Query 033380
Match_columns 120
No_of_seqs 20 out of 22
Neff 2.1
Searched_HMMs 13730
Date Mon Mar 25 22:06:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033380.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/033380hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2paga1 d.369.1.1 (A:1-135) Hy 27.2 20 0.0014 23.7 2.7 61 2-65 36-99 (135)
2 d1t62a_ b.122.1.4 (A:) Hypothe 19.0 25 0.0018 24.5 1.9 39 80-119 92-151 (166)
3 d1twia2 c.1.6.1 (A:50-313) Dia 17.8 15 0.0011 25.0 0.5 43 57-99 210-256 (264)
4 d1htwa_ c.37.1.18 (A:) Hypothe 17.6 28 0.0021 23.5 1.9 15 48-62 31-45 (158)
5 d1u6za3 c.55.1.8 (A:136-312) E 17.3 22 0.0016 22.5 1.1 9 55-63 5-13 (177)
6 d1knwa2 c.1.6.1 (A:32-278) Dia 15.1 19 0.0014 24.3 0.4 9 57-65 191-199 (247)
7 d1rq0a_ e.38.1.1 (A:) Peptide 14.8 16 0.0012 27.6 0.0 9 1-9 222-230 (333)
8 d1hkva2 c.1.6.1 (A:46-310) Dia 13.7 22 0.0016 24.2 0.5 10 57-66 208-217 (265)
9 d1j7ga_ c.110.1.1 (A:) D-Tyr t 13.6 78 0.0057 21.4 3.4 26 56-81 20-51 (144)
10 d1tiea_ b.42.4.1 (A:) Erythrin 13.4 77 0.0056 21.3 3.3 9 58-66 24-32 (170)
No 1
>d2paga1 d.369.1.1 (A:1-135) Hypothetical protein PSPTO5518 {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=27.20 E-value=20 Score=23.68 Aligned_cols=61 Identities=16% Similarity=0.010 Sum_probs=41.8
Q ss_pred ccCCCCcccee---eeeecCceeeeccceeecCCccchhhhhhhhhhhCCCceeEEEeeecCCeeEE
Q 033380 2 AHFPSGTQWLH---SRVDVNGYEEYCGTEYRSAGCTEEYSVVERSLQHGGEEESLMLEGDIGGGGCL 65 (120)
Q Consensus 2 ~H~PSg~qWl~---sR~e~~GYEEysgtE~rsaGctEEY~Vi~R~l~~~~~ee~l~lEgDIGGGLvl 65 (120)
+.+|..+.++. |-+-+++++.++.++ ..+.+.-+.+.+....+.-..+.+.+. |.||+...
T Consensus 36 ~~~P~~yk~fl~~~g~~~~g~~e~~~~~d--~~s~~~l~e~~~~~~~~glp~~~I~i~-~~~g~~yc 99 (135)
T d2paga1 36 INIPFVFKEFLLTVSDVVYGSLEPVTVTD--PQSHTYLPEVCATAWDLGVPRELIPIC-QDGEDYYC 99 (135)
T ss_dssp CCCCHHHHHHHHHHTTCCBTTBCBCBSSC--TTSTTBHHHHHHHHHHHTCCTTSEEEE-EETTEEEE
T ss_pred CCCCHHHHHHHHHhCCeeeceEEEeecCC--CCccccHHHHHHHHHhhCCCCceEEEE-ECCCceEE
Confidence 35677777765 335678899998886 345677777777777776677777774 55777543
No 2
>d1t62a_ b.122.1.4 (A:) Hypothetical protein EF3133 {Enterococcus faecalis [TaxId: 1351]}
Probab=18.96 E-value=25 Score=24.55 Aligned_cols=39 Identities=21% Similarity=0.431 Sum_probs=25.6
Q ss_pred hhhcccc--------cCCeeeeeeccc-------------cccCCCCCCeeeeeeeeEEec
Q 033380 80 SRKFSSV--------SSGTVNLELWSE-------------ERPVSKQSPLAVSHEYEVIKI 119 (120)
