BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033371
(120 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZS51|PMP22_ARATH Peroxisomal membrane protein PMP22 OS=Arabidopsis thaliana GN=PMP22
PE=1 SV=1
Length = 190
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 84/109 (77%), Gaps = 1/109 (0%)
Query: 6 KEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFDFGYGV 65
K ++YL QLQ HPLRTKAITAGVL+G SD ++QK+SG++K+QL+R+LL ++F G+
Sbjct: 8 KTTLQRYLSQLQQHPLRTKAITAGVLSGVSDVVSQKLSGIQKIQLRRVLLKVIFAGGFLG 67
Query: 66 PFGHFLNKFLDAIFKG-RDNKSVAKKVLLEQLIFSPWINFLFMTYFGLV 113
P GHF + +LD FKG +D ++VAKKV+LEQL SP + LFM Y+G+V
Sbjct: 68 PAGHFFHTYLDKFFKGKKDTQTVAKKVILEQLTLSPLNHLLFMIYYGVV 116
>sp|Q54FR4|PX24D_DICDI PXMP2/4 family protein 4 OS=Dictyostelium discoideum
GN=DDB_G0290631 PE=3 SV=1
Length = 185
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Query: 5 VKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKI----SGVKKLQLKRLLLLMLFD 60
+K A YL QL +P+ TKA+T+G L SD++ Q I KK KR + + +F
Sbjct: 8 LKLAQSHYLSQLHKYPVATKAVTSGFLYLISDSLVQGIELSRDKDKKYDFKRSMRMAVFG 67
Query: 61 FGYGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVE 114
F P H+ K+LD F + + K+ ++Q++ SP NFLF + G++E
Sbjct: 68 FAVTGPLFHYWFKYLDKHFPKKSYRHAFIKLTIDQVVCSPVFNFLFFSGMGILE 121
>sp|Q54XX9|PX24B_DICDI PXMP2/4 family protein 2 OS=Dictyostelium discoideum
GN=DDB_G0278529 PE=3 SV=1
Length = 193
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
Query: 5 VKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKIS-------GVKKLQLKRLLLLM 57
+++ W YL L HPL TK+++ G L G D +AQ++ KL KR+ +
Sbjct: 1 MRKLWGLYLGLLDNHPLVTKSLSTGFLMGTGDILAQRLEHKFKDEKSQFKLDYKRVATMS 60
Query: 58 LFDFGYGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVENHG 117
Y P H+ + LD + KG + KK+L++QL+F+P FMT + N G
Sbjct: 61 TVGIFYSGPMLHYWYRSLDIMVKGEGRSVIIKKMLIDQLLFAPVAIGGFMTVTNFINNKG 120
>sp|Q66GV0|MPV17_XENLA Protein Mpv17 OS=Xenopus laevis GN=mpv17 PE=2 SV=2
Length = 177
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 9 WRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKI---SGVKKLQLKRLLLLMLFDFGYGV 65
WR Y L HP + + +TAG L G D I+Q++ G+K ++R + +M F +
Sbjct: 5 WRAYQRLLGAHPWKVQIVTAGSLVGVGDVISQQLLERKGLKGHSIERTVKMMGIGFCFVG 64
Query: 66 PFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSP 100
P K LD I G KK+LL+Q+ F+P
Sbjct: 65 PVVGGWYKILDRIIPGSGKPVALKKMLLDQVAFAP 99
>sp|P19258|MPV17_MOUSE Protein Mpv17 OS=Mus musculus GN=Mpv17 PE=2 SV=1
Length = 176
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Query: 9 WRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKI---SGVKKLQLKRLLLLMLFDFGYGV 65
WR Y L HP + + +TAG L G D I+Q++ G+++ Q R L ++ G+
Sbjct: 4 WRAYQRALAAHPWKVQVLTAGSLMGVGDMISQQLVERRGLQQHQAGRTLTMVSLGCGFVG 63
Query: 66 PFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVENHGVQS 120
P K LD + G KK+LL+Q F+P F+ G++ Q
Sbjct: 64 PVVGGWYKVLDHLIPGTTKVHALKKMLLDQGGFAPCFLGCFLPLVGILNGMSAQD 118
>sp|Q54GD8|PX24C_DICDI PXMP2/4 family protein 3 OS=Dictyostelium discoideum
GN=DDB_G0290223 PE=3 SV=1
Length = 184
