BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033374
(120 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P42748|UBC4_ARATH Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana GN=UBC4
PE=2 SV=2
Length = 187
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 90/97 (92%), Positives = 94/97 (96%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYP 60
MSSPSKRREMD+MKLMMSDYKVE INDGMQEFYVEFNGPK+S YQGGVWKIRVELPDAYP
Sbjct: 1 MSSPSKRREMDMMKLMMSDYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYP 60
Query: 61 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMF 97
YKSPS+GF+ KIYHPNVDELSGSVCLDVINQTWSPMF
Sbjct: 61 YKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMF 97
>sp|P42749|UBC5_ARATH Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana GN=UBC5
PE=2 SV=2
Length = 185
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 88/97 (90%), Positives = 95/97 (97%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYP 60
MSSPSKRREMDLMKLMMSDYKVEMINDGMQEF+VEF+GPK+S Y+GGVWKIRVELPDAYP
Sbjct: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYP 60
Query: 61 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMF 97
YKSPS+GF+ KIYHPNVDE+SGSVCLDVINQTWSPMF
Sbjct: 61 YKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMF 97
>sp|P16577|UBC4_WHEAT Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum
GN=UBC4 PE=1 SV=1
Length = 184
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 85/97 (87%), Positives = 92/97 (94%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYP 60
MSSPSKRREMDLMKLMMSDYKV+MINDGM EF+V F+GPK+S YQGGVWK+RVEL +AYP
Sbjct: 1 MSSPSKRREMDLMKLMMSDYKVDMINDGMHEFFVHFHGPKDSIYQGGVWKVRVELTEAYP 60
Query: 61 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMF 97
YKSPSIGF NKIYHPNVDE+SGSVCLDVINQTWSPMF
Sbjct: 61 YKSPSIGFTNKIYHPNVDEMSGSVCLDVINQTWSPMF 97
>sp|P42750|UBC6_ARATH Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana GN=UBC6
PE=2 SV=2
Length = 183
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 79/97 (81%), Positives = 90/97 (92%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYP 60
M+SPSKRREMD+MKLMMSDYKV+ +ND +Q FYV F+GP +S YQGGVWKI+VELP+AYP
Sbjct: 1 MASPSKRREMDMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYP 60
Query: 61 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMF 97
YKSPS+GFVNKIYHPNVDE SG+VCLDVINQTWSPMF
Sbjct: 61 YKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMF 97
>sp|Q9P7R4|UBC8_SCHPO Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc8 PE=3 SV=1
Length = 184
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 75/116 (64%), Positives = 93/116 (80%), Gaps = 4/116 (3%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYP 60
MSSP +R E D+MKL+MSDY+V ++ND MQEFYV F+GP E+ Y GG+WK+ VELP YP
Sbjct: 1 MSSPRRRIETDVMKLLMSDYEVTLVNDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYP 60
Query: 61 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFGKPSILFPSTHVTICQMLQ 116
+KSPSIGFVN+I+HPN+DELSGSVCLDVINQTWSPMF +I V + Q+L+
Sbjct: 61 WKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMINIF----EVFLPQLLR 112
>sp|P28263|UBC8_YEAST Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UBC8 PE=1
SV=2
Length = 218
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 65/97 (67%), Positives = 84/97 (86%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYP 60
MSS +R E D+MKL+MSD++V++IND MQEF+V+F GPK++ Y+ GVW++ VELPD YP
Sbjct: 1 MSSSKRRIETDVMKLLMSDHQVDLINDSMQEFHVKFLGPKDTPYENGVWRLHVELPDNYP 60
Query: 61 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMF 97
YKSPSIGFVNKI+HPN+D SGS+CLDVIN TWSP++
Sbjct: 61 YKSPSIGFVNKIFHPNIDIASGSICLDVINSTWSPLY 97
>sp|P62257|UBE2H_MOUSE Ubiquitin-conjugating enzyme E2 H OS=Mus musculus GN=Ube2h PE=2
