BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033360
(121 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M081|SC24B_ARATH Protein transport protein Sec24-like At4g32640 OS=Arabidopsis
thaliana GN=At4g32640 PE=1 SV=3
Length = 1080
Score = 81.3 bits (199), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/67 (50%), Positives = 53/67 (79%)
Query: 2 LIYPRMMAVHTLFSEEADGSLTTPIIPLTSEHITEDGIFLLENGEDALIYIGDRVNSYIL 61
L+YPRM++VH L ++ +GS+ P IPL+SEHI+ +G++ LENGED L+++G+ V+S IL
Sbjct: 931 LVYPRMISVHDLDVKDTEGSVLPPPIPLSSEHISNEGVYFLENGEDGLLFVGESVDSDIL 990
Query: 62 DQLFGIS 68
+LF +S
Sbjct: 991 QKLFAVS 997
>sp|Q9M291|SC24C_ARATH Protein transport protein Sec24-like CEF OS=Arabidopsis thaliana
GN=CEF PE=1 SV=3
Length = 1096
Score = 76.6 bits (187), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/66 (51%), Positives = 50/66 (75%)
Query: 2 LIYPRMMAVHTLFSEEADGSLTTPIIPLTSEHITEDGIFLLENGEDALIYIGDRVNSYIL 61
L+YPRM+AVH L + + + ++ IPL SEH++++G++ LENGED LIYIG+ VNS IL
Sbjct: 946 LVYPRMIAVHDLDANDNEENVVPCPIPLQSEHLSDEGVYFLENGEDGLIYIGESVNSDIL 1005
Query: 62 DQLFGI 67
+LF +
Sbjct: 1006 QKLFNV 1011
>sp|A2QSG6|SEC24_ASPNC Protein transport protein sec24 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=sec24 PE=3 SV=1
Length = 919
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 3 IYPRMMAVHTL-----FSEEADGS-LTTPIIPLTSEHITEDGIFLLENGEDALIYIGDRV 56
IYP+M ++H + +E G L P I L+SE I G++L+++G+ +++G
Sbjct: 761 IYPKMYSLHDMPDTAGLPDEQTGEILLPPPINLSSERIVPYGLYLIDDGQTQFLWVGRDA 820
Query: 57 NSYILDQLFGI 67
+++ +FG+
Sbjct: 821 VPQLIEDVFGL 831
>sp|P0CR40|SEC24_CRYNJ Protein transport protein SEC24 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=SEC24 PE=3 SV=1
Length = 920
Score = 38.5 bits (88), Expect = 0.011, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 3 IYPRMMAVHTLFSEEA-----DGSLT-TPIIPLTSEHITEDGIFLLENGEDALIYIGDRV 56
I+PR ++H + E DG++ P + LTSE + G+FL+E+G++ +++G
Sbjct: 763 IHPRFYSLHNMPPEAGTIGGDDGAMILPPALNLTSEKLERHGLFLIEDGQNIFLWVGHDA 822
Query: 57 NSYILDQLFGIS 68
++ +F ++
Sbjct: 823 VPRLIQDVFDLA 834
>sp|P0CR41|SEC24_CRYNB Protein transport protein SEC24 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=SEC24 PE=3
SV=1
Length = 920
Score = 38.5 bits (88), Expect = 0.011, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 3 IYPRMMAVHTLFSEEA-----DGSLT-TPIIPLTSEHITEDGIFLLENGEDALIYIGDRV 56
I+PR ++H + E DG++ P + LTSE + G+FL+E+G++ +++G
Sbjct: 763 IHPRFYSLHNMPPEAGTIGGDDGAMILPPALNLTSEKLERHGLFLIEDGQNIFLWVGHDA 822
Query: 57 NSYILDQLFGIS 68
++ +F ++
Sbjct: 823 VPRLIQDVFDLA 834
>sp|A1DP06|SEC24_NEOFI Protein transport protein SEC24 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=sec24
PE=3 SV=1
Length = 919
Score = 38.5 bits (88), Expect = 0.012, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 3 IYPRMMAVHTL-----FSEEADGSLT-TPIIPLTSEHITEDGIFLLENGEDALIYIG-DR 55
IYP+M ++H + +E G + P I L+SE I G++L+++G+ +++G D
Sbjct: 761 IYPKMYSLHDMPDNAGLPDEQTGEIVLPPPINLSSERIVPYGLYLIDDGQTQFLWVGRDA 820
Query: 56 VNSYILDQLFGI 67
V +LD +FG+
