 1.9E-17 6.4E-22 110.0 2.2 62 2-68 59-131 (168)
55 3obq_A Tumor susceptibility ge 99.6 7.7E-16 2.6E-20 102.9 5.8 75 1-83 54-137 (146)
56 2ebm_A RWD domain-containing p 95.7 0.029 9.8E-07 35.6 5.8 24 17-40 54-77 (128)
57 2daw_A RWD domain containing p 94.6 0.19 6.4E-06 33.1 7.4 23 19-41 76-98 (154)
58 2day_A Ring finger protein 25; 94.1 0.18 6.3E-06 31.8 6.2 24 18-41 59-82 (128)
59 2yz0_A Serine/threonine-protei 93.3 0.17 6E-06 32.3 5.2 24 18-41 62-85 (138)
60 2ebk_A RWD domain-containing p 93.1 0.27 9.2E-06 31.1 5.7 23 18-40 56-78 (128)
61 3zqs_A E3 ubiquitin-protein li 92.5 0.41 1.4E-05 32.7 6.3 51 17-83 37-87 (186)
62 2dax_A Protein C21ORF6; RWD do 91.6 0.56 1.9E-05 30.5 6.0 23 19-41 74-96 (152)
63 1ukx_A GCN2, GCN2 EIF2alpha ki 91.2 0.12 4.3E-06 32.9 2.4 23 18-40 63-85 (137)
64 2cwb_A Chimera of immunoglobul 89.8 0.061 2.1E-06 33.7 0.0 32 87-118 23-54 (108)
65 3r45_C Holliday junction recog 39.0 46 0.0016 19.1 3.6 29 92-120 16-44 (81)
66 2bum_A Protocatechuate 3,4-dio 36.4 26 0.0009 24.0 2.8 24 16-39 109-137 (209)
67 1zoq_C CREB-binding protein, i 36.1 28 0.00096 18.0 2.2 42 76-119 4-46 (47)
68 4g2e_A Peroxiredoxin; redox pr 31.2 41 0.0014 21.0 3.0 33 47-81 124-156 (157)
69 2f4m_B UV excision repair prot 31.0 54 0.0019 17.9 3.0 20 91-110 37-56 (61)
70 1pve_A HHR23B, UV excision rep 30.9 42 0.0014 19.1 2.6 21 91-111 39-59 (72)
71 1h3o_B Transcription initiatio 30.3 53 0.0018 18.8 3.0 42 77-118 10-51 (76)
72 2yzh_A Probable thiol peroxida 30.1 32 0.0011 21.6 2.3 34 47-82 138-171 (171)
73 2cu9_A Spcia1, histone chapero 29.2 71 0.0024 21.1 3.8 36 1-36 38-86 (161)
74 4gqc_A Thiol peroxidase, perox 29.1 59 0.002 20.5 3.5 34 47-82 126-159 (164)
75 1roc_A Anti-silencing protein 28.9 78 0.0027 20.7 4.0 35 1-35 39-86 (155)
76 2i32_A Anti-silencing factor 1 25.3 93 0.0032 20.9 3.9 35 1-35 63-110 (182)
77 2jsy_A Probable thiol peroxida 24.9 55 0.0019 20.3 2.7 34 47-82 133-166 (167)
78 2hue_A Anti-silencing protein 23.3 1.1E+02 0.0037 20.5 3.9 35 1-35 44-91 (175)
79 1f53_A Yeast killer toxin-like 23.1 29 0.00099 20.1 0.9 11 29-39 70-80 (84)
80 2idc_A Anti-silencing protein 22.5 1.2E+02 0.004 20.4 4.0 33 1-33 40-85 (179)
81 2l3o_A Interleukin 3; cytokine 22.3 87 0.003 19.7 3.1 48 65-116 61-108 (127)
82 2fkn_A Urocanate hydratase; ro 21.8 94 0.0032 24.5 3.8 26 92-117 277-302 (552)
83 1x87_A Urocanase protein; stru 21.6 96 0.0033 24.4 3.8 26 92-117 276-301 (551)
84 2k6w_A Putative uncharacterize 21.6 96 0.0033 19.1 3.3 26 3-28 82-107 (120)
85 1uwk_A Urocanate hydratase; hy 21.3 97 0.0033 24.4 3.8 26 92-117 281-306 (557)
86 3rls_A YAF9, protein AF-9 homo 21.0 1.9E+02 0.0065 19.2 4.8 39 2-42 34-72 (175)
87 2bum_B Protocatechuate 3,4-dio 20.1 42 0.0014 23.6 1.5 25 16-40 134-165 (241)
No 1
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=1.1e-46 Score=255.11 Aligned_cols=118 Identities=31% Similarity=0.730 Sum_probs=115.8
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCceeecCCCCCCCCCCcccHHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQD 80 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~ic~~~l~~~~~W~p~~~i~~il~~i~~ 80 (121)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.. +|+|+++|.+||.+|++
T Consensus 34 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~iL~~--~W~p~~~i~~vl~~i~~ 111 (151)
T 4gpr_A 34 FHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNINKNGVICLDILKD--QWSPALTLSRVLLSISS 111 (151)
T ss_dssp TEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGGTT--TCCTTCCHHHHHHHHHH
T ss_pred eEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceECCCCEEEcccccC--CCCCCCcHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999999999987 89999999999999999
Q ss_pred hhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcCCC
Q 033359 81 LLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPPV 120 (121)
Q Consensus 81 ~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~~~ 120 (121)
+|.+|++++|+|.+|+++|++|+++|.++||+|+++||.|
T Consensus 112 ll~~p~~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~ya~p 151 (151)
T 4gpr_A 112 LLTDPNPSDPLDPEVANVLRANKKQFEDTAREWTRMYARP 151 (151)
T ss_dssp HHHCCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCCC
T ss_pred HhcCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999976
No 2
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=3.1e-46 Score=255.63 Aligned_cols=119 Identities=63% Similarity=1.208 Sum_probs=115.8
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCceeecCCCCCCCCCCcccHHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQD 80 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~ic~~~l~~~~~W~p~~~i~~il~~i~~ 80 (121)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|...++|+|+++|++||.+|++
T Consensus 45 ~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i~HPnV~~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ 124 (163)
T 3rcz_B 45 MNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQD 124 (163)
T ss_dssp EEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHH
T ss_pred cEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCCccCCCCCCCcEeccccCCCCCcCCcCcHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999885569999999999999999
Q ss_pred hhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcCC
Q 033359 81 LLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPP 119 (121)
Q Consensus 81 ~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~~ 119 (121)
+|.+|++++|+|.+|+.+|++|+++|.++||+|++|||+
T Consensus 125 ll~~P~~~~p~n~~aa~~~~~d~~~y~~~~r~~~~~ya~ 163 (163)
T 3rcz_B 125 LLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENAP 163 (163)
T ss_dssp HHTSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC
T ss_pred HHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhCc
Confidence 999999999999999999999999999999999999986
No 3
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=2.7e-46 Score=252.67 Aligned_cols=118 Identities=36% Similarity=0.745 Sum_probs=115.2
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCceeecCCCCCCCCCCcccHHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQD 80 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~ic~~~l~~~~~W~p~~~i~~il~~i~~ 80 (121)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.+ +|+|+++|.+||.+|++
T Consensus 31 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~--~W~p~~~i~~vl~~i~~ 108 (149)
T 2r0j_A 31 RHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKLGRICLDILKD--KWSPALQIRTVLLSIQA 108 (149)
T ss_dssp EEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCBBCCGGGTT--TCCTTSCHHHHHHHHHH
T ss_pred cEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCCCEEechhcCC--CCCCCCcHHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999987 89999999999999999
Q ss_pred hhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcCCC
Q 033359 81 LLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPPV 120 (121)
Q Consensus 81 ~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~~~ 120 (121)
+|.+|++++|+|.+|+.+|++|+++|.++||+|+++||..
T Consensus 109 ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 148 (149)
T 2r0j_A 109 LLSSPEPDDPLDSKVAEHFKQDKNDAEHVARQWNKIYANN 148 (149)
T ss_dssp HHHSCCTTSCSSCHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred HHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHccC
Confidence 9999999999999999999999999999999999999964
No 4
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=5.7e-46 Score=254.94 Aligned_cols=116 Identities=36% Similarity=0.813 Sum_probs=114.1
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCceeecCCCCCCCCCCcccHHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQD 80 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~ic~~~l~~~~~W~p~~~i~~il~~i~~ 80 (121)
++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.+ +|+|+++|.+||.+|++
T Consensus 51 ~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~G~ICL~iL~~--~WsP~~ti~~vL~sI~s 128 (166)
T 2ayv_A 51 FHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNINSQGAICLDILKD--QWSPALTISKVLLSISS 128 (166)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCTTCBBCCGGGTT--TCCTTCCHHHHHHHHHH
T ss_pred ceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcCCCCCeEEcccccc--cCCCCCcHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999999999997 89999999999999999
Q ss_pred hhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcC
Q 033359 81 LLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYP 118 (121)
Q Consensus 81 ~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~ 118 (121)
+|.+|++++|+|.+|+++|++|+++|.++||+|+++||
T Consensus 129 ll~~pn~~~Pln~~aa~l~~~d~~~f~~~ar~~~~~~A 166 (166)
T 2ayv_A 129 LLTDPNPDDPLVPEIAHLYKSDRMRYDQTAREWSQKYA 166 (166)
T ss_dssp HHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred HHhCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999997
No 5
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.3e-46 Score=254.24 Aligned_cols=117 Identities=34% Similarity=0.710 Sum_probs=112.7
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCceeecCCCCCCCCCCcccHHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQD 80 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~ic~~~l~~~~~W~p~~~i~~il~~i~~ 80 (121)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.. +|+|+++|.+||.+|++
T Consensus 35 ~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~--~W~p~~~i~~vl~~i~~ 112 (154)
T 2c2v_B 35 RYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKD--KWSPALQIRTVLLSIQA 112 (154)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTCBBCCHHHHT--SCCTTCCHHHHHHHHHH
T ss_pred heEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcCccCCeEEchhccC--CCCCCCcHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999999999987 89999999999999999
Q ss_pred hhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcCC
Q 033359 81 LLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPP 119 (121)
Q Consensus 81 ~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~~ 119 (121)
+|.+|++++|+|.+|+++|++|+++|.++||+|+++||.
T Consensus 113 ll~~pn~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~~a~ 151 (154)
T 2c2v_B 113 LLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 151 (154)
T ss_dssp HTTSCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999995
No 6
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=9.6e-46 Score=251.90 Aligned_cols=119 Identities=61% Similarity=1.182 Sum_probs=115.5
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCceeecCCCCCCCCCCcccHHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQD 80 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~ic~~~l~~~~~W~p~~~i~~il~~i~~ 80 (121)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|...++|+|+++|.+||.+|++
T Consensus 39 ~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ 118 (157)
T 2gjd_A 39 QKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFYHPNVYPSGTICLSILNEDQDWRPAITLKQIVLGVQD 118 (157)
T ss_dssp EEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTTCCCTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHH
T ss_pred cEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCCCccCCCCCCCcEeeecccCCCCCCCCCcHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999885579999999999999999
Q ss_pred hhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcCC
Q 033359 81 LLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPP 119 (121)
Q Consensus 81 ~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~~ 119 (121)
+|.+|+.++|+|.+|+.+|++|+++|.++||+|+++||.
T Consensus 119 ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 157 (157)
T 2gjd_A 119 LLDSPNPNSPAQEPAWRSFSRNKAEYDKKVLLQAKQYSK 157 (157)
T ss_dssp HHTSCCTTCCCCHHHHHHHHHCHHHHHHHHHHHHHHTBC
T ss_pred HHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999984
No 7
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=9.7e-46 Score=250.20 Aligned_cols=117 Identities=36% Similarity=0.775 Sum_probs=114.5
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCceeecCCCCCCCCCCcccHHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQD 80 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~ic~~~l~~~~~W~p~~~i~~il~~i~~ 80 (121)
++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.+ +|+|+++|.+||.+|++
T Consensus 34 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~--~W~p~~~i~~vl~~i~~ 111 (150)
T 1z2u_A 34 FHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRS--QWSPALTISKVLLSICS 111 (150)
T ss_dssp EEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGGTT--TCCTTCCHHHHHHHHHH
T ss_pred eEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcCCCCCeEeeccccC--CCCCCCCHHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999987 89999999999999999
Q ss_pred hhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcCC
Q 033359 81 LLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPP 119 (121)
Q Consensus 81 ~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~~ 119 (121)
+|.+|++++|+|.+|+++|++|+++|.++||+|+++||.
T Consensus 112 ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 150 (150)
T 1z2u_A 112 LLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYAM 150 (150)
T ss_dssp HHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred HhhCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999984
No 8
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=1.4e-45 Score=252.89 Aligned_cols=117 Identities=37% Similarity=0.790 Sum_probs=114.6
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCceeecCCCCCCCCCCcccHHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQD 80 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~ic~~~l~~~~~W~p~~~i~~il~~i~~ 80 (121)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.+ +|+|+++|.+||.+|++
T Consensus 49 ~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~~~G~ICl~iL~~--~W~P~~ti~~vL~si~~ 126 (165)
T 2c4o_A 49 FHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRS--QWSPALTISKVLLSICS 126 (165)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCTTCBBCCGGGTT--TCCTTCCHHHHHHHHHH
T ss_pred ceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcCCCCCeEeehhhcC--CCCCcCcHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999999999997 89999999999999999
Q ss_pred hhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcCC
Q 033359 81 LLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPP 119 (121)
Q Consensus 81 ~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~~ 119 (121)
+|.+|++++|+|.+|+.+|++|+++|+++||+|+++||.