SV=1
Length = 183
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 84/106 (79%), Gaps = 4/106 (3%)
Query: 1 MSSPS---KRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPD 57
MSSPS +R + D++KL+ S ++V ++ G+ EF V+F GP+ + Y+GGVWK+RV+LPD
Sbjct: 1 MSSPSPGKRRMDTDVVKLIESKHEVTILG-GLNEFVVKFYGPQGTPYEGGVWKVRVDLPD 59
Query: 58 AYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFGKPSIL 103
YP+KSPSIGF+NKI+HPN+DE SG+VCLDVINQTW+ ++ +I
Sbjct: 60 KYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIF 105
>sp|P62256|UBE2H_HUMAN Ubiquitin-conjugating enzyme E2 H OS=Homo sapiens GN=UBE2H PE=1
SV=1
Length = 183
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 84/106 (79%), Gaps = 4/106 (3%)
Query: 1 MSSPS---KRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPD 57
MSSPS +R + D++KL+ S ++V ++ G+ EF V+F GP+ + Y+GGVWK+RV+LPD
Sbjct: 1 MSSPSPGKRRMDTDVVKLIESKHEVTILG-GLNEFVVKFYGPQGTPYEGGVWKVRVDLPD 59
Query: 58 AYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFGKPSIL 103
YP+KSPSIGF+NKI+HPN+DE SG+VCLDVINQTW+ ++ +I
Sbjct: 60 KYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIF 105
>sp|Q32LN1|UBE2H_BOVIN Ubiquitin-conjugating enzyme E2 H OS=Bos taurus GN=UBE2H PE=2 SV=1
Length = 183
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 84/106 (79%), Gaps = 4/106 (3%)
Query: 1 MSSPS---KRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPD 57
MSSPS +R + D++KL+ S ++V ++ G+ EF V+F GP+ + Y+GGVWK+RV+LPD
Sbjct: 1 MSSPSPGKRRMDTDVVKLIESKHEVTILG-GLNEFVVKFYGPQGTPYEGGVWKVRVDLPD 59
Query: 58 AYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFGKPSIL 103
YP+KSPSIGF+NKI+HPN+DE SG+VCLDVINQTW+ ++ +I
Sbjct: 60 KYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIF 105
>sp|Q94A97|UBC35_ARATH Ubiquitin-conjugating enzyme E2 35 OS=Arabidopsis thaliana GN=UBC35
PE=1 SV=1
Length = 153
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 27 DGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVCL 86
D M+ F V GP +S Y+GGV+K+ + LP+ YP +P + F+ KIYHPN+D+L G +CL
Sbjct: 32 DNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL-GRICL 90
Query: 87 DVINQTWSPMFGKPSILF 104
D++ WSP ++L
Sbjct: 91 DILKDKWSPALQIRTVLL 108
>sp|P52490|UBC13_YEAST Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC13 PE=1 SV=1
Length = 153
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 26 NDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVC 85
+D ++ F V GP++S Y+ G++++ + LPD YP ++P + F+ KIYHPN+D L G +C
Sbjct: 29 DDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRL-GRIC 87
Query: 86 LDVINQTWSPMFGKPSILF 104
LDV+ WSP ++L
Sbjct: 88 LDVLKTNWSPALQIRTVLL 106
>sp|Q9FZ48|UBC36_ARATH Ubiquitin-conjugating enzyme E2 36 OS=Arabidopsis thaliana GN=UBC36
PE=1 SV=1
Length = 153
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 27 DGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVCL 86
+ M+ F V GP +S Y+GGV+K+ + LP+ YP +P + F+ KIYHPN+D+L G +CL
Sbjct: 32 ENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL-GRICL 90
Query: 87 DVINQTWSPMFGKPSILF 104
D++ WSP ++L
Sbjct: 91 DILKDKWSPALQIRTVLL 108
>sp|P52486|UBCD4_DROME Ubiquitin-conjugating enzyme E2-22 kDa OS=Drosophila melanogaster
GN=UbcD4 PE=1 SV=2
Length = 199
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 6 KRREMDLMK---LMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYK 62
KR ++M+ ++ K+E++ND E E GP ++ Y+GG + + +++P+ YP+
Sbjct: 10 KREFKEVMRSEEIVQCSIKIELVNDSWTELRGEIAGPPDTPYEGGKFVLEIKVPETYPFN 69
Query: 63 SPSIGFVNKIYHPNVDELSGSVCLDVINQTWS 94
P + F+ +I+HPN+ ++G++CLD++ W+
Sbjct: 70 PPKVRFITRIWHPNISSVTGAICLDILKDNWA 101
>sp|P35128|UBE2N_DROME Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben
PE=2 SV=1
