Query 033385
Match_columns 120
No_of_seqs 129 out of 1073
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 22:12:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033385.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033385hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fo3_A Ubiquitin-conjugating e 100.0 2.4E-46 8.4E-51 244.2 14.2 117 4-120 5-122 (125)
2 2h2y_A Ubiquitin-conjugating e 100.0 1.2E-45 4.2E-50 243.9 16.2 117 4-120 19-136 (136)
3 1ayz_A UBC2, ubiquitin-conjuga 100.0 1.6E-45 5.5E-50 251.1 15.0 118 1-119 1-118 (169)
4 4gpr_A Ubiquitin-conjugating e 100.0 2.6E-45 9E-50 246.2 15.1 118 3-120 2-119 (151)
5 3rz3_A Ubiquitin-conjugating e 100.0 2.8E-45 9.7E-50 252.7 15.6 119 1-119 3-135 (183)
6 2ayv_A Ubiquitin-conjugating e 100.0 6.1E-45 2.1E-49 247.6 16.1 117 4-120 20-136 (166)
7 2e2c_A Ubiquitin conjugating e 100.0 5.4E-45 1.9E-49 245.8 15.7 116 4-119 8-123 (156)
8 2aak_A UBC1, ubiquitin conjuga 100.0 5E-45 1.7E-49 245.0 15.2 118 1-119 1-118 (152)
9 2ucz_A UBC7, ubiquitin conjuga 100.0 3.9E-45 1.3E-49 248.4 14.6 118 1-119 1-132 (165)
10 2c2v_B Ubiquitin-conjugating e 100.0 2.8E-45 9.5E-50 246.7 13.7 117 4-120 4-120 (154)
11 1z2u_A Ubiquitin-conjugating e 100.0 5.4E-45 1.8E-49 244.4 15.0 117 3-119 2-118 (150)
12 2r0j_A Ubiquitin carrier prote 100.0 5.3E-45 1.8E-49 244.2 14.0 113 7-119 3-115 (149)
13 2c4o_A Ubiquitin-conjugating e 100.0 1.1E-44 3.6E-49 246.3 15.4 116 4-119 18-133 (165)
14 1jat_A Ubiquitin-conjugating e 100.0 6.5E-45 2.2E-49 245.2 13.9 116 4-119 4-119 (155)
15 1zdn_A Ubiquitin-conjugating e 100.0 6E-45 2.1E-49 246.0 13.7 116 4-119 12-127 (158)
16 1yh2_A HSPC150 protein similar 100.0 1.5E-44 5.2E-49 246.3 15.4 117 3-119 2-122 (169)
17 3h8k_A Ubiquitin-conjugating e 100.0 2E-44 6.9E-49 244.7 15.8 116 4-119 2-131 (164)
18 1i7k_A Ubiquitin-conjugating e 100.0 1.3E-44 4.4E-49 248.4 13.8 117 3-119 28-144 (179)
19 2awf_A Ubiquitin-conjugating e 100.0 5E-44 1.7E-48 244.4 15.8 118 2-119 14-145 (172)
20 2a7l_A Hypothetical ubiquitin- 100.0 2.4E-44 8.1E-49 237.6 13.2 113 1-115 20-136 (136)
21 1fxt_A Ubiquitin-conjugating e 100.0 1.6E-44 5.5E-49 241.8 12.6 115 6-120 2-118 (149)
22 3rcz_B SUMO-conjugating enzyme 100.0 3.6E-44 1.2E-48 243.1 14.1 117 3-119 8-131 (163)
23 1yrv_A Ubiquitin-conjugating l 100.0 1.7E-44 5.8E-49 246.0 12.5 119 1-120 20-141 (169)
24 2f4z_A Tgtwinscan_2721 - E2 do 100.0 7.8E-44 2.7E-48 247.0 14.5 118 3-120 30-161 (193)
25 2bep_A Ubiquitin-conjugating e 100.0 1.4E-43 4.8E-48 239.5 15.3 116 5-120 8-127 (159)
26 3bzh_A Ubiquitin-conjugating e 100.0 1.5E-43 5.3E-48 245.7 15.4 115 5-119 48-162 (194)
27 2gjd_A Ubiquitin-conjugating e 100.0 1.1E-43 3.6E-48 239.7 13.6 118 1-119 1-125 (157)
28 2pwq_A Ubiquitin conjugating e 100.0 9.4E-44 3.2E-48 250.2 13.5 117 4-120 22-139 (216)
29 3k9o_A Ubiquitin-conjugating e 100.0 3.2E-43 1.1E-47 245.7 15.3 119 1-120 2-124 (201)
30 1wzv_A Ubiquitin-conjugating e 100.0 6.6E-43 2.3E-47 235.4 13.6 115 5-120 4-120 (155)
31 2grr_A Ubiquitin-conjugating e 100.0 5.2E-43 1.8E-47 237.2 13.1 115 5-119 7-128 (161)
32 1jat_B Ubiquitin-conjugating e 100.0 3.6E-43 1.2E-47 232.6 11.7 118 1-119 2-126 (138)
33 2q0v_A Ubiquitin-conjugating e 100.0 3E-42 1E-46 232.2 14.3 118 2-120 18-142 (156)
34 2a4d_A Ubiquitin-conjugating e 100.0 3.6E-42 1.2E-46 232.4 14.5 116 4-119 24-147 (160)
35 1y8x_A Ubiquitin-conjugating e 100.0 3.3E-42 1.1E-46 232.9 14.0 113 4-119 5-118 (160)
36 1tte_A Ubiquitin-conjugating e 100.0 4.3E-43 1.5E-47 246.7 9.5 116 5-120 2-119 (215)
37 3e46_A Ubiquitin-conjugating e 100.0 5.5E-42 1.9E-46 245.9 14.6 116 5-120 57-176 (253)
38 2nvu_C NEDD8-conjugating enzym 100.0 5.6E-42 1.9E-46 235.6 13.4 113 4-119 25-138 (180)
39 2y9m_A Ubiquitin-conjugating e 100.0 1.6E-41 5.3E-46 232.0 14.6 116 5-120 6-136 (172)
40 3fn1_B NEDD8-conjugating enzym 100.0 1.4E-41 4.9E-46 231.3 14.3 115 4-119 13-135 (167)
41 2hlw_A Ubiquitin-conjugating e 100.0 1.3E-41 4.3E-46 231.9 12.3 116 4-119 34-157 (170)
42 1c4z_D UBCH7, ubiquitin conjug 100.0 9.1E-42 3.1E-46 229.6 10.9 113 6-119 3-117 (154)
43 2onu_A Ubiquitin-conjugating e 100.0 3.3E-42 1.1E-46 231.3 7.5 112 5-119 2-115 (152)
44 2z5d_A Ubiquitin-conjugating e 100.0 6.6E-42 2.3E-46 234.8 8.9 116 1-120 20-138 (179)
45 2f4w_A Ubiquitin-conjugating e 100.0 1.1E-40 3.9E-45 230.3 14.2 116 3-120 12-130 (187)
46 3o2u_A NEDD8-conjugating enzym 100.0 2E-40 7E-45 229.5 13.5 114 4-120 28-148 (190)
47 4ddg_A Ubiquitin-conjugating e 100.0 2.3E-40 8E-45 251.0 14.7 116 5-120 3-118 (399)
48 1yf9_A Ubiquitin carrier prote 100.0 5.4E-41 1.8E-45 229.1 10.0 111 5-119 12-124 (171)
49 4ds2_A Ubiquitin-conjugating e 100.0 1.6E-40 5.3E-45 226.2 11.1 115 1-116 5-134 (167)
50 1zuo_A Hypothetical protein LO 100.0 5.6E-41 1.9E-45 231.6 8.8 117 3-119 25-158 (186)
51 3ceg_A Baculoviral IAP repeat- 100.0 7.9E-39 2.7E-43 235.5 13.8 117 3-119 74-207 (323)
52 2z6o_A UFM1-conjugating enzyme 100.0 2.9E-31 1E-35 177.7 1.9 97 6-108 33-144 (172)
53 3r3q_A Suppressor protein STP2 99.9 1.1E-21 3.6E-26 132.1 10.2 112 7-119 30-159 (162)
54 3kpa_A Probable ubiquitin fold 99.8 3.7E-22 1.3E-26 131.1 -0.3 87 6-101 35-132 (168)
55 3obq_A Tumor susceptibility ge 99.7 3.2E-16 1.1E-20 103.8 7.4 81 31-117 50-139 (146)
56 2ebm_A RWD domain-containing p 97.0 0.0082 2.8E-07 37.9 9.1 68 6-75 11-78 (128)
57 3zqs_A E3 ubiquitin-protein li 96.8 0.014 4.9E-07 39.6 9.5 83 8-115 4-87 (186)
58 2day_A Ring finger protein 25; 96.8 0.012 4.1E-07 37.2 8.3 107 8-118 11-126 (128)
59 2yz0_A Serine/threonine-protei 96.8 0.027 9.2E-07 36.0 10.1 66 9-76 14-86 (138)
60 1ukx_A GCN2, GCN2 EIF2alpha ki 95.1 0.23 7.8E-06 31.4 8.7 68 7-75 12-86 (137)
61 2ebk_A RWD domain-containing p 95.0 0.08 2.7E-06 33.3 6.1 67 8-75 10-79 (128)
62 2daw_A RWD domain containing p 93.8 0.13 4.5E-06 33.5 5.3 24 53-76 76-99 (154)
63 2dax_A Protein C21ORF6; RWD do 92.6 0.084 2.9E-06 34.3 2.8 25 52-76 73-97 (152)
64 3u3c_B Paxillin LD2 peptide; 4 86.4 0.54 1.8E-05 20.8 2.0 23 3-25 3-25 (26)
65 2bum_A Protocatechuate 3,4-dio 45.0 24 0.00082 24.0 3.6 25 50-74 109-138 (209)
66 2c5k_P Vacuolar protein sortin 37.6 16 0.00054 16.4 1.2 14 6-19 11-24 (26)
67 3rls_A YAF9, protein AF-9 homo 36.4 92 0.0032 20.6 6.2 43 32-76 30-72 (175)
68 3pft_A Flavin reductase; desul 36.0 22 0.00077 22.6 2.3 30 66-95 42-74 (157)
69 1m46_B IQ4, IQ4 motif from MYO 32.1 37 0.0013 14.7 2.0 13 6-18 9-21 (26)
70 2rf4_B DNA-directed RNA polyme 32.0 20 0.00069 21.0 1.4 13 5-17 62-74 (87)
71 1ogy_B Diheme cytochrome C NAP 30.5 21 0.00073 22.6 1.4 35 57-93 28-62 (130)
72 2bum_B Protocatechuate 3,4-dio 27.3 39 0.0013 23.5 2.4 25 50-74 134-165 (241)
73 3t63_A 3,4-PCD, protocatechuat 26.9 46 0.0016 22.5 2.7 23 52-74 102-129 (200)
74 3qrl_A Transcription initiatio 26.4 1.3E+02 0.0044 19.2 5.9 44 33-78 31-77 (140)
75 3g9r_A Fusion complex of HIV-1 26.1 48 0.0016 16.4 1.9 15 5-19 28-42 (42)
76 3t63_M 3,4-PCD, protocatechuat 25.8 43 0.0015 23.3 2.4 24 51-74 134-164 (238)
77 2xsu_A Catechol 1,2 dioxygenas 25.8 41 0.0014 24.4 2.4 24 51-74 188-229 (312)
78 2ccv_A Helix pomatia agglutini 25.6 83 0.0029 18.6 3.4 25 51-76 28-52 (101)
79 2azq_A Catechol 1,2-dioxygenas 24.9 44 0.0015 24.2 2.4 24 51-74 184-225 (311)
80 1tmx_A Hydroxyquinol 1,2-dioxy 24.3 46 0.0016 23.9 2.4 25 50-74 183-225 (293)
81 3n9t_A PNPC; phospholipid bind 23.4 49 0.0017 23.7 2.4 24 51-74 181-222 (290)
82 2yzh_A Probable thiol peroxida 23.3 52 0.0018 20.5 2.4 33 82-114 139-171 (171)
83 2ecu_A Flavin reductase (HPAC) 23.3 20 0.00068 22.6 0.3 31 66-96 40-73 (149)
84 1u9d_A Hypothetical protein VC 23.0 1.4E+02 0.0048 18.4 4.6 28 6-33 32-59 (122)
85 2boy_A 3-chlorocatechol 1,2-di 22.4 54 0.0019 23.0 2.4 24 51-74 154-195 (254)
86 1dmh_A 1,2-CTD, catechol 1,2-d 21.8 56 0.0019 23.7 2.4 24 51-74 187-228 (311)
87 2d37_A Hypothetical NADH-depen 20.8 41 0.0014 21.9 1.5 30 65-94 59-91 (176)
88 3hhy_A 1,2-CTD, catechol 1,2-d 20.7 55 0.0019 23.4 2.2 24 51-74 183-224 (280)
89 4hx6_A Oxidoreductase; structu 20.7 27 0.00092 23.0 0.6 30 66-95 57-89 (185)
No 1
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=2.4e-46 Score=244.16 Aligned_cols=117 Identities=31% Similarity=0.535 Sum_probs=106.4
Q ss_pred CchHHHHHHHHHHHhhCCCCCeEEEecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccC-ccccc
Q 033385 4 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKI-YHPNI 82 (120)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i-~hPnv 82 (120)
.++.+||++|+++++++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ |||||
T Consensus 5 ~~a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv 84 (125)
T 2fo3_A 5 GNANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTHV 84 (125)
T ss_dssp ----CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTTB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCcC
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999996 99999
Q ss_pred cCCCcEecccCCCCCCccCcHHHHHHHHHHhhcCCCCC
Q 033385 83 DKLGRICLDILKDKWSPALQIRTVLLRGEYFLFSRGRT 120 (120)
Q Consensus 83 ~~~G~vcl~~l~~~W~p~~~v~~vl~~i~~~l~~~~~~ 120 (120)
+.+|+||+++|.++|+|++++++||.+|+++|.+|+++
T Consensus 85 ~~~G~iCl~iL~~~W~P~~~i~~vl~si~~ll~~p~~~ 122 (125)
T 2fo3_A 85 YSNGDICLSLLGDDYNPSLSISGLVLSIISMLSSAKEK 122 (125)
T ss_dssp CTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHC-----
T ss_pred CCCCEEEchhcCCCCCCCCcHHHHHHHHHHHHhCcccc
Confidence 99999999999999999999999999999999999864
No 2
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.2e-45 Score=243.91 Aligned_cols=117 Identities=30% Similarity=0.523 Sum_probs=112.6
Q ss_pred CchHHHHHHHHHHHhhCCCCCeEEEecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccC-ccccc
Q 033385 4 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKI-YHPNI 82 (120)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i-~hPnv 82 (120)
..+.+||++|+++++++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ |||||
T Consensus 19 ~~~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv 98 (136)
T 2h2y_A 19 GNANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHV 98 (136)
T ss_dssp TSHHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTTB
T ss_pred hHHHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999996 99999
Q ss_pred cCCCcEecccCCCCCCccCcHHHHHHHHHHhhcCCCCC
Q 033385 83 DKLGRICLDILKDKWSPALQIRTVLLRGEYFLFSRGRT 120 (120)
Q Consensus 83 ~~~G~vcl~~l~~~W~p~~~v~~vl~~i~~~l~~~~~~ 120 (120)
+.+|+||+++|.++|+|++++++||.+|+++|.+|+.|
T Consensus 99 ~~~G~ICl~iL~~~WsP~~ti~~vL~si~sll~~p~~k 136 (136)
T 2h2y_A 99 YSNGDICLSVLGDDYNPSLSISGLILSIISMLSSAKEK 136 (136)
T ss_dssp CTTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHSSSCC-
T ss_pred CCCCEEECccccCCCCCCCcHHHHHHHHHHHHhCcCcC
Confidence 99999999999999999999999999999999999875