T Consensus 127 ll~~pn~~~P~n~~aa~~~~~d~~~y~~~ar~~~~~~a~ 165 (165)
T 2c4o_A 127 LLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 165 (165)
T ss_dssp HHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHTTC
T ss_pred HHhCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999984
No 9
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=1.5e-45 Score=249.82 Aligned_cols=117 Identities=44% Similarity=0.913 Sum_probs=114.7
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCceeecCCCCCCCCCCcccHHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQD 80 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~ic~~~l~~~~~W~p~~~i~~il~~i~~ 80 (121)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.. +|+|+++|.+||.+|++
T Consensus 34 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~--~W~p~~~i~~vl~~i~~ 111 (152)
T 2aak_A 34 MLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN--QWSPIYDVAAILTSIQS 111 (152)
T ss_dssp EEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCCGGGTT--SCCTTCCHHHHHHHHHH
T ss_pred cEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCCCCCCCEEechhhcC--CCCCCCcHHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999987 89999999999999999
Q ss_pred hhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcCC
Q 033359 81 LLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPP 119 (121)
Q Consensus 81 ~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~~ 119 (121)
+|.+|++++|+|.+|+++|++|+++|.++||+|+++||.
T Consensus 112 ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 150 (152)
T 2aak_A 112 LLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWT 150 (152)
T ss_dssp HHTSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred HHhCCCCCccccHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 999999999999999999999999999999999999986
No 10
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=3.9e-46 Score=251.90 Aligned_cols=117 Identities=32% Similarity=0.701 Sum_probs=114.4
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeC-CCceeecCCCCCCCCCCcccHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYP-SGTVCLSILNEDNGWRPAITVKQILVGIQ 79 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~-~G~ic~~~l~~~~~W~p~~~i~~il~~i~ 79 (121)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|++|||||+. +|+||+++|.. +|+|+++|.+||.+|+
T Consensus 32 ~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~~~G~iCl~iL~~--~W~p~~~i~~vl~~i~ 109 (149)
T 1fxt_A 32 HHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDILKN--AWSPVITLKSALISLQ 109 (149)
T ss_dssp SEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCSSSCCBCCHHHHT--SCCTTCCHHHHHHHHH
T ss_pred eEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcCCCCeEeCCcCCC--CCCCCCcHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999998 99999999987 8999999999999999
Q ss_pred HhhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcCC
Q 033359 80 DLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPP 119 (121)
Q Consensus 80 ~~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~~ 119 (121)
++|.+|++++|+|.+|+++|++|+++|.++||+|+++||.
T Consensus 110 ~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~a~~~~~~~a~ 149 (149)
T 1fxt_A 110 ALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYAS 149 (149)
T ss_dssp HHHHSCCSSSCSSHHHHHHHHHCSSHHHHHHHHHHHHHCC
T ss_pred HHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999984
No 11
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=9.2e-46 Score=254.56 Aligned_cols=117 Identities=42% Similarity=0.852 Sum_probs=114.4
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCceeecCCCCCCCCCCcccHHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQD 80 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~ic~~~l~~~~~W~p~~~i~~il~~i~~ 80 (121)
++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.. +|+|+++|.+||.+|++
T Consensus 34 ~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNI~~~G~ICl~iL~~--~WsP~~~i~~vL~si~~ 111 (169)
T 1ayz_A 34 MVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQN--RWTPTYDVASILTSIQS 111 (169)
T ss_dssp EEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCCGGGTT--TCCTTCCHHHHHHHHHH
T ss_pred ccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCCCCCCCeEeehhhcc--CCCCcCcHHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999987 89999999999999999
Q ss_pred hhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcCC
Q 033359 81 LLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPP 119 (121)
Q Consensus 81 ~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~~ 119 (121)
+|.+|++++|+|.+|+.+|++|+++|.++||+|+++||.
T Consensus 112 ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~~r~~~~~~a~ 150 (169)
T 1ayz_A 112 LFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWE 150 (169)
T ss_dssp HHTCCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCCcHHHHHHHHHHHHCHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999974
No 12
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.1e-45 Score=252.85 Aligned_cols=120 Identities=30% Similarity=0.598 Sum_probs=115.1
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCceeecCCCC--CCCCCCcccHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNE--DNGWRPAITVKQILVGI 78 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~ic~~~l~~--~~~W~p~~~i~~il~~i 78 (121)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.. .++|+|+++|.+||.+|
T Consensus 34 ~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si 113 (169)
T 1yh2_A 34 DDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSI 113 (169)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGGSCTTTSCCCTTSCHHHHHHHH
T ss_pred heEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccCCcCCeEecccccCCcccCCCCCCcHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999999999982 12899999999999999
Q ss_pred HHhhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcCCC
Q 033359 79 QDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPPV 120 (121)
Q Consensus 79 ~~~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~~~ 120 (121)
+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||..
T Consensus 114 ~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~ 155 (169)
T 1yh2_A 114 QLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHARQ 155 (169)
T ss_dssp HHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred HHHHhCCCCcchHhHHHHHHHHhhHHHHHHHHHHHHHHHccc
Confidence 999999999999999999999999999999999999999963
No 13
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=7.1e-46 Score=252.76 Aligned_cols=116 Identities=30% Similarity=0.642 Sum_probs=114.0
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCceeecCCCCCCCCCCcccHHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQD 80 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~ic~~~l~~~~~W~p~~~i~~il~~i~~ 80 (121)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.+ +|+|+++|.+||.+|++
T Consensus 43 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~--~W~p~~~i~~vL~~i~~ 120 (158)
T 1zdn_A 43 TDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKR--DWTAELGIRHVLLTIKC 120 (158)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCHHHHTT--TCCTTCCHHHHHHHHHH
T ss_pred hheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCCCCCCEEehhhcCC--CCCCCCcHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999999999987 89999999999999999
Q ss_pred hhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcC
Q 033359 81 LLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYP 118 (121)
Q Consensus 81 ~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~ 118 (121)
+|.+|++++|+|.+|+++|++|+++|.++||+|+++||
T Consensus 121 ll~~pn~~~p~n~~aa~~~~~d~~~f~~~a~~~t~~~A 158 (158)
T 1zdn_A 121 LLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIHG 158 (158)
T ss_dssp HHHSCCGGGCSSHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred HHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999997
No 14
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=1.6e-45 Score=252.36 Aligned_cols=119 Identities=35% Similarity=0.718 Sum_probs=114.4
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCceeecCCCC-----------CCCCCCcc
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNE-----------DNGWRPAI 69 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~ic~~~l~~-----------~~~W~p~~ 69 (121)
++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.. .++|+|++
T Consensus 34 ~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ 113 (164)
T 3h8k_A 34 FEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQ 113 (164)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTC
T ss_pred cEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCCCCCCcEeeecccCcccccccccccccCCCCCC
Confidence 5899999999999999999999999999999999999999999999999999999999972 13899999
Q ss_pred cHHHHHHHHHHhhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcCC
Q 033359 70 TVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPP 119 (121)
Q Consensus 70 ~i~~il~~i~~~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~~ 119 (121)
+|++||.+|+++|.+|++++|+|.+|+.+|++|+++|+++||+|++|+++
T Consensus 114 ti~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~s~~ 163 (164)
T 3h8k_A 114 SVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKSLG 163 (164)
T ss_dssp CHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999875
No 15
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=2.5e-45 Score=250.77 Aligned_cols=119 Identities=64% Similarity=1.250 Sum_probs=115.5
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCceeecCCCCCCCCCCcccHHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQD 80 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~ic~~~l~~~~~W~p~~~i~~il~~i~~ 80 (121)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|...++|+|+++|.+||.+|++
T Consensus 42 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ 121 (161)
T 2grr_A 42 MNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQE 121 (161)
T ss_dssp EEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHH
T ss_pred cEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecCcccCCCCCCCeEeehhcCCCCCcCCCCcHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999874579999999999999999
Q ss_pred hhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcCC
Q 033359 81 LLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPP 119 (121)
Q Consensus 81 ~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~~ 119 (121)
+|.+|+.++|+|.+|+.+|++|+++|.++||+|+++||.
T Consensus 122 ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 160 (161)
T 2grr_A 122 LLNEPNIQSPAQAEAYTIYCQNRVEYEKRVRAQAKKFAP 160 (161)
T ss_dssp HHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC
T ss_pred HHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999985
No 16
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.7e-45 Score=252.41 Aligned_cols=119 Identities=35% Similarity=0.777 Sum_probs=114.1
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCceeecCCCC-----------CCCCCCcc
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNE-----------DNGWRPAI 69 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~ic~~~l~~-----------~~~W~p~~ 69 (121)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.. .++|+|++
T Consensus 35 ~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ 114 (165)
T 2ucz_A 35 FIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQ 114 (165)
T ss_dssp SEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCTTBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTC
T ss_pred cEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccCCCCCCCcEeehhhCCccccccccCCCCCCCCCcC
Confidence 5899999999999999999999999999999999999999999999999999999999941 24899999
Q ss_pred cHHHHHHHHHHhhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcCC
Q 033359 70 TVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPP 119 (121)
Q Consensus 70 ~i~~il~~i~~~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~~ 119 (121)
+|.+||.+|+++|.+|+.++|+|.+|+++|++|+++|.++||+|+++|++
T Consensus 115 ~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~y~~~v~~~~~~~~~ 164 (165)
T 2ucz_A 115 SVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQVKLSILKSLG 164 (165)
T ss_dssp CHHHHHHHHHHHHHSCCGGGCCCHHHHHHHHTTHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999975
No 17
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=3.3e-45 Score=249.70 Aligned_cols=117 Identities=32% Similarity=0.654 Sum_probs=114.3
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeC-CCceeecCCCCCCCCCCcccHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYP-SGTVCLSILNEDNGWRPAITVKQILVGIQ 79 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~-~G~ic~~~l~~~~~W~p~~~i~~il~~i~ 79 (121)
++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+. +|+||+++|.. +|+|+++|.+||.+|+
T Consensus 41 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~~~G~iCl~iL~~--~W~p~~~i~~vl~~i~ 118 (159)
T 2bep_A 41 TELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKD--QWAAAMTLRTVLLSLQ 118 (159)
T ss_dssp SEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCGGGTT--TCCTTCCHHHHHHHHH
T ss_pred heEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCCccCCCCCCCEEeChhhhc--cCCCCCcHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999994 99999999987 8999999999999999
Q ss_pred HhhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcCC
Q 033359 80 DLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPP 119 (121)
Q Consensus 80 ~~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~~ 119 (121)
++|.+|++++|+|.+|+++|++|+++|.++||+|+++||.
T Consensus 119 ~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~ 158 (159)
T 2bep_A 119 ALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAG 158 (159)
T ss_dssp HHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred HHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999986
No 18
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=1.6e-45 Score=250.28 Aligned_cols=117 Identities=34% Similarity=0.723 Sum_probs=114.6
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCceeecCCCCCCCCCCcccHHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQD 80 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~ic~~~l~~~~~W~p~~~i~~il~~i~~ 80 (121)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.+ +|+|+++|.+||.+|++
T Consensus 35 ~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~--~W~p~~~i~~vl~~i~~ 112 (155)
T 1jat_A 35 RYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVLKT--NWSPALQIRTVLLSIQA 112 (155)
T ss_dssp EEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCCBCCGGGTT--TCCTTCCHHHHHHHHHH
T ss_pred hEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCCCCCEEEchhhcc--CCCCCCCHHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999987 89999999999999999
Q ss_pred hhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcCC
Q 033359 81 LLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPP 119 (121)
Q Consensus 81 ~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~~ 119 (121)
+|.+|++++|+|.+|+++|++|+++|.++||+|+++||.
T Consensus 113 ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~r~~~~~~a~ 151 (155)
T 1jat_A 113 LLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYAK 151 (155)
T ss_dssp HHHSCCTTSTTCCTTHHHHHHCHHHHHHHHHHHHHHHSE
T ss_pred HHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999985
No 19
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=3.5e-45 Score=248.91 Aligned_cols=116 Identities=36% Similarity=0.700 Sum_probs=113.4
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCceeecCCCCCCCCCCcccHHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQD 80 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~ic~~~l~~~~~W~p~~~i~~il~~i~~ 80 (121)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.+ +|+|+++|.+||.+|++
T Consensus 39 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~--~W~p~~~i~~vL~si~~ 116 (156)
T 2e2c_A 39 FKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKE--NWTASYDVRTILLSLQS 116 (156)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGGTT--TCCTTCCHHHHHHHHHH
T ss_pred cEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCCccCceEECccccc--cCCCCCcHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999999999987 89999999999999999
Q ss_pred hhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcCC
Q 033359 81 LLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPP 119 (121)
Q Consensus 81 ~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~~ 119 (121)
+|.+|++++|+|.+|+++| +|+++|+++||+|+++|++
T Consensus 117 ll~~pn~~~p~n~~aa~~~-~d~~~y~~~~~~~~~~~~~ 154 (156)
T 2e2c_A 117 LLGEPNNASPLNAQAADMW-SNQTEYKKVLHEKYKTAQS 154 (156)
T ss_dssp HTTSCCCSSCSCHHHHHHT-TCHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCCCHHHHHHHHHh-cCHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999 8999999999999999975
No 20
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=7.2e-45 Score=254.49 Aligned_cols=117 Identities=33% Similarity=0.745 Sum_probs=114.3
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceee-CCCceeecCCCCCCCCCCcccHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVY-PSGTVCLSILNEDNGWRPAITVKQILVGIQ 79 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~-~~G~ic~~~l~~~~~W~p~~~i~~il~~i~ 79 (121)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|++|||||+ .+|+||+++|.. +|+|+++|.+||.+|+
T Consensus 75 ~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~--~WsP~~ti~~vL~sI~ 152 (193)
T 2f4z_A 75 HRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPKMKFVTKIWHPNISSQTGAICLDILKH--EWSPALTIRTALLSIQ 152 (193)
T ss_dssp EEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCCGGGTT--TCCTTSCHHHHHHHHH
T ss_pred ceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCeEEEecCCccCCCcCCCCEEECccccc--cCCCCCCHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999 599999999988 8999999999999999
Q ss_pred HhhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcCC
Q 033359 80 DLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPP 119 (121)
Q Consensus 80 ~~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~~ 119 (121)
++|.+|++++|+|.+|+++|++|+++|.++||+|+++||.