Sbjct: 821 VPQLLLD-VFGL 831
>sp|A1CUC3|SEC24_ASPCL Protein transport protein sec24 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=sec24 PE=3 SV=1
Length = 919
Score = 38.5 bits (88), Expect = 0.013, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 8/73 (10%)
Query: 3 IYPRMMAVHTL-----FSEEADGSLT-TPIIPLTSEHITEDGIFLLENGEDALIYIG-DR 55
IYP+M ++H + +E G + P + L+SE I G++L+++G+ +++G D
Sbjct: 761 IYPKMYSLHDMPDNAGLPDEQTGEIVLPPPVNLSSERIVPYGLYLIDDGQTQFLWVGRDA 820
Query: 56 VNSYILDQLFGIS 68
V +LD +FG++
Sbjct: 821 VPQLLLD-VFGLA 832
>sp|Q5B6W0|SEC24_EMENI Protein transport protein sec24 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=sec24
PE=3 SV=1
Length = 908
Score = 38.5 bits (88), Expect = 0.014, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 3 IYPRMMAVHTL-----FSEEADGSLT-TPIIPLTSEHITEDGIFLLENGEDALIYIG-DR 55
IYP+M ++H + +E G + P I L+SE I G++L+++G+ +++G D
Sbjct: 750 IYPKMYSLHDMPDNAGLPDEQTGEIVLPPPINLSSERIVPYGLYLIDDGQTQFLWVGRDA 809
Query: 56 VNSYILDQLFGI 67
V +LD +FG+
Sbjct: 810 VPQLLLD-VFGL 820
>sp|Q4WLP1|SEC24_ASPFU Protein transport protein sec24 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=sec24 PE=3 SV=2
Length = 919
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 3 IYPRMMAVHTL-----FSEEADGSLT-TPIIPLTSEHITEDGIFLLENGEDALIYIG-DR 55
IYP+M ++H + +E G + P + L+SE I G++L+++G+ +++G D
Sbjct: 761 IYPKMYSLHDMPDIAGLPDEQTGEIVLPPPVNLSSERIVPYGLYLIDDGQTQFLWVGRDA 820
Query: 56 VNSYILDQLFGI 67
V +LD +FG+
Sbjct: 821 VPQLLLD-VFGL 831
>sp|Q0CSL7|SEC24_ASPTN Protein transport protein sec24 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=sec24 PE=3 SV=1
Length = 904
Score = 37.7 bits (86), Expect = 0.022, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 3 IYPRMMAVHTL-----FSEEADGSLT-TPIIPLTSEHITEDGIFLLENGEDALIYIG-DR 55
IYP+M ++H + +E G + P + L+SE + G++L+++G+ +++G D
Sbjct: 746 IYPKMYSLHDMPDVAGLPDEKTGEIVLPPPVNLSSERVVPYGLYLIDDGQTQFLWVGRDA 805
Query: 56 VNSYILDQLFGI 67
V +LD +FG+
Sbjct: 806 VPQLVLD-VFGL 816
>sp|Q2ULI0|SEC24_ASPOR Protein transport protein sec24 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=sec24 PE=3 SV=1
Length = 913
Score = 37.0 bits (84), Expect = 0.033, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 3 IYPRMMAVHTL-----FSEEADGSLT-TPIIPLTSEHITEDGIFLLENGEDALIYIG-DR 55
IYP+M ++H + +E G + P + L+SE + G++L+++G+ +++G D
Sbjct: 755 IYPKMYSLHDMPDNAGLPDEQTGEIVLPPPVNLSSERVVPYGLYLIDDGQTQFLWVGRDA 814
Query: 56 VNSYILDQLFGI 67
V I+D +FG+
Sbjct: 815 VPQLIVD-VFGL 825
>sp|P53992|SC24C_HUMAN Protein transport protein Sec24C OS=Homo sapiens GN=SEC24C PE=1 SV=3
Length = 1094
Score = 36.6 bits (83), Expect = 0.053, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 1 MLIYPRMMAVHTLFSEEADGSLTTPIIPLTSEHITEDGIFLLENGEDALIYIGDRVNSYI 60
+ YPR++ L + + P + + E ++ I+LLENG + +++G V +
Sbjct: 945 VFFYPRLLP---LTKSPVESTTEPPAVRASEERLSNGDIYLLENGLNLFLWVGASVQQGV 1001
Query: 61 LDQLFGIS 68
+ LF +S
Sbjct: 1002 VQSLFSVS 1009
>sp|A6QNT8|SC24A_BOVIN Protein transport protein Sec24A OS=Bos taurus GN=SEC24A PE=2 SV=1