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Query: 12 YLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFDFGYGVPFGHFL 71
Y+ +L+ P++TKA+T+ L+ S +AQK KK+ ++ ++ P H+
Sbjct: 17 YMKKLKSKPIQTKALTSATLSFISSVVAQKFIEKKKINWNAVVKFTVWGL-ISSPLVHYW 75
Query: 72 NKFLDAIFKG-RDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVE 114
+ LD +FK +D K++++QL+F+P+IN F + +++
Sbjct: 76 HIILDRLFKNIKDKYQSWGKLIVDQLVFAPFINIAFYSVLAILD 119
>sp|Q5BK62|MPV17_RAT Protein Mpv17 OS=Rattus norvegicus GN=Mpv17 PE=2 SV=1
Length = 176
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Query: 9 WRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKI---SGVKKLQLKRLLLLMLFDFGYGV 65
WR Y L HP + + +TAG L G D I+Q++ G+++ Q R L + G+
Sbjct: 4 WRAYQRALAAHPWKVQVLTAGSLMGLGDIISQQLVERRGLQQHQTGRTLTMASLGCGFVG 63
Query: 66 PFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVENHGVQS 120
P + LD + G + KK+LL+Q F+P F+ G++ Q
Sbjct: 64 PVVGGWYRVLDHLIPGTTKVNALKKMLLDQGGFAPCFLGCFLPLVGVLNGMSAQD 118
>sp|Q07066|PXMP2_RAT Peroxisomal membrane protein 2 OS=Rattus norvegicus GN=Pxmp2 PE=1
SV=2
Length = 194
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Query: 1 MSNIVKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKK-----LQLKRLLL 55
+ ++ K A +YL+ L+ +P+ TKA+++G+L+ + +AQ I +K L++ LL
Sbjct: 14 LRSLPKRALAQYLLFLKFYPVVTKAVSSGILSALGNLLAQMIEKKQKKDSRSLEVSGLLR 73
Query: 56 LMLFDFGYGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVEN 115
+++ P H+L F++ + K++LL++L F+P LF L+E
Sbjct: 74 YLVYGLFVTGPLSHYLYLFMEYWVPPEVPWARVKRLLLDRLFFAPTFLLLFFFVMNLLEG 133
Query: 116 HGVQ 119
+
Sbjct: 134 KNIS 137
>sp|P39210|MPV17_HUMAN Protein Mpv17 OS=Homo sapiens GN=MPV17 PE=1 SV=1
Length = 176
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Query: 9 WRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKI---SGVKKLQLKRLLLLMLFDFGYGV 65
WR Y L HP + + +TAG L G D I+Q++ G+++ Q R L ++ G+
Sbjct: 4 WRAYQRALAAHPWKVQVLTAGSLMGLGDIISQQLVERRGLQEHQRGRTLTMVSLGCGFVG 63
Query: 66 PFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVENHGVQS 120
P K LD G KK+LL+Q F+P F+ G + Q
Sbjct: 64 PVVGGWYKVLDRFIPGTTKVDALKKMLLDQGGFAPCFLGCFLPLVGALNGLSAQD 118
>sp|Q2KIN6|MPV17_BOVIN Protein Mpv17 OS=Bos taurus GN=MPV17 PE=2 SV=1
Length = 176
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 3/115 (2%)
Query: 9 WRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKI---SGVKKLQLKRLLLLMLFDFGYGV 65
WR Y L HP + + +TAG L G D I+Q++ G++ Q R L + G+
Sbjct: 4 WRAYQRALTAHPWKVQVLTAGSLMGLGDVISQQLVERRGLQAHQAGRTLTMASLGCGFVG 63
Query: 66 PFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVENHGVQS 120
P + LD + G KK+LL+Q F+P F+ G + Q
Sbjct: 64 PVVGGWYRVLDRLIPGTTKVDALKKMLLDQGGFAPCFLGCFLPLVGTLNGLSAQD 118
>sp|Q5TZ51|MPV17_DANRE Protein Mpv17 OS=Danio rerio GN=mpv17 PE=2 SV=1
Length = 177
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 9 WRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKI---SGVKKLQLKRLLLLMLFDFGYGV 65
WR Y + HP + + ITAG L G D I+Q++ G+ +R +M F +
Sbjct: 5 WRSYQALMAKHPWKVQIITAGSLVGVGDVISQQLIERRGLANHNARRTAKMMSIGFFFVG 64
Query: 66 PFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSP 100
P K LD + G + KK+L++Q+ F+P