T Consensus 153 sll~~pnp~~P~n~~aa~l~~~d~~~f~~~ar~~t~~ya~ 192 (193)
T 2f4z_A 153 AMLADPVPTDPQDAEVAKMMIENHPLFVQTAKLWTETFAK 192 (193)
T ss_dssp HHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred HHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 9999999999999999999999999999999999999986
No 21
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=1.9e-44 Score=252.56 Aligned_cols=117 Identities=38% Similarity=0.727 Sum_probs=114.6
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCceeecCCCCCCCCCCcccHHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQD 80 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~ic~~~l~~~~~W~p~~~i~~il~~i~~ 80 (121)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.. +|+|+++|.+||.+|++
T Consensus 78 ~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~G~ICL~iL~~--~WsP~~ti~~vL~sI~~ 155 (194)
T 3bzh_A 78 YEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKD--NWSPALTISKVLLSICS 155 (194)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTCBBCCGGGTT--TCCTTCCHHHHHHHHHH
T ss_pred ccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceECCCCceechhhhc--cCCCcCcHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999999999987 89999999999999999
Q ss_pred hhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcCC
Q 033359 81 LLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPP 119 (121)
Q Consensus 81 ~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~~ 119 (121)
+|.+|++++|+|.+|+.+|++|+++|.++||+|+++||.
T Consensus 156 ll~~pnp~~Pln~~aa~l~~~d~~~f~~~ar~~t~~ya~ 194 (194)
T 3bzh_A 156 LLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT 194 (194)
T ss_dssp HHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred HHhCCCCccchhHHHHHHHHHCHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999984
No 22
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=2e-44 Score=253.99 Aligned_cols=118 Identities=32% Similarity=0.649 Sum_probs=114.7
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeC-CCceeecCCCCCCCCCCcccHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYP-SGTVCLSILNEDNGWRPAITVKQILVGIQ 79 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~-~G~ic~~~l~~~~~W~p~~~i~~il~~i~ 79 (121)
++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+. +|+||+++|.. +|+|+++|.+||.+|+
T Consensus 38 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~~G~iCl~iL~~--~W~p~~~i~~vL~~i~ 115 (201)
T 3k9o_A 38 TELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKD--QWAAAMTLRTVLLSLQ 115 (201)
T ss_dssp SEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCCGGGTT--TCCTTCCHHHHHHHHH
T ss_pred cEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcccCCCcCCCCeeeCccccc--CCCCCCCHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999995 99999999987 8999999999999999
Q ss_pred HhhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcCCC
Q 033359 80 DLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPPV 120 (121)
Q Consensus 80 ~~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~~~ 120 (121)
++|.+|++++|+|.+|+++|++|+++|.++||+|+++||..
T Consensus 116 ~ll~~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 156 (201)
T 3k9o_A 116 ALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 156 (201)
T ss_dssp HHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred HHhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999863
No 23
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=1.2e-44 Score=257.13 Aligned_cols=118 Identities=34% Similarity=0.745 Sum_probs=114.7
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceee-CCCceeecCCCCCCCCCCcccHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVY-PSGTVCLSILNEDNGWRPAITVKQILVGIQ 79 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~-~~G~ic~~~l~~~~~W~p~~~i~~il~~i~ 79 (121)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|++|||||+ .+|+||+++|.. +|+|+++|.+||.+|+
T Consensus 53 ~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~--~WsP~~ti~~VL~sI~ 130 (216)
T 2pwq_A 53 FEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNISSQTGAICLDVLKN--EWSPALTIRTALLSIQ 130 (216)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCHHHHH--HCCTTCCHHHHHHHHH
T ss_pred ceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCCcCCCCEEEchhhcc--cCCCCCcHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999 589999999987 7999999999999999
Q ss_pred HhhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcCCC
Q 033359 80 DLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPPV 120 (121)
Q Consensus 80 ~~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~~~ 120 (121)
++|.+|++++|+|.+|+++|++|+++|.++||+|+++||..
T Consensus 131 sLL~~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t~~ya~~ 171 (216)
T 2pwq_A 131 ALLSDPQPDDPQDAEVAKMYKENHALFVKTASVWTKTFATG 171 (216)
T ss_dssp HHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred HHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999963
No 24
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=1.1e-44 Score=245.39 Aligned_cols=118 Identities=31% Similarity=0.688 Sum_probs=113.8
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeC-CCceeecCCCCCCCCCCcccHHHHHHH-H
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYP-SGTVCLSILNEDNGWRPAITVKQILVG-I 78 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~-~G~ic~~~l~~~~~W~p~~~i~~il~~-i 78 (121)
++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+. +|+||+++|.. +|+|+++|.+||.+ |
T Consensus 29 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~~~G~iCl~il~~--~W~p~~~i~~vl~~ii 106 (152)
T 2onu_A 29 QDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDEASGSVCLDVINQ--TWTPLYSLVNVFEVFL 106 (152)
T ss_dssp EEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTTCBBCHHHHHH--HCCTTCCHHHHHHTHH
T ss_pred ceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcCcCCeEecccccc--cCCCCCCHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999995 99999999987 89999999999999 6
Q ss_pred HHhhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcCCC
Q 033359 79 QDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPPV 120 (121)
Q Consensus 79 ~~~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~~~ 120 (121)
++||.+|++++|+|.+|+++|++|+++|+++||+|+++||..
T Consensus 107 ~~Ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~v~~~~~~~a~~ 148 (152)
T 2onu_A 107 PQLLTYPNPSDPLNSDAASLLMKDKNIYEEKVKEYVKLYASK 148 (152)
T ss_dssp HHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHSCG
T ss_pred HHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccC
Confidence 899999999999999999999999999999999999999963
No 25
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4e-44 Score=248.21 Aligned_cols=116 Identities=33% Similarity=0.625 Sum_probs=113.4
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCceeecCCCCCCCCCCcccHHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQD 80 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~ic~~~l~~~~~W~p~~~i~~il~~i~~ 80 (121)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.. +|+|+++|.+||.+|++
T Consensus 60 ~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~G~ICL~iL~~--~WsP~~ti~~vL~sI~s 137 (179)
T 1i7k_A 60 FKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNISLDILKE--KWSALYDVRTILLSIQS 137 (179)
T ss_dssp EEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCTTCBBCCGGGTT--TCCTTCCHHHHHHHHHH
T ss_pred cccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCccccCCeEEcccCcC--cCCCCCCHHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999987 89999999999999999
Q ss_pred hhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcCC
Q 033359 81 LLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPP 119 (121)
Q Consensus 81 ~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~~ 119 (121)
+|.+|++++|+|.+|+++| +|+++|.++|++++++++.
T Consensus 138 ll~~Pn~~~Pln~~aa~l~-~d~~~f~~~v~~~v~~~~~ 175 (179)
T 1i7k_A 138 LLGEPNIDSPLNTHAAELW-KNPTAFKKYLQETYSKQVT 175 (179)
T ss_dssp HHHSCCTTSCSCHHHHHHT-TSHHHHHHHHHHHHHTTCC
T ss_pred HHhCCCCcchhhHHHHHHh-hCHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999 9999999999999999875
No 26
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=7e-44 Score=244.85 Aligned_cols=118 Identities=26% Similarity=0.579 Sum_probs=113.0
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCceeecCCCC----CCCCCCcccHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNE----DNGWRPAITVKQILV 76 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~ic~~~l~~----~~~W~p~~~i~~il~ 76 (121)
++|+++| ||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.. .++|+|+++|.+||.
T Consensus 45 ~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~ 123 (167)
T 3fn1_B 45 HCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVW 123 (167)
T ss_dssp TEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSBCTTCCBCCGGGSBCSSSTTSBCTTCCHHHHHH
T ss_pred eeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCCCCCCEEechhhccCCCCCCCCCCcCcHHHHHH
Confidence 4799999 89999999999999999999999999999999999999999999999999975 247999999999999
Q ss_pred HHHHhhcC-CCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcCC
Q 033359 77 GIQDLLDQ-PNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPP 119 (121)
Q Consensus 77 ~i~~~l~~-p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~~ 119 (121)
+|+++|.+ |++++|+|.+|+++|++|+++|.++||+|+++||.
T Consensus 124 ~i~~ll~~~pn~~~p~n~eaa~~~~~~~~~f~~~~r~~~~~~A~ 167 (167)
T 3fn1_B 124 GLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKRYAR 167 (167)
T ss_dssp HHHHTTTTTCCSSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHcCCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 99999999 79999999999999999999999999999999985
No 27
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=4.9e-44 Score=242.99 Aligned_cols=116 Identities=28% Similarity=0.642 Sum_probs=113.2
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCceeecCC-CCCCCCCCcccHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSIL-NEDNGWRPAITVKQILVGIQ 79 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~ic~~~l-~~~~~W~p~~~i~~il~~i~ 79 (121)
++|+++|. |++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++| .. +|+|+++|.+||.+|+
T Consensus 35 ~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iCl~iL~~~--~W~p~~~i~~vl~~i~ 111 (155)
T 1wzv_A 35 LVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVDENGQICLPIISSE--NWKPCTKTCQVLEALN 111 (155)
T ss_dssp TEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBCCCGGGCTT--TCCTTCCHHHHHHHHH
T ss_pred heEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCCCCCeEeecCCCcc--CCCCCCcHHHHHHHHH
Confidence 58999999 99999999999999999999999999999999999999999999999999 55 8999999999999999
Q ss_pred HhhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcCC
Q 033359 80 DLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPP 119 (121)
Q Consensus 80 ~~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~~ 119 (121)
++|.+|++++|+|.+|+++|++|+++|+++||+|+++||.
T Consensus 112 ~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~ 151 (155)
T 1wzv_A 112 VLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGV 151 (155)
T ss_dssp HHHHSCCSSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCE
T ss_pred HHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999985
No 28
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=1.4e-44 Score=256.56 Aligned_cols=118 Identities=32% Similarity=0.688 Sum_probs=115.0
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeC-CCceeecCCCCCCCCCCcccHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYP-SGTVCLSILNEDNGWRPAITVKQILVGIQ 79 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~-~G~ic~~~l~~~~~W~p~~~i~~il~~i~ 79 (121)
++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+. +|+||+++|.. +|+|+++|.+||.+|+
T Consensus 33 ~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~--~WsP~~ti~~VL~sI~ 110 (215)
T 1tte_A 33 HHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDILRN--AWSPVITLKSALISLQ 110 (215)
T ss_dssp CEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSCSSSSCCCSSTTTC--CSCTTCCHHHHHHHHH
T ss_pred cccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCcCCCCEEECccCCC--CCCCcCcHHHHHHHHH
Confidence 38999999999999999999999999999999999999999999999998 99999999987 8999999999999999
Q ss_pred HhhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcCCC
Q 033359 80 DLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPPV 120 (121)
Q Consensus 80 ~~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~~~ 120 (121)
++|.+|++++|+|.+|+.+|++|+++|.++||+|+++||..
T Consensus 111 sLL~~Pnp~~Pln~eaa~~~~~d~~~f~~~ar~~t~~yA~~ 151 (215)
T 1tte_A 111 ALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYASE 151 (215)
T ss_dssp HHHTSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHSSCC
T ss_pred HHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999963
No 29
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.6e-44 Score=250.10 Aligned_cols=117 Identities=32% Similarity=0.692 Sum_probs=114.5
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeC-CCceeecCCCCCCCCCCcccHHHHHHH-H
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYP-SGTVCLSILNEDNGWRPAITVKQILVG-I 78 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~-~G~ic~~~l~~~~~W~p~~~i~~il~~-i 78 (121)
++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+. +|+||+++|.+ +|+|+++|.+||.+ |
T Consensus 51 ~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~~~~G~ICL~iL~~--~WsP~~ti~~iL~s~I 128 (179)
T 2z5d_A 51 NEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQ--TWTALYDLTNIFESFL 128 (179)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCHHHHHH--HCCTTCCTTHHHHTHH
T ss_pred ceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCCCCCCeEecccccc--CCCCCCCHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999998 99999999987 89999999999999 9
Q ss_pred HHhhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcCC
Q 033359 79 QDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPP 119 (121)
Q Consensus 79 ~~~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~~ 119 (121)
+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||.
T Consensus 129 ~~Ll~~Pn~~~p~n~eaa~~~~~d~~~y~~~vr~~~~~~a~ 169 (179)
T 2z5d_A 129 PQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYAT 169 (179)
T ss_dssp HHHHHSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSS
T ss_pred HHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999999999999999999999986
No 30
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=1.8e-43 Score=243.82 Aligned_cols=118 Identities=28% Similarity=0.505 Sum_probs=113.2
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecC-CCCcceee-CCCceeecCCCCCCCCCCcccHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQ-GFFHPNVY-PSGTVCLSILNEDNGWRPAITVKQILVGI 78 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t-~i~Hpnv~-~~G~ic~~~l~~~~~W~p~~~i~~il~~i 78 (121)
++|+++|.||++|||+||+|+++|.||++||++||+|+|.| ++|||||+ .+|+||+++|..+ +|+|+++|.+||.+|
T Consensus 48 ~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~~i~HPni~~~~G~iCl~iL~~~-~W~p~~~i~~vL~si 126 (172)
T 2y9m_A 48 SKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKISFMQNNILHCNVKSATGEICLNILKPE-EWTPVWDLLHCVHAV 126 (172)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECTTSCCCTTEETTTTEECCGGGSTT-TCCTTCCHHHHHHHH
T ss_pred hEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCEEEEeeCCeecCCCcCCCCEEeccccCCC-CCCCcCcHHHHHHHH
Confidence 58999999999999999999999999999999999999999 99999997 7999999999832 899999999999999
Q ss_pred HHhhcCCCCCCCcCHHHHHHHhh-CHHHHHHHHHHHHHHcCC
Q 033359 79 QDLLDQPNPADPAQTDGYQLFIQ-DPAEYKRRVRQQAKQYPP 119 (121)
Q Consensus 79 ~~~l~~p~~~~~~n~~a~~~~~~-~~~~f~~~~~~~~~k~~~ 119 (121)
+++|.+|++++|+|.+|+++|++ |+++|.++||+|+++++.
