Query 033380
Match_columns 120
No_of_seqs 20 out of 22
Neff 2.1
Searched_HMMs 29240
Date Mon Mar 25 22:06:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033380.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033380hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1squ_A CHEX protein; alpha-bet 28.4 60 0.0021 21.5 3.5 29 52-80 45-73 (155)
2 2k75_A Uncharacterized protein 26.2 52 0.0018 21.7 2.8 26 87-114 47-72 (106)
3 1xkr_A Chemotaxis protein CHEC 23.7 78 0.0027 22.1 3.5 27 53-79 66-92 (206)
4 1pcq_O Groes protein; chaperon 23.5 15 0.00051 25.3 -0.3 21 20-42 67-88 (97)
5 2wmf_A Fucolectin-related prot 21.9 38 0.0013 30.3 1.8 16 99-114 30-45 (581)
6 1p3h_A 10 kDa chaperonin; beta 21.7 18 0.00061 25.0 -0.2 21 20-42 70-90 (99)
7 1we3_O CPN10(groes); chaperoni 21.0 15 0.00052 25.4 -0.6 21 20-42 72-92 (100)
8 2wmi_A Fucolectin-related prot 19.7 50 0.0017 29.7 2.2 16 99-114 28-43 (606)
9 1r8o_A STI, kunitz trypsin inh 19.4 1E+02 0.0035 20.7 3.3 8 59-66 26-33 (96)
10 3nx6_A 10KDA chaperonin; bacte 18.2 20 0.00068 24.6 -0.6 21 20-42 67-87 (95)
No 1
>1squ_A CHEX protein; alpha-beta sandwich, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.40A {Thermotoga maritima} SCOP: d.252.1.1 PDB: 1xko_A
Probab=28.36 E-value=60 Score=21.51 Aligned_cols=29 Identities=17% Similarity=0.164 Sum_probs=23.8
Q ss_pred eEEEeeecCCeeEEEEechhhhHhHHHhh
Q 033380 52 SLMLEGDIGGGGCLWISAKVWHLLIDLMS 80 (120)
Q Consensus 52 ~l~lEgDIGGGLvl~I~~~~~~iLvD~lv 80 (120)
.+.+.||+-|-.++.++++....++|.|.
T Consensus 45 ~i~~~G~~~G~~~l~~~~~~a~~i~~~ml 73 (155)
T 1squ_A 45 VIGITGGIEGSLIYSFSSETALKVVSAMM 73 (155)
T ss_dssp EEEEEESCCEEEEEEECHHHHHHHHHHHT
T ss_pred EEEeccCccEEEEEEECHHHHHHHHHHHh
Confidence 46688999999999999888888777753
No 2
>2k75_A Uncharacterized protein TA0387; closed beta barrel, OB fold, structural genomics, PSI-2, protein structure initiative; NMR {Thermoplasma acidophilum}
Probab=26.19 E-value=52 Score=21.72 Aligned_cols=26 Identities=0% Similarity=0.247 Sum_probs=22.1
Q ss_pred cCCeeeeeeccccccCCCCCCeeeeeee
Q 033380 87 SSGTVNLELWSEERPVSKQSPLAVSHEY 114 (120)
Q Consensus 87 g~g~vnleLWSeeRpVSk~tPL~IsH~Y 114 (120)
.||++.+-||.+. +....-++|..-|
T Consensus 47 eTG~I~~tlW~~~--l~~Gdvv~i~ng~ 72 (106)
T 2k75_A 47 DTARIRISSFGKQ--LQDSDVVRIDNAR 72 (106)
T ss_dssp SSCEEEEEEESSC--CCTTEEEEEEEEE
T ss_pred CCCeEEEEEEcCc--cCCCCEEEEEeeE
Confidence 8999999999998 8888888887544
No 3
>1xkr_A Chemotaxis protein CHEC; signal transduction, protein phosphatase, attractant; 1.75A {Thermotoga maritima} SCOP: d.252.1.1 PDB: 2f9z_A
Probab=23.75 E-value=78 Score=22.05 Aligned_cols=27 Identities=22% Similarity=0.468 Sum_probs=22.9
Q ss_pred EEEeeecCCeeEEEEechhhhHhHHHh
Q 033380 53 LMLEGDIGGGGCLWISAKVWHLLIDLM 79 (120)
Q Consensus 53 l~lEgDIGGGLvl~I~~~~~~iLvD~l 79 (120)
+.+.|++-|-.++-++++.+..++|.|
T Consensus 66 i~~~G~l~G~~ll~~~~~~a~~i~~~m 92 (206)
T 1xkr_A 66 MPVTGDIEGSVLLIMGTTVVKKILEIL 92 (206)
T ss_dssp EEEEESSCEEEEEEECHHHHHHHHHHH
T ss_pred EEeecCCCeEEEEEECHHHHHHHHHHH
Confidence 457899999999999999998888864
No 4
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=23.50 E-value=15 Score=25.28 Aligned_cols=21 Identities=14% Similarity=0.305 Sum_probs=16.8
Q ss_pred eee-eccceeecCCccchhhhhhh
Q 033380 20 YEE-YCGTEYRSAGCTEEYSVVER 42 (120)
Q Consensus 20 YEE-ysgtE~rsaGctEEY~Vi~R 42 (120)
|.+ |+|||..-.| |+|-+++.