Length = 1099
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 25 PIIPLTSEHITEDGIFLLENGEDALIYIGDRVNSYILDQLFGISLTRFSPQVV 77
PI+ L+ E ++ DG FL++ G ++++G L Q+ G+ PQ +
Sbjct: 975 PILQLSVEKLSRDGAFLMDAGSVLMLWVGRNCGQNFLSQVLGVENYALIPQTM 1027
>sp|Q1E6U9|SEC24_COCIM Protein transport protein SEC24 OS=Coccidioides immitis (strain RS)
GN=SEC24 PE=3 SV=2
Length = 932
Score = 36.2 bits (82), Expect = 0.058, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 3 IYPRMMAVHTL-----FSEEADGSLT-TPIIPLTSEHITEDGIFLLENGEDALIYIGDRV 56
IYP+M ++H + + A G + P+ LTSE + G++L+++G+ +++G
Sbjct: 772 IYPKMYSLHDMPDDAGVPDPATGEIVLPPLCNLTSERLVPYGLYLIDDGQTQFLWVGRDA 831
Query: 57 NSYILDQLFG 66
++ +FG
Sbjct: 832 VPQLVQDVFG 841
>sp|O95486|SC24A_HUMAN Protein transport protein Sec24A OS=Homo sapiens GN=SEC24A PE=1 SV=2
Length = 1093
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 25 PIIPLTSEHITEDGIFLLENGEDALIYIGDRVNSYILDQLFGI 67
PI+ L+ E ++ DG FL++ G ++++G L Q+ G+
Sbjct: 969 PILQLSVEKLSRDGAFLMDAGSVLMLWVGKNCTQNFLSQVLGV 1011
>sp|Q6C2T4|SEC24_YARLI Protein transport protein SEC24 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=SEC24 PE=3 SV=1
Length = 934
Score = 35.0 bits (79), Expect = 0.12, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 26/44 (59%)
Query: 25 PIIPLTSEHITEDGIFLLENGEDALIYIGDRVNSYILDQLFGIS 68
P L+ EH+ G+FL+++G+ +++G +L +FG+S
Sbjct: 805 PCTNLSGEHLISHGLFLIDDGQVMFLWVGRDAQPALLQDVFGVS 848
>sp|Q7S4P3|SEC24_NEUCR Protein transport protein sec-24 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=sec-24 PE=3 SV=1
Length = 950
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 3 IYPRMMAVHTLFSE------EADGSLTTPIIPLTSEHITEDGIFLLENGEDALIYIG-DR 55
IYPR+ ++H + E + P + L+SE G++L+++G+ +++G D
Sbjct: 790 IYPRLYSLHDMPDNAGIPDPETSQIVLPPPMNLSSERFVPFGLYLIDDGQTQFLWVGRDA 849
Query: 56 VNSYILDQLFGI 67
V ILD +FG+
Sbjct: 850 VPQLILD-VFGV 860
>sp|O94855|SC24D_HUMAN Protein transport protein Sec24D OS=Homo sapiens GN=SEC24D PE=1
SV=2
Length = 1032
Score = 35.0 bits (79), Expect = 0.15, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 1 MLIYPRMMAVHTLFSEEADGSLTTPIIPLTSEHITEDGIFLLENGEDALIYIGDRVNSYI 60
+ YP+++ +HTL + ++ + + ++E+GIFLL NG +++G +
Sbjct: 883 LFFYPQLLPIHTL---DVKSTMLPAAVRCSESRLSEEGIFLLANGLHMFLWLGVSSPPEL 939
Query: 61 LDQLFGI 67
+ +F +
Sbjct: 940 IQGIFNV 946
>sp|Q2HH63|SEC24_CHAGB Protein transport protein SEC24 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=SEC24 PE=3 SV=1
Length = 947
Score = 34.3 bits (77), Expect = 0.20, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 3 IYPRMMAVHTLFSE------EADGSLTTPIIPLTSEHITEDGIFLLENGEDALIYIGDRV 56
IYPR+ ++H + E + P + L+SE G++L+++G+ +++G
Sbjct: 787 IYPRLYSLHDMPDNAGYPDPETSQIVLPPPLNLSSERFVPFGLYLIDDGQTQFLWVGRDA 846
Query: 57 NSYILDQLFGIS 68
+L +FG++
Sbjct: 847 VPQLLVDVFGVT 858
>sp|Q3U2P1|SC24A_MOUSE Protein transport protein Sec24A OS=Mus musculus GN=Sec24a PE=1 SV=1
Length = 1090
Score = 34.3 bits (77), Expect = 0.24, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 25 PIIPLTSEHITEDGIFLLENGEDALIYIGDRVNSYILDQLFGISLTRFSPQVV 77