T Consensus 127 ~~ll~~p~~~~p~n~~aa~~~~~~d~~~f~~~~~~~~~~~~~ 168 (172)
T 2y9m_A 127 WRLLREPVCDSPLDVDIGNIIRCGDMSAYQGIVKYFLAERER 168 (172)
T ss_dssp HHHHHSCCTTSCSSHHHHHHHTTTCHHHHHHHHHHHHHHHHC
T ss_pred HHHHhCCCCCCccCHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999 999999999999999864
No 31
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=2.8e-43 Score=254.93 Aligned_cols=118 Identities=32% Similarity=0.649 Sum_probs=114.7
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeC-CCceeecCCCCCCCCCCcccHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYP-SGTVCLSILNEDNGWRPAITVKQILVGIQ 79 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~-~G~ic~~~l~~~~~W~p~~~i~~il~~i~ 79 (121)
++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+. +|+||+++|.. +|+|+++|.+||.+|+
T Consensus 90 ~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~~G~ICL~iL~~--~WsP~~ti~~vL~sI~ 167 (253)
T 3e46_A 90 TELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKD--QWAAAMTLRTVLLSLQ 167 (253)
T ss_dssp SEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCGGGTT--CCCTTCCHHHHHHHHH
T ss_pred cEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCccCCccCCCCeeecccccC--CCCCCCCHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999994 99999999987 8999999999999999
Q ss_pred HhhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcCCC
Q 033359 80 DLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPPV 120 (121)
Q Consensus 80 ~~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~~~ 120 (121)
++|.+|++++|+|.+|+++|++|+++|.++||+|+++||..
T Consensus 168 ~ll~~pnp~~Pln~eaa~l~~~d~~~f~~~ar~~t~~yA~~ 208 (253)
T 3e46_A 168 ALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 208 (253)
T ss_dssp HHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred HHhcCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999863
No 32
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=7.6e-44 Score=245.36 Aligned_cols=117 Identities=30% Similarity=0.569 Sum_probs=113.5
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeC-CCceeecCCCCCCCCCCcccHHHHHHHH-
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYP-SGTVCLSILNEDNGWRPAITVKQILVGI- 78 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~-~G~ic~~~l~~~~~W~p~~~i~~il~~i- 78 (121)
++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+. +|+||+++|.. +|+|+++|++||.+|
T Consensus 38 ~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~~~G~iCl~iL~~--~W~p~~~i~~vL~sil 115 (171)
T 1yf9_A 38 AEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDERSGSVCLDVINQ--TWTPMYQLENIFDVFL 115 (171)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCHHHHHH--HCCTTCCTHHHHHTHH
T ss_pred eEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCcccCCeEecccccc--CCCCCCcHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999995 99999999987 899999999999997
Q ss_pred HHhhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcCC
Q 033359 79 QDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPP 119 (121)
Q Consensus 79 ~~~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~~ 119 (121)
++||.+|+.++|+|.+|+.+|++|+++|.++||+|+++||.
T Consensus 116 ~~ll~~Pn~~~p~n~~aa~~~~~d~~~y~~~vr~~~~~~a~ 156 (171)
T 1yf9_A 116 PQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHAT 156 (171)
T ss_dssp HHHHHSCCSSCCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred HHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcC
Confidence 79999999999999999999999999999999999999986
No 33
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=1.3e-43 Score=240.70 Aligned_cols=118 Identities=26% Similarity=0.672 Sum_probs=111.6
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCceeecCCCCCCCCCCcccHHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQD 80 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~ic~~~l~~~~~W~p~~~i~~il~~i~~ 80 (121)
++|+++|. |+||||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|..+ +|+|++++.+||.+|++
T Consensus 33 ~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~-~W~p~~~i~~vl~~i~~ 110 (154)
T 1c4z_D 33 LTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAE-NWKPATKTDQVIQSLIA 110 (154)
T ss_dssp SEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTCBBCCTTTSSS-SCCTTCCHHHHHHHHHH
T ss_pred heEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCCCCEEECCCCCCC-CCCCCCcHHHHHHHHHH
Confidence 58999998 99999999999999999999999999999999999999999999999999732 79999999999999999
Q ss_pred hhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcCCC
Q 033359 81 LLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPPV 120 (121)
Q Consensus 81 ~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~~~ 120 (121)
+|.+|++++|+|.+|+++|++|+++|.++||+|+++||..
T Consensus 111 ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (154)
T 1c4z_D 111 LVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGEK 150 (154)
T ss_dssp HHHSCCCSSCSCHHHHHHHHTCSSTTHHHHHHHHTTC---
T ss_pred HHcCCCCCchhhHHHHHHHHHhHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999863
No 34
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=4.4e-43 Score=243.95 Aligned_cols=119 Identities=37% Similarity=0.735 Sum_probs=112.0
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCceeecCCCC-----------CCCCCCcc
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNE-----------DNGWRPAI 69 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~ic~~~l~~-----------~~~W~p~~ 69 (121)
++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+++|+||+++|.. .++|+|++
T Consensus 38 ~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~ 117 (183)
T 3rz3_A 38 YNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQ 117 (183)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCTTBCTTSBBCCTTC--------------CCCCTTC
T ss_pred hheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccCCCCCCCcEehhhcCcccccccccccccCCCCCcC
Confidence 5899999999999999999999999999999999999999999999999999999999972 13899999
Q ss_pred cHHHHHHHHHHhhcCCCCCCCcCHHHHHHHhh------CHHHHHHHHHHHHHHcCC
Q 033359 70 TVKQILVGIQDLLDQPNPADPAQTDGYQLFIQ------DPAEYKRRVRQQAKQYPP 119 (121)
Q Consensus 70 ~i~~il~~i~~~l~~p~~~~~~n~~a~~~~~~------~~~~f~~~~~~~~~k~~~ 119 (121)
+|++||.+|+++|.+|++++|+|.+|+.+|++ ++++|+++||++|+++..
T Consensus 118 ~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~~~~~~~y~~~v~~~v~~s~~ 173 (183)
T 3rz3_A 118 NVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIRKQVLGTKV 173 (183)
T ss_dssp CHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhcccccccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998 789999999999999853
No 35
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-42 Score=237.46 Aligned_cols=113 Identities=28% Similarity=0.641 Sum_probs=110.2
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCceeecCCCCCCCCCCcccHHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQD 80 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~ic~~~l~~~~~W~p~~~i~~il~~i~~ 80 (121)
++|+++| ||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.. +|+|+++|.+||.+|++
T Consensus 35 ~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~--~W~p~~~i~~vL~~i~~ 111 (160)
T 1y8x_A 35 LNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILRE--DWKPVLTINSIIYGLQY 111 (160)
T ss_dssp TEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCBBCCGGGTT--TCCTTCCHHHHHHHHHH
T ss_pred ceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcCCCCCeEEcccchh--hccCCCCHHHHHHHHHH
Confidence 5899998 99999999999999999999999999999999999999999999999999987 89999999999999999
Q ss_pred hhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHH
Q 033359 81 LLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQ 116 (121)
Q Consensus 81 ~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k 116 (121)
+|.+|+.++|+|.+|+.+|++|+++|.++||++++.
T Consensus 112 ll~~Pn~~~p~n~~aa~~~~~~~~~f~~~v~~~v~~ 147 (160)
T 1y8x_A 112 LFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 147 (160)
T ss_dssp HHHSCCCSSCSCHHHHHHHHSCHHHHHHHHHHHHHS
T ss_pred HHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999984
No 36
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5.1e-43 Score=240.84 Aligned_cols=115 Identities=30% Similarity=0.600 Sum_probs=108.8
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCccee-eCCCceeecCCCCCCCCCCcccHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNV-YPSGTVCLSILNEDNGWRPAITVKQILVGIQ 79 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv-~~~G~ic~~~l~~~~~W~p~~~i~~il~~i~ 79 (121)
++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++||||| +.+|+||+++|...++|+|+++|.+||.+|+
T Consensus 53 ~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~~~~WsP~~ti~~vL~sI~ 132 (169)
T 1yrv_A 53 MEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQ 132 (169)
T ss_dssp CEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTTBCTTTCCBCCHHHHCGGGCCTTCCHHHHHHHHH
T ss_pred ccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCcccCCCCeEeehhhcCCcCCCCcCCHHHHHHHHH
Confidence 589999999999999999999999999999999999999999999999 7899999999982228999999999999999
Q ss_pred HhhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHH
Q 033359 80 DLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQ 116 (121)
Q Consensus 80 ~~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k 116 (121)
++|.+|++++|+|.+||++|++|+++|+++ |+++++
T Consensus 133 sll~~Pn~~~Pln~eaa~l~~~d~~~y~~~-~~~v~~ 168 (169)
T 1yrv_A 133 VMLSNPVLENPVNLEAARILVKDESLYRTI-LRLFNR 168 (169)
T ss_dssp HHHTSCCTTSCSCHHHHHHHHSCHHHHHHH-HHHHC-
T ss_pred HHHhCCCCCCchhHHHHHHHHHCHHHHHHH-HHHhhC
Confidence 999999999999999999999999999999 888764
No 37
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=5.3e-43 Score=241.44 Aligned_cols=113 Identities=41% Similarity=0.774 Sum_probs=81.5
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCceeecCCCC-----------CCCCCCcc
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNE-----------DNGWRPAI 69 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~ic~~~l~~-----------~~~W~p~~ 69 (121)
++|+++|.||++||||||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.. .++|+|++
T Consensus 48 ~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPNV~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ 127 (172)
T 2awf_A 48 YRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIH 127 (172)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTCBBCCGGGSCC---------CTTSCCTTC
T ss_pred cccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCCCCCCCcEehhhcCCcccccccccccCCCCCCcC
Confidence 5899999999999999999999999999999999999999999999999999999999973 14899999
Q ss_pred cHHHHHHHHHHhhcCCCCCCCcCHHHHHHHhhCHH-HHHHHHHHH
Q 033359 70 TVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPA-EYKRRVRQQ 113 (121)
Q Consensus 70 ~i~~il~~i~~~l~~p~~~~~~n~~a~~~~~~~~~-~f~~~~~~~ 113 (121)
+|++||.+|+++|.+|++++|+|.+||++|++|++ +|+++||++
T Consensus 128 ti~~vL~sI~sll~~Pn~~~p~n~~aa~~~~~d~~~~f~~~vr~~ 172 (172)
T 2awf_A 128 TVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARC 172 (172)
T ss_dssp CHHHHHHHHHHHHSCC-----------------------------
T ss_pred cHHHHHHHHHHHHHCcCCCCccCHHHHHHHHHCcHHHHHHHHHhC
Confidence 99999999999999999999999999999999999 999999975
No 38
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.1e-42 Score=239.87 Aligned_cols=114 Identities=27% Similarity=0.592 Sum_probs=110.7
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCceeecCCCCCCCCCCcccHHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQD 80 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~ic~~~l~~~~~W~p~~~i~~il~~i~~ 80 (121)
++|+++| ||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.. +|+|+++|.+||.+|++
T Consensus 55 ~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNV~~~G~iCl~iL~~--~W~p~~~i~~vL~si~~ 131 (180)
T 2nvu_C 55 LNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVALNILRE--DWKPVLTINSIIYGLQY 131 (180)
T ss_dssp TEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTSBBCCGGGTT--SCCTTCCHHHHHHHHHH
T ss_pred cceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCCCCCCCcEEcccccc--cCCCCCCHHHHHHHHHH
Confidence 5899999 99999999999999999999999999999999999999999999999999987 89999999999999999
Q ss_pred hhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHc
Q 033359 81 LLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQY 117 (121)
Q Consensus 81 ~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~ 117 (121)
+|.+|++++|+|.+|+.+|++|+++|.++||++++..
T Consensus 132 ll~~Pn~~~p~n~~aa~~~~~d~~~f~~~v~~~v~~~ 168 (180)
T 2nvu_C 132 LFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGG 168 (180)
T ss_dssp HHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHSE
T ss_pred HHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999853
No 39
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=2.5e-41 Score=236.18 Aligned_cols=113 Identities=34% Similarity=0.605 Sum_probs=109.9
Q ss_pred EeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCceeecCCCCCCCCCCcccHHHHHHHHHHh
Q 033359 2 IWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDL 81 (121)
Q Consensus 2 ~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~ic~~~l~~~~~W~p~~~i~~il~~i~~~ 81 (121)
+|+++|. |++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.. +|+|+++|++||.+|+++
T Consensus 65 ~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iCl~iL~~--~W~p~~~i~~vL~~i~~l 141 (190)
T 3o2u_A 65 KLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIFHPNIDLKGNVCLNILRE--DWSPALDLQSIITGLLFL 141 (190)
T ss_dssp EEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECSCCCCTTBCTTSBBCCGGGTT--TCCTTCCHHHHHHHHHHH
T ss_pred eEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEecCcccCCCCCCCeEechhccC--CCCCCCCHHHHHHHHHHH
Confidence 8999997 8889999999999999999999999999999999999999999999999987 899999999999999999
Q ss_pred hcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHc
Q 033359 82 LDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQY 117 (121)
Q Consensus 82 l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~ 117 (121)
|.+|++++|+|.+|+++|++|+++|.++||+|++.+
T Consensus 142 l~~pn~~~pln~~aa~~~~~d~~~f~~~ar~~~~~~ 177 (190)
T 3o2u_A 142 FLEPNPNDPLNKDAAKLLCEGEKEFAEAVRLTMSGG 177 (190)
T ss_dssp HHSCCTTSCSSHHHHHHHHTCHHHHHHHHHHHHBTC
T ss_pred HhCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999764
No 40
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=4.1e-41 Score=257.47 Aligned_cols=118 Identities=36% Similarity=0.742 Sum_probs=115.2
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCceeecCCCCCCCCCCcccHHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQD 80 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~ic~~~l~~~~~W~p~~~i~~il~~i~~ 80 (121)
++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.. +|+|+++|.+||.+|++
T Consensus 33 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~il~~--~W~p~~~i~~vL~~i~~ 110 (399)
T 4ddg_A 33 FHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSISLDILRS--QWSPALTISKVLLSICS 110 (399)
T ss_dssp EEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBCTTCBBCCGGGTT--SCCTTCCHHHHHHHHHH
T ss_pred eEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccCCCCeEeCccccc--CCCccccHHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999987 89999999999999999
Q ss_pred hhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcCCC
Q 033359 81 LLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYPPV 120 (121)
Q Consensus 81 ~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~~~ 120 (121)
+|.+|++++|+|.+|+++|++|+++|.++||+|+++||..