Q Consensus 80 vnrF~eV--------g~g~vnleLWSe-------------eRpVSk~tPL~IsH~Yev~~~ 119 (120)
+-+|++| |.|.-+|+-|-+ .+..+.++| -||..|+|+++
T Consensus 92 ~~pF~~V~~e~A~~EGEGDrsl~~Wr~~H~~ff~~e~~~~g~~f~~dm~-vV~E~F~vV~~ 151 (166)
T d1t62a_ 92 IMPMNKVSESFAQAEGEGDLTLDYWYEEHARFFKEELAPYQLQFYPDML-LVCQSFEVVDL 151 (166)
T ss_dssp EEEGGGCCHHHHHHHC-----CTHHHHHHHHHHHHHHTTTTCCCCTTCE-EEEEEEEEEEC
T ss_pred EEeccccCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCce-EEEEEEEEEeE
Confidence 4478777 999999988854 346888887 58999999864
No 3
>d1twia2 c.1.6.1 (A:50-313) Diaminopimelate decarboxylase LysA {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=17.85 E-value=15 Score=25.00 Aligned_cols=43 Identities=16% Similarity=0.067 Sum_probs=20.2
Q ss_pred eecCCeeEEE-E---echhhhHhHHHhhhhcccccCCeeeeeecccc
Q 033380 57 GDIGGGGCLW-I---SAKVWHLLIDLMSRKFSSVSSGTVNLELWSEE 99 (120)
Q Consensus 57 gDIGGGLvl~-I---~~~~~~iLvD~lvnrF~eVg~g~vnleLWSee 99 (120)
=|||||+=.. - .+-.+.-+.+.+.+.+.+...+.-...||-|.
T Consensus 210 ldiGGGf~v~y~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~l~~EP 256 (264)
T d1twia2 210 VNLGGGLGIPYYKDKQIPTQKDLADAIINTMLKYKDKVEMPNLILEP 256 (264)
T ss_dssp EECCCCBCCCSSSSSCCCCHHHHHHHHHHHHHTTTTTSCCCEEEECC
T ss_pred EeecCCccccCCCCCCCCCHHHHHHHHHHHHHHhcccCCCCeEEEcC
Confidence 5999999554 1 22223334444444443332221224566553
No 4
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=17.60 E-value=28 Score=23.49 Aligned_cols=15 Identities=33% Similarity=0.680 Sum_probs=12.9
Q ss_pred CCceeEEEeeecCCe
Q 033380 48 GEEESLMLEGDIGGG 62 (120)
Q Consensus 48 ~~ee~l~lEgDIGGG 62 (120)
....++.|+||+|-|
T Consensus 31 ~~g~ii~L~G~LGaG 45 (158)
T d1htwa_ 31 EKAIMVYLNGDLGAG 45 (158)
T ss_dssp SSCEEEEEECSTTSS
T ss_pred CCCeEEEEecCCCcc
Confidence 456789999999998
No 5
>d1u6za3 c.55.1.8 (A:136-312) Exopolyphosphatase Ppx {Escherichia coli [TaxId: 562]}
Probab=17.31 E-value=22 Score=22.50 Aligned_cols=9 Identities=67% Similarity=0.981 Sum_probs=6.8
Q ss_pred EeeecCCee
Q 033380 55 LEGDIGGGG 63 (120)
Q Consensus 55 lEgDIGGGL 63 (120)
|=.|||||=
T Consensus 5 Lv~DIGGGS 13 (177)
T d1u6za3 5 LVIDIGGGS 13 (177)
T ss_dssp EEEEECSSC
T ss_pred EEEEeCCCh
Confidence 445999994
No 6
>d1knwa2 c.1.6.1 (A:32-278) Diaminopimelate decarboxylase LysA {Escherichia coli [TaxId: 562]}
Probab=15.07 E-value=19 Score=24.33 Aligned_cols=9 Identities=33% Similarity=0.464 Sum_probs=7.0
Q ss_pred eecCCeeEE
Q 033380 57 GDIGGGGCL 65 (120)
Q Consensus 57 gDIGGGLvl 65 (120)
=|||||+=.