PI+ L+ E ++ DG FL++ G ++++G + L Q+ G+ PQ +
Sbjct: 966 PILQLSVEKLSRDGAFLMDAGSLLMLWVGRNCSQNFLSQVLGVQNYASIPQTM 1018
>sp|A4QUL1|SEC24_MAGO7 Protein transport protein SEC24 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=SEC24 PE=3 SV=1
Length = 959
Score = 33.5 bits (75), Expect = 0.35, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 3 IYPRMMAVHTLFSE------EADGSLTTPIIPLTSEHITEDGIFLLENGEDALIYIGDRV 56
IYPR+ ++H + E + P + L+SE G++L+++G+ +++G
Sbjct: 799 IYPRLYSLHDMPDNAGIPDPETSQIVLPPPLNLSSERFQPFGLYLIDDGQTQFLWVGRDA 858
Query: 57 NSYILDQLFGI 67
+L +FG+
Sbjct: 859 VPQLLIDVFGV 869
>sp|Q86ZK8|SEC24_PODAS Protein transport protein SEC24 OS=Podospora anserina GN=SEC24 PE=3
SV=1
Length = 946
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 3 IYPRMMAVHTLFSE------EADGSLTTPIIPLTSEHITEDGIFLLENGEDALIYIGDRV 56
IYPR+ ++H + E + P + L+SE G++L+++G+ +++G
Sbjct: 786 IYPRLYSLHDMPDNAGIPDPETSQIVLPPPLNLSSEKFVPYGLYLIDDGQTQFLWVGREA 845
Query: 57 NSYILDQLFGIS 68
+L +F ++
Sbjct: 846 VPQLLVDVFDVA 857
>sp|Q54U61|SEC24_DICDI Protein transport protein SEC24 OS=Dictyostelium discoideum
GN=sec24 PE=3 SV=1
Length = 1013
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 23 TTPIIP----LTSEHITEDGIFLLENGEDALIYIGDRVNSYILDQLFGI 67
TP +P L+S+ + +G+F + NG ++IG+++ + +FG+
Sbjct: 880 NTPFVPHSFKLSSDELQRNGLFAIVNGYTLYLFIGEQLPQPVFTDIFGV 928
>sp|Q6MKS2|UVRC_BDEBA UvrABC system protein C OS=Bdellovibrio bacteriovorus (strain
ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) GN=uvrC
PE=3 SV=1
Length = 630
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 6/37 (16%)
Query: 32 EHITEDGIFLLENGEDALIYIG------DRVNSYILD 62
E T+ G++L++N D +IYIG +RV SY D
Sbjct: 15 EFPTQSGVYLMKNTADKIIYIGKAKNLRNRVRSYFND 51
>sp|Q8TCJ2|STT3B_HUMAN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit STT3B OS=Homo sapiens GN=STT3B PE=1 SV=1
Length = 826
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 30 TSEHITEDGIFLLENGEDALIYIGDRVNSYILDQLF--GISLTRFSP--QVVFVHGSGPI 85
TSEH+ G+F L L Y+ DR+ LF G+SL + V+++ +G I
Sbjct: 318 TSEHMAAAGVFALLQAYAFLQYLRDRLTKQEFQTLFFLGVSLAAGAVFLSVIYLTYTGYI 377
Query: 86 TPMSVSYSS 94
P S + S
Sbjct: 378 APWSGRFYS 386
>sp|O95487|SC24B_HUMAN Protein transport protein Sec24B OS=Homo sapiens GN=SEC24B PE=1 SV=2
Length = 1268
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 11/42 (26%), Positives = 25/42 (59%)
Query: 25 PIIPLTSEHITEDGIFLLENGEDALIYIGDRVNSYILDQLFG 66
P+ L++E +T +G FL++ G I++G ++ ++ + G
Sbjct: 1144 PLQKLSAEKLTREGAFLMDCGSVFYIWVGKGCDNNFIEDVLG 1185
>sp|Q3TDQ1|STT3B_MOUSE Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit STT3B OS=Mus musculus GN=Stt3b PE=1 SV=2
Length = 823
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 30 TSEHITEDGIFLLENGEDALIYIGDRVNSYILDQLF--GISLTRFSP--QVVFVHGSGPI 85
TSEH+ G+F L L Y+ DR+ LF G+SL + V+++ +G I
Sbjct: 315 TSEHMAAAGVFALLQAYAFLQYLRDRLTKQEFQTLFFLGVSLAAGAVFLSVIYLTYTGYI 374
Query: 86 TPMSVSYSS 94
P S + S
Sbjct: 375 APWSGRFYS 383