T Consensus 111 ll~~pnp~~p~n~~aa~~~~~d~~~y~~~~~~~~~~~a~~ 150 (399)
T 4ddg_A 111 LLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAMG 150 (399)
T ss_dssp HHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHTSC
T ss_pred HHcCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999999999999863
No 41
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=5.9e-39 Score=220.30 Aligned_cols=110 Identities=22% Similarity=0.535 Sum_probs=103.3
Q ss_pred CEeEEEecCCCCCCCC--CCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCceeecCCCCCCCCCCcccHHHHHH-H
Q 033359 1 MIWECIIPGKTGTDWE--GGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILV-G 77 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~--gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~ic~~~l~~~~~W~p~~~i~~il~-~ 77 (121)
++|+++|.||++|||+ ||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.. +|+|+++++++|. .
T Consensus 50 ~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~il~~--~W~p~~~i~~vll~~ 127 (167)
T 4ds2_A 50 YNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHEPPTVRFVTPVYSPLVTGEGGICDRMVND--FWTPDQHASDVIKLV 127 (167)
T ss_dssp TEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTSCCEEEESSCCCCSSCCTTSCCCTHHHHT--TCCTTSCHHHHHHHH
T ss_pred cEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCCCCEEEEeCCcccccCCCCCEEEcccCcC--CCCCCCChHHHHHHH
Confidence 5899999999999999 999999999999999999999999999999999999999999987 8999999999754 6
Q ss_pred HHHhhcC--CCCCCCcCHHHHHHHhhCHHHHHHHHHH
Q 033359 78 IQDLLDQ--PNPADPAQTDGYQLFIQDPAEYKRRVRQ 112 (121)
Q Consensus 78 i~~~l~~--p~~~~~~n~~a~~~~~~~~~~f~~~~~~ 112 (121)
|++++.+ |+.++|+|.+|+++|++|+++|+++||+
T Consensus 128 l~~l~~~~~pn~~~p~n~eaa~l~~~d~~~f~~~vrr 164 (167)
T 4ds2_A 128 LDRVFSQYKSRRDDDVNPEARHYLEKFPQDFAARVRR 164 (167)
T ss_dssp HHHHHTSTTSCCSCCCCHHHHHHHHHCHHHHHHHHTT
T ss_pred HHHHHhcCCCCCcchHhHHHHHHHHHCHHHHHHHHhh
Confidence 7777764 8999999999999999999999999983
No 42
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=3.2e-38 Score=234.49 Aligned_cols=119 Identities=34% Similarity=0.650 Sum_probs=110.8
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCC-----CCcceeeCCCceeecCCCC-----CCCCCCcc-
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQG-----FFHPNVYPSGTVCLSILNE-----DNGWRPAI- 69 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~-----i~Hpnv~~~G~ic~~~l~~-----~~~W~p~~- 69 (121)
++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+ +|||||+.+|+||+++|.. .++|+|++
T Consensus 110 ~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g~~~ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~s 189 (323)
T 3ceg_A 110 DIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTS 189 (323)
T ss_dssp TEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTTTTCCCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTC
T ss_pred cccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCCCcccccCCCCcCCeEechhhccccCCCcCCCCcCcC
Confidence 479999999999999999999999999999999999999998 9999999999999999973 13899999
Q ss_pred cHHHHHHHHHHhhc--CCCCCCCcCHHH--HHHHhhCHHHHHHHHHHHHHHcCC
Q 033359 70 TVKQILVGIQDLLD--QPNPADPAQTDG--YQLFIQDPAEYKRRVRQQAKQYPP 119 (121)
Q Consensus 70 ~i~~il~~i~~~l~--~p~~~~~~n~~a--~~~~~~~~~~f~~~~~~~~~k~~~ 119 (121)
+|.+||.+|++||. +|++++|+|.++ +.++.+|+++|.++||+|+++||.
T Consensus 190 tI~~VLlsIqsLL~~~~Pn~~dP~~~~a~a~~~~~~d~~~Y~~~vr~~t~k~A~ 243 (323)
T 3ceg_A 190 SFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNIRQATVKWAM 243 (323)
T ss_dssp CHHHHHHHHHHHTSCSSGGGGSTTGGGGTTSHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHcCCCCCCCCccCHHHHHhhhhhhhHHHHHHHHHHHHHHHhh
Confidence 89999999999995 788899999987 578999999999999999999973
No 43
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=2.8e-38 Score=214.72 Aligned_cols=99 Identities=26% Similarity=0.540 Sum_probs=92.7
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCce---eecCCCCCCCCCCcccHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTV---CLSILNEDNGWRPAITVKQILVG 77 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~i---c~~~l~~~~~W~p~~~i~~il~~ 77 (121)
++|+++|.||++||||||+|+++|.||++||++||+|+|.|++|||||+.+|+| |+++|.. |+|+++|++||.+
T Consensus 55 ~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNV~~~G~icisCL~iL~~---WsP~~ti~~vL~s 131 (156)
T 2q0v_A 55 SNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIEMSCVDNCGRVIKNNLHILKN---WNRNYTIETILIS 131 (156)
T ss_dssp CEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTSBBCGGGSHHHHT---CCTTCCHHHHHHH
T ss_pred eeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccccCCCccCCeEehhhcccccC---CCCcCcHHHHHHH
Confidence 589999999999999999999999999999999999999999999999999999 8888763 9999999999999
Q ss_pred HHHhhcCCCCCCCcCHHHHHHHhhC
Q 033359 78 IQDLLDQPNPADPAQTDGYQLFIQD 102 (121)
Q Consensus 78 i~~~l~~p~~~~~~n~~a~~~~~~~ 102 (121)
|+++|.+|+.++++|++|+.+|++|
T Consensus 132 I~~ll~~Pn~~~p~n~~aa~~y~~n 156 (156)
T 2q0v_A 132 LRQEMLSSANKRLPQPNEGEVYSNN 156 (156)
T ss_dssp HHHHTTSTTTTTCCCCCTTCBC---
T ss_pred HHHHHhCCCCCCcCChHHHHHhhhC
Confidence 9999999999999999999998764
No 44
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=1.5e-36 Score=206.79 Aligned_cols=96 Identities=22% Similarity=0.405 Sum_probs=90.1
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceee-CCCceeecCCCCCCCCCCcccHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVY-PSGTVCLSILNEDNGWRPAITVKQILVGIQ 79 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~-~~G~ic~~~l~~~~~W~p~~~i~~il~~i~ 79 (121)
++|+++|.||++||||||+|+++|.||++||++||+|+|.|++|||||+ .+|+||+++|...++|+|+++|++||.+|+
T Consensus 59 ~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~ 138 (160)
T 2a4d_A 59 TRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELR 138 (160)
T ss_dssp CEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTTCBBCGGGSHHHHTCCTTCCHHHHHHHHH
T ss_pred eeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCceeCCEECCCCEEehhhcCCccCCCccCcHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999 699999999982127999999999999999
Q ss_pred Hhh-cCCCCCCCcCHHHH
Q 033359 80 DLL-DQPNPADPAQTDGY 96 (121)
Q Consensus 80 ~~l-~~p~~~~~~n~~a~ 96 (121)
++| .+|+.++|+|.|||
T Consensus 139 ~ll~~~pn~~~P~n~eaa 156 (160)
T 2a4d_A 139 RLMMSKENMKLPQPPEGQ 156 (160)
T ss_dssp HHHTSTTTTTCCCCCTTC
T ss_pred HHHccCCCCCCCCChhhc
Confidence 999 57999999999876
No 45
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=2.8e-37 Score=206.17 Aligned_cols=96 Identities=25% Similarity=0.496 Sum_probs=90.7
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCC-Cce--eecCCCCCCCCCCcccHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPS-GTV--CLSILNEDNGWRPAITVKQILVG 77 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~-G~i--c~~~l~~~~~W~p~~~i~~il~~ 77 (121)
++|+++|.||++||||||+|+++|.||++||++||+|+|.|++|||||+.+ |+| |++++. +|+|+++|++||.+
T Consensus 40 ~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~~G~i~~cL~~l~---~W~p~~~i~~vl~~ 116 (138)
T 1jat_B 40 TKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLPCVNPTTGEVQTDFHTLR---DWKRAYTMETLLLD 116 (138)
T ss_dssp CEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTTCBBCTTSHHHH---TCCTTCCHHHHHHH
T ss_pred eEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcccccCCEeCCCCEEeeecccCC---CCCCcCcHHHHHHH
Confidence 589999999999999999999999999999999999999999999999986 999 898875 49999999999999
Q ss_pred HHHhhcCCCCCCCcCHHHHHHH
Q 033359 78 IQDLLDQPNPADPAQTDGYQLF 99 (121)
Q Consensus 78 i~~~l~~p~~~~~~n~~a~~~~ 99 (121)
|+++|.+|+.++++|++|+.+|
T Consensus 117 i~~ll~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 117 LRKEMATPANKKLRQPKEGETF 138 (138)
T ss_dssp HHHHHTSHHHHTSCCCCTTCBC
T ss_pred HHHHHcCCCCCCCCCcchhhcC
Confidence 9999999999999999887653
No 46
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=1.6e-35 Score=194.69 Aligned_cols=87 Identities=29% Similarity=0.621 Sum_probs=79.1
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCC-CcceeeCCCceeecCCCCCCCCCCcccHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGF-FHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQ 79 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i-~Hpnv~~~G~ic~~~l~~~~~W~p~~~i~~il~~i~ 79 (121)
++|+++|.||++||||||+|+++|.||++||++||+|+|.|++ |||||+.+|+||+++|.+ +|+|++++++||.+|+
T Consensus 36 ~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~~G~iCl~iL~~--~W~P~~~i~~vl~si~ 113 (125)
T 2fo3_A 36 RIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTHVYSNGDICLSLLGD--DYNPSLSISGLVLSII 113 (125)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTTBCTTSBBCCGGGTT--TCCTTCCHHHHHHHHH
T ss_pred hhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCcCCCCCEEEchhcCC--CCCCCCcHHHHHHHHH
Confidence 5899999999999999999999999999999999999999996 999999999999999987 8999999999999999
Q ss_pred HhhcCCCCCC
Q 033359 80 DLLDQPNPAD 89 (121)
Q Consensus 80 ~~l~~p~~~~ 89 (121)
++|.+|+...
T Consensus 114 ~ll~~p~~~~ 123 (125)
T 2fo3_A 114 SMLSSAKEKK 123 (125)
T ss_dssp HHHC------
T ss_pred HHHhCccccc
Confidence 9999988653
No 47
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=3.5e-36 Score=206.83 Aligned_cols=96 Identities=22% Similarity=0.392 Sum_probs=89.8
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceee-CCCceeecCCCCCCCCCCcccHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVY-PSGTVCLSILNEDNGWRPAITVKQILVGIQ 79 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~-~~G~ic~~~l~~~~~W~p~~~i~~il~~i~ 79 (121)
++|+++|.||++||||||+|+++|.||++||++||+|+|.|++|||||+ .+|+||+++|...++|+|+++|++||.+|+
T Consensus 69 ~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~ 148 (170)
T 2hlw_A 69 TRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELR 148 (170)
T ss_dssp CBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCCSSBCSSSCBBCTTTCHHHHTCCSSCCHHHHHHHHH
T ss_pred eeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccccCCEeCCCCEEEhhhcCCCCCCCccCcHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999 799999999972127999999999999999
Q ss_pred Hhhc-CCCCCCCcCHHHH
Q 033359 80 DLLD-QPNPADPAQTDGY 96 (121)
Q Consensus 80 ~~l~-~p~~~~~~n~~a~ 96 (121)
++|. +|+.++|+|.|||
T Consensus 149 ~ll~~~pn~~~P~n~eaa 166 (170)
T 2hlw_A 149 RLMMSKENMKLPQPPEGQ 166 (170)
T ss_dssp HHHHSTTTSSSCCCSSCC
T ss_pred HHHccCCCCCCCCCcccc
Confidence 9996 5999999999876
No 48
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=8.4e-35 Score=193.69 Aligned_cols=85 Identities=27% Similarity=0.626 Sum_probs=82.0
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCC-CcceeeCCCceeecCCCCCCCCCCcccHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGF-FHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQ 79 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i-~Hpnv~~~G~ic~~~l~~~~~W~p~~~i~~il~~i~ 79 (121)
++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++ |||||+.+|+||+++|.+ +|+|+++|.+||.+|+
T Consensus 50 ~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~~G~ICl~iL~~--~WsP~~ti~~vL~si~ 127 (136)
T 2h2y_A 50 RIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHVYSNGDICLSVLGD--DYNPSLSISGLILSII 127 (136)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTTBCTTCCBCCGGGTT--TCCTTCCHHHHHHHHH
T ss_pred cccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcCCCCCEEECccccC--CCCCCCcHHHHHHHHH
Confidence 5899999999999999999999999999999999999999996 999999999999999987 8999999999999999
Q ss_pred HhhcCCCC
Q 033359 80 DLLDQPNP 87 (121)
Q Consensus 80 ~~l~~p~~ 87 (121)
++|.+|+.