No 3
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.6e-45 Score=251.07 Aligned_cols=118 Identities=38% Similarity=0.810 Sum_probs=113.6
Q ss_pred CCCCchHHHHHHHHHHHhhCCCCCeEEEecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCccc
Q 033385 1 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHP 80 (120)
Q Consensus 1 ma~~~~~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hP 80 (120)
||+ .+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 1 Ms~-~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HP 79 (169)
T 1ayz_A 1 MST-PARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHP 79 (169)
T ss_dssp -CC-HHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCT
T ss_pred CCh-HHHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccC
Confidence 665 5679999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCcEecccCCCCCCccCcHHHHHHHHHHhhcCCCC
Q 033385 81 NIDKLGRICLDILKDKWSPALQIRTVLLRGEYFLFSRGR 119 (120)
Q Consensus 81 nv~~~G~vcl~~l~~~W~p~~~v~~vl~~i~~~l~~~~~ 119 (120)
||+.+|.||+++|.++|+|+++|++||.+|+++|.+|++
T Consensus 80 NI~~~G~ICl~iL~~~WsP~~~i~~vL~si~~ll~~Pn~ 118 (169)
T 1ayz_A 80 NVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNP 118 (169)
T ss_dssp TBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHTCCCC
T ss_pred CCCCCCeEeehhhccCCCCcCcHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999999999999999987
No 4
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=2.6e-45 Score=246.16 Aligned_cols=118 Identities=45% Similarity=0.808 Sum_probs=114.0
Q ss_pred CCchHHHHHHHHHHHhhCCCCCeEEEecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCccccc
Q 033385 3 NSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 82 (120)
Q Consensus 3 ~~~~~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hPnv 82 (120)
+..+.|||++|+++++++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 2 a~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 81 (151)
T 4gpr_A 2 AAMAMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNI 81 (151)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceE
Confidence 44678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEecccCCCCCCccCcHHHHHHHHHHhhcCCCCC
Q 033385 83 DKLGRICLDILKDKWSPALQIRTVLLRGEYFLFSRGRT 120 (120)
Q Consensus 83 ~~~G~vcl~~l~~~W~p~~~v~~vl~~i~~~l~~~~~~ 120 (120)
+.+|+||+++|.++|+|++++++||.+|+++|.+||+.
T Consensus 82 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~ 119 (151)
T 4gpr_A 82 NKNGVICLDILKDQWSPALTLSRVLLSISSLLTDPNPS 119 (151)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHCCCTT
T ss_pred CCCCEEEcccccCCCCCCCcHHHHHHHHHHHhcCCCCC
Confidence 99999999999999999999999999999999999873
No 5
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=2.8e-45 Score=252.73 Aligned_cols=119 Identities=35% Similarity=0.718 Sum_probs=113.1
Q ss_pred CCCCchHHHHHHHHHHHhhCCCCCeEEE-ecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCcc
Q 033385 1 MANSNLPRRIIKETQRLLSEPAPGISAS-PSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYH 79 (120)
Q Consensus 1 ma~~~~~~RL~~E~~~l~~~~~~~~~~~-~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~h 79 (120)
||+..+.|||++|++++++++++|+++. ++++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 3 m~~~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 82 (183)
T 3rz3_A 3 MGSPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWH 82 (183)
T ss_dssp --CCHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCC
T ss_pred CcchHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCcc
Confidence 8888999999999999999999999999 678899999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcEecccCC-------------CCCCccCcHHHHHHHHHHhhcCCCC
Q 033385 80 PNIDKLGRICLDILK-------------DKWSPALQIRTVLLRGEYFLFSRGR 119 (120)
Q Consensus 80 Pnv~~~G~vcl~~l~-------------~~W~p~~~v~~vl~~i~~~l~~~~~ 119 (120)
|||+.+|.||+++|. ++|+|+++|++||++|+++|.+||+
T Consensus 83 PnV~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~ 135 (183)
T 3rz3_A 83 PNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNT 135 (183)
T ss_dssp TTBCTTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCC
T ss_pred CCCCCCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCC
Confidence 999999999999996 8899999999999999999999987
No 6
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=6.1e-45 Score=247.59 Aligned_cols=117 Identities=48% Similarity=0.827 Sum_probs=113.3
Q ss_pred CchHHHHHHHHHHHhhCCCCCeEEEecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCcccccc
Q 033385 4 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID 83 (120)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hPnv~ 83 (120)
..+.+||++|++++++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 20 ~~~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~ 99 (166)
T 2ayv_A 20 QGALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNIN 99 (166)
T ss_dssp TTHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcCC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEecccCCCCCCccCcHHHHHHHHHHhhcCCCCC
Q 033385 84 KLGRICLDILKDKWSPALQIRTVLLRGEYFLFSRGRT 120 (120)
Q Consensus 84 ~~G~vcl~~l~~~W~p~~~v~~vl~~i~~~l~~~~~~ 120 (120)
.+|.||+++|.++|+|+++|++||.+|+++|.+|++.
T Consensus 100 ~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pn~~ 136 (166)
T 2ayv_A 100 SQGAICLDILKDQWSPALTISKVLLSISSLLTDPNPD 136 (166)
T ss_dssp TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTT
T ss_pred CCCeEEcccccccCCCCCcHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999999999999999873
No 7
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=5.4e-45 Score=245.77 Aligned_cols=116 Identities=37% Similarity=0.697 Sum_probs=112.8
Q ss_pred CchHHHHHHHHHHHhhCCCCCeEEEecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCcccccc
Q 033385 4 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID 83 (120)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hPnv~ 83 (120)
..+.+||++|++++++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 8 ~~~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 87 (156)
T 2e2c_A 8 HSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVD 87 (156)
T ss_dssp CCHHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCCc
Confidence 45889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEecccCCCCCCccCcHHHHHHHHHHhhcCCCC
Q 033385 84 KLGRICLDILKDKWSPALQIRTVLLRGEYFLFSRGR 119 (120)
Q Consensus 84 ~~G~vcl~~l~~~W~p~~~v~~vl~~i~~~l~~~~~ 119 (120)
.+|.||+++|.++|+|++++++||.+|+++|.+|++
T Consensus 88 ~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~pn~ 123 (156)
T 2e2c_A 88 QSGNICLDILKENWTASYDVRTILLSLQSLLGEPNN 123 (156)
T ss_dssp TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHTTSCCC
T ss_pred cCceEECccccccCCCCCcHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999999999999986
No 8
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=5e-45 Score=245.03 Aligned_cols=118 Identities=37% Similarity=0.830 Sum_probs=114.1
Q ss_pred CCCCchHHHHHHHHHHHhhCCCCCeEEEecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCccc
Q 033385 1 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHP 80 (120)
Q Consensus 1 ma~~~~~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hP 80 (120)
|++ .+.+||++|++++++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 1 Ms~-~a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 79 (152)
T 2aak_A 1 MST-PARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHP 79 (152)
T ss_dssp CCC-HHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCT
T ss_pred CCh-HHHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccC
Confidence 665 5679999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCcEecccCCCCCCccCcHHHHHHHHHHhhcCCCC
Q 033385 81 NIDKLGRICLDILKDKWSPALQIRTVLLRGEYFLFSRGR 119 (120)
Q Consensus 81 nv~~~G~vcl~~l~~~W~p~~~v~~vl~~i~~~l~~~~~ 119 (120)
||+.+|.||+++|.++|+|++++++||.+|+++|.+|++
T Consensus 80 nv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~ 118 (152)
T 2aak_A 80 NIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP 118 (152)
T ss_dssp TBCTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHTSCCT
T ss_pred CCCCCCEEechhhcCCCCCCCcHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999999999999999987
No 9
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=3.9e-45 Score=248.44 Aligned_cols=118 Identities=36% Similarity=0.768 Sum_probs=112.2
Q ss_pred CCCCchHHHHHHHHHHHhhCCCCCeEEEecC-CCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCcc
Q 033385 1 MANSNLPRRIIKETQRLLSEPAPGISASPSE-DNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYH 79 (120)
Q Consensus 1 ma~~~~~~RL~~E~~~l~~~~~~~~~~~~~~-~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~h 79 (120)
||+ .+.|||++|+++|++++++|+++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 1 M~~-~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 79 (165)
T 2ucz_A 1 MSK-TAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILH 79 (165)
T ss_dssp -CH-HHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSC
T ss_pred CCh-HHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCcc
Confidence 776 677999999999999999999999865 799999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcEecccC-------------CCCCCccCcHHHHHHHHHHhhcCCCC
Q 033385 80 PNIDKLGRICLDIL-------------KDKWSPALQIRTVLLRGEYFLFSRGR 119 (120)
Q Consensus 80 Pnv~~~G~vcl~~l-------------~~~W~p~~~v~~vl~~i~~~l~~~~~ 119 (120)
|||+.+|+||+++| .++|+|+++|++||.+|+++|.+|++
T Consensus 80 PNv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~ 132 (165)
T 2ucz_A 80 PNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNI 132 (165)
T ss_dssp TTBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCG
T ss_pred CCCCCCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCC
Confidence 99999999999999 68999999999999999999999986
No 10
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.8e-45 Score=246.72 Aligned_cols=117 Identities=75% Similarity=1.246 Sum_probs=113.0
Q ss_pred CchHHHHHHHHHHHhhCCCCCeEEEecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCcccccc
Q 033385 4 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID 83 (120)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hPnv~ 83 (120)
.++.+||++|++++++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 4 ~~~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 83 (154)
T 2c2v_B 4 AGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVD 83 (154)
T ss_dssp CSCCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcCc
Confidence 35679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEecccCCCCCCccCcHHHHHHHHHHhhcCCCCC
Q 033385 84 KLGRICLDILKDKWSPALQIRTVLLRGEYFLFSRGRT 120 (120)
Q Consensus 84 ~~G~vcl~~l~~~W~p~~~v~~vl~~i~~~l~~~~~~ 120 (120)
.+|.||+++|.++|+|++++++||.+|+++|.+|++.
