BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033360
MLIYPRMMAVHTLFSEEADGSLTTPIIPLTSEHITEDGIFLLENGEDALIYIGDRVNSYI
LDQLFGISLTRFSPQVVFVHGSGPITPMSVSYSSFDLDGSCLVLTESLHFTDYESEYSYR
I

High Scoring Gene Products

Symbol, full name Information P value
CEF
AT3G44340
protein from Arabidopsis thaliana 4.7e-13
gho
ghost
protein from Drosophila melanogaster 2.4e-05
sec-24.2 gene from Caenorhabditis elegans 0.00018
PF13_0324
Sec24 subunit, putative
gene from Plasmodium falciparum 0.00022
PF13_0324
Sec24 subunit, putative
protein from Plasmodium falciparum 3D7 0.00022
sec24d
SEC24 family, member D (S. cerevisiae)
gene_product from Danio rerio 0.00050

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033360
        (121 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2100202 - symbol:CEF "AT3G44340" species:3702 ...   185  4.7e-13   1
FB|FBgn0262126 - symbol:gho "ghost" species:7227 "Drosoph...   113  2.4e-05   1
WB|WBGene00004756 - symbol:sec-24.2 species:6239 "Caenorh...   104  0.00018   1
GENEDB_PFALCIPARUM|PF13_0324 - symbol:PF13_0324 "Sec24 su...   103  0.00022   1
UNIPROTKB|C0H5J6 - symbol:PF13_0324 "Sec24 subunit, putat...   103  0.00022   1
ASPGD|ASPL0000039645 - symbol:AN3080 species:162425 "Emer...   101  0.00039   1
ZFIN|ZDB-GENE-070117-2501 - symbol:sec24d "SEC24 family, ...   100  0.00050   1


>TAIR|locus:2100202 [details] [associations]
            symbol:CEF "AT3G44340" species:3702 "Arabidopsis
            thaliana" [GO:0005215 "transporter activity" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0006886 "intracellular
            protein transport" evidence=IEA] [GO:0006888 "ER to Golgi
            vesicle-mediated transport" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
            evidence=ISS] [GO:0030127 "COPII vesicle coat" evidence=IEA]
            [GO:0006979 "response to oxidative stress" evidence=IEP]
            [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR006895
            InterPro:IPR006896 InterPro:IPR006900 Pfam:PF04810 Pfam:PF04811
            Pfam:PF04815 GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0006886 GO:GO:0000139 GO:GO:0006979 GO:GO:0005789
            GO:GO:0008270 InterPro:IPR007123 Pfam:PF00626 GO:GO:0006888
            EMBL:AL138641 GO:GO:0033116 GO:GO:0030127 SUPFAM:SSF82919
            InterPro:IPR012990 Pfam:PF08033 SUPFAM:SSF81811 eggNOG:COG5028
            HOGENOM:HOG000196365 KO:K14007 EMBL:AJ251579 IPI:IPI00541098
            PIR:T47424 RefSeq:NP_566869.1 UniGene:At.22773
            ProteinModelPortal:Q9M291 STRING:Q9M291 PaxDb:Q9M291 PRIDE:Q9M291
            ProMEX:Q9M291 GeneID:823559 KEGG:ath:AT3G44340 TAIR:At3g44340
            InParanoid:Q9M291 OMA:NSMMPGP Genevestigator:Q9M291 Uniprot:Q9M291
        Length = 1096

 Score = 185 (70.2 bits), Expect = 4.7e-13, P = 4.7e-13
 Identities = 34/66 (51%), Positives = 50/66 (75%)

Query:     2 LIYPRMMAVHTLFSEEADGSLTTPIIPLTSEHITEDGIFLLENGEDALIYIGDRVNSYIL 61
             L+YPRM+AVH L + + + ++    IPL SEH++++G++ LENGED LIYIG+ VNS IL
Sbjct:   946 LVYPRMIAVHDLDANDNEENVVPCPIPLQSEHLSDEGVYFLENGEDGLIYIGESVNSDIL 1005