T Consensus 128 sll~~p~~ 135 (136)
T 2h2y_A 128 SMLSSAKE 135 (136)
T ss_dssp HHHSSSCC
T ss_pred HHHhCcCc
Confidence 99998874
No 49
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=7.8e-34 Score=188.93 Aligned_cols=81 Identities=38% Similarity=0.768 Sum_probs=78.3
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCC--cceeeCCCceeecCCCCCCCCCCcccHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFF--HPNVYPSGTVCLSILNEDNGWRPAITVKQILVGI 78 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~--Hpnv~~~G~ic~~~l~~~~~W~p~~~i~~il~~i 78 (121)
++|+++|.||+|||||||+|+++|.||++||++||+|+|.|++| ||||+.+|+||+++|.+ +|+|+++|++||.+|
T Consensus 54 ~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPNV~~~G~ICL~iL~~--~WsP~~ti~~vL~sI 131 (136)
T 2a7l_A 54 TQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTE--DWSPALSVQSVCLSI 131 (136)
T ss_dssp EEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTTBCTTCBBCCGGGTT--TCCTTSCHHHHHHHH
T ss_pred ceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCccCCCCCeEEchhcCC--CCCCCCcHHHHHHHH
Confidence 47999999999999999999999999999999999999999999 99999999999999987 899999999999999
Q ss_pred HHhhc
Q 033359 79 QDLLD 83 (121)
Q Consensus 79 ~~~l~ 83 (121)
+++|.
T Consensus 132 ~slL~ 136 (136)
T 2a7l_A 132 ISMLS 136 (136)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99973
No 50
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.97 E-value=1.2e-31 Score=186.82 Aligned_cols=87 Identities=29% Similarity=0.596 Sum_probs=74.8
Q ss_pred CEeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCceeecCCCC-CCCCCCcccHHHHHHHHH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNE-DNGWRPAITVKQILVGIQ 79 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~ic~~~l~~-~~~W~p~~~i~~il~~i~ 79 (121)
++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+ ||+|+.+|+||+++|.. .++|+|+++|.+||.+|+
T Consensus 44 ~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~~~~G~ICL~iL~~~~~~W~P~~ti~~vL~si~ 121 (187)
T 2f4w_A 44 LEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLL 121 (187)
T ss_dssp EEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSBCTTSCBC----------CCTTCCHHHHHHHHH
T ss_pred ceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--CceeccCCeEeeeccccCccCCCCcCcHHHHHHHHH
Confidence 479999999999999999999999999999999999999999 99999999999999942 128999999999999999
Q ss_pred HhhcCCCCCC
Q 033359 80 DLLDQPNPAD 89 (121)
Q Consensus 80 ~~l~~p~~~~ 89 (121)
++|.+|+++.
T Consensus 122 sll~~p~p~~ 131 (187)
T 2f4w_A 122 SFMVEKGPTL 131 (187)
T ss_dssp HHHHSCCCCT
T ss_pred HHhcCCCCCC
Confidence 9998888753
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=99.97 E-value=1e-33 Score=197.12 Aligned_cols=108 Identities=19% Similarity=0.411 Sum_probs=94.5
Q ss_pred CEeEEEecCC-CCCCCCC-----------CEEEEEEEcCCCCCCCCCcceecCCCCcc-eeeCCCceeecCCCCCCCCCC
Q 033359 1 MIWECIIPGK-TGTDWEG-----------GYFPLTLYFSEDYPSKPPKCKFPQGFFHP-NVYPSGTVCLSILNEDNGWRP 67 (121)
Q Consensus 1 ~~W~~~i~Gp-~~tpy~g-----------g~f~~~i~f~~~yP~~pP~v~f~t~i~Hp-nv~~~G~ic~~~l~~~~~W~p 67 (121)
++|+++|.|| ++|||+| |+|+++|.||++||++||+|+|.|++||| ||+.+|+||+++|..+ +|+|
T Consensus 60 ~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~~PP~V~f~tpi~hPnnV~~~G~ICL~iL~~~-~WsP 138 (186)
T 1zuo_A 60 YDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVLPVLSGGYVLGGGALCMELLTKQ-GWSS 138 (186)
T ss_dssp EEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTSSCCEEEEEESCEESTTBCGGGBBCCGGGSTT-TCCT
T ss_pred ceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCCCCCeEEEeCCccCCCccCCCCcEEeccCCCC-CCCC
Confidence 4799999998 9999998 89999999999999999999999999999 6999999999999742 7999
Q ss_pred cccHHHHHHHHHHhhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHc
Q 033359 68 AITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQY 117 (121)
Q Consensus 68 ~~~i~~il~~i~~~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~ 117 (121)
+++|++||.+|+++|.+|+.+. .+..++++|.+.+++++.+.
T Consensus 139 ~~ti~~VL~sI~slL~~p~a~~--------~~~~~~~~Y~~~~~~~~~~~ 180 (186)
T 1zuo_A 139 AYSIESVIMQINATLVKGKARV--------QFGANKNQYNLARAQQSYNS 180 (186)
T ss_dssp TSCHHHHHHHHHHHHHHTTCEE--------CTTCCTTCCCHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHcCCChhH--------hhccCHHHHhHHHHHHHHHH
Confidence 9999999999999998886543 34445677777777777654
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.89 E-value=1.9e-24 Score=146.19 Aligned_cols=76 Identities=21% Similarity=0.408 Sum_probs=69.4
Q ss_pred CEeEEEecCCCCCCCCCC----------EEEEEEEcCCCCCCCCCcceecCC-CCcceeeCCCceeecCCCCC--CCCCC
Q 033359 1 MIWECIIPGKTGTDWEGG----------YFPLTLYFSEDYPSKPPKCKFPQG-FFHPNVYPSGTVCLSILNED--NGWRP 67 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg----------~f~~~i~f~~~yP~~pP~v~f~t~-i~Hpnv~~~G~ic~~~l~~~--~~W~p 67 (121)
++|.+++.||.||+|+|| .|+++|.||++||.+||+|+|.+. +||||||.+|+||++++... +.|.|
T Consensus 56 ~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~~~~~hpnmY~~G~ICLdIL~kp~Ws~~~P 135 (172)
T 2z6o_A 56 NDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHFKPLWARNVP 135 (172)
T ss_dssp CCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTTCSSBCTTSBBCCCTTHHHHHHHHTT
T ss_pred ceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCCCCCCCCCCCCCCcEechhhccccccccCC
Confidence 479999999999999999 999999999999999999999997 99999999999999999542 24559
Q ss_pred cccHHHHHH
Q 033359 68 AITVKQILV 76 (121)
Q Consensus 68 ~~~i~~il~ 76 (121)
.++|.++|.
T Consensus 136 ~~~IahiL~ 144 (172)
T 2z6o_A 136 KFGLAHLMA 144 (172)
T ss_dssp SCCHHHHHH
T ss_pred ccCHHHHHh
Confidence 999999984
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.82 E-value=2.3e-20 Score=126.79 Aligned_cols=84 Identities=24% Similarity=0.442 Sum_probs=74.2
Q ss_pred eEEEecCCCCCCCCCCE---EEEEEEcCCCCCCCCCcceecC-------C---CC-cceeeCCCceeecCCCCCCCCCC-
Q 033359 3 WECIIPGKTGTDWEGGY---FPLTLYFSEDYPSKPPKCKFPQ-------G---FF-HPNVYPSGTVCLSILNEDNGWRP- 67 (121)
Q Consensus 3 W~~~i~Gp~~tpy~gg~---f~~~i~f~~~yP~~pP~v~f~t-------~---i~-Hpnv~~~G~ic~~~l~~~~~W~p- 67 (121)
+-+.+.|.-.++|+||+ |.+.|.||++||++||.|.|.+ . ++ |||||.+|+||++.|. +|++
T Consensus 63 ~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~~~~~~I~~hpnVD~~G~I~lpyL~---~W~p~ 139 (162)
T 3r3q_A 63 LLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMNTISSSLPIQEYIDSNGWIALPILH---AWDPA 139 (162)
T ss_dssp EEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTTTSCTTSTHHHHBCTTSBBCCGGGG---SCCGG
T ss_pred eEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCccccccccccCCCCCCCCCCcEeCcccc---cCCCC
Confidence 45666777779999998 8899999999999999998865 1 77 9999999999999994 4999
Q ss_pred cccHHHHHHHHHHhhcCCCCCC
Q 033359 68 AITVKQILVGIQDLLDQPNPAD 89 (121)
Q Consensus 68 ~~~i~~il~~i~~~l~~p~~~~ 89 (121)
+.++.++|.+|+++|.+|+++.
T Consensus 140 ~s~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 140 AMNLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp GCCHHHHHHHHHHTTSCCCCCC
T ss_pred cCcHHHHHHHHHHHhcCCCCCC
Confidence 5799999999999999999875
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.66 E-value=1.9e-17 Score=109.95 Aligned_cols=62 Identities=24% Similarity=0.563 Sum_probs=57.6
Q ss_pred EeEEEecCCCCCCCCCC----------EEEEEEEcCCCCCCCCCcceecCC-CCcceeeCCCceeecCCCCCCCCCCc
Q 033359 2 IWECIIPGKTGTDWEGG----------YFPLTLYFSEDYPSKPPKCKFPQG-FFHPNVYPSGTVCLSILNEDNGWRPA 68 (121)
Q Consensus 2 ~W~~~i~Gp~~tpy~gg----------~f~~~i~f~~~yP~~pP~v~f~t~-i~Hpnv~~~G~ic~~~l~~~~~W~p~ 68 (121)
.|...+.||.||+|+|+ .|++++.||.+||.+||+|+|.+. .+||+++.+|+||++++ |+|.
T Consensus 59 dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~ldgkt~kmYr~GkICLdIh-----wkPl 131 (168)
T 3kpa_A 59 HWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPELEGKTVKMYRGGKICMTTH-----FFPL 131 (168)
T ss_dssp CCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTTCSSEETTTEECCCTT-----HHHH
T ss_pred CeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecccccCcCccccCCCcEEeccc-----cchh
Confidence 59999999999999999 999999999999999999999995 89999999999999985 6655
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.61 E-value=7.7e-16 Score=102.89 Aligned_cols=75 Identities=23% Similarity=0.499 Sum_probs=65.7
Q ss_pred CEeEEEecCCCCCCCCCCEEEE--EEEcCCCCCCCCCcceecCC------CCcceeeCCCceeecCCCCCCCCCC-cccH
Q 033359 1 MIWECIIPGKTGTDWEGGYFPL--TLYFSEDYPSKPPKCKFPQG------FFHPNVYPSGTVCLSILNEDNGWRP-AITV 71 (121)
Q Consensus 1 ~~W~~~i~Gp~~tpy~gg~f~~--~i~f~~~yP~~pP~v~f~t~------i~Hpnv~~~G~ic~~~l~~~~~W~p-~~~i 71 (121)
+.|.++|. .+|+|++|.+ .|.||++||++||.| |.++ ..|||||.+|+||++.|.. |++ ..+|
T Consensus 54 L~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~~G~i~lpyL~~---W~~~~snL 125 (146)
T 3obq_A 54 MNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDANGKIYLPYLHE---WKHPQSDL 125 (146)
T ss_dssp EEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCTTCBBCCHHHHT---CCTTTCCH
T ss_pred EEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCCCCCEecccccc---cCCCCCCH
Confidence 36788885 6899999995 899999999999999 6554 4899999999999999955 988 7899
Q ss_pred HHHHHHHHHhhc
Q 033359 72 KQILVGIQDLLD 83 (121)
Q Consensus 72 ~~il~~i~~~l~ 83 (121)
.+++..|++.|.
T Consensus 126 ~~ll~~l~~~F~ 137 (146)
T 3obq_A 126 LGLIQVMIVVFG 137 (146)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999999993
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.71 E-value=0.029 Score=35.63 Aligned_cols=24 Identities=25% Similarity=0.393 Sum_probs=20.2
Q ss_pred CCEEEEEEEcCCCCCCCCCcceec
Q 033359 17 GGYFPLTLYFSEDYPSKPPKCKFP 40 (121)
Q Consensus 17 gg~f~~~i~f~~~yP~~pP~v~f~ 40 (121)
.-.+.+.+.+|++||.+||.+...
T Consensus 54 ~~~~~L~v~~p~~YP~~~P~i~l~ 77 (128)
T 2ebm_A 54 TVQTTLKFTYSEKYPDEAPLYEIF 77 (128)
T ss_dssp CCBEEEEEECCSSTTTSCCEEEEE
T ss_pred ceeEEEEEEeCCCCCCCCceEEEE
Confidence 347789999999999999998753
No 57
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=94.64 E-value=0.19 Score=33.08 Aligned_cols=23 Identities=13% Similarity=0.077 Sum_probs=20.1
Q ss_pred EEEEEEEcCCCCCCCCCcceecC
Q 033359 19 YFPLTLYFSEDYPSKPPKCKFPQ 41 (121)
Q Consensus 19 ~f~~~i~f~~~yP~~pP~v~f~t 41 (121)
.+.+.|.+|.+||..+|.|...+
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~ 98 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRS 98 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEEC
T ss_pred eEEEEEEcCCCCCCCCCcEEEEe
Confidence 78899999999999999997543
No 58
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=94.06 E-value=0.18 Score=31.78 Aligned_cols=24 Identities=25% Similarity=0.505 Sum_probs=20.6
Q ss_pred CEEEEEEEcCCCCCCCCCcceecC
Q 033359 18 GYFPLTLYFSEDYPSKPPKCKFPQ 41 (121)
Q Consensus 18 g~f~~~i~f~~~yP~~pP~v~f~t 41 (121)
-.+.+.|.+|++||..+|.|...+
T Consensus 59 ~~~~L~~~~p~~YP~~~P~i~~~~ 82 (128)
T 2day_A 59 VCFTLVLQVPAEYPHEVPQISIRN 82 (128)
T ss_dssp CEEEEEEEECSSTTSSCCEEEEEE
T ss_pred eeEEEEEEcCCCCCCCCCCeEEEc
Confidence 377888999999999999997654
No 59
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=93.33 E-value=0.17 Score=32.34 Aligned_cols=24 Identities=21% Similarity=0.454 Sum_probs=20.3
Q ss_pred CEEEEEEEcCCCCCCCCCcceecC
Q 033359 18 GYFPLTLYFSEDYPSKPPKCKFPQ 41 (121)
Q Consensus 18 g~f~~~i~f~~~yP~~pP~v~f~t 41 (121)
-.+.+.+.+|++||..+|.|...+
T Consensus 62 ~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 62 SSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp CEEEEEEECCSSTTSSCCEEEEEC
T ss_pred eEEEEEEECCCCCCCCCCeEEEec
Confidence 467888999999999999997644
No 60
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.07 E-value=0.27 Score=31.06 Aligned_cols=23 Identities=22% Similarity=0.270 Sum_probs=19.9
Q ss_pred CEEEEEEEcCCCCCCCCCcceec
Q 033359 18 GYFPLTLYFSEDYPSKPPKCKFP 40 (121)
Q Consensus 18 g~f~~~i~f~~~yP~~pP~v~f~ 40 (121)
-.+.+.+.+|++||..+|.|...