>sp|Q0PVD8|SEC24_PICPA Protein transport protein SEC24 OS=Komagataella pastoris GN=SEC24
PE=3 SV=1
Length = 960
Score = 29.6 bits (65), Expect = 5.7, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 22/88 (25%)
Query: 2 LIYPRMMAVHTLFSE-------------EADGSLTTPI---------IPLTSEHITEDGI 39
IYP + ++H + E EA +T PI I TS + G+
Sbjct: 774 FIYPTIYSLHDMADECGLPEELEETYVNEAGEEVTEPIDGDIVLPEPINDTSTLLAPYGL 833
Query: 40 FLLENGEDALIYIGDRVNSYILDQLFGI 67
+L+++G D +Y+G +L +FG+
Sbjct: 834 YLIDSGTDLFLYVGGESVPQLLLDVFGV 861
>sp|Q876F5|SC242_SACBA Protein transport protein SEC24-2 OS=Saccharomyces bayanus
GN=SEC242 PE=3 SV=1
Length = 926
Score = 29.3 bits (64), Expect = 7.4, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 13/76 (17%)
Query: 3 IYPRMMAVHTLFSEEA------DGSLTTPII---PL--TSEHITEDGIFLLENGEDALIY 51
IYP + ++H + E DG T ++ PL TS G++L++NG + ++
Sbjct: 752 IYPDVYSLHDMADEAGLPLQTEDGETTATVVLPQPLNATSSLFERYGLYLIDNGNELFLW 811
Query: 52 I-GDRVNSYILDQLFG 66
+ GD V + + D +FG
Sbjct: 812 MGGDAVPALVFD-VFG 826
>sp|Q6CLE0|SEC24_KLULA Protein transport protein SEC24 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=SEC24 PE=3 SV=1
Length = 924
Score = 29.3 bits (64), Expect = 8.0, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 3 IYPRMMAVHTL-----FSEEADGSLTTPI-IPLTSEHITEDGIFLLENGEDALIYIGDRV 56
IYP + ++H + +E G + P I TS + G++L++ G D ++IG
Sbjct: 755 IYPTVYSLHDMPDEAGLPDEETGEIVLPQPINSTSSLLERYGLYLIDTGLDMFLWIGGDA 814
Query: 57 NSYILDQLFG 66
++ +FG
Sbjct: 815 VPELVTDVFG 824
>sp|Q6FX11|SC241_CANGA Protein transport protein SEC24-1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=SEC241 PE=3 SV=1
Length = 897
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 15/70 (21%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 3 IYPRMMAVHTL-----FSEEADGSLTTPIIPLTSEHITEDGIFLLENGEDALIYIGDRVN 57
IYP + ++H + +++E + I T+ + + G++L++NG + +++G
Sbjct: 730 IYPSIYSMHDMGDDCGYTDETGNVILPECINDTAILMEKYGLYLIDNGSELFLWVGGEAV 789
Query: 58 SYILDQLFGI 67
+L +FG+
Sbjct: 790 PELLSDVFGV 799
>sp|P45494|PEPV_LACDL Beta-Ala-Xaa dipeptidase OS=Lactobacillus delbrueckii subsp. lactis
GN=pepV PE=1 SV=1
Length = 470
Score = 28.9 bits (63), Expect = 9.5, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 36 EDGIFLLENGEDALIYIGDRVNSYILDQLFGISLTRFSPQVVFVHGSGP-ITPMSVSYSS 94
E GIF LE D Y+LD+ T +PQV SGP + + ++Y S
Sbjct: 186 EQGIFTLEFS----FKNDDTKGDYVLDKFKAGIATNVTPQVTRATISGPDLEAVKLAYES 241
Query: 95 F----DLDGSCLVLTES 107
F +LDGS + ES
Sbjct: 242 FLADKELDGSFEINDES 258
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,801,226
Number of Sequences: 539616
Number of extensions: 1754290
Number of successful extensions: 3942
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 3919
Number of HSP's gapped (non-prelim): 39
length of query: 121
length of database: 191,569,459
effective HSP length: 88
effective length of query: 33
effective length of database: 144,083,251
effective search space: 4754747283
effective search space used: 4754747283
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)