Query:    62 DQLFGI 67
              +LF +
Sbjct:  1006 QKLFNV 1011


>FB|FBgn0262126 [details] [associations]
            symbol:gho "ghost" species:7227 "Drosophila melanogaster"
            [GO:0004252 "serine-type endopeptidase activity" evidence=ISS]
            [GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
            [GO:0006886 "intracellular protein transport" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030127 "COPII
            vesicle coat" evidence=IEA] [GO:0005811 "lipid particle"
            evidence=IDA] [GO:0035158 "regulation of tube diameter, open
            tracheal system" evidence=IMP] [GO:0009306 "protein secretion"
            evidence=IMP] [GO:0035151 "regulation of tube size, open tracheal
            system" evidence=IMP] [GO:0070971 "endoplasmic reticulum exit site"
            evidence=IDA] [GO:0003331 "positive regulation of extracellular
            matrix constituent secretion" evidence=IMP] [GO:0007029
            "endoplasmic reticulum organization" evidence=IMP] [GO:0048081
            "positive regulation of cuticle pigmentation" evidence=IMP]
            [GO:0030011 "maintenance of cell polarity" evidence=IMP]
            [GO:0007030 "Golgi organization" evidence=IMP] [GO:0016203 "muscle
            attachment" evidence=IMP] [GO:0035149 "lumen formation, open
            tracheal system" evidence=IMP] [GO:0034394 "protein localization to
            cell surface" evidence=IMP] [GO:0040003 "chitin-based cuticle
            development" evidence=IMP] [GO:0022409 "positive regulation of
            cell-cell adhesion" evidence=IMP] [GO:0008360 "regulation of cell
            shape" evidence=IMP] [GO:0071711 "basement membrane organization"
            evidence=IMP] [GO:0000902 "cell morphogenesis" evidence=IMP]
            InterPro:IPR006895 InterPro:IPR006896 InterPro:IPR006900
            Pfam:PF04810 Pfam:PF04811 Pfam:PF04815 GO:GO:0006886 EMBL:AE014134
            GO:GO:0008360 GO:GO:0005811 GO:GO:0008270 GO:GO:0009306
            GO:GO:0016787 GO:GO:0016203 GO:GO:0000902 InterPro:IPR007123
            Pfam:PF00626 GO:GO:0006888 GO:GO:0040003 GO:GO:0034394
            GO:GO:0003331 GO:GO:0071711 GO:GO:0007030 GO:GO:0007029
            GO:GO:0030011 GO:GO:0035158 GO:GO:0022409 GO:GO:0035149
            GO:GO:0030127 SUPFAM:SSF82919 GO:GO:0070971 InterPro:IPR012990
            Pfam:PF08033 SUPFAM:SSF81811 eggNOG:COG5028 KO:K14007
            GeneTree:ENSGT00590000082962 HSSP:P40482 OMA:QDQGNCN GO:GO:0048081
            EMBL:AY052042 RefSeq:NP_608664.2 UniGene:Dm.269 SMR:Q9VQ94
            IntAct:Q9VQ94 MINT:MINT-283494 STRING:Q9VQ94
            EnsemblMetazoa:FBtr0077810 EnsemblMetazoa:FBtr0329964 GeneID:33409
            KEGG:dme:Dmel_CG10882 UCSC:CG10882-RA CTD:33409 FlyBase:FBgn0262126
            InParanoid:Q9VQ94 OrthoDB:EOG4CVDNW GenomeRNAi:33409 NextBio:783418
            Uniprot:Q9VQ94
        Length = 1193

 Score = 113 (44.8 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 22/65 (33%), Positives = 37/65 (56%)

Query:     3 IYPRMMAVHTLFSEEADGSLTTPIIPLTSEHITEDGIFLLENGEDALIYIGDRVNSYILD 62
             +YPR + +H +  EE D  L TP+   T E   EDG ++LENG    +++G  ++   + 
Sbjct:  1047 LYPRFIPIHNVVPEETD--LPTPV-RCTHEKTQEDGAYILENGVHLFVWLGQALSPDFVQ 1103

Query:    63 QLFGI 67
              +FG+
Sbjct:  1104 SVFGV 1108


>WB|WBGene00004756 [details] [associations]
            symbol:sec-24.2 species:6239 "Caenorhabditis elegans"
            [GO:0006886 "intracellular protein transport" evidence=IEA]
            [GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030127 "COPII
            vesicle coat" evidence=IEA] [GO:0009792 "embryo development ending
            in birth or egg hatching" evidence=IMP] [GO:0040010 "positive
            regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
            larval development" evidence=IMP] [GO:0010171 "body morphogenesis"
            evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0071688
            "striated muscle myosin thick filament assembly" evidence=IMP]
            [GO:0048477 "oogenesis" evidence=IMP] [GO:0032940 "secretion by
            cell" evidence=IMP] InterPro:IPR006895 InterPro:IPR006896
            InterPro:IPR006900 Pfam:PF04810 Pfam:PF04811 Pfam:PF04815
            GO:GO:0009792 GO:GO:0040010 GO:GO:0006886 GO:GO:0002119
            GO:GO:0008270 GO:GO:0071688 GO:GO:0010171 GO:GO:0040011
            GO:GO:0048477 InterPro:IPR007123 Pfam:PF00626 GO:GO:0006888
            GO:GO:0030127 SUPFAM:SSF82919 InterPro:IPR012990 Pfam:PF08033
            SUPFAM:SSF81811 eggNOG:COG5028 HOGENOM:HOG000196365 KO:K14007
            OMA:EDPFYKQ GeneTree:ENSGT00590000082962 HSSP:P40482 EMBL:Z68753
            PIR:H88859 PIR:T27631 RefSeq:NP_502354.2 ProteinModelPortal:Q23368
            SMR:Q23368 IntAct:Q23368 MINT:MINT-6670310 STRING:Q23368
            PaxDb:Q23368 EnsemblMetazoa:ZC518.2.1 EnsemblMetazoa:ZC518.2.2
            GeneID:178183 KEGG:cel:CELE_ZC518.2 UCSC:ZC518.2 CTD:178183
            WormBase:ZC518.2 InParanoid:Q23368 NextBio:900066 Uniprot:Q23368
        Length = 984