Length = 151
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 32 FYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQ 91
F+V GP +S ++GGV+K+ + LP+ YP +P + F+ KIYHPN+D L G +CLDV+
Sbjct: 35 FHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDRL-GRICLDVLKD 93
Query: 92 TWSPMFGKPSILF 104
WSP +IL
Sbjct: 94 KWSPALQIRTILL 106
>sp|O74810|UBC1_SCHPO Ubiquitin-conjugating enzyme E2 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc1 PE=3 SV=2
Length = 217
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Query: 11 DLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVN 70
D+ + + +V IND + F GP+ + Y+GG + + +E+P YP++ P + F
Sbjct: 15 DVQQDKQAGIQVWTINDDISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFRPPKMNFDT 74
Query: 71 KIYHPNVDELSGSVCLDVINQTWSPMFGKPSILFPSTHVTIC 112
KIYHPNV +G++CLD++ WSP++ S L S +C
Sbjct: 75 KIYHPNVSSQTGAICLDILKDQWSPVYTMKSALI-SLQSLLC 115
>sp|D3ZDK2|UB2D1_RAT Ubiquitin-conjugating enzyme E2 D1 OS=Rattus norvegicus GN=Ube2d1
PE=1 SV=1
Length = 147
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D + + GP +S+YQGGV+ + V P YP+K P I F KIYHPN++ +GS+
Sbjct: 26 VGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFGKPSILFPSTHVTICQML 115
CLD++ WSP +L ++IC +L
Sbjct: 85 CLDILRSQWSPALTVSKVL-----LSICSLL 110
>sp|P61080|UB2D1_MOUSE Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2
SV=1
Length = 147
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D + + GP +S+YQGGV+ + V P YP+K P I F KIYHPN++ +GS+
Sbjct: 26 VGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFGKPSILFPSTHVTICQML 115
CLD++ WSP +L ++IC +L
Sbjct: 85 CLDILRSQWSPALTVSKVL-----LSICSLL 110
>sp|P51668|UB2D1_HUMAN Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1
SV=1
Length = 147
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D + + GP +S+YQGGV+ + V P YP+K P I F KIYHPN++ +GS+
Sbjct: 26 VGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFGKPSILFPSTHVTICQML 115
CLD++ WSP +L ++IC +L
Sbjct: 85 CLDILRSQWSPALTVSKVL-----LSICSLL 110
>sp|Q2TA10|UB2D1_BOVIN Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2
SV=1
Length = 147
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D + + GP +S+YQGGV+ + V P YP+K P I F KIYHPN++ +GS+
Sbjct: 26 VGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFGKPSILFPSTHVTICQML 115
CLD++ WSP +L ++IC +L
Sbjct: 85 CLDILRSQWSPALTVSKVL-----LSICSLL 110
>sp|Q5R7J6|UBE2N_PONAB Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii GN=UBE2N PE=2
SV=1
Length = 152
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 21 KVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEL 80
K E + F+V GP++S ++GG +K+ + LP+ YP +P + F+ KIYHPNVD+L
Sbjct: 24 KAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKL 83
Query: 81 SGSVCLDVINQTWSPMFGKPSILF 104
G +CLD++ WSP ++L
Sbjct: 84 -GRICLDILKDKWSPALQIRTVLL 106
>sp|P61089|UBE2N_MOUSE Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1
SV=1
Length = 152
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 21 KVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEL 80
K E + F+V GP++S ++GG +K+ + LP+ YP +P + F+ KIYHPNVD+L
Sbjct: 24 KAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKL 83
Query: 81 SGSVCLDVINQTWSPMFGKPSILF 104
G +CLD++ WSP ++L
Sbjct: 84 -GRICLDILKDKWSPALQIRTVLL 106
>sp|P61088|UBE2N_HUMAN Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens GN=UBE2N PE=1
SV=1
Length = 152
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 21 KVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEL 80
K E + F+V GP++S ++GG +K+ + LP+ YP +P + F+ KIYHPNVD+L
Sbjct: 24 KAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKL 83
Query: 81 SGSVCLDVINQTWSPMFGKPSILF 104
G +CLD++ WSP ++L
Sbjct: 84 -GRICLDILKDKWSPALQIRTVLL 106