T Consensus 191 ldiGGGf~v 199 (247)
T d1knwa2 191 ISAGGGLSV 199 (247)
T ss_dssp EECCCCCCC
T ss_pred EEecCcccc
Confidence 399999854
No 7
>d1rq0a_ e.38.1.1 (A:) Peptide chain release factor 1, RF1 {Thermotoga maritima [TaxId: 2336]}
Probab=14.82 E-value=16 Score=27.57 Aligned_cols=9 Identities=33% Similarity=0.914 Sum_probs=6.6
Q ss_pred CccCCCCcc
Q 033380 1 MAHFPSGTQ 9 (120)
Q Consensus 1 M~H~PSg~q 9 (120)
++|+|||+.
T Consensus 222 itH~PTGi~ 230 (333)
T d1rq0a_ 222 ITHLPTGIV 230 (333)
T ss_dssp EEETTTCCE
T ss_pred EEEcCCccE
Confidence 478888864
No 8
>d1hkva2 c.1.6.1 (A:46-310) Diaminopimelate decarboxylase LysA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=13.72 E-value=22 Score=24.18 Aligned_cols=10 Identities=40% Similarity=0.571 Sum_probs=7.9
Q ss_pred eecCCeeEEE
Q 033380 57 GDIGGGGCLW 66 (120)
Q Consensus 57 gDIGGGLvl~ 66 (120)
=|||||+=..
T Consensus 208 ldiGGG~~v~ 217 (265)
T d1hkva2 208 VDLGGGLGIS 217 (265)
T ss_dssp EECCCCBCCC
T ss_pred eeecCCCCcc
Confidence 4999998655
No 9
>d1j7ga_ c.110.1.1 (A:) D-Tyr tRNAtyr deacylase, DTD {Haemophilus influenzae [TaxId: 727]}
Probab=13.59 E-value=78 Score=21.37 Aligned_cols=26 Identities=19% Similarity=0.215 Sum_probs=21.3
Q ss_pred eeecCCeeEEEE------echhhhHhHHHhhh
Q 033380 56 EGDIGGGGCLWI------SAKVWHLLIDLMSR 81 (120)
Q Consensus 56 EgDIGGGLvl~I------~~~~~~iLvD~lvn 81 (120)
-+.||=||++-| +++.+.-+++|+.|
T Consensus 20 v~~I~~Gl~vlvgi~~~D~~~~~~~~~~Kil~ 51 (144)
T d1j7ga_ 20 IGKIGKGLLVLLGVEKEDNREKADKLAEKVLN 51 (144)
T ss_dssp EEEESSEEEEEEECBTTCCHHHHHHHHHHHHH
T ss_pred EEEECCCcEEEEEEcCCCChHHHHHHHHHHhh
Confidence 478999999985 78888889999654
No 10
>d1tiea_ b.42.4.1 (A:) Erythrina cafra trypsin inhibitor {Erythrina caffra [TaxId: 3842]}
Probab=13.37 E-value=77 Score=21.30 Aligned_cols=9 Identities=44% Similarity=0.457 Sum_probs=7.2
Q ss_pred ecCCeeEEE
Q 033380 58 DIGGGGCLW 66 (120)
Q Consensus 58 DIGGGLvl~ 66 (120)
+-||||.|+
T Consensus 24 g~GGGltl~ 32 (170)
T d1tiea_ 24 AQGGGVQLA 32 (170)
T ss_dssp GGCCCEEEE
T ss_pred CCCCCEEEe
Confidence 359999887
Done!