Sbjct: 65 PVVGGWYKVLDKLVTGGTKSAALKKMLVDQVGFAP 99
>sp|Q2KIY1|PXMP2_BOVIN Peroxisomal membrane protein 2 OS=Bos taurus GN=PXMP2 PE=2 SV=3
Length = 196
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 11/122 (9%)
Query: 1 MSNIVKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQ-------KISGVKKLQLKRL 53
+ + + A +YL L+++P+ TKA T+G+L+ + +AQ K + +KL +
Sbjct: 14 LGPLPRRALSQYLRLLRLYPVLTKAATSGILSALGNFLAQLIEKKQKKENCSQKLDVSGP 73
Query: 54 LLLMLFDFGYGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLV 113
L ++ F + P GHF ++ + K++LL++L+F+P F++ F LV
Sbjct: 74 LRYAIYGFFFTGPLGHFFYLLMERWIPSEVPLAGIKRLLLDRLLFAP----AFLSLFFLV 129
Query: 114 EN 115
N
Sbjct: 130 MN 131
>sp|Q6DIY8|M17L2_XENTR Mpv17-like protein 2 OS=Xenopus tropicalis GN=mpv17l2 PE=2 SV=1
Length = 222
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 23 TKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFDFGYGV---PFGHFLNKFLDAIF 79
T ++ G+L G D+I Q + + KR L F G P HF +LD F
Sbjct: 28 TNTVSCGLLLGIGDSIQQSREVRRDPERKRDWLRTGRMFAIGCSMGPLMHFWYSWLDRSF 87
Query: 80 KGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVENHGVQ 119
GR V +KVL++QL+ SP + + G +E ++
Sbjct: 88 PGRGITVVMRKVLIDQLVASPVLGLWYFLGMGSMEGQKLE 127
>sp|O14142|SYM1_SCHPO Protein sym1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=sym1 PE=3 SV=1
Length = 206
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 25/129 (19%)
Query: 11 KYLIQLQVHPLRTKAITAGVLAGCSDAIAQKIS----------GVKKLQL---------K 51
+Y + P+ T +TAG L G SDA+AQ ++ G+ ++L K
Sbjct: 8 RYNALFEKAPIMTMCLTAGTLGGISDAVAQGLTIYQTNKNAMIGLDGVRLNTHPEIPSIK 67
Query: 52 RLLLLMLFDFGYGVPFGHFLNKFLDAIF---KGRDNKSVAKKVLLEQLIFSPWINFLFMT 108
R+L + F F PF + L A F KG N V K+VLL+Q +F+P+ F +
Sbjct: 68 RVLQFVTFGFAIS-PFQFRWLRLLSAKFPIEKGAIN--VVKRVLLDQAVFAPFGTAFFFS 124
Query: 109 YFGLVENHG 117
+ L E G
Sbjct: 125 WMTLAEGKG 133
>sp|Q54ZX5|PX24A_DICDI PXMP2/4 family protein 1 OS=Dictyostelium discoideum
GN=DDB_G0277335 PE=3 SV=1
Length = 202
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 12 YLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFDFGYGVPFGHFL 71
Y LQ P+ TK++T V+ D +AQKI + KR L++ VP HF
Sbjct: 13 YKKSLQNRPVITKSLTGTVVFFLGDTLAQKIEN-RGYDPKRTLMMCTVGTFIVVPQIHFW 71
Query: 72 NKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMT 108
KFLD F KV+++QL F P++ MT
Sbjct: 72 FKFLDKTFTKPGWAGAIPKVVVDQLTFGPYLFVCNMT 108
>sp|Q7SCY7|SYM1_NEUCR Protein sym-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A
/ CBS 708.71 / DSM 1257 / FGSC 987) GN=sym-1 PE=3 SV=2
Length = 172
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 5/114 (4%)
Query: 12 YLIQLQVHPLRTKAITAGVLAGCSDAIAQKI---SGVKKLQLKRLLLLMLFDFGYGVPFG 68
Y QL PL T+A+T +L G D AQ++ G+ L R ++L+ P
Sbjct: 5 YKAQLAARPLLTQAVTTSILFGVGDVAAQQLVDRRGLSNHDLTRTGRMVLYGGAVFGPAA 64
Query: 69 HFLNKFLD--AIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVENHGVQS 120
+FL + G NK++ +V +Q +F+P +F+ ++E V+
Sbjct: 65 TTWFRFLQKRVVVPGSTNKTILARVAADQGLFAPTFIGIFLGSMAVLEGTDVKE 118
>sp|Q6DGV7|M17L2_DANRE Mpv17-like protein 2 OS=Danio rerio GN=mpv17l2 PE=2 SV=1
Length = 199