T Consensus 84 ~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~ 120 (154)
T 2c2v_B 84 KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120 (154)
T ss_dssp TTCBBCCHHHHTSCCTTCCHHHHHHHHHHHTTSCCCC
T ss_pred cCCeEEchhccCCCCCCCcHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999999999999999873
No 11
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=5.4e-45 Score=244.40 Aligned_cols=117 Identities=45% Similarity=0.793 Sum_probs=113.4
Q ss_pred CCchHHHHHHHHHHHhhCCCCCeEEEecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCccccc
Q 033385 3 NSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 82 (120)
Q Consensus 3 ~~~~~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hPnv 82 (120)
+..+.|||++|++++++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 81 (150)
T 1z2u_A 2 SHMALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNI 81 (150)
T ss_dssp CCHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcC
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEecccCCCCCCccCcHHHHHHHHHHhhcCCCC
Q 033385 83 DKLGRICLDILKDKWSPALQIRTVLLRGEYFLFSRGR 119 (120)
Q Consensus 83 ~~~G~vcl~~l~~~W~p~~~v~~vl~~i~~~l~~~~~ 119 (120)
+.+|.||+++|.++|+|++++++||.+|+++|.+|++
T Consensus 82 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~ 118 (150)
T 1z2u_A 82 NSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNP 118 (150)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCT
T ss_pred CCCCeEeeccccCCCCCCCCHHHHHHHHHHHhhCCCC
Confidence 9999999999999999999999999999999999986
No 12
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=5.3e-45 Score=244.20 Aligned_cols=113 Identities=72% Similarity=1.173 Sum_probs=110.7
Q ss_pred HHHHHHHHHHHhhCCCCCeEEEecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCccccccCCC
Q 033385 7 PRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLG 86 (120)
Q Consensus 7 ~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hPnv~~~G 86 (120)
.|||++|++++++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+|
T Consensus 3 ~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G 82 (149)
T 2r0j_A 3 PRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKLG 82 (149)
T ss_dssp CHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCCC
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEecccCCCCCCccCcHHHHHHHHHHhhcCCCC
Q 033385 87 RICLDILKDKWSPALQIRTVLLRGEYFLFSRGR 119 (120)
Q Consensus 87 ~vcl~~l~~~W~p~~~v~~vl~~i~~~l~~~~~ 119 (120)
+||+++|.++|+|++++++||.+|+++|.+|++
T Consensus 83 ~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~ 115 (149)
T 2r0j_A 83 RICLDILKDKWSPALQIRTVLLSIQALLSSPEP 115 (149)
T ss_dssp BBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCT
T ss_pred EEechhcCCCCCCCCcHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999999999987
No 13
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=1.1e-44 Score=246.26 Aligned_cols=116 Identities=47% Similarity=0.809 Sum_probs=112.6
Q ss_pred CchHHHHHHHHHHHhhCCCCCeEEEecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCcccccc
Q 033385 4 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID 83 (120)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hPnv~ 83 (120)
..+.|||++|+++++++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 18 ~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~ 97 (165)
T 2c4o_A 18 SMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN 97 (165)
T ss_dssp HHHHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcCC
Confidence 34779999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEecccCCCCCCccCcHHHHHHHHHHhhcCCCC
Q 033385 84 KLGRICLDILKDKWSPALQIRTVLLRGEYFLFSRGR 119 (120)
Q Consensus 84 ~~G~vcl~~l~~~W~p~~~v~~vl~~i~~~l~~~~~ 119 (120)
.+|.||+++|.++|+|++++++||.+|+++|.+|++
T Consensus 98 ~~G~ICl~iL~~~W~P~~ti~~vL~si~~ll~~pn~ 133 (165)
T 2c4o_A 98 SNGSICLDILRSQWSPALTISKVLLSICSLLCDPNP 133 (165)
T ss_dssp TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCT
T ss_pred CCCeEeehhhcCCCCCcCcHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999999999999987
No 14
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=6.5e-45 Score=245.17 Aligned_cols=116 Identities=68% Similarity=1.213 Sum_probs=112.4
Q ss_pred CchHHHHHHHHHHHhhCCCCCeEEEecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCcccccc
Q 033385 4 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID 83 (120)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hPnv~ 83 (120)
..+.+||++|++++++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 4 ~~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 83 (155)
T 1jat_A 4 ASLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNID 83 (155)
T ss_dssp CSCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBC
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCC
Confidence 35669999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEecccCCCCCCccCcHHHHHHHHHHhhcCCCC
Q 033385 84 KLGRICLDILKDKWSPALQIRTVLLRGEYFLFSRGR 119 (120)
Q Consensus 84 ~~G~vcl~~l~~~W~p~~~v~~vl~~i~~~l~~~~~ 119 (120)
.+|.||+++|.++|+|++++++||.+|+++|.+|++
T Consensus 84 ~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~ 119 (155)
T 1jat_A 84 RLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNP 119 (155)
T ss_dssp TTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCT
T ss_pred CCCEEEchhhccCCCCCCCHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999999999999986
No 15
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6e-45 Score=246.00 Aligned_cols=116 Identities=38% Similarity=0.772 Sum_probs=112.6
Q ss_pred CchHHHHHHHHHHHhhCCCCCeEEEecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCcccccc
Q 033385 4 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID 83 (120)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hPnv~ 83 (120)
..+.|||++|++++++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 12 ~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 91 (158)
T 1zdn_A 12 PHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVG 91 (158)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCCC
Confidence 35779999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEecccCCCCCCccCcHHHHHHHHHHhhcCCCC
Q 033385 84 KLGRICLDILKDKWSPALQIRTVLLRGEYFLFSRGR 119 (120)
Q Consensus 84 ~~G~vcl~~l~~~W~p~~~v~~vl~~i~~~l~~~~~ 119 (120)
.+|.||+++|.++|+|++++++||.+|+++|.+||+
T Consensus 92 ~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~ 127 (158)
T 1zdn_A 92 ANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNP 127 (158)
T ss_dssp TTSBBCHHHHTTTCCTTCCHHHHHHHHHHHHHSCCG
T ss_pred CCCEEehhhcCCCCCCCCcHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999999999999986
No 16
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-44 Score=246.35 Aligned_cols=117 Identities=45% Similarity=0.841 Sum_probs=113.5
Q ss_pred CCchHHHHHHHHHHHhhCCCCCeEEEecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCccccc
Q 033385 3 NSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 82 (120)
Q Consensus 3 ~~~~~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hPnv 82 (120)
+.++.+||++|++++++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv 81 (169)
T 1yh2_A 2 SMQRASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNI 81 (169)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccC
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEecccCC----CCCCccCcHHHHHHHHHHhhcCCCC
Q 033385 83 DKLGRICLDILK----DKWSPALQIRTVLLRGEYFLFSRGR 119 (120)
Q Consensus 83 ~~~G~vcl~~l~----~~W~p~~~v~~vl~~i~~~l~~~~~ 119 (120)
+.+|.||+++|. ++|+|++++++||.+|+++|.+|++
T Consensus 82 ~~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~ 122 (169)
T 1yh2_A 82 DSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNP 122 (169)
T ss_dssp CTTCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCT
T ss_pred CcCCeEecccccCCcccCCCCCCcHHHHHHHHHHHHhCCCC
Confidence 999999999998 8999999999999999999999987
No 17
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=2e-44 Score=244.73 Aligned_cols=116 Identities=34% Similarity=0.690 Sum_probs=111.5
Q ss_pred CchHHHHHHHHHHHhhCCCCCeEEEecCC-CCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCccccc
Q 033385 4 SNLPRRIIKETQRLLSEPAPGISASPSED-NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 82 (120)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~~~~~~~~~~-~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hPnv 82 (120)
..+.|||++|++++++++++|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 2 ~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV 81 (164)
T 3h8k_A 2 GTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNI 81 (164)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTB
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCC
Confidence 46789999999999999999999998765 99999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEecccCC-------------CCCCccCcHHHHHHHHHHhhcCCCC
Q 033385 83 DKLGRICLDILK-------------DKWSPALQIRTVLLRGEYFLFSRGR 119 (120)
Q Consensus 83 ~~~G~vcl~~l~-------------~~W~p~~~v~~vl~~i~~~l~~~~~ 119 (120)
+.+|+||+++|. ++|+|+++|++||.+|+++|.+||+
T Consensus 82 ~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~ 131 (164)
T 3h8k_A 82 YPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPND 131 (164)
T ss_dssp CTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCC
T ss_pred CCCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCC
Confidence 999999999996 7899999999999999999999987
No 18
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-44 Score=248.41 Aligned_cols=117 Identities=39% Similarity=0.613 Sum_probs=112.3
Q ss_pred CCchHHHHHHHHHHHhhCCCCCeEEEecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCccccc
Q 033385 3 NSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 82 (120)
Q Consensus 3 ~~~~~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hPnv 82 (120)
+..+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 28 ~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV 107 (179)
T 1i7k_A 28 RGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNV 107 (179)
T ss_dssp --CHHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTB
T ss_pred ChHHHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCcc
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEecccCCCCCCccCcHHHHHHHHHHhhcCCCC
Q 033385 83 DKLGRICLDILKDKWSPALQIRTVLLRGEYFLFSRGR 119 (120)
Q Consensus 83 ~~~G~vcl~~l~~~W~p~~~v~~vl~~i~~~l~~~~~ 119 (120)
+.+|.||+++|.++|+|++++++||.+|+++|.+|++
T Consensus 108 ~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~Pn~ 144 (179)
T 1i7k_A 108 DTQGNISLDILKEKWSALYDVRTILLSIQSLLGEPNI 144 (179)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCT
T ss_pred ccCCeEEcccCcCcCCCCCCHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999986
No 19
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=5e-44 Score=244.35 Aligned_cols=118 Identities=32% Similarity=0.693 Sum_probs=110.8
Q ss_pred CCCchHHHHHHHHHHHhhCCCCCeEEEecC-CCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCccc
Q 033385 2 ANSNLPRRIIKETQRLLSEPAPGISASPSE-DNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHP 80 (120)
Q Consensus 2 a~~~~~~RL~~E~~~l~~~~~~~~~~~~~~-~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hP 80 (120)
++..+.|||++|+++|++++++|+++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 14 ~~~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HP 93 (172)
T 2awf_A 14 LVPRGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHP 93 (172)
T ss_dssp CCCTTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCT
T ss_pred ChHHHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccC
Confidence 356788999999999999999999999865 7999999999999999999999999999999999999999999999999
Q ss_pred cccCCCcEecccCC-------------CCCCccCcHHHHHHHHHHhhcCCCC
Q 033385 81 NIDKLGRICLDILK-------------DKWSPALQIRTVLLRGEYFLFSRGR 119 (120)
Q Consensus 81 nv~~~G~vcl~~l~-------------~~W~p~~~v~~vl~~i~~~l~~~~~ 119 (120)
||+.+|+||+++|. ++|+|+++|++||.+|+++|.+|++
T Consensus 94 NV~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~ 145 (172)
T 2awf_A 94 NVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNG 145 (172)
T ss_dssp TBCTTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC--
T ss_pred CCCCCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCC
Confidence 99999999999996 6899999999999999999999986
No 20
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.4e-44 Score=237.56 Aligned_cols=113 Identities=33% Similarity=0.605 Sum_probs=106.9
Q ss_pred CCCCchHHHHHHHHHHHhhCCCCCeEEE--ecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCc
Q 033385 1 MANSNLPRRIIKETQRLLSEPAPGISAS--PSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIY 78 (120)
Q Consensus 1 ma~~~~~~RL~~E~~~l~~~~~~~~~~~--~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~ 78 (120)
||+. .|||++|++++++++++|+++. +.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 20 Ms~~--~~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~ 97 (136)
T 2a7l_A 20 MASM--QKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENI 97 (136)
T ss_dssp GTTS--CHHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCC
T ss_pred ccHH--HHHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCc
Confidence 5542 3999999999999999999965 78899999999999999999999999999999999999999999999999
Q ss_pred --cccccCCCcEecccCCCCCCccCcHHHHHHHHHHhhc
Q 033385 79 --HPNIDKLGRICLDILKDKWSPALQIRTVLLRGEYFLF 115 (120)
Q Consensus 79 --hPnv~~~G~vcl~~l~~~W~p~~~v~~vl~~i~~~l~ 115 (120)
||||+.+|+||+++|.++|+|++++++||.+|+++|.