T Consensus 56 ~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 56 IPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp CEEEEEEEECSSTTSSCCCCCCC
T ss_pred eEEEEEEECCCCCCCCCCeEEEE
Confidence 37889999999999999998754
No 61
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=92.49 E-value=0.41 Score=32.70 Aligned_cols=51 Identities=20% Similarity=0.377 Sum_probs=38.9
Q ss_pred CCEEEEEEEcCCCCCCCCCcceecCCCCcceeeCCCceeecCCCCCCCCCCcccHHHHHHHHHHhhc
Q 033359 17 GGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLD 83 (121)
Q Consensus 17 gg~f~~~i~f~~~yP~~pP~v~f~t~i~Hpnv~~~G~ic~~~l~~~~~W~p~~~i~~il~~i~~~l~ 83 (121)
|....++|.++.+||.++|.+...-+. |. .. .|++..++..++...+..+.
T Consensus 37 gR~H~l~v~l~~~yp~~~P~~~~DlP~--~~------------~~--~w~~~ssL~~v~~qF~~~Le 87 (186)
T 3zqs_A 37 GREHLITLKLKAKYPAESPDYFVDFPV--PF------------CA--SWTPQSSLISIYSQFLAAIE 87 (186)
T ss_dssp SCEEEEEEECCTTTTTSCCEEECCCSS--CC------------CC--CCCTTCCHHHHHHHHHHHHH
T ss_pred CCeEEEEEEECCCCCCCCCeeEEcCCC--Cc------------cc--ccCCCccHHHHHHHHHHHHH
Confidence 667788999999999999988655442 11 12 69999999999887777664
No 62
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=91.59 E-value=0.56 Score=30.53 Aligned_cols=23 Identities=22% Similarity=0.411 Sum_probs=19.8
Q ss_pred EEEEEEEcCCCCCCCCCcceecC
Q 033359 19 YFPLTLYFSEDYPSKPPKCKFPQ 41 (121)
Q Consensus 19 ~f~~~i~f~~~yP~~pP~v~f~t 41 (121)
.+.+.+.+|.+||..+|.|....
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~ 96 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRS 96 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEEC
T ss_pred eEEEEEECCCCCCCCCCeEEEEc
Confidence 57788999999999999997644
No 63
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=91.17 E-value=0.12 Score=32.93 Aligned_cols=23 Identities=17% Similarity=0.280 Sum_probs=19.9
Q ss_pred CEEEEEEEcCCCCCCCCCcceec
Q 033359 18 GYFPLTLYFSEDYPSKPPKCKFP 40 (121)
Q Consensus 18 g~f~~~i~f~~~yP~~pP~v~f~ 40 (121)
-.+.+.|.||++||..+|.|...
T Consensus 63 ~~~~L~v~~p~~YP~~~P~i~l~ 85 (137)
T 1ukx_A 63 VQVELRVKCPPTYPDVVPEIDLK 85 (137)
T ss_dssp CEEEEEECCCTTTTSSCCCCEEE
T ss_pred eEEEEEEECCCCCCCCCCcEEEe
Confidence 36889999999999999999763
No 64
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=89.82 E-value=0.061 Score=33.69 Aligned_cols=32 Identities=3% Similarity=-0.080 Sum_probs=0.0
Q ss_pred CCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcC
Q 033359 87 PADPAQTDGYQLFIQDPAEYKRRVRQQAKQYP 118 (121)
Q Consensus 87 ~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~ 118 (121)
...|.+.++|++|+++++.|...+|.|+.-+|
T Consensus 23 ~~~PQDA~VA~qy~~~~~~f~~TAr~WT~~~a 54 (108)
T 2cwb_A 23 TTEAVDAATAEKVFKQYANDNGVDGEWTYDDA 54 (108)
T ss_dssp --------------------------------
T ss_pred cCCchhHHHHHHHHhchhccccccccccccCc
Confidence 45688999999999999999999999996555
No 65
>3r45_C Holliday junction recognition protein; histone fold, centromere, CENP-A, histone chaperone, hjurp; 2.60A {Homo sapiens}
Probab=38.99 E-value=46 Score=19.09 Aligned_cols=29 Identities=14% Similarity=0.261 Sum_probs=24.3
Q ss_pred CHHHHHHHhhCHHHHHHHHHHHHHHcCCC
Q 033359 92 QTDGYQLFIQDPAEYKRRVRQQAKQYPPV 120 (121)
Q Consensus 92 n~~a~~~~~~~~~~f~~~~~~~~~k~~~~ 120 (121)
+...-+.+++++..|.+..++..+||.+|
T Consensus 16 d~~Ll~kLr~sr~RFQ~~Mq~lieKYn~P 44 (81)
T 3r45_C 16 DDQLLQKLRASRRRFQRRMQRLIEKYNQP 44 (81)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 44555677888999999999999999987
No 66
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=36.42 E-value=26 Score=24.01 Aligned_cols=24 Identities=13% Similarity=0.393 Sum_probs=20.0
Q ss_pred CCCEEEEEEEcCCCCCC-----CCCccee
Q 033359 16 EGGYFPLTLYFSEDYPS-----KPPKCKF 39 (121)
Q Consensus 16 ~gg~f~~~i~f~~~yP~-----~pP~v~f 39 (121)
+.|.|.|+-.+|--||. .||.|.|
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~ 137 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISL 137 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEE
Confidence 46899999999999997 6777755
No 67
>1zoq_C CREB-binding protein, interferon regulatory factor 3; transcription regulation, transferase, transcription/transferase complex; 2.37A {Homo sapiens} SCOP: a.153.1.1 PDB: 1jjs_A
Probab=36.10 E-value=28 Score=17.98 Aligned_cols=42 Identities=17% Similarity=0.347 Sum_probs=28.5
Q ss_pred HHHHHhhcCCCCCCC-cCHHHHHHHhhCHHHHHHHHHHHHHHcCC
Q 033359 76 VGIQDLLDQPNPADP-AQTDGYQLFIQDPAEYKRRVRQQAKQYPP 119 (121)
Q Consensus 76 ~~i~~~l~~p~~~~~-~n~~a~~~~~~~~~~f~~~~~~~~~k~~~ 119 (121)
..|..-+.+|. +| -+..+-..++.|+......+++-+.+|+.
T Consensus 4 qqLl~tlksp~--sp~qqqqvl~ILksnPqLMAAfIkQR~~~y~~ 46 (47)
T 1zoq_C 4 QDLLRTLKSPS--SPQQQQQVLNILKSNPQLMAAFIKQRTAKYVA 46 (47)
T ss_dssp HHHHHTCCSCC--CHHHHHHHHHHHHTCHHHHHHHHHHTTTCCCC
T ss_pred HHHHHHhcCCC--CHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcc
Confidence 33444445554 22 35566777889999999999988888864
No 68
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=31.20 E-value=41 Score=21.03 Aligned_cols=33 Identities=12% Similarity=0.078 Sum_probs=21.5
Q ss_pred eeeCCCceeecCCCCCCCCCCcccHHHHHHHHHHh
Q 033359 47 NVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDL 81 (121)
Q Consensus 47 nv~~~G~ic~~~l~~~~~W~p~~~i~~il~~i~~~ 81 (121)
-||++|+|-...+.. .+....++.+++..|++|
T Consensus 124 lID~~G~I~~~~~~~--~~~~~~~~~eil~~l~~L 156 (157)
T 4g2e_A 124 VIDKEGKVRYKWVSD--DPTKEPPYDEIEKVVKSL 156 (157)
T ss_dssp EECTTSBEEEEEEES--STTCCCCHHHHHHHHHHT
T ss_pred EECCCCEEEEEEECC--CCCCCCCHHHHHHHHHHh
Confidence 367889886655444 344445677888777765
No 69
>2f4m_B UV excision repair protein RAD23 homolog B; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: a.189.1.1 PDB: 2f4o_B*
Probab=30.96 E-value=54 Score=17.92 Aligned_cols=20 Identities=10% Similarity=0.094 Sum_probs=17.7
Q ss_pred cCHHHHHHHhhCHHHHHHHH
Q 033359 91 AQTDGYQLFIQDPAEYKRRV 110 (121)
Q Consensus 91 ~n~~a~~~~~~~~~~f~~~~ 110 (121)
.|++...+...|.++|.+..
T Consensus 37 ~nP~l~~~I~~n~e~Fl~ll 56 (61)
T 2f4m_B 37 ENPQLLQQISQHQEHFIQML 56 (61)
T ss_dssp HCHHHHHHHHHSHHHHHHHH
T ss_pred HCHHHHHHHHHCHHHHHHHH
Confidence 48999999999999998876
No 70
>1pve_A HHR23B, UV excision repair protein RAD23 homolog B; XPC binding domain, solution structure, nucleotide excision repair, chaps, DNA binding protein; NMR {Homo sapiens} SCOP: a.189.1.1
Probab=30.92 E-value=42 Score=19.07 Aligned_cols=21 Identities=10% Similarity=0.094 Sum_probs=18.8
Q ss_pred cCHHHHHHHhhCHHHHHHHHH
Q 033359 91 AQTDGYQLFIQDPAEYKRRVR 111 (121)
Q Consensus 91 ~n~~a~~~~~~~~~~f~~~~~ 111 (121)
.|+++.++...|.++|.+...
T Consensus 39 ~NPqL~q~I~~n~e~Fl~ll~ 59 (72)
T 1pve_A 39 ENPQLLQQISQHQEHFIQMLN 59 (72)
T ss_dssp TCHHHHHHHHTTHHHHHHHHH
T ss_pred HCHHHHHHHHHCHHHHHHHHc
Confidence 589999999999999998874
No 71
>1h3o_B Transcription initiation factor TFIID 20/15 kDa subunits; transcription/TBP-associated factors, TBP-associated factors; 2.3A {Homo sapiens} SCOP: a.22.1.3
Probab=30.31 E-value=53 Score=18.83 Aligned_cols=42 Identities=21% Similarity=0.340 Sum_probs=30.2
Q ss_pred HHHHhhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHHcC
Q 033359 77 GIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQYP 118 (121)
Q Consensus 77 ~i~~~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~~ 118 (121)
.|++++..-++...+++++..+..+=.+.|...+-..+.+.|
T Consensus 10 ~L~~Lv~~idp~~~ld~~vee~ll~lADdFV~~V~~~ac~lA 51 (76)
T 1h3o_B 10 KLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLA 51 (76)
T ss_dssp HHHHHHHHHCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555444566778999998888878888888777766543
No 72
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=30.10 E-value=32 Score=21.64 Aligned_cols=34 Identities=12% Similarity=0.174 Sum_probs=21.9
Q ss_pred eeeCCCceeecCCCCCCCCCCcccHHHHHHHHHHhh
Q 033359 47 NVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLL 82 (121)
Q Consensus 47 nv~~~G~ic~~~l~~~~~W~p~~~i~~il~~i~~~l 82 (121)
-||++|+|-...... ......+..+++..|..++
T Consensus 138 liD~~G~i~~~~~~~--~~~~~~~~~~ll~~l~~ll 171 (171)
T 2yzh_A 138 IIDKEGKVAYVQLVP--EITEEPNYDEVVNKVKELI 171 (171)
T ss_dssp EECTTSBEEEEEECS--BTTSCCCCHHHHHHHHHC-
T ss_pred EEcCCCeEEEEEeCC--CcCCCCCHHHHHHHHHhhC
Confidence 346789988776544 3334456778888887654
No 73
>2cu9_A Spcia1, histone chaperone CIA1; immunoglobulin fold, structural genomics, NPPSFA; 1.80A {Schizosaccharomyces pombe} SCOP: b.1.22.1 PDB: 2dze_A* 2z34_A 2z3f_A
Probab=29.22 E-value=71 Score=21.07 Aligned_cols=36 Identities=11% Similarity=0.121 Sum_probs=27.5
Q ss_pred CEeEEEecCCCCC-------------CCCCCEEEEEEEcCCCCCCCCCc
Q 033359 1 MIWECIIPGKTGT-------------DWEGGYFPLTLYFSEDYPSKPPK 36 (121)
Q Consensus 1 ~~W~~~i~Gp~~t-------------py~gg~f~~~i~f~~~yP~~pP~ 36 (121)
++|+++..|..++ |-.-|.++|.+.-+.=-+.+-|.
T Consensus 38 lewkliYVgSa~s~~~DQ~Ld~v~VGPi~~G~~kFv~~adpPd~~~IP~ 86 (161)
T 2cu9_A 38 LEWKLTYVGSATSQSYDQILDTLLVGPIPIGINKFVFEADPPNIDLLPQ 86 (161)
T ss_dssp EEEEEEEESSTTSCCCEEEEEEEEECSCCSEEEEEEEEECCCCGGGSSC
T ss_pred eEEEEEEEcCCCCccCCeEeeEEEECCccceEEEEEEEcCCCChhHCCC
Confidence 4799988887765 77789999999986556666555
No 74
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=29.09 E-value=59 Score=20.55 Aligned_cols=34 Identities=15% Similarity=0.176 Sum_probs=22.1
Q ss_pred eeeCCCceeecCCCCCCCCCCcccHHHHHHHHHHhh
Q 033359 47 NVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLL 82 (121)
Q Consensus 47 nv~~~G~ic~~~l~~~~~W~p~~~i~~il~~i~~~l 82 (121)
-||++|+|-...... ...-..++.++|..|+.+.