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 66 PFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVENH 116
PF H+ ++LD F G +V KKVL++QL+ SP + + G++E H
Sbjct: 75 PFMHYWYQWLDKYFIGNGINNVCKKVLVDQLVASPTLGAWYFLGMGMMEGH 125
>sp|P42925|PXMP2_MOUSE Peroxisomal membrane protein 2 OS=Mus musculus GN=Pxmp2 PE=2 SV=2
Length = 194
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Query: 23 TKAITAGVLAGCSDAIAQKISGVKK-----LQLKRLLLLMLFDFGYGVPFGHFLNKFLDA 77
TKA+++G+L+ + +AQ I ++ L++ LL +++ P H+L F++
Sbjct: 36 TKAVSSGILSALGNLLAQTIEKKQRKDSRLLEVSGLLRYLVYGLFVTGPLSHYLYLFMEY 95
Query: 78 IFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVENHGVQ 119
+ K++LL++L F+P LF L+E V
Sbjct: 96 SVPPEVPWASVKRLLLDRLFFAPTFLLLFFFVMNLLEGKNVS 137
>sp|Q754F0|SYM1_ASHGO Protein SYM1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=SYM1 PE=3 SV=1
Length = 182
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 8/115 (6%)
Query: 12 YLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFDFGYGVPF---G 68
Y LQ HP RT A+T G L G D +AQ + L F +G V F G
Sbjct: 8 YKASLQSHPKRTNALTTGFLFGLGDIVAQTQFPEPGASYDPMRTLRPFLYG-AVLFSLVG 66
Query: 69 HFLNKFLDAIFKGRDNKS----VAKKVLLEQLIFSPWINFLFMTYFGLVENHGVQ 119
+FL + GR ++ V +V +QLIF+P L+ T L+E ++
Sbjct: 67 DKWYRFLSTVRLGRLPQAHWANVLARVACDQLIFAPIGVPLYYTAMALMEGGSLE 121
>sp|Q7YWV6|MPV17_CAEEL Mpv17-like protein OS=Caenorhabditis elegans GN=T18D3.9 PE=3 SV=1
Length = 181
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 15 QLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFDFGYGVPFGHFLNKF 74
+L +PL T+ AG ++G D +AQ +S ++ R + P +
Sbjct: 10 RLATNPLSTQMCIAGTISGSGDCLAQYLSHNQEWDRWRTARFSFLSSCFMAPSLFIWFRL 69
Query: 75 LDAIFKGRDNKS--VAKKVLLEQLIFSPWIN 103
L+ + KG +NKS + KK+ ++QL FSP N
Sbjct: 70 LEKV-KG-NNKSLLLVKKLCIDQLCFSPCFN 98
>sp|Q68F62|MP17L_XENLA Mpv17-like protein OS=Xenopus laevis GN=mpv17l PE=2 SV=1
Length = 203
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 11 KYLIQL-QVHPLRTKAITAGVLAGCSDAIAQKIS--GVKKLQLKRLLLLMLFDFGYGVPF 67
+ LIQ + HP T G L +D + QK+S + + K+ + L F + F
Sbjct: 2 RILIQFTKRHPWLTNVTIYGSLFASADIVQQKLSKSPTEPIDFKQTAKVGLVGFCFHANF 61
Query: 68 GHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVE 114
F +F++ F G +V +KV +QL+ +P F T L++
Sbjct: 62 NFFWLRFIERTFPGSAPLNVIRKVACDQLMAAPITISAFYTGLSLLD 108
>sp|Q9NR77|PXMP2_HUMAN Peroxisomal membrane protein 2 OS=Homo sapiens GN=PXMP2 PE=1 SV=3
Length = 195
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 1 MSNIVKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKR------LL 54
+ + + A +YL+ L+++P+ TKA T+G+L+ + +AQ I +K + R L
Sbjct: 14 LGALPRRALAQYLLFLRLYPVLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVGGPL 73
Query: 55 LLMLFDFGYGVPFGHFLNKFLD 76
++ F + P HF F++
Sbjct: 74 RYAVYGFFFTGPLSHFFYFFME 95
>sp|Q6BMY0|SYM1_DEBHA Protein SYM1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767
/ JCM 1990 / NBRC 0083 / IGC 2968) GN=SYM1 PE=3 SV=1
Length = 206
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 12/120 (10%)
Query: 9 WRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKI-SGVKKLQLKRLLLLMLFDFGYGVPF 67