T Consensus 98 ~~HPNV~~~G~ICL~iL~~~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 98 PVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp CCBTTBCTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHTC
T ss_pred CCCccCCCCCeEEchhcCCCCCCCCcHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999984
No 21
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=1.6e-44 Score=241.83 Aligned_cols=115 Identities=39% Similarity=0.754 Sum_probs=110.8
Q ss_pred hHHHHHHHHHHHhhCCCCCeEEEecCC-CCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCccccccC
Q 033385 6 LPRRIIKETQRLLSEPAPGISASPSED-NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK 84 (120)
Q Consensus 6 ~~~RL~~E~~~l~~~~~~~~~~~~~~~-~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hPnv~~ 84 (120)
+.+||++|++++++++++|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~ 81 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISS 81 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCS
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcC
Confidence 459999999999999999999999877 9999999999999999999999999999999999999999999999999998
Q ss_pred -CCcEecccCCCCCCccCcHHHHHHHHHHhhcCCCCC
Q 033385 85 -LGRICLDILKDKWSPALQIRTVLLRGEYFLFSRGRT 120 (120)
Q Consensus 85 -~G~vcl~~l~~~W~p~~~v~~vl~~i~~~l~~~~~~ 120 (120)
+|.||+++|.++|+|++++++||.+|+++|.+|++.
T Consensus 82 ~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~ 118 (149)
T 1fxt_A 82 VTGAICLDILKNAWSPVITLKSALISLQALLQSPEPN 118 (149)
T ss_dssp SSCCBCCHHHHTSCCTTCCHHHHHHHHHHHHHSCCSS
T ss_pred CCCeEeCCcCCCCCCCCCcHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999999999999863
No 22
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=3.6e-44 Score=243.14 Aligned_cols=117 Identities=32% Similarity=0.640 Sum_probs=111.3
Q ss_pred CCchHHHHHHHHHHHhhCCCCCeEEEecCC-----CCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccC
Q 033385 3 NSNLPRRIIKETQRLLSEPAPGISASPSED-----NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKI 77 (120)
Q Consensus 3 ~~~~~~RL~~E~~~l~~~~~~~~~~~~~~~-----~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i 77 (120)
+.++.+||++|++++++++++|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++
T Consensus 8 ~~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i 87 (163)
T 3rcz_B 8 SSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPL 87 (163)
T ss_dssp -CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCC
Confidence 467889999999999999999999998765 999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCcEecccCCC--CCCccCcHHHHHHHHHHhhcCCCC
Q 033385 78 YHPNIDKLGRICLDILKD--KWSPALQIRTVLLRGEYFLFSRGR 119 (120)
Q Consensus 78 ~hPnv~~~G~vcl~~l~~--~W~p~~~v~~vl~~i~~~l~~~~~ 119 (120)
|||||+.+|.||+++|.+ +|+|++++++||.+|+++|.+|++
T Consensus 88 ~HPnV~~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ll~~P~~ 131 (163)
T 3rcz_B 88 FHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNI 131 (163)
T ss_dssp CSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCT
T ss_pred ccCCCCCCCcEeccccCCCCCcCCcCcHHHHHHHHHHHHhCCCC
Confidence 999999999999999965 599999999999999999999986
No 23
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.7e-44 Score=245.97 Aligned_cols=119 Identities=29% Similarity=0.502 Sum_probs=113.4
Q ss_pred CCCCchHHHHHHHHHHHhhCCCCCeEEEecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCccc
Q 033385 1 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHP 80 (120)
Q Consensus 1 ma~~~~~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hP 80 (120)
|++ .+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 20 M~~-~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HP 98 (169)
T 1yrv_A 20 MHG-RAYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHP 98 (169)
T ss_dssp GGC-HHHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCT
T ss_pred cCh-HHHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccC
Confidence 444 5679999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cc-cCCCcEecccCC--CCCCccCcHHHHHHHHHHhhcCCCCC
Q 033385 81 NI-DKLGRICLDILK--DKWSPALQIRTVLLRGEYFLFSRGRT 120 (120)
Q Consensus 81 nv-~~~G~vcl~~l~--~~W~p~~~v~~vl~~i~~~l~~~~~~ 120 (120)
|| +.+|.||+++|. ++|+|++++++||.+|+++|.+|++.
T Consensus 99 NI~~~~G~ICL~iL~~~~~WsP~~ti~~vL~sI~sll~~Pn~~ 141 (169)
T 1yrv_A 99 NVDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLE 141 (169)
T ss_dssp TBCTTTCCBCCHHHHCGGGCCTTCCHHHHHHHHHHHHTSCCTT
T ss_pred cccCCCCeEeehhhcCCcCCCCcCCHHHHHHHHHHHHhCCCCC
Confidence 99 789999999997 89999999999999999999999873
No 24
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=7.8e-44 Score=246.98 Aligned_cols=118 Identities=42% Similarity=0.748 Sum_probs=109.1
Q ss_pred CCchHHHHHHHHHHHhhCCC-------------CCeEEEecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCC
Q 033385 3 NSNLPRRIIKETQRLLSEPA-------------PGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAP 69 (120)
Q Consensus 3 ~~~~~~RL~~E~~~l~~~~~-------------~~~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP 69 (120)
+..+.|||++|+++|+++++ .|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||
T Consensus 30 ~~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP 109 (193)
T 2f4z_A 30 TPREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPP 109 (193)
T ss_dssp --CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCC
T ss_pred CCHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCC
Confidence 34577999999999999876 79999999999999999999999999999999999999999999999
Q ss_pred eEEEeccCcccccc-CCCcEecccCCCCCCccCcHHHHHHHHHHhhcCCCCC
Q 033385 70 KVRFLTKIYHPNID-KLGRICLDILKDKWSPALQIRTVLLRGEYFLFSRGRT 120 (120)
Q Consensus 70 ~v~f~t~i~hPnv~-~~G~vcl~~l~~~W~p~~~v~~vl~~i~~~l~~~~~~ 120 (120)
+|+|.|++|||||+ .+|.||+++|.++|+|+++|++||.+|+++|.+|++.
T Consensus 110 ~V~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pnp~ 161 (193)
T 2f4z_A 110 KMKFVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALLSIQAMLADPVPT 161 (193)
T ss_dssp EEEESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTT
T ss_pred eEEEecCCccCCCcCCCCEEECccccccCCCCCCHHHHHHHHHHHHhCCCCC
Confidence 99999999999999 5999999999999999999999999999999999873
No 25
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=1.4e-43 Score=239.54 Aligned_cols=116 Identities=42% Similarity=0.757 Sum_probs=110.8
Q ss_pred chHHHHHHHHHHHhhC---CCCCeEEEecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCcccc
Q 033385 5 NLPRRIIKETQRLLSE---PAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPN 81 (120)
Q Consensus 5 ~~~~RL~~E~~~l~~~---~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hPn 81 (120)
.+.+||++|+++|+++ +..|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 8 ~a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 87 (159)
T 2bep_A 8 IAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPN 87 (159)
T ss_dssp HHHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCCccC
Confidence 4779999999999985 5789999999999999999999999999999999999999999999999999999999999
Q ss_pred ccC-CCcEecccCCCCCCccCcHHHHHHHHHHhhcCCCCC
Q 033385 82 IDK-LGRICLDILKDKWSPALQIRTVLLRGEYFLFSRGRT 120 (120)
Q Consensus 82 v~~-~G~vcl~~l~~~W~p~~~v~~vl~~i~~~l~~~~~~ 120 (120)
|+. +|.||+++|.++|+|++++++||.+|+++|.+|++.