T Consensus 126 lID~~G~I~~~~~~~--~~~~~~~~~eil~~l~~l~ 159 (164)
T 4gqc_A 126 IVKPDGTVAYKWVTD--NPLNEPDYDEVVREANKIA 159 (164)
T ss_dssp EECTTSBEEEEEECS--CTTCCCCHHHHHHHHHHHH
T ss_pred EECCCCEEEEEEEeC--CCCCCCCHHHHHHHHHHHh
Confidence 467889887655544 2333346788888887765
No 75
>1roc_A Anti-silencing protein 1; beta-sandwich, replication, chaperone; 1.50A {Saccharomyces cerevisiae} SCOP: b.1.22.1 PDB: 2ygv_A
Probab=28.88 E-value=78 Score=20.73 Aligned_cols=35 Identities=11% Similarity=0.144 Sum_probs=25.2
Q ss_pred CEeEEEecCCCCC-------------CCCCCEEEEEEEcCCCCCCCCC
Q 033359 1 MIWECIIPGKTGT-------------DWEGGYFPLTLYFSEDYPSKPP 35 (121)
Q Consensus 1 ~~W~~~i~Gp~~t-------------py~gg~f~~~i~f~~~yP~~pP 35 (121)
++|+++..|.+++ |-.-|.++|.+.-+.=-|.+-|
T Consensus 39 lewkliYVgSa~s~~~DQ~Ld~v~vGPi~~G~~kFv~~adpPd~~~Ip 86 (155)
T 1roc_A 39 LEWKLTYVGSSRSLDHDQELDSILVGPVPVGVNKFVFSADPPSAELIP 86 (155)
T ss_dssp EEEEEEECCCTTSSCTTEEEEEEEECSCCSEEEEEEEEECCCCGGGCC
T ss_pred cEEEEEEEeCCCcccCceEeeEEEeccccceeEEEEEEcCCCCcccCC
Confidence 4799998887765 6778999999887553444433
No 76
>2i32_A Anti-silencing factor 1 paralog A; histone deposition, chromatin regulation, histone chaperones, ASF1, HIRA, CAF-1, replication chaperone; 2.70A {Homo sapiens} SCOP: b.1.22.1 PDB: 1tey_A 2iij_A 3aad_B
Probab=25.28 E-value=93 Score=20.94 Aligned_cols=35 Identities=17% Similarity=0.308 Sum_probs=26.9
Q ss_pred CEeEEEecCCCCC-------------CCCCCEEEEEEEcCCCCCCCCC
Q 033359 1 MIWECIIPGKTGT-------------DWEGGYFPLTLYFSEDYPSKPP 35 (121)
Q Consensus 1 ~~W~~~i~Gp~~t-------------py~gg~f~~~i~f~~~yP~~pP 35 (121)
++|+++..|..++ |-.-|.++|.+.-+.=-|.+-|
T Consensus 63 leWkliYVGSa~s~~~DQ~Ldsv~VGPi~~G~~kFvfeadpPd~~kIP 110 (182)
T 2i32_A 63 LEWKIIYVGSAESEEYDQVLDSVLVGPVPAGRHMFVFQADAPNPGLIP 110 (182)
T ss_dssp EEEEEEEESCSSCGGGEEEEEEEEECCCCSEEEEEEEEECCCCGGGSC
T ss_pred cEEEEEEEcCCCCccCCeEeeEEEECCccceEEEEEEEeCCCCcccCC
Confidence 4788888887765 7778999999998655555666
No 77
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=24.86 E-value=55 Score=20.28 Aligned_cols=34 Identities=9% Similarity=0.021 Sum_probs=22.3
Q ss_pred eeeCCCceeecCCCCCCCCCCcccHHHHHHHHHHhh
Q 033359 47 NVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLL 82 (121)
Q Consensus 47 nv~~~G~ic~~~l~~~~~W~p~~~i~~il~~i~~~l 82 (121)
-||++|+|-...... ......++..++..|..++
T Consensus 133 lid~~G~i~~~~~g~--~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 133 VLDENGKVVYAEYVS--EATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp EECTTSCEEEEEECS--BTTSCCCSHHHHHHHHHHH
T ss_pred EEcCCCcEEEEEecC--CcCCCCCHHHHHHHHHHhh
Confidence 346889987766544 3444446777887777765
No 78
>2hue_A Anti-silencing protein 1; mini beta sheet, elongated beta sandwhich, DNA binding prote; 1.70A {Saccharomyces cerevisiae} SCOP: b.1.22.1 PDB: 1wg3_A
Probab=23.29 E-value=1.1e+02 Score=20.48 Aligned_cols=35 Identities=11% Similarity=0.144 Sum_probs=25.7
Q ss_pred CEeEEEecCCCCC-------------CCCCCEEEEEEEcCCCCCCCCC
Q 033359 1 MIWECIIPGKTGT-------------DWEGGYFPLTLYFSEDYPSKPP 35 (121)
Q Consensus 1 ~~W~~~i~Gp~~t-------------py~gg~f~~~i~f~~~yP~~pP 35 (121)
++|+++..|..++ |-.-|+++|.+.-+.=-+.+-|
T Consensus 44 leWkliYVgSa~s~~~DQ~Ld~v~VGPi~~G~~kFv~~adpPd~~~IP 91 (175)
T 2hue_A 44 LEWKLTYVGSSRSLDHDQELDSILVGPVPVGVNKFVFSADPPSAELIP 91 (175)
T ss_dssp EEEEEEEESCTTCGGGEEEEEEEEECSCCSEEEEEEEEECCCCGGGSC
T ss_pred cEEEEEEEcCCCCccCCeEeeEEEECCccceeEEEEEEcCCCChhhCC
Confidence 4799988887765 7778999999988554444544
No 79
>1f53_A Yeast killer toxin-like protein; killer toxin-like protein,SKLP, crystallin family; NMR {Streptomyces SP} SCOP: b.11.1.4
Probab=23.13 E-value=29 Score=20.13 Aligned_cols=11 Identities=45% Similarity=1.071 Sum_probs=9.3
Q ss_pred CCCCCCCccee
Q 033359 29 DYPSKPPKCKF 39 (121)
Q Consensus 29 ~yP~~pP~v~f 39 (121)
.||..||+|+.
T Consensus 70 t~Pn~Pp~V~~ 80 (84)
T 1f53_A 70 TYPNRPPKVNS 80 (84)
T ss_dssp CCSSSCCCCCB
T ss_pred ecCCCCCcccE
Confidence 58999999875
No 80
>2idc_A Anti-silencing protein 1 and histone H3 chimera; IG-like fold, ASF1, chaperone, chromatin, repli chaperone complex; 2.20A {Saccharomyces cerevisiae}
Probab=22.54 E-value=1.2e+02 Score=20.36 Aligned_cols=33 Identities=9% Similarity=0.102 Sum_probs=24.4
Q ss_pred CEeEEEecCCCCC-------------CCCCCEEEEEEEcCCCCCCC
Q 033359 1 MIWECIIPGKTGT-------------DWEGGYFPLTLYFSEDYPSK 33 (121)
Q Consensus 1 ~~W~~~i~Gp~~t-------------py~gg~f~~~i~f~~~yP~~ 33 (121)
++|+++..|..++ |-.-|.++|.+.-+.=-|.+
T Consensus 40 leWkliYVgSa~s~~~DQ~Ldsv~VGPi~~G~~kFv~~adpPd~~~ 85 (179)
T 2idc_A 40 LEWKLTYVGSSRSLDHDQELDSILVGPVPVGVNKFVFSADPPSAEL 85 (179)
T ss_dssp EEEEEEECSCTTCGGGCEEEEEEEECSCCSEEEEEEEEECCCCGGG
T ss_pred cEEEEEEEcCCCcccCCeEeeEEEECCccceeEEEEEEcCCCCccc
Confidence 4799998887765 77789999999875433444
No 81
>2l3o_A Interleukin 3; cytokine; NMR {Mus musculus}
Probab=22.26 E-value=87 Score=19.67 Aligned_cols=48 Identities=15% Similarity=0.238 Sum_probs=33.1
Q ss_pred CCCcccHHHHHHHHHHhhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHHHH
Q 033359 65 WRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKQ 116 (121)
Q Consensus 65 W~p~~~i~~il~~i~~~l~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k 116 (121)
......|.+.|..++.+|--+.+++...+ .+-.|...|.++.+++.+.
T Consensus 61 ~qn~s~I~snLk~l~pcLPTatp~~~~~p----I~I~dl~DFrkKL~fYL~~ 108 (127)
T 2l3o_A 61 PEDRYVIKSNLQKLNACLPTSANDSALPG----VFIRDLDDFRKKLRFYMVH 108 (127)
T ss_dssp GGGGSCCHHHHHHHHHHSCCCCCSSCCCC----CCCSCHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHhccccCCCCCCcccCCC----eeeCcHHHHHHHHHHHHHH
Confidence 34456789999999999955544222111 1228899999999998764
No 82
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=21.83 E-value=94 Score=24.49 Aligned_cols=26 Identities=23% Similarity=0.271 Sum_probs=21.7
Q ss_pred CHHHHHHHhhCHHHHHHHHHHHHHHc
Q 033359 92 QTDGYQLFIQDPAEYKRRVRQQAKQY 117 (121)
Q Consensus 92 n~~a~~~~~~~~~~f~~~~~~~~~k~ 117 (121)
-.++.++..+|++.|.+.|+++..++
T Consensus 277 ~ee~~~l~~~dp~~~~~~~~~Sm~rh 302 (552)
T 2fkn_A 277 LDEADRLRQDTPELYVRLAKQSMKKH 302 (552)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 45677788899999999999988765
No 83
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=21.62 E-value=96 Score=24.44 Aligned_cols=26 Identities=23% Similarity=0.362 Sum_probs=21.7
Q ss_pred CHHHHHHHhhCHHHHHHHHHHHHHHc
Q 033359 92 QTDGYQLFIQDPAEYKRRVRQQAKQY 117 (121)
Q Consensus 92 n~~a~~~~~~~~~~f~~~~~~~~~k~ 117 (121)
-.++.++..+|++.|.+.|+++..++
T Consensus 276 ~ee~~~l~~~dp~~~~~~~~~Sm~rh 301 (551)
T 1x87_A 276 LDEAAELRARDPKQYIARAKQSIAAH 301 (551)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 45677788899999999999988765
No 84
>2k6w_A Putative uncharacterized protein TTHA1943; PCUA, copper transfer protein, metal transport; NMR {Thermus thermophilus} PDB: 2k6y_A 2k6z_A 2k70_A
Probab=21.58 E-value=96 Score=19.12 Aligned_cols=26 Identities=19% Similarity=0.270 Sum_probs=22.3
Q ss_pred eEEEecCCCCCCCCCCEEEEEEEcCC
Q 033359 3 WECIIPGKTGTDWEGGYFPLTLYFSE 28 (121)
Q Consensus 3 W~~~i~Gp~~tpy~gg~f~~~i~f~~ 28 (121)
.|+.++|.+..+=+|..+.+++.|-+
T Consensus 82 ~HvML~gl~~~l~~G~~v~ltL~Fe~ 107 (120)
T 2k6w_A 82 YHFMLLGLKRPLKAGEEVELDLLFAG 107 (120)
T ss_dssp EEEEEEEESSCBCTTCEEEEEEEETT
T ss_pred eEEEEeCCCCCCCCCCEEEEEEEECC
Confidence 47888898888889999999999965
No 85
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=21.34 E-value=97 Score=24.43 Aligned_cols=26 Identities=12% Similarity=-0.001 Sum_probs=21.7
Q ss_pred CHHHHHHHhhCHHHHHHHHHHHHHHc
Q 033359 92 QTDGYQLFIQDPAEYKRRVRQQAKQY 117 (121)
Q Consensus 92 n~~a~~~~~~~~~~f~~~~~~~~~k~ 117 (121)
-.++.++..+|++.|.+.|+++..++
T Consensus 281 ~ee~~~l~~~dp~~~~~~~~~Sm~rh 306 (557)
T 1uwk_A 281 WEQYRDRAQTEPAAVVKAAKQSMAVH 306 (557)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 45777788899999999999988765
No 86
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=20.98 E-value=1.9e+02 Score=19.23 Aligned_cols=39 Identities=15% Similarity=0.340 Sum_probs=27.9
Q ss_pred EeEEEecCCCCCCCCCCEEEEEEEcCCCCCCCCCcceecCC
Q 033359 2 IWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQG 42 (121)
Q Consensus 2 ~W~~~i~Gp~~tpy~gg~f~~~i~f~~~yP~~pP~v~f~t~ 42 (121)
+|.+-+.|+.+.--..-+=++...+.+.||. |.-.+..+
T Consensus 34 ~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~P 72 (175)
T 3rls_A 34 LWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEAP 72 (175)
T ss_dssp EEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECSS
T ss_pred EEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeCC
Confidence 6999999987765544566788889898975 55445443
No 87
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=20.13 E-value=42 Score=23.55 Aligned_cols=25 Identities=24% Similarity=0.619 Sum_probs=20.3
Q ss_pred CCCEEEEEEEcCCCCC-------CCCCcceec
Q 033359 16 EGGYFPLTLYFSEDYP-------SKPPKCKFP 40 (121)
Q Consensus 16 ~gg~f~~~i~f~~~yP-------~~pP~v~f~ 40 (121)
+.|.|.|+-.+|--|| ..||.|.|.
T Consensus 134 ~~G~y~F~TI~Pg~Yp~~~~~~~~RpaHIH~~ 165 (241)
T 2bum_B 134 DNGYYVFRTIKPGPYPWRNRINEWRPAHIHFS 165 (241)
T ss_dssp TTSEEEEEEECCCCEEESSSTTEEECSEEEEE
T ss_pred CCceEEEEEecCCccccCCCCCCCcCceEEEE
Confidence 4699999999999998 368887653
Done!