>sp|Q0P5K3|UBE2N_BOVIN Ubiquitin-conjugating enzyme E2 N OS=Bos taurus GN=UBE2N PE=2 SV=1
Length = 152
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 21 KVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEL 80
K E + F+V GP++S ++GG +K+ + LP+ YP +P + F+ KIYHPNVD+L
Sbjct: 24 KAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKL 83
Query: 81 SGSVCLDVINQTWSPMFGKPSILF 104
G +CLD++ WSP ++L
Sbjct: 84 -GRICLDILKDKWSPALQIRTVLL 106
>sp|P61087|UBE2K_MOUSE Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=1
SV=3
Length = 200
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 51/74 (68%)
Query: 21 KVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEL 80
KV+++++ E E GP ++ Y+GG +++ +++P+ YP+ P + F+ KI+HPN+ +
Sbjct: 28 KVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSV 87
Query: 81 SGSVCLDVINQTWS 94
+G++CLD++ W+
Sbjct: 88 TGAICLDILKDQWA 101
>sp|P61086|UBE2K_HUMAN Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1
SV=3
Length = 200
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 51/74 (68%)
Query: 21 KVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEL 80
KV+++++ E E GP ++ Y+GG +++ +++P+ YP+ P + F+ KI+HPN+ +
Sbjct: 28 KVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSV 87
Query: 81 SGSVCLDVINQTWS 94
+G++CLD++ W+
Sbjct: 88 TGAICLDILKDQWA 101
>sp|P61085|UBE2K_BOVIN Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN=UBE2K PE=1 SV=3
Length = 200
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 51/74 (68%)
Query: 21 KVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEL 80
KV+++++ E E GP ++ Y+GG +++ +++P+ YP+ P + F+ KI+HPN+ +
Sbjct: 28 KVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSV 87
Query: 81 SGSVCLDVINQTWS 94
+G++CLD++ W+
Sbjct: 88 TGAICLDILKDQWA 101
>sp|Q9EQX9|UBE2N_RAT Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n
PE=1 SV=1
Length = 152
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 21 KVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEL 80
K E + F+V GP++S ++GG +K+ + LP+ YP +P + F+ KIYHPNVD+L
Sbjct: 24 KAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKL 83
Query: 81 SGSVCLDVINQTWSPMFGKPSILF 104
G +CLD++ WSP ++L
Sbjct: 84 -GRICLDILKDKWSPALQIRTVLL 106
>sp|Q4R4I1|UBE2N_MACFA Ubiquitin-conjugating enzyme E2 N OS=Macaca fascicularis GN=UBE2N
PE=2 SV=1
Length = 152
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 21 KVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEL 80
K E + F+V GP++S ++GG +K+ + LP+ YP +P + F+ KIYHPNVD+
Sbjct: 24 KAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDK- 82
Query: 81 SGSVCLDVINQTWSPMFGKPSILF 104
SG +CLD++ WSP ++L
Sbjct: 83 SGRICLDILKDKWSPALQIRTVLL 106
>sp|P61078|UB2D3_RAT Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus GN=Ube2d3
PE=2 SV=1
Length = 147
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFGKPSILFPSTHVTICQML 115
CLD++ WSP +L ++IC +L
Sbjct: 85 CLDILRSQWSPALTISKVL-----LSICSLL 110
>sp|Q5R4V7|UB2D3_PONAB Ubiquitin-conjugating enzyme E2 D3 OS=Pongo abelii GN=UBE2D3 PE=2
SV=1
Length = 147
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFGKPSILFPSTHVTICQML 115
CLD++ WSP +L ++IC +L
Sbjct: 85 CLDILRSQWSPALTISKVL-----LSICSLL 110
>sp|P61079|UB2D3_MOUSE Ubiquitin-conjugating enzyme E2 D3 OS=Mus musculus GN=Ube2d3 PE=1
SV=1
Length = 147
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFGKPSILFPSTHVTICQML 115
CLD++ WSP +L ++IC +L
Sbjct: 85 CLDILRSQWSPALTISKVL-----LSICSLL 110
>sp|Q4R5N4|UB2D3_MACFA Ubiquitin-conjugating enzyme E2 D3 OS=Macaca fascicularis GN=UBE2D3
PE=2 SV=1
Length = 147
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFGKPSILFPSTHVTICQML 115
CLD++ WSP +L ++IC +L
Sbjct: 85 CLDILRSQWSPALTISKVL-----LSICSLL 110