T Consensus 88 i~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~ 127 (159)
T 2bep_A 88 ISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPD 127 (159)
T ss_dssp BCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTT
T ss_pred CCCCCCEEeChhhhccCCCCCcHHHHHHHHHHHHhCCCCC
Confidence 995 999999999999999999999999999999999873
No 26
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=1.5e-43 Score=245.75 Aligned_cols=115 Identities=48% Similarity=0.765 Sum_probs=112.1
Q ss_pred chHHHHHHHHHHHhhCCCCCeEEEecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCccccccC
Q 033385 5 NLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK 84 (120)
Q Consensus 5 ~~~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hPnv~~ 84 (120)
.+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 48 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~ 127 (194)
T 3bzh_A 48 TSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINS 127 (194)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceECC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEecccCCCCCCccCcHHHHHHHHHHhhcCCCC
Q 033385 85 LGRICLDILKDKWSPALQIRTVLLRGEYFLFSRGR 119 (120)
Q Consensus 85 ~G~vcl~~l~~~W~p~~~v~~vl~~i~~~l~~~~~ 119 (120)
+|.||+++|.++|+|+++|++||.+|+++|.+||+
T Consensus 128 ~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp 162 (194)
T 3bzh_A 128 QGVICLDILKDNWSPALTISKVLLSICSLLTDCNP 162 (194)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCT
T ss_pred CCceechhhhccCCCcCcHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999986
No 27
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=1.1e-43 Score=239.68 Aligned_cols=118 Identities=30% Similarity=0.593 Sum_probs=110.4
Q ss_pred CCCCchHHHHHHHHHHHhhCCCCCeEEEecC-----CCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEec
Q 033385 1 MANSNLPRRIIKETQRLLSEPAPGISASPSE-----DNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLT 75 (120)
Q Consensus 1 ma~~~~~~RL~~E~~~l~~~~~~~~~~~~~~-----~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t 75 (120)
||+ .+.|||++|++++++++++|+++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|
T Consensus 1 Ms~-~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 79 (157)
T 2gjd_A 1 MSS-LCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPA 79 (157)
T ss_dssp --C-HHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCT
T ss_pred CCh-HHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccC
Confidence 665 567999999999999999999998864 48999999999999999999999999999999999999999999
Q ss_pred cCccccccCCCcEecccCCC--CCCccCcHHHHHHHHHHhhcCCCC
Q 033385 76 KIYHPNIDKLGRICLDILKD--KWSPALQIRTVLLRGEYFLFSRGR 119 (120)
Q Consensus 76 ~i~hPnv~~~G~vcl~~l~~--~W~p~~~v~~vl~~i~~~l~~~~~ 119 (120)
++|||||+.+|.||+++|.+ +|+|++++++||.+|+++|.+|++
T Consensus 80 ~i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~ 125 (157)
T 2gjd_A 80 GFYHPNVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNP 125 (157)
T ss_dssp TCCCTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCT
T ss_pred CCccCCCCCCCcEeeecccCCCCCCCCCcHHHHHHHHHHHHhCCCC
Confidence 99999999999999999976 799999999999999999999986
No 28
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=9.4e-44 Score=250.21 Aligned_cols=117 Identities=42% Similarity=0.728 Sum_probs=112.8
Q ss_pred CchHHHHHHHHHHHhhCCCCCeEEEecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCcccccc
Q 033385 4 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID 83 (120)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hPnv~ 83 (120)
..+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 22 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~ 101 (216)
T 2pwq_A 22 SKELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNIS 101 (216)
T ss_dssp CHHHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCCc
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -CCCcEecccCCCCCCccCcHHHHHHHHHHhhcCCCCC
Q 033385 84 -KLGRICLDILKDKWSPALQIRTVLLRGEYFLFSRGRT 120 (120)
Q Consensus 84 -~~G~vcl~~l~~~W~p~~~v~~vl~~i~~~l~~~~~~ 120 (120)
.+|.||+++|.++|+|++++++||.+|+++|.+|+|.
T Consensus 102 ~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~ 139 (216)
T 2pwq_A 102 SQTGAICLDVLKNEWSPALTIRTALLSIQALLSDPQPD 139 (216)
T ss_dssp TTTCBBCCHHHHHHCCTTCCHHHHHHHHHHHHHSCCTT
T ss_pred CCCCEEEchhhcccCCCCCcHHHHHHHHHHHHhCCCCC
Confidence 5899999999999999999999999999999999873
No 29
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=3.2e-43 Score=245.65 Aligned_cols=119 Identities=44% Similarity=0.765 Sum_probs=111.2
Q ss_pred CCCCchHHHHHHHHHHHhhCC---CCCeEEEecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccC
Q 033385 1 MANSNLPRRIIKETQRLLSEP---APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKI 77 (120)
Q Consensus 1 ma~~~~~~RL~~E~~~l~~~~---~~~~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i 77 (120)
||+ .+.|||++|++++++++ +.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++
T Consensus 2 Ms~-~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i 80 (201)
T 3k9o_A 2 MAN-IAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKI 80 (201)
T ss_dssp --C-TTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred CcH-HHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCc
Confidence 666 45699999999999873 68999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccC-CCcEecccCCCCCCccCcHHHHHHHHHHhhcCCCCC
Q 033385 78 YHPNIDK-LGRICLDILKDKWSPALQIRTVLLRGEYFLFSRGRT 120 (120)
Q Consensus 78 ~hPnv~~-~G~vcl~~l~~~W~p~~~v~~vl~~i~~~l~~~~~~ 120 (120)
|||||+. +|.||+++|.++|+|++++++||.+|+++|.+|||.
T Consensus 81 ~HPnv~~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~p~p~ 124 (201)
T 3k9o_A 81 WHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPD 124 (201)
T ss_dssp CBTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTT
T ss_pred ccCCCcCCCCeeeCcccccCCCCCCCHHHHHHHHHHHhcCCCCC
Confidence 9999995 999999999999999999999999999999999973
No 30
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=6.6e-43 Score=235.35 Aligned_cols=115 Identities=33% Similarity=0.661 Sum_probs=110.4
Q ss_pred chHHHHHHHHHHHhhCCCCCeEE-EecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCcccccc
Q 033385 5 NLPRRIIKETQRLLSEPAPGISA-SPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID 83 (120)
Q Consensus 5 ~~~~RL~~E~~~l~~~~~~~~~~-~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hPnv~ 83 (120)
.+.+||++|++++++++++|+.+ .++++|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~ 82 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVD 82 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCC
Confidence 46799999999999999999999 788999999999999 9999999999999999999999999999999999999999
Q ss_pred CCCcEecccC-CCCCCccCcHHHHHHHHHHhhcCCCCC
Q 033385 84 KLGRICLDIL-KDKWSPALQIRTVLLRGEYFLFSRGRT 120 (120)
Q Consensus 84 ~~G~vcl~~l-~~~W~p~~~v~~vl~~i~~~l~~~~~~ 120 (120)
.+|.||+++| .++|+|++++++||.+|+++|.+|++.
T Consensus 83 ~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~ 120 (155)
T 1wzv_A 83 ENGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIR 120 (155)
T ss_dssp TTCBCCCGGGCTTTCCTTCCHHHHHHHHHHHHHSCCSS
T ss_pred CCCeEeecCCCccCCCCCCcHHHHHHHHHHHHhCCCCC
Confidence 9999999999 899999999999999999999999873
No 31
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=5.2e-43 Score=237.17 Aligned_cols=115 Identities=30% Similarity=0.639 Sum_probs=109.5
Q ss_pred chHHHHHHHHHHHhhCCCCCeEEEecC-----CCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCcc
Q 033385 5 NLPRRIIKETQRLLSEPAPGISASPSE-----DNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYH 79 (120)
Q Consensus 5 ~~~~RL~~E~~~l~~~~~~~~~~~~~~-----~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~h 79 (120)
.+.|||++|+++|++++++|+.+.+.. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 7 ~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 86 (161)
T 2grr_A 7 IALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFH 86 (161)
T ss_dssp HHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCS
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecCccc
Confidence 467999999999999999999998753 689999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcEecccCCC--CCCccCcHHHHHHHHHHhhcCCCC
Q 033385 80 PNIDKLGRICLDILKD--KWSPALQIRTVLLRGEYFLFSRGR 119 (120)
Q Consensus 80 Pnv~~~G~vcl~~l~~--~W~p~~~v~~vl~~i~~~l~~~~~ 119 (120)
|||+.+|.||+++|.+ +|+|++++++||.+|+++|.+|++
T Consensus 87 Pnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~ 128 (161)
T 2grr_A 87 PNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNI 128 (161)
T ss_dssp TTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHHSCCT
T ss_pred CCCCCCCeEeehhcCCCCCcCCCCcHHHHHHHHHHHHhCCCC
Confidence 9999999999999975 899999999999999999999986
No 32
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=3.6e-43 Score=232.60 Aligned_cols=118 Identities=25% Similarity=0.405 Sum_probs=107.1
Q ss_pred CCCCchHHHHHHHHHHHhhC-CCCCeEEEecC-C--CCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEecc
Q 033385 1 MANSNLPRRIIKETQRLLSE-PAPGISASPSE-D--NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTK 76 (120)
Q Consensus 1 ma~~~~~~RL~~E~~~l~~~-~~~~~~~~~~~-~--~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~ 76 (120)
|+..++.|||++|+++++++ ++.|+++.+.+ + |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 2 m~~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 81 (138)
T 1jat_B 2 MSKVPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISK 81 (138)
T ss_dssp -CCCCHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred cchHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcc
Confidence 88889999999999999998 78899998843 3 59999999999999999999999999999999999999999999
Q ss_pred CccccccCC-CcE--ecccCCCCCCccCcHHHHHHHHHHhhcCCCC
Q 033385 77 IYHPNIDKL-GRI--CLDILKDKWSPALQIRTVLLRGEYFLFSRGR 119 (120)
Q Consensus 77 i~hPnv~~~-G~v--cl~~l~~~W~p~~~v~~vl~~i~~~l~~~~~ 119 (120)
+|||||+.+ |.| |++++. +|+|++++++||.+|+++|.+||+
T Consensus 82 i~HPnv~~~~G~i~~cL~~l~-~W~p~~~i~~vl~~i~~ll~~pn~ 126 (138)
T 1jat_B 82 INLPCVNPTTGEVQTDFHTLR-DWKRAYTMETLLLDLRKEMATPAN 126 (138)
T ss_dssp CCCTTBCTTTCBBCTTSHHHH-TCCTTCCHHHHHHHHHHHHTSHHH
T ss_pred cccCCEeCCCCEEeeecccCC-CCCCcCcHHHHHHHHHHHHcCCCC
Confidence 999999986 999 899886 899999999999999999999764
No 33
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=3e-42 Score=232.16 Aligned_cols=118 Identities=26% Similarity=0.462 Sum_probs=109.2
Q ss_pred CCCchHHHHHHHHHHHhhC-CCCCeEEEecC-C--CCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccC
Q 033385 2 ANSNLPRRIIKETQRLLSE-PAPGISASPSE-D--NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKI 77 (120)
Q Consensus 2 a~~~~~~RL~~E~~~l~~~-~~~~~~~~~~~-~--~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i 77 (120)
+...+.+||++|+++++++ +++|+++.+.+ + |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++
T Consensus 18 ~~~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i 97 (156)
T 2q0v_A 18 GIVPRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKI 97 (156)
T ss_dssp SCCCHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCC
T ss_pred ccchHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEccc
Confidence 3467889999999999998 78899998843 3 599999999999999999999999999999999999999999999
Q ss_pred ccccccCCCcE---ecccCCCCCCccCcHHHHHHHHHHhhcCCCCC
Q 033385 78 YHPNIDKLGRI---CLDILKDKWSPALQIRTVLLRGEYFLFSRGRT 120 (120)
Q Consensus 78 ~hPnv~~~G~v---cl~~l~~~W~p~~~v~~vl~~i~~~l~~~~~~ 120 (120)
|||||+.+|+| |+++|. +|+|++++++||.+|+++|.+|++.