 Score = 104 (41.7 bits), Expect = 0.00018, P = 0.00018
 Identities = 23/66 (34%), Positives = 36/66 (54%)

Query:     3 IYPRMMAVHTLFSEEADGSLTTPIIPLTSEHITEDGIFLLENGEDALIYIGDRVNSYILD 62
             IYPR+  ++ L S   D S   P +PL+ EHI+  G++L+  G  A +Y+    +   L 
Sbjct:   841 IYPRLYRLNELASMPEDQS--PPALPLSFEHISRGGVYLMITGTIAFVYVASSADPGFLV 898

Query:    63 QLFGIS 68
              +FG S
Sbjct:   899 NVFGTS 904


>GENEDB_PFALCIPARUM|PF13_0324 [details] [associations]
            symbol:PF13_0324 "Sec24 subunit, putative"
            species:5833 "Plasmodium falciparum" [GO:0008565 "protein
            transporter activity" evidence=ISS] InterPro:IPR006895
            InterPro:IPR006896 InterPro:IPR006900 Pfam:PF04810 Pfam:PF04811
            Pfam:PF04815 GO:GO:0006886 GO:GO:0008565 GO:GO:0008270
            InterPro:IPR007123 Pfam:PF00626 GO:GO:0006888 EMBL:AL844509
            GO:GO:0030127 SUPFAM:SSF82919 InterPro:IPR012990 Pfam:PF08033
            SUPFAM:SSF81811 RefSeq:XP_002809093.1 ProteinModelPortal:C0H5J6
            PRIDE:C0H5J6 EnsemblProtists:PF13_0324:mRNA GeneID:814285
            KEGG:pfa:PF13_0324 EuPathDB:PlasmoDB:PF3D7_1361100
            HOGENOM:HOG000246453 ProtClustDB:CLSZ2433428 Uniprot:C0H5J6
        Length = 940

 Score = 103 (41.3 bits), Expect = 0.00022, P = 0.00022
 Identities = 21/69 (30%), Positives = 42/69 (60%)

Query:     4 YPRMMAVHTLFSE----EADGSLTTP-IIPLTSEHITEDGIFLLENGEDALIYIGDRVNS 58
             YPRM ++H L       + + ++  P  + LT E++T+DG +++E+GE  +++IG  +N 
Sbjct:   770 YPRMFSLHNLEKHHGHLDENNNIVFPDALNLTCENMTQDGCYIVEDGETIVMWIGRSINP 829

Query:    59 YILDQLFGI 67
               +  +FG+
Sbjct:   830 QWIYAVFGV 838


>UNIPROTKB|C0H5J6 [details] [associations]
            symbol:PF13_0324 "Sec24 subunit, putative" species:36329
            "Plasmodium falciparum 3D7" [GO:0008565 "protein transporter
            activity" evidence=ISS] InterPro:IPR006895 InterPro:IPR006896
            InterPro:IPR006900 Pfam:PF04810 Pfam:PF04811 Pfam:PF04815
            GO:GO:0006886 GO:GO:0008565 GO:GO:0008270 InterPro:IPR007123
            Pfam:PF00626 GO:GO:0006888 EMBL:AL844509 GO:GO:0030127
            SUPFAM:SSF82919 InterPro:IPR012990 Pfam:PF08033 SUPFAM:SSF81811
            RefSeq:XP_002809093.1 ProteinModelPortal:C0H5J6 PRIDE:C0H5J6
            EnsemblProtists:PF13_0324:mRNA GeneID:814285 KEGG:pfa:PF13_0324
            EuPathDB:PlasmoDB:PF3D7_1361100 HOGENOM:HOG000246453
            ProtClustDB:CLSZ2433428 Uniprot:C0H5J6
        Length = 940

 Score = 103 (41.3 bits), Expect = 0.00022, P = 0.00022
 Identities = 21/69 (30%), Positives = 42/69 (60%)