T Consensus 67 f~k~y~Gtevk~dg--eey~i~re 88 (97)
T 1pcq_O 67 FNDGYGVKSEKIDN--EEVLIMSE 88 (97)
T ss_dssp ECCCSSCEEEEETT--EEEEEEEG
T ss_pred ECCccCCeEEEECC--EEEEEEEh
Confidence 778 9999988766 78877763
No 5
>2wmf_A Fucolectin-related protein; hydrolase, glycoside hydrolase, blood group antigen, fucose utilization; 1.50A {Streptococcus pneumoniae} PDB: 2wmh_A* 2wmg_A*
Probab=21.89 E-value=38 Score=30.34 Aligned_cols=16 Identities=31% Similarity=0.569 Sum_probs=14.7
Q ss_pred cccCCCCCCeeeeeee
Q 033380 99 ERPVSKQSPLAVSHEY 114 (120)
Q Consensus 99 eRpVSk~tPL~IsH~Y 114 (120)
-||+|++.||-|.|=|
T Consensus 30 RR~is~e~Pm~i~~~y 45 (581)
T 2wmf_A 30 RTTINNESPLLLSPLY 45 (581)
T ss_dssp SSCCBTTBCEEEEEEE
T ss_pred cccCCCCCceEEEEEe
Confidence 5899999999999986
No 6
>1p3h_A 10 kDa chaperonin; beta barrel, acidic cluster, flexible loop, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: b.35.1.1 PDB: 1hx5_A 1lep_A 1p82_A 1p83_A
Probab=21.69 E-value=18 Score=24.97 Aligned_cols=21 Identities=43% Similarity=0.817 Sum_probs=16.4
Q ss_pred eeeeccceeecCCccchhhhhhh
Q 033380 20 YEEYCGTEYRSAGCTEEYSVVER 42 (120)
Q Consensus 20 YEEysgtE~rsaGctEEY~Vi~R 42 (120)
|.+|+|||..-.| |+|-+++.
T Consensus 70 f~ky~Gtevk~dg--eey~i~re 90 (99)
T 1p3h_A 70 YSKYGGTEIKYNG--EEYLILSA 90 (99)
T ss_dssp EECTTCEEEEETT--EEEEEEEG
T ss_pred ECCcCCeEEEECC--EEEEEEEh
Confidence 8899999988653 77877763
No 7
>1we3_O CPN10(groes); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: b.35.1.1 PDB: 1wf4_o* 1wnr_A
Probab=21.04 E-value=15 Score=25.42 Aligned_cols=21 Identities=38% Similarity=0.770 Sum_probs=16.3
Q ss_pred eeeeccceeecCCccchhhhhhh
Q 033380 20 YEEYCGTEYRSAGCTEEYSVVER 42 (120)
Q Consensus 20 YEEysgtE~rsaGctEEY~Vi~R 42 (120)
|.+|+|||..-.| |+|-+++.
T Consensus 72 f~ky~Gtevk~dg--eeyli~re 92 (100)
T 1we3_O 72 FAKYGGTEIEIDG--EEYVILSE 92 (100)
T ss_dssp ECTTCSEEEECSS--CEEEEECT
T ss_pred ECCCCCeEEEECC--EEEEEEEh
Confidence 7889999988665 77877753
No 8
>2wmi_A Fucolectin-related protein; glycoside hydrolase, hydrolase, fucose utilization, blood group antigen; HET: A2G GAL FUC; 1.90A {Streptococcus pneumoniae} PDB: 2wmj_A* 2wmk_A* 2wmi_B*
Probab=19.71 E-value=50 Score=29.72 Aligned_cols=16 Identities=25% Similarity=0.530 Sum_probs=15.0
Q ss_pred cccCCCCCCeeeeeee
Q 033380 99 ERPVSKQSPLAVSHEY 114 (120)
Q Consensus 99 eRpVSk~tPL~IsH~Y 114 (120)
-||+|++.||-|.|=|
T Consensus 28 RR~Is~E~Pmlivhid 43 (606)
T 2wmi_A 28 RREINNEHPLLMMPLY 43 (606)
T ss_dssp SSCCSSSSCEEEEEEE
T ss_pred ccccCCCCceEEEEec
Confidence 5999999999999987
No 9
>1r8o_A STI, kunitz trypsin inhibitor; kunitz (STI) trypsin inhibitor, beta-trefoil fold, hydrolase inhibitor; 1.83A {Copaifera langsdorffii} SCOP: b.42.4.1
Probab=19.43 E-value=1e+02 Score=20.66 Aligned_cols=8 Identities=50% Similarity=0.571 Sum_probs=6.8
Q ss_pred cCCeeEEE
Q 033380 59 IGGGGCLW 66 (120)
Q Consensus 59 IGGGLvl~ 66 (120)
-||||.|+
T Consensus 26 ~GGGl~l~ 33 (96)
T 1r8o_A 26 KGGGLVLA 33 (96)
T ss_dssp SCCSEEEE
T ss_pred CCCeEEEe
Confidence 48999998
No 10
>3nx6_A 10KDA chaperonin; bacterial blight, XOO4289, groes, xanthomonas oryzae PV. ORY KACC10331, chaperone; 1.97A {Xanthomonas oryzae PV} SCOP: b.35.1.0
Probab=18.21 E-value=20 Score=24.59 Aligned_cols=21 Identities=43% Similarity=0.955 Sum_probs=16.1
Q ss_pred eeeeccceeecCCccchhhhhhh
Q 033380 20 YEEYCGTEYRSAGCTEEYSVVER 42 (120)
Q Consensus 20 YEEysgtE~rsaGctEEY~Vi~R 42 (120)
|.+|+|||..-.| |+|-+++.
T Consensus 67 ~~ky~Gtevk~dg--~ey~i~re 87 (95)
T 3nx6_A 67 YGQYAGSSYKSEG--VEYKVLRE 87 (95)
T ss_dssp ECTTCSEEEEETT--EEEEEEEG
T ss_pred ECCcCCeEEEECC--EEEEEEEH
Confidence 7889999987654 77877763
Done!