>sp|P61077|UB2D3_HUMAN Ubiquitin-conjugating enzyme E2 D3 OS=Homo sapiens GN=UBE2D3 PE=1
SV=1
Length = 147
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFGKPSILFPSTHVTICQML 115
CLD++ WSP +L ++IC +L
Sbjct: 85 CLDILRSQWSPALTISKVL-----LSICSLL 110
>sp|P62840|UB2D2_XENLA Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laevis GN=ube2d2 PE=1
SV=1
Length = 147
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFGKPSILFPSTHVTICQML 115
CLD++ WSP +L ++IC +L
Sbjct: 85 CLDILRSQWSPALTISKVL-----LSICSLL 110
>sp|P62839|UB2D2_RAT Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus GN=Ube2d2
PE=1 SV=1
Length = 147
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFGKPSILFPSTHVTICQML 115
CLD++ WSP +L ++IC +L
Sbjct: 85 CLDILRSQWSPALTISKVL-----LSICSLL 110
>sp|Q06AA9|UB2D2_PIG Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa GN=UBE2D2 PE=2
SV=1
Length = 147
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFGKPSILFPSTHVTICQML 115
CLD++ WSP +L ++IC +L
Sbjct: 85 CLDILRSQWSPALTISKVL-----LSICSLL 110
>sp|P62838|UB2D2_MOUSE Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus GN=Ube2d2 PE=1
SV=1
Length = 147
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFGKPSILFPSTHVTICQML 115
CLD++ WSP +L ++IC +L
Sbjct: 85 CLDILRSQWSPALTISKVL-----LSICSLL 110
>sp|P62837|UB2D2_HUMAN Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens GN=UBE2D2 PE=1
SV=1
Length = 147
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFGKPSILFPSTHVTICQML 115
CLD++ WSP +L ++IC +L
Sbjct: 85 CLDILRSQWSPALTISKVL-----LSICSLL 110
>sp|Q1RMX2|UB2D2_BOVIN Ubiquitin-conjugating enzyme E2 D2 OS=Bos taurus GN=UBE2D2 PE=2
SV=1
Length = 147
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFGKPSILFPSTHVTICQML 115
CLD++ WSP +L ++IC +L
Sbjct: 85 CLDILRSQWSPALTISKVL-----LSICSLL 110
>sp|Q9Y2X8|UB2D4_HUMAN Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens GN=UBE2D4 PE=1
SV=1
Length = 147
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D + + GP +S YQGGV+ + + P YP+K P + F KIYHPN++ +GS+
Sbjct: 26 VGDDLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFGKPSILFPSTHVTICQML 115
CLD++ WSP +L ++IC +L
Sbjct: 85 CLDILRSQWSPALTVSKVL-----LSICSLL 110
>sp|P35129|UBC2_CAEEL Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans
GN=let-70 PE=1 SV=1
Length = 147
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D + + GP ES YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFGKPSILFPSTHVTICQML 115
CLD++ WSP +L ++IC +L
Sbjct: 85 CLDILRSQWSPALTISKVL-----LSICSLL 110
>sp|Q9VTY6|UBE2C_DROME Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih
PE=1 SV=1
Length = 178
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 60/103 (58%), Gaps = 4/103 (3%)
Query: 5 SKRREMDLMKLMMSDYK-VEMINDGMQEF--YVEFNGPKESSYQGGVWKIRVELPDAYPY 61
SKR +LM LMM++ + + DG F GP+ + Y G +++ ++ P++YPY
Sbjct: 34 SKRLHKELMNLMMANERGISAFPDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPY 93
Query: 62 KSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFGKPSILF 104
+P + F+ +HPNVD L G++CLD++ WS ++ +IL
Sbjct: 94 AAPVVKFLTSCFHPNVD-LQGAICLDILKDKWSALYDVRTILL 135
>sp|Q86K32|UBE2N_DICDI Probable ubiquitin-conjugating enzyme E2 N OS=Dictyostelium
discoideum GN=ube2n PE=3 SV=2
Length = 154
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 26 NDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVC 85
D + F V +GP +S ++GGV+ + + L D YP +P + F+ KIYHPN+D+L G +C
Sbjct: 29 TDNFRYFKVAISGPLDSPFEGGVFNLELFLTDDYPMSAPKVRFLTKIYHPNIDKL-GRIC 87
Query: 86 LDVINQTWSPMFGKPSILF 104
LD++ WSP ++L
Sbjct: 88 LDILKDKWSPALQIRTVLL 106
>sp|P35134|UBC11_ARATH Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11
PE=2 SV=2
Length = 148