Query:     4 YPRMMAVHTLFSE----EADGSLTTP-IIPLTSEHITEDGIFLLENGEDALIYIGDRVNS 58
             YPRM ++H L       + + ++  P  + LT E++T+DG +++E+GE  +++IG  +N 
Sbjct:   770 YPRMFSLHNLEKHHGHLDENNNIVFPDALNLTCENMTQDGCYIVEDGETIVMWIGRSINP 829

Query:    59 YILDQLFGI 67
               +  +FG+
Sbjct:   830 QWIYAVFGV 838


>ASPGD|ASPL0000039645 [details] [associations]
            symbol:AN3080 species:162425 "Emericella nidulans"
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006888 "ER to
            Golgi vesicle-mediated transport" evidence=IEA] [GO:0030127 "COPII
            vesicle coat" evidence=IEA] [GO:0006886 "intracellular protein
            transport" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            InterPro:IPR006895 InterPro:IPR006896 InterPro:IPR006900
            Pfam:PF04810 Pfam:PF04811 Pfam:PF04815 GO:GO:0006886 GO:GO:0008270
            EMBL:BN001306 InterPro:IPR007123 Pfam:PF00626 GO:GO:0006888
            GO:GO:0030127 SUPFAM:SSF82919 InterPro:IPR012990 Pfam:PF08033
            SUPFAM:SSF81811 HOGENOM:HOG000196365 EnsemblFungi:CADANIAT00009998
            OMA:QDQGNCN Uniprot:C8VIP2
        Length = 1031

 Score = 101 (40.6 bits), Expect = 0.00039, P = 0.00039
 Identities = 25/83 (30%), Positives = 45/83 (54%)

Query:     1 MLIYPRMMAVHTLFSEEA----DGSLTTP-IIPLTSEHITEDGIFLLENGEDALIYIGDR 55
             + +YPR++ +H +  E+      G L  P  +  +   I E G +L+++G+  L++I  +
Sbjct:   846 LYLYPRIIPIHNMQPEDGFPNEQGQLQVPPSLRASFSKIEEGGAYLVDDGQQCLLWIHAQ 905

Query:    56 VNSYILDQLFG---ISLTRFSPQ 75
             V+  +L+ LFG    SL   SPQ
Sbjct:   906 VSPNLLEDLFGPGQTSLQELSPQ 928


>ZFIN|ZDB-GENE-070117-2501 [details] [associations]
            symbol:sec24d "SEC24 family, member D (S.
            cerevisiae)" species:7955 "Danio rerio" [GO:0030127 "COPII vesicle
            coat" evidence=IEA] [GO:0006886 "intracellular protein transport"
            evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
            transport" evidence=IEA] [GO:0070278 "extracellular matrix
            constituent secretion" evidence=IMP] [GO:0048703 "embryonic
            viscerocranium morphogenesis" evidence=IMP] [GO:0060536 "cartilage
            morphogenesis" evidence=IMP] InterPro:IPR006895 InterPro:IPR006896
            InterPro:IPR006900 Pfam:PF04810 Pfam:PF04811 Pfam:PF04815
            ZFIN:ZDB-GENE-070117-2501 GO:GO:0006886 GO:GO:0008270
            InterPro:IPR007123 Pfam:PF00626 GO:GO:0006888 GO:GO:0048703
            GO:GO:0060536 GO:GO:0030127 GO:GO:0070278 InterPro:IPR012990
            Pfam:PF08033 SUPFAM:SSF81811 GeneTree:ENSGT00590000082962
            EMBL:CABZ01087345 EMBL:CABZ01087346 EMBL:CABZ01112895
            EMBL:CABZ01112896 EMBL:CABZ01117105 EMBL:CABZ01117106
            IPI:IPI00968580 Ensembl:ENSDART00000058763 Bgee:F1R3A4
            Uniprot:F1R3A4
        Length = 1029

 Score = 100 (40.3 bits), Expect = 0.00050, P = 0.00050
 Identities = 20/67 (29%), Positives = 39/67 (58%)

Query:     1 MLIYPRMMAVHTLFSEEADGSLTTPIIPLTSEHITEDGIFLLENGEDALIYIGDRVNSYI 60
             +L+YPR++ +HT+  + +  SL   +   + E + E G+FLLENG    +++G   +  +
Sbjct:   880 VLLYPRLIPLHTM--DVSSESLPAAV-RCSEERLNESGMFLLENGLSMFLWLGQACSPDL 936

Query:    61 LDQLFGI 67
             +  LF +
Sbjct:   937 IQNLFNV 943


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.139   0.403    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      121       121   0.00091  102 3  11 22  0.49    30
                                                     29  0.49    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  525 (56 KB)
  Total size of DFA:  111 KB (2076 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.35u 0.10s 13.45t   Elapsed:  00:00:01
  Total cpu time:  13.35u 0.10s 13.45t   Elapsed:  00:00:01
  Start:  Sat May 11 00:30:39 2013   End:  Sat May 11 00:30:40 2013

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