++KY + PL T IT G L G D +AQ + K KR L + P
Sbjct: 5 YQKYSQLIAKRPLITNIITTGFLFGSGDYLAQTLYPSSSKYDYKRTLRATFYGSIIFAPI 64
Query: 68 G----HFLNKFLDAIFKGRDNKSVAK------KVLLEQLIFSPWINF-LFMTYFGLVENH 116
G L+K K + + +V+K KV ++QL+F+P+I L+ + ++E H
Sbjct: 65 GDKWYRLLHKINFPFPKTKVSPTVSKVLNTLTKVGVDQLVFAPFIGIPLYYSVMSVLEFH 124
>sp|Q2QL34|MP17L_HUMAN Mpv17-like protein OS=Homo sapiens GN=MPV17L PE=1 SV=1
Length = 196
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 19 HPLRTKAITAGVLAGCSDAIAQKISGVKK--LQLKRLLLLMLFDFGYGVPFGHFLNKFLD 76
HP T + G L DA+ Q++ G + Q +R+ L++ + F + + L+
Sbjct: 15 HPWPTNVLLYGSLVSAGDALQQRLQGREANWRQTRRVATLVV---TFHANFNYVWLRLLE 71
Query: 77 AIFKGRDNKSVAKKVLLEQLIFSP 100
GR ++ K+L +Q++ +P
Sbjct: 72 RALPGRAPHALLAKLLCDQVVGAP 95
>sp|Q833Z1|PUR5_ENTFA Phosphoribosylformylglycinamidine cyclo-ligase OS=Enterococcus
faecalis (strain ATCC 700802 / V583) GN=purM PE=3 SV=1
Length = 343
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 12 YLIQLQVHPLRTKAITAGVLAGCSDAIAQKISG 44
YL V+P + +AI AGV AGC +A A I G
Sbjct: 105 YLALGTVNPAKVEAIVAGVAAGCCEANAALIGG 137
>sp|A5D787|M17L2_BOVIN Mpv17-like protein 2 OS=Bos taurus GN=MPV17L2 PE=2 SV=1
Length = 218
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 8/103 (7%)
Query: 21 LRTKAITAGVLAGCSDAIAQ----KISGVKKLQLKRLLLLMLFDFGYGVPFGHFLNKFLD 76
L T + GVL D Q + +K +R + + G PF H+ +LD
Sbjct: 26 LVTNTLGCGVLMAAGDGARQTWEIRARPGQKFDPRRSVSMFAVGCSMG-PFLHYWYLWLD 84
Query: 77 AIFKGRDNK---SVAKKVLLEQLIFSPWINFLFMTYFGLVENH 116
+F +V KKVL++QL+ SP + + G +E
Sbjct: 85 RLFPASGFPGLPNVLKKVLIDQLVASPMLGVWYFLGLGCLEGQ 127
>sp|Q99MS3|MP17L_MOUSE Mpv17-like protein OS=Mus musculus GN=Mpv17l PE=1 SV=2
Length = 194
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 5/94 (5%)
Query: 9 WRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISG--VKKLQLKRLLLLMLFDFGYGVP 66
WR + + +P T + L DA+ Q++ G Q +R+ L + G
Sbjct: 5 WRAFPQAARRYPWPTNVLLYAGLFSAGDALQQRLRGGPADWRQTRRVATLAVTFHGN--- 61
Query: 67 FGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSP 100
F + + L+ GR ++V KVL +Q + P
Sbjct: 62 FNYVWLRLLERALPGRAPRTVLAKVLCDQTVGGP 95
>sp|P87515|POLN_BFV Non-structural polyprotein OS=Barmah forest virus PE=2 SV=2
Length = 2410
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 59 FDFGYGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFL 105
F FG + G FL F++ I N +A +VL +QL SPW F+
Sbjct: 2221 FKFGAMMKSGMFLTLFVNTIL----NVVIACRVLEDQLAQSPWPAFI 2263
>sp|Q59Q43|SYM1_CANAL Protein SYM1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=SYM1 PE=3 SV=1
Length = 195
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 18/116 (15%)
Query: 19 HPLRTKAITAGVLAGCSDAIAQKISGV--------KKLQLKRLLLLMLFDFGYGVPFGHF 70
PL T IT G+L G DA+AQ + R L +++ P G
Sbjct: 15 RPLITNMITTGLLVGGGDALAQFFFPNNDNNNLEQQPFDYLRNLRAIIYGSLIFAPIGDK 74
Query: 71 LNKFLDAIFKGRDNK---------SVAKKVLLEQLIFSPWINF-LFMTYFGLVENH 116
KFL+ N S +V+++QL+F+P+I L+ + ++EN
Sbjct: 75 WYKFLNTKVVWTRNAQKPQYQRSMSTLLRVMVDQLVFAPFIGIPLYYSSMTILENR 130
>sp|Q567V2|M17L2_HUMAN Mpv17-like protein 2 OS=Homo sapiens GN=MPV17L2 PE=1 SV=2
Length = 206