T Consensus 98 ~HPNV~~~G~icisCL~iL~-~WsP~~ti~~vL~sI~~ll~~Pn~~ 142 (156)
T 2q0v_A 98 EMSCVDNCGRVIKNNLHILK-NWNRNYTIETILISLRQEMLSSANK 142 (156)
T ss_dssp CCTTBCTTSBBCGGGSHHHH-TCCTTCCHHHHHHHHHHHTTSTTTT
T ss_pred ccCCCccCCeEehhhccccc-CCCCcCcHHHHHHHHHHHHhCCCCC
Confidence 99999999999 888886 5999999999999999999999863
No 34
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=3.6e-42 Score=232.38 Aligned_cols=116 Identities=23% Similarity=0.410 Sum_probs=106.9
Q ss_pred CchHHHHHHHHHHHhhCCCCC-eEEEe-cCCC--CcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCcc
Q 033385 4 SNLPRRIIKETQRLLSEPAPG-ISASP-SEDN--MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYH 79 (120)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~~-~~~~~-~~~~--~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~h 79 (120)
.++.|||++|++++++++++| +.+.+ +++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 24 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~H 103 (160)
T 2a4d_A 24 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINM 103 (160)
T ss_dssp HHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCC
T ss_pred chHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCcee
Confidence 457789999999999998888 77776 4554 8999999999999999999999999999999999999999999999
Q ss_pred cccc-CCCcEecccCC--CCCCccCcHHHHHHHHHHhhc-CCCC
Q 033385 80 PNID-KLGRICLDILK--DKWSPALQIRTVLLRGEYFLF-SRGR 119 (120)
Q Consensus 80 Pnv~-~~G~vcl~~l~--~~W~p~~~v~~vl~~i~~~l~-~~~~ 119 (120)
|||+ .+|+||+++|. ++|+|++++++||.+|+++|. +||+
T Consensus 104 PNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~ 147 (160)
T 2a4d_A 104 NGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENM 147 (160)
T ss_dssp TTBCTTTCBBCGGGSHHHHTCCTTCCHHHHHHHHHHHHTSTTTT
T ss_pred CCEECCCCEEehhhcCCccCCCccCcHHHHHHHHHHHHccCCCC
Confidence 9999 69999999997 899999999999999999995 5665
No 35
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.3e-42 Score=232.95 Aligned_cols=113 Identities=31% Similarity=0.618 Sum_probs=107.8
Q ss_pred CchHHHHHHHHHHHhhCCCCCeEEE-ecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCccccc
Q 033385 4 SNLPRRIIKETQRLLSEPAPGISAS-PSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 82 (120)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~~~~~~-~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hPnv 82 (120)
..+.+||++|++++ ++++|+++. ++++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 5 ~~~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 81 (160)
T 1y8x_A 5 SAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNI 81 (160)
T ss_dssp CHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred cHHHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcC
Confidence 35789999999999 567899998 7889999999998 9999999999999999999999999999999999999999
Q ss_pred cCCCcEecccCCCCCCccCcHHHHHHHHHHhhcCCCC
Q 033385 83 DKLGRICLDILKDKWSPALQIRTVLLRGEYFLFSRGR 119 (120)
Q Consensus 83 ~~~G~vcl~~l~~~W~p~~~v~~vl~~i~~~l~~~~~ 119 (120)
+.+|.||+++|.++|+|++++++||.+|+++|.+|++
T Consensus 82 ~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~Pn~ 118 (160)
T 1y8x_A 82 DLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNP 118 (160)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCC
T ss_pred CCCCeEEcccchhhccCCCCHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999986
No 36
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=4.3e-43 Score=246.71 Aligned_cols=116 Identities=38% Similarity=0.749 Sum_probs=110.5
Q ss_pred chHHHHHHHHHHHhhCCCCCeEEEecCC-CCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCcccccc
Q 033385 5 NLPRRIIKETQRLLSEPAPGISASPSED-NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID 83 (120)
Q Consensus 5 ~~~~RL~~E~~~l~~~~~~~~~~~~~~~-~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hPnv~ 83 (120)
.+.|||++|++++++++++|+++.+.++ ++++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~ 81 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 81 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCc
Confidence 4679999999999999999999999766 566999999999999999999999999999999999999999999999999
Q ss_pred C-CCcEecccCCCCCCccCcHHHHHHHHHHhhcCCCCC
Q 033385 84 K-LGRICLDILKDKWSPALQIRTVLLRGEYFLFSRGRT 120 (120)
Q Consensus 84 ~-~G~vcl~~l~~~W~p~~~v~~vl~~i~~~l~~~~~~ 120 (120)
. +|.||+++|.++|+|++++++||.+|+++|.+|+|.
T Consensus 82 ~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~ 119 (215)
T 1tte_A 82 SVTGAICLDILRNAWSPVITLKSALISLQALLQSPEPN 119 (215)
T ss_dssp SSSSCCCSSTTTCCSCTTCCHHHHHHHHHHHHTSCCCS
T ss_pred CCCCEEECccCCCCCCCcCcHHHHHHHHHHHHhCCCCC
Confidence 9 999999999999999999999999999999999873
No 37
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=5.5e-42 Score=245.90 Aligned_cols=116 Identities=42% Similarity=0.757 Sum_probs=111.0
Q ss_pred chHHHHHHHHHHHhhC---CCCCeEEEecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCcccc
Q 033385 5 NLPRRIIKETQRLLSE---PAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPN 81 (120)
Q Consensus 5 ~~~~RL~~E~~~l~~~---~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hPn 81 (120)
.+.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 57 ~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPN 136 (253)
T 3e46_A 57 IAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPN 136 (253)
T ss_dssp HHHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCccCC
Confidence 4679999999999987 4689999999999999999999999999999999999999999999999999999999999
Q ss_pred ccC-CCcEecccCCCCCCccCcHHHHHHHHHHhhcCCCCC
Q 033385 82 IDK-LGRICLDILKDKWSPALQIRTVLLRGEYFLFSRGRT 120 (120)
Q Consensus 82 v~~-~G~vcl~~l~~~W~p~~~v~~vl~~i~~~l~~~~~~ 120 (120)
|+. +|.||+++|.++|+|+++|++||.+|+++|.+|||.
T Consensus 137 V~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~ 176 (253)
T 3e46_A 137 ISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPD 176 (253)
T ss_dssp BCTTTCBBCCGGGTTCCCTTCCHHHHHHHHHHHHHSCCTT
T ss_pred ccCCCCeeecccccCCCCCCCCHHHHHHHHHHHhcCCCCC
Confidence 995 999999999999999999999999999999999973
No 38
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5.6e-42 Score=235.60 Aligned_cols=113 Identities=30% Similarity=0.586 Sum_probs=108.0
Q ss_pred CchHHHHHHHHHHHhhCCCCCeEEE-ecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCccccc
Q 033385 4 SNLPRRIIKETQRLLSEPAPGISAS-PSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 82 (120)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~~~~~~-~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hPnv 82 (120)
..+.+||++|++++ ++++|+++. ++++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 25 ~~~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNV 101 (180)
T 2nvu_C 25 SAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNI 101 (180)
T ss_dssp CHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred cHHHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCCC
Confidence 45789999999999 577899998 7889999999998 9999999999999999999999999999999999999999
Q ss_pred cCCCcEecccCCCCCCccCcHHHHHHHHHHhhcCCCC
Q 033385 83 DKLGRICLDILKDKWSPALQIRTVLLRGEYFLFSRGR 119 (120)
Q Consensus 83 ~~~G~vcl~~l~~~W~p~~~v~~vl~~i~~~l~~~~~ 119 (120)
+.+|.||+++|.++|+|++++++||.+|+++|.+|++
T Consensus 102 ~~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~Pn~ 138 (180)
T 2nvu_C 102 DLEGNVALNILREDWKPVLTINSIIYGLQYLFLEPNP 138 (180)
T ss_dssp CTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCT
T ss_pred CCCCcEEcccccccCCCCCCHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999986
No 39
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=1.6e-41 Score=232.02 Aligned_cols=116 Identities=30% Similarity=0.564 Sum_probs=107.1
Q ss_pred chHHHHHHHHHHHhh-C-C------CC---CeEEEe-cCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEE
Q 033385 5 NLPRRIIKETQRLLS-E-P------AP---GISASP-SEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVR 72 (120)
Q Consensus 5 ~~~~RL~~E~~~l~~-~-~------~~---~~~~~~-~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~ 72 (120)
.+.+||++|++++++ + + +. ++.+.+ +++|+++|+++|.||++|||+||.|+++|.||++||++||+|+
T Consensus 6 ~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~ 85 (172)
T 2y9m_A 6 TCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKIS 85 (172)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEE
T ss_pred HHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCEEE
Confidence 477999999999998 5 3 32 466777 7889999999999999999999999999999999999999999
Q ss_pred Eec-cCcccccc-CCCcEecccCC-CCCCccCcHHHHHHHHHHhhcCCCCC
Q 033385 73 FLT-KIYHPNID-KLGRICLDILK-DKWSPALQIRTVLLRGEYFLFSRGRT 120 (120)
Q Consensus 73 f~t-~i~hPnv~-~~G~vcl~~l~-~~W~p~~~v~~vl~~i~~~l~~~~~~ 120 (120)
|.| ++|||||+ .+|.||+++|. ++|+|++++++||.+|+++|.+|++.
T Consensus 86 f~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~si~~ll~~p~~~ 136 (172)
T 2y9m_A 86 FMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLREPVCD 136 (172)
T ss_dssp ECTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHHHHHHHHSCCTT
T ss_pred EeeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHHHHHHHhCCCCC
Confidence 999 99999995 79999999998 99999999999999999999999873
No 40
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=1.4e-41 Score=231.28 Aligned_cols=115 Identities=29% Similarity=0.566 Sum_probs=108.3
Q ss_pred CchHHHHHHHHHHHhhCCCCCeEEEe-cCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCccccc
Q 033385 4 SNLPRRIIKETQRLLSEPAPGISASP-SEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 82 (120)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~~~~~~~-~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hPnv 82 (120)
..+.|||++|++++++++++|+++.+ +++|++.|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 13 s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 91 (167)
T 3fn1_B 13 SVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNI 91 (167)
T ss_dssp CHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCC
Confidence 45789999999999999999999985 568899999998 8999999999999999999999999999999999999999
Q ss_pred cCCCcEecccCCC------CCCccCcHHHHHHHHHHhhcC-CCC
Q 033385 83 DKLGRICLDILKD------KWSPALQIRTVLLRGEYFLFS-RGR 119 (120)
Q Consensus 83 ~~~G~vcl~~l~~------~W~p~~~v~~vl~~i~~~l~~-~~~ 119 (120)
+.+|.||+++|.+ +|+|++++++||.+|+++|.+ ||+
T Consensus 92 ~~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~ 135 (167)
T 3fn1_B 92 TETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNF 135 (167)
T ss_dssp CTTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCS
T ss_pred CCCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCC
Confidence 9999999999975 799999999999999999999 575
No 41
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=1.3e-41 Score=231.86 Aligned_cols=116 Identities=24% Similarity=0.416 Sum_probs=106.9
Q ss_pred CchHHHHHHHHHHHhhCCCCC-eEEEe-cCCC--CcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCcc
Q 033385 4 SNLPRRIIKETQRLLSEPAPG-ISASP-SEDN--MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYH 79 (120)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~~-~~~~~-~~~~--~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~h 79 (120)
.++.+||++|++++++++++| +.+.+ +++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 34 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~H 113 (170)
T 2hlw_A 34 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINM 113 (170)
T ss_dssp CCHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEeccccc
Confidence 457899999999999998888 67776 4554 9999999999999999999999999999999999999999999999
Q ss_pred cccc-CCCcEecccCC--CCCCccCcHHHHHHHHHHhhcC-CCC
Q 033385 80 PNID-KLGRICLDILK--DKWSPALQIRTVLLRGEYFLFS-RGR 119 (120)
Q Consensus 80 Pnv~-~~G~vcl~~l~--~~W~p~~~v~~vl~~i~~~l~~-~~~ 119 (120)
|||+ .+|.||+++|. ++|+|++++++||.+|+++|.+ ||+
T Consensus 114 PNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~ 157 (170)
T 2hlw_A 114 NGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENM 157 (170)
T ss_dssp SSBCSSSCBBCTTTCHHHHTCCSSCCHHHHHHHHHHHHHSTTTS
T ss_pred CCEeCCCCEEEhhhcCCCCCCCccCcHHHHHHHHHHHHccCCCC
Confidence 9999 69999999997 8999999999999999999975 665
No 42
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=9.1e-42 Score=229.58 Aligned_cols=113 Identities=32% Similarity=0.654 Sum_probs=106.9
Q ss_pred hHHHHHHHHHHHhhCCCCCeEEE-ecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCccccccC
Q 033385 6 LPRRIIKETQRLLSEPAPGISAS-PSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK 84 (120)
Q Consensus 6 ~~~RL~~E~~~l~~~~~~~~~~~-~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hPnv~~ 84 (120)
+.+||++|++++++++++|+.+. +.++|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 3 a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 81 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDE 81 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCC
Confidence 45899999999999999999865 47889999999998 99999999999999999999999999999999999999999
Q ss_pred CCcEecccCC-CCCCccCcHHHHHHHHHHhhcCCCC
Q 033385 85 LGRICLDILK-DKWSPALQIRTVLLRGEYFLFSRGR 119 (120)
Q Consensus 85 ~G~vcl~~l~-~~W~p~~~v~~vl~~i~~~l~~~~~ 119 (120)
+|.||+++|. ++|+|++++++||.+|+++|.+|++
T Consensus 82 ~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~ 117 (154)
T 1c4z_D 82 KGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQP 117 (154)
T ss_dssp TCBBCCTTTSSSSCCTTCCHHHHHHHHHHHHHSCCC
T ss_pred CCEEECCCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Confidence 9999999996 8999999999999999999999986
No 43
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=3.3e-42 Score=231.25 Aligned_cols=112 Identities=29% Similarity=0.648 Sum_probs=105.4
Q ss_pred chHHHHHHHHHHHhhCCCCCeEEEecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCccccccC
Q 033385 5 NLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK 84 (120)
Q Consensus 5 ~~~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hPnv~~ 84 (120)
++.|||++|++++++. |+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 2 sa~~Rl~kEl~~l~~~---~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~ 78 (152)
T 2onu_A 2 TSLTRKQCDFTKLIMA---GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDE 78 (152)
T ss_dssp -CCCHHHHTHHHHHHH---TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCT
T ss_pred hHHHHHHHHHHhcCcC---CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcC
Confidence 4568999999999874 7888998999999999999999999999999999999999999999999999999999995
Q ss_pred -CCcEecccCCCCCCccCcHHHHHHH-HHHhhcCCCC
Q 033385 85 -LGRICLDILKDKWSPALQIRTVLLR-GEYFLFSRGR 119 (120)
Q Consensus 85 -~G~vcl~~l~~~W~p~~~v~~vl~~-i~~~l~~~~~ 119 (120)
+|.||+++|.++|+|++++++||.+ |+++|.+|++
T Consensus 79 ~~G~iCl~il~~~W~p~~~i~~vl~~ii~~Ll~~Pn~ 115 (152)
T 2onu_A 79 ASGSVCLDVINQTWTPLYSLVNVFEVFLPQLLTYPNP 115 (152)
T ss_dssp TTCBBCHHHHHHHCCTTCCHHHHHHTHHHHHHHSCCC
T ss_pred cCCeEecccccccCCCCCCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999 6899999986
No 44
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=6.6e-42 Score=234.79 Aligned_cols=116 Identities=29% Similarity=0.636 Sum_probs=106.1
Q ss_pred CCCC-chHHHHHHHHHHHhhCCCCCeEEEecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCcc
Q 033385 1 MANS-NLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYH 79 (120)
Q Consensus 1 ma~~-~~~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~h 79 (120)
|++. .+.|||++|++++++ +|+++.+. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 20 ms~~~~a~~RL~kEl~~l~~---~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~H 95 (179)
T 2z5d_A 20 MSSPSPGKRRMDTDVIKLIE---SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFH 95 (179)
T ss_dssp ---CCHHHHHHHHHHHHHHH---SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCB
T ss_pred CCCchHHHHHHHHHHHhcCc---CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCcc
Confidence 4543 478999999999985 57888887 678999999999999999999999999999999999999999999999
Q ss_pred ccccC-CCcEecccCCCCCCccCcHHHHHHH-HHHhhcCCCCC
Q 033385 80 PNIDK-LGRICLDILKDKWSPALQIRTVLLR-GEYFLFSRGRT 120 (120)
Q Consensus 80 Pnv~~-~G~vcl~~l~~~W~p~~~v~~vl~~-i~~~l~~~~~~ 120 (120)
|||+. +|.||+++|.++|+|++++++||.+ |+++|.+||+.
T Consensus 96 PNV~~~~G~ICL~iL~~~WsP~~ti~~iL~s~I~~Ll~~Pn~~ 138 (179)
T 2z5d_A 96 PNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPI 138 (179)
T ss_dssp TTBCTTTCBBCHHHHHHHCCTTCCTTHHHHTHHHHHHHSCCCS
T ss_pred CcCCCCCCeEeccccccCCCCCCCHHHHHHHHHHHHHhCCCCC
Confidence 99998 9999999999999999999999999 99999999873
No 45
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-40 Score=230.29 Aligned_cols=116 Identities=29% Similarity=0.618 Sum_probs=103.8
Q ss_pred CCchHHHHHHHHHHHhhCCCCCeEEEecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCccccc
Q 033385 3 NSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 82 (120)
Q Consensus 3 ~~~~~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hPnv 82 (120)
+..+.+||++|+++|++++++|+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+ ||||
T Consensus 12 ~~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~ 89 (187)
T 2f4w_A 12 PTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRF 89 (187)
T ss_dssp --CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSB
T ss_pred ccHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--Ccee
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred cCCCcEecccC---CCCCCccCcHHHHHHHHHHhhcCCCCC
Q 033385 83 DKLGRICLDIL---KDKWSPALQIRTVLLRGEYFLFSRGRT 120 (120)
Q Consensus 83 ~~~G~vcl~~l---~~~W~p~~~v~~vl~~i~~~l~~~~~~ 120 (120)
+.+|+||+++| .++|+|++++++||.+|+++|.+|+|.
T Consensus 90 ~~~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll~~p~p~ 130 (187)
T 2f4w_A 90 KCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPT 130 (187)
T ss_dssp CTTSCBC----------CCTTCCHHHHHHHHHHHHHSCCCC
T ss_pred ccCCeEeeeccccCccCCCCcCcHHHHHHHHHHHhcCCCCC
Confidence 99999999999 689999999999999999999999973
No 46
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=2e-40 Score=229.52 Aligned_cols=114 Identities=30% Similarity=0.613 Sum_probs=108.3
Q ss_pred CchHHHHHHHHHHHhhCCCCCeEEE----ecCCCCc---EEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEecc
Q 033385 4 SNLPRRIIKETQRLLSEPAPGISAS----PSEDNMR---YFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTK 76 (120)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~~~~~~----~~~~~~~---~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~ 76 (120)
..+.+||++|+++++ +++|+++. ++++|++ +|+++|. |++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 28 s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 104 (190)
T 3o2u_A 28 SAARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKK 104 (190)
T ss_dssp CHHHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECSC
T ss_pred cHHHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEecC
Confidence 567899999999998 67899998 8899999 9999997 788999999999999999999999999999999
Q ss_pred CccccccCCCcEecccCCCCCCccCcHHHHHHHHHHhhcCCCCC
Q 033385 77 IYHPNIDKLGRICLDILKDKWSPALQIRTVLLRGEYFLFSRGRT 120 (120)
Q Consensus 77 i~hPnv~~~G~vcl~~l~~~W~p~~~v~~vl~~i~~~l~~~~~~ 120 (120)
+|||||+.+|.||+++|.++|+|++++++||.+|+++|.+||+.
T Consensus 105 i~HPnV~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~ 148 (190)
T 3o2u_A 105 IFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPN 148 (190)
T ss_dssp CCCTTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTT
T ss_pred cccCCCCCCCeEechhccCCCCCCCCHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999999999999999999999873
No 47
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=2.3e-40 Score=251.02 Aligned_cols=116 Identities=45% Similarity=0.771 Sum_probs=113.0
Q ss_pred chHHHHHHHHHHHhhCCCCCeEEEecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCccccccC
Q 033385 5 NLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK 84 (120)
Q Consensus 5 ~~~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hPnv~~ 84 (120)
.+.|||++|++++++++++|+++.|.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 3 ~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 82 (399)
T 4ddg_A 3 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 82 (399)
T ss_dssp HHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccCC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEecccCCCCCCccCcHHHHHHHHHHhhcCCCCC
Q 033385 85 LGRICLDILKDKWSPALQIRTVLLRGEYFLFSRGRT 120 (120)
Q Consensus 85 ~G~vcl~~l~~~W~p~~~v~~vl~~i~~~l~~~~~~ 120 (120)
+|.||+++|.++|+|++++++||.+|+++|.+|||.
T Consensus 83 ~G~iCl~il~~~W~p~~~i~~vL~~i~~ll~~pnp~ 118 (399)
T 4ddg_A 83 NGSISLDILRSQWSPALTISKVLLSICSLLCDPNPD 118 (399)
T ss_dssp TCBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTT
T ss_pred CCeEeCcccccCCCccccHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999974
No 48
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=5.4e-41 Score=229.07 Aligned_cols=111 Identities=30% Similarity=0.593 Sum_probs=102.9
Q ss_pred chHHHHHHHHHHHhhCCCCCeEEEecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCccccccC
Q 033385 5 NLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK 84 (120)
Q Consensus 5 ~~~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hPnv~~ 84 (120)
++.+||++|++++++++. ++ +.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 12 ~~~~RL~~El~~l~~~~~-~v---~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~ 87 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTR-KV---YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDE 87 (171)
T ss_dssp -CCHHHHHHHHHHHSSSS-CE---EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCT
T ss_pred cHHHHHHHHHHHHHhCCC-CC---CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCcc
Confidence 567999999999998874 44 35789999999999999999999999999999999999999999999999999995
Q ss_pred -CCcEecccCCCCCCccCcHHHHHHHH-HHhhcCCCC
Q 033385 85 -LGRICLDILKDKWSPALQIRTVLLRG-EYFLFSRGR 119 (120)
Q Consensus 85 -~G~vcl~~l~~~W~p~~~v~~vl~~i-~~~l~~~~~ 119 (120)