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 11 DLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVN 70
DL K S+ + + M + GP ES Y GGV+ + + P YP+K P + F
Sbjct: 12 DLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKT 71
Query: 71 KIYHPNVDELSGSVCLDVINQTWSPMFGKPSILFPSTHVTICQML 115
K+YHPN++ +GS+CLD++ + WSP +L ++IC +L
Sbjct: 72 KVYHPNINS-NGSICLDILKEQWSPALTISKVL-----LSICSLL 110
>sp|O13685|UBC13_SCHPO Ubiquitin-conjugating enzyme E2 13 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc13 PE=1 SV=1
Length = 148
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 27 DGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVCL 86
D ++ F + GP++S+Y+GG + + + LPD YP P++ F+ KIYHPNVD+L G +CL
Sbjct: 29 DNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKL-GRICL 87
Query: 87 DVINQTWSPMFGKPSILF 104
+ + WSP ++L
Sbjct: 88 STLKKDWSPALQIRTVLL 105
>sp|A5PKP9|UB2D4_XENLA Ubiquitin-conjugating enzyme E2 D4 OS=Xenopus laevis GN=ube2d4 PE=1
SV=1
Length = 147
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Query: 6 KRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPS 65
++ MDL + + + + + + GP +S +QGGV+ + + P YP+K P
Sbjct: 7 QKELMDLQRDPPAQCSAGPVGEDLFHWQATIMGPNDSPFQGGVFFLTIHFPTDYPFKPPK 66
Query: 66 IGFVNKIYHPNVDELSGSVCLDVINQTWSPMFGKPSILFPSTHVTICQML 115
+ F KIYHPN++ +GS+CLD++ WSP +L ++IC +L
Sbjct: 67 VAFTTKIYHPNINS-NGSICLDILRSQWSPALTVSKVL-----LSICSLL 110
>sp|P25867|UBCD1_DROME Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster
GN=eff PE=2 SV=1
Length = 147
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D + + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFGKPSILFPSTHVTICQML 115
CLD++ WSP +L ++IC +L
Sbjct: 85 CLDILRSQWSPALTISKVL-----LSICSLL 110
>sp|P46595|UBC4_SCHPO Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc4 PE=2 SV=1
Length = 147
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Query: 7 RREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSI 66
R DL K S + D + + GP +S Y GGV+ + + P YP+K P +
Sbjct: 8 RELADLGKDPPSSCSAGPVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKV 67
Query: 67 GFVNKIYHPNVDELSGSVCLDVINQTWSPMFGKPSILFPSTHVTICQML 115
F +IYHPN++ +GS+CLD++ WSP +L ++IC +L
Sbjct: 68 NFTTRIYHPNINS-NGSICLDILRDQWSPALTISKVL-----LSICSLL 110
>sp|P15732|UBC5_YEAST Ubiquitin-conjugating enzyme E2-16 kDa OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC5 PE=1 SV=1
Length = 148
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D + + GP +S Y GGV+ + + P YP+K P + F KIYHPN++ SG++
Sbjct: 27 VGDDLYHWQASIMGPSDSPYAGGVFFLSIHFPTDYPFKPPKVNFTTKIYHPNINS-SGNI 85
Query: 85 CLDVINQTWSPMFGKPSILFPSTHVTICQMLQSS 118
CLD++ WSP +L ++IC +L +
Sbjct: 86 CLDILKDQWSPALTLSKVL-----LSICSLLTDA 114
>sp|P15731|UBC4_YEAST Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC4 PE=1 SV=1
Length = 148
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D + + GP +S Y GGV+ + + P YP+K P I F KIYHPN++ +G++
Sbjct: 27 VGDDLYHWQASIMGPADSPYAGGVFFLSIHFPTDYPFKPPKISFTTKIYHPNINA-NGNI 85
Query: 85 CLDVINQTWSPMFGKPSILFPSTHVTICQMLQSS 118
CLD++ WSP +L ++IC +L +
Sbjct: 86 CLDILKDQWSPALTLSKVL-----LSICSLLTDA 114
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,982,843
Number of Sequences: 539616
Number of extensions: 1915203
Number of successful extensions: 3977
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 284
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 3517
Number of HSP's gapped (non-prelim): 336
length of query: 120
length of database: 191,569,459
effective HSP length: 87
effective length of query: 33
effective length of database: 144,622,867
effective search space: 4772554611
effective search space used: 4772554611
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)