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 66 PFGHFLNKFLDAIFKG---RDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVENHGV 118
PF H+ LD +F R +V KKVL++QL+ SP + + G +E V
Sbjct: 74 PFLHYWYLSLDRLFPASGLRGFPNVLKKVLVDQLVASPLLGVWYFLGLGCLEGQTV 129
>sp|Q73BB8|NORM_BACC1 Probable multidrug resistance protein NorM OS=Bacillus cereus
(strain ATCC 10987) GN=norM PE=3 SV=1
Length = 454
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 12 YLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGV----KKLQLKRLLLLMLFDFGYGVPF 67
Y +QVH L + + +L SDAIA + G K + + ++ L+ + + G+P
Sbjct: 347 YTTDIQVHHLAKEFLIFAILFQISDAIATPVQGALRGYKDVNVSLIMTLIAY-WVIGLPL 405
Query: 68 GHFLNKFLDAIFKG 81
G+ L + D KG
Sbjct: 406 GYILATYTDWAAKG 419
>sp|Q63DZ4|NORM_BACCZ Probable multidrug resistance protein NorM OS=Bacillus cereus
(strain ZK / E33L) GN=norM PE=3 SV=1
Length = 453
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 6 KEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGV----KKLQLKRLLLLMLFDF 61
E Y +QVH L + + +L SDAIA + G K + + ++ L+ + +
Sbjct: 341 NEIASIYTTDIQVHHLAKEFLIFAILFQISDAIATPVQGALRGYKDVNVALIMTLIAY-W 399
Query: 62 GYGVPFGHFLNKFLDAIFKG 81
G+P G+ L + D KG
Sbjct: 400 VIGLPLGYILATYTDWAAKG 419
>sp|Q6HLG9|NORM_BACHK Probable multidrug resistance protein NorM OS=Bacillus
thuringiensis subsp. konkukian (strain 97-27) GN=norM
PE=3 SV=1
Length = 453
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 12 YLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGV----KKLQLKRLLLLMLFDFGYGVPF 67
Y +QVH L + + +L SDAIA + G K + + ++ L+ + + G+P
Sbjct: 347 YTTDIQVHHLAKEFLIFAILFQISDAIATPVQGALRGYKDVNVALIMTLIAY-WVIGLPL 405
Query: 68 GHFLNKFLDAIFKG 81
G+ L + D KG
Sbjct: 406 GYILATYTDWAAKG 419
>sp|Q81T85|NORM_BACAN Probable multidrug resistance protein NorM OS=Bacillus anthracis
GN=norM PE=3 SV=1
Length = 453
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 12 YLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGV----KKLQLKRLLLLMLFDFGYGVPF 67
Y +QVH L + + +L SDAIA + G K + + ++ L+ + + G+P
Sbjct: 347 YTTDIQVHHLAKEFLIFAILFQISDAIATPVQGALRGYKDVNVALIMTLIAY-WVIGLPL 405
Query: 68 GHFLNKFLDAIFKG 81
G+ L + D KG
Sbjct: 406 GYILATYTDWAAKG 419
>sp|E3Q4R4|M28P1_COLGM Probable zinc metalloprotease GLRG_01223 OS=Colletotrichum
graminicola (strain M1.001 / M2 / FGSC 10212)
GN=GLRG_01223 PE=3 SV=1
Length = 1034
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 16 LQVHPLRTKAITAGVLAGCSDAIAQKI 42
+ V P++TKA+ AGVLA SD+ A +
Sbjct: 947 VDVEPIKTKAVPAGVLAKSSDSDAGAV 973
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.143 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,584,564
Number of Sequences: 539616
Number of extensions: 1440108
Number of successful extensions: 3734
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 3693
Number of HSP's gapped (non-prelim): 37
length of query: 120
length of database: 191,569,459
effective HSP length: 87
effective length of query: 33
effective length of database: 144,622,867
effective search space: 4772554611
effective search space used: 4772554611
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)