+|.||+++|.++|+|++++++||.+| +++|.+|++
T Consensus 88 ~~G~iCl~iL~~~W~p~~~i~~vL~sil~~ll~~Pn~ 124 (171)
T 1yf9_A 88 RSGSVCLDVINQTWTPMYQLENIFDVFLPQLLRYPNP 124 (171)
T ss_dssp TTCBBCHHHHHHHCCTTCCTHHHHHTHHHHHHHSCCS
T ss_pred cCCeEeccccccCCCCCCcHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999997 799999886
No 49
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=1.6e-40 Score=226.18 Aligned_cols=115 Identities=28% Similarity=0.514 Sum_probs=106.3
Q ss_pred CCCCchHHHHHHHHHHHhhCC------------CCCeEEEecCCCCcEEEEEEeCCCCCCCC--CCeEEEEEeCCCCCCC
Q 033385 1 MANSNLPRRIIKETQRLLSEP------------APGISASPSEDNMRYFNVMILGPTQSPYE--GGVFKLELFLPEEYPM 66 (120)
Q Consensus 1 ma~~~~~~RL~~E~~~l~~~~------------~~~~~~~~~~~~~~~w~~~i~gp~~t~y~--g~~f~~~i~fp~~YP~ 66 (120)
||+ .+.|||++|++++++++ ..++.+.+.++|+++|+++|.||++|||+ ||.|+++|.||++||+
T Consensus 5 Ms~-~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~ 83 (167)
T 4ds2_A 5 MKN-ISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPH 83 (167)
T ss_dssp CCC-CCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTT
T ss_pred ccH-HHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCC
Confidence 665 45699999999999977 67999999999999999999999999999 9999999999999999
Q ss_pred CCCeEEEeccCccccccCCCcEecccCCCCCCccCcHHHHHH-HHHHhhcC
Q 033385 67 AAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLL-RGEYFLFS 116 (120)
Q Consensus 67 ~pP~v~f~t~i~hPnv~~~G~vcl~~l~~~W~p~~~v~~vl~-~i~~~l~~ 116 (120)
+||+|+|.|++|||||+.+|.||+++|.++|+|+++++++|+ .|++++.+
T Consensus 84 ~pP~v~f~t~i~HPnv~~~G~iCl~il~~~W~p~~~i~~vll~~l~~l~~~ 134 (167)
T 4ds2_A 84 EPPTVRFVTPVYSPLVTGEGGICDRMVNDFWTPDQHASDVIKLVLDRVFSQ 134 (167)
T ss_dssp SCCEEEESSCCCCSSCCTTSCCCTHHHHTTCCTTSCHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeCCcccccCCCCCEEEcccCcCCCCCCCChHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999765 56677764
No 50
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=5.6e-41 Score=231.63 Aligned_cols=117 Identities=19% Similarity=0.345 Sum_probs=110.2
Q ss_pred CCchHHHHHHHHHHHhhCC---CCCeEEEecCCCCcEEEEEEeCC-CCCCCCC-----------CeEEEEEeCCCCCCCC
Q 033385 3 NSNLPRRIIKETQRLLSEP---APGISASPSEDNMRYFNVMILGP-TQSPYEG-----------GVFKLELFLPEEYPMA 67 (120)
Q Consensus 3 ~~~~~~RL~~E~~~l~~~~---~~~~~~~~~~~~~~~w~~~i~gp-~~t~y~g-----------~~f~~~i~fp~~YP~~ 67 (120)
+..+.+||++|+++|++++ +.++++.+.++|+++|+++|.|| ++|||+| |.|+++|.||++||++
T Consensus 25 s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~~ 104 (186)
T 1zuo_A 25 SVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFD 104 (186)
T ss_dssp CHHHHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTSS
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCCC
Confidence 3457899999999999988 68899999999999999999997 9999998 8999999999999999
Q ss_pred CCeEEEeccCccc-cccCCCcEecccCC-CCCCccCcHHHHHHHHHHhhcCCCC
Q 033385 68 APKVRFLTKIYHP-NIDKLGRICLDILK-DKWSPALQIRTVLLRGEYFLFSRGR 119 (120)
Q Consensus 68 pP~v~f~t~i~hP-nv~~~G~vcl~~l~-~~W~p~~~v~~vl~~i~~~l~~~~~ 119 (120)
||+|+|.+++||| ||+.+|.||+++|. ++|+|+++|++||++|+++|.+|++
T Consensus 105 PP~V~f~tpi~hPnnV~~~G~ICL~iL~~~~WsP~~ti~~VL~sI~slL~~p~a 158 (186)
T 1zuo_A 105 PPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKA 158 (186)
T ss_dssp CCEEEEEESCEESTTBCGGGBBCCGGGSTTTCCTTSCHHHHHHHHHHHHHHTTC
T ss_pred CCeEEEeCCccCCCccCCCCcEEeccCCCCCCCCcCcHHHHHHHHHHHHcCCCh
Confidence 9999999999999 69999999999996 8999999999999999999999875
No 51
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=7.9e-39 Score=235.53 Aligned_cols=117 Identities=26% Similarity=0.617 Sum_probs=107.9
Q ss_pred CCchHHHHHHHHHHHhhCCCC----CeEEEecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEecc--
Q 033385 3 NSNLPRRIIKETQRLLSEPAP----GISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTK-- 76 (120)
Q Consensus 3 ~~~~~~RL~~E~~~l~~~~~~----~~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~-- 76 (120)
+..+.|||++|+++|++++++ ++.+.+.++|++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+
T Consensus 74 s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g 153 (323)
T 3ceg_A 74 SAARARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGG 153 (323)
T ss_dssp CHHHHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTT
T ss_pred CHHHHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCC
Confidence 346889999999999998776 45677889999999999999999999999999999999999999999999998
Q ss_pred ---CccccccCCCcEecccCC-------CCCCccC-cHHHHHHHHHHhhcCCCC
Q 033385 77 ---IYHPNIDKLGRICLDILK-------DKWSPAL-QIRTVLLRGEYFLFSRGR 119 (120)
Q Consensus 77 ---i~hPnv~~~G~vcl~~l~-------~~W~p~~-~v~~vl~~i~~~l~~~~~ 119 (120)
+|||||+.+|.||+++|. ++|+|++ +|++||++|+++|.+++|
T Consensus 154 ~~~ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~~P 207 (323)
T 3ceg_A 154 HSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEP 207 (323)
T ss_dssp TTCCCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCSSG
T ss_pred CcccccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCCCC
Confidence 999999999999999997 6999999 899999999999975554
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.96 E-value=2.9e-31 Score=177.73 Aligned_cols=97 Identities=19% Similarity=0.294 Sum_probs=89.4
Q ss_pred hHHHHHHHHHHHhhCCCCCeEEEecCCCCcEEEEEEeCCCCCCCCCC----------eEEEEEeCCCCCCCCCCeEEEec
Q 033385 6 LPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGG----------VFKLELFLPEEYPMAAPKVRFLT 75 (120)
Q Consensus 6 ~~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~g~----------~f~~~i~fp~~YP~~pP~v~f~t 75 (120)
..+||++|++.|++ ++.+..+|++.|.+.+.||++|+|+|| .|++++.||++||.+||+|+|.+
T Consensus 33 w~~RL~eE~k~L~k------~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~ 106 (172)
T 2z6o_A 33 WVQRLKEEYQSLIR------YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPE 106 (172)
T ss_dssp HHHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGG
T ss_pred HHHHHHHHHHHHHH------HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCC
Confidence 37899999999998 467778899999999999999999999 99999999999999999999999
Q ss_pred c-CccccccCCCcEecccC-CC---CCCccCcHHHHHH
Q 033385 76 K-IYHPNIDKLGRICLDIL-KD---KWSPALQIRTVLL 108 (120)
Q Consensus 76 ~-i~hPnv~~~G~vcl~~l-~~---~W~p~~~v~~vl~ 108 (120)
. +||||||.+|+|||+++ .. .|+|.+++.++|.
T Consensus 107 ~~~~hpnmY~~G~ICLdIL~kp~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 107 LDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMA 144 (172)
T ss_dssp GTTTCSSBCTTSBBCCCTTHHHHHHHHTTSCCHHHHHH
T ss_pred CCCCCCCCCCCCcEechhhccccccccCCccCHHHHHh
Confidence 8 99999999999999999 43 4569999999973
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.87 E-value=1.1e-21 Score=132.15 Aligned_cols=112 Identities=21% Similarity=0.377 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHhhC-CC--CCeEEEecCCCCcEEEEEEeCCCCCCCCCCe---EEEEEeCCCCCCCCCCeEEEecc----
Q 033385 7 PRRIIKETQRLLSE-PA--PGISASPSEDNMRYFNVMILGPTQSPYEGGV---FKLELFLPEEYPMAAPKVRFLTK---- 76 (120)
Q Consensus 7 ~~RL~~E~~~l~~~-~~--~~~~~~~~~~~~~~w~~~i~gp~~t~y~g~~---f~~~i~fp~~YP~~pP~v~f~t~---- 76 (120)
.+|..+|...+.+. +. +...+...++...++-+.+.|.-.++|+|+. |.+.|.||.+||++||.|.|.++
T Consensus 30 ~~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m 109 (162)
T 3r3q_A 30 GRTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDM 109 (162)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCT
T ss_pred hhHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCccc
Confidence 35777888777653 22 2333445666666777777776668999998 88999999999999999988651
Q ss_pred ------Cc-cccccCCCcEecccCCCCCCc-cCcHHHHHHHHHHhhcCCCC
Q 033385 77 ------IY-HPNIDKLGRICLDILKDKWSP-ALQIRTVLLRGEYFLFSRGR 119 (120)
Q Consensus 77 ------i~-hPnv~~~G~vcl~~l~~~W~p-~~~v~~vl~~i~~~l~~~~~ 119 (120)
++ ||||+.+|+||+++|. +|+| +.++.++|.+|+++|.+|+|
T Consensus 110 ~~~~~~I~~hpnVD~~G~I~lpyL~-~W~p~~s~L~~ll~~l~~lf~ep~~ 159 (162)
T 3r3q_A 110 NTISSSLPIQEYIDSNGWIALPILH-AWDPAAMNLIMVVQELMSLLHEPPQ 159 (162)
T ss_dssp TTSCTTSTHHHHBCTTSBBCCGGGG-SCCGGGCCHHHHHHHHHHTTSCCCC
T ss_pred cccccccCCCCCCCCCCcEeCcccc-cCCCCcCcHHHHHHHHHHHhcCCCC
Confidence 67 9999999999999995 6999 67999999999999999997
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.82 E-value=3.7e-22 Score=131.13 Aligned_cols=87 Identities=17% Similarity=0.324 Sum_probs=76.2
Q ss_pred hHHHHHHHHHHHhhCCCCCeEEEecCCCCcEEEEEEeCCCCCCCCCC----------eEEEEEeCCCCCCCCCCeEEEec
Q 033385 6 LPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGG----------VFKLELFLPEEYPMAAPKVRFLT 75 (120)
Q Consensus 6 ~~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~g~----------~f~~~i~fp~~YP~~pP~v~f~t 75 (120)
...||.+||..|-+ +++...++-..|...+.|+++|+|.|+ .|.+++.||.+||.+||.|+|.+
T Consensus 35 w~~RlkeEy~alI~------yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~ 108 (168)
T 3kpa_A 35 WTARLKEEYASLIT------YVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPE 108 (168)
T ss_dssp HHHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGG
T ss_pred HHHHHHHHHHHHHH------HHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeeccc
Confidence 56799999999976 345455566689999999999999999 89999999999999999999999
Q ss_pred c-CccccccCCCcEecccCCCCCCccC
Q 033385 76 K-IYHPNIDKLGRICLDILKDKWSPAL 101 (120)
Q Consensus 76 ~-i~hPnv~~~G~vcl~~l~~~W~p~~ 101 (120)
. .+|||+|.+|+|||+++ |+|.+
T Consensus 109 ldgkt~kmYr~GkICLdIh---wkPlW 132 (168)
T 3kpa_A 109 LEGKTVKMYRGGKICMTTH---FFPLW 132 (168)
T ss_dssp GTTTCSSEETTTEECCCTT---HHHHH
T ss_pred ccCcCccccCCCcEEeccc---cchhh
Confidence 5 89999999999999987 66543
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.65 E-value=3.2e-16 Score=103.82 Aligned_cols=81 Identities=20% Similarity=0.389 Sum_probs=71.6
Q ss_pred CCCCcEEEEEEeCCCCCCCCCCeEE--EEEeCCCCCCCCCCeEEEecc------CccccccCCCcEecccCCCCCCc-cC
Q 033385 31 EDNMRYFNVMILGPTQSPYEGGVFK--LELFLPEEYPMAAPKVRFLTK------IYHPNIDKLGRICLDILKDKWSP-AL 101 (120)
Q Consensus 31 ~~~~~~w~~~i~gp~~t~y~g~~f~--~~i~fp~~YP~~pP~v~f~t~------i~hPnv~~~G~vcl~~l~~~W~p-~~ 101 (120)
..++..|.++|. .+|+|+.|. +.|.||.+||++||.| |.++ ..||||+.+|++|++.|.+ |++ ..
T Consensus 50 ~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~~G~i~lpyL~~-W~~~~s 123 (146)
T 3obq_A 50 SRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDANGKIYLPYLHE-WKHPQS 123 (146)
T ss_dssp TCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCTTCBBCCHHHHT-CCTTTC
T ss_pred hheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCCCCCEecccccc-cCCCCC
Confidence 468999999997 579999998 5999999999999999 6656 5899999999999999964 988 77
Q ss_pred cHHHHHHHHHHhhcCC
Q 033385 102 QIRTVLLRGEYFLFSR 117 (120)
Q Consensus 102 ~v~~vl~~i~~~l~~~ 117 (120)
++.+++..+++.|.+.
T Consensus 124 nL~~ll~~l~~~F~~e 139 (146)
T 3obq_A 124 DLLGLIQVMIVVFGDE 139 (146)
T ss_dssp CHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHhhC
Confidence 9999999999998754
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.02 E-value=0.0082 Score=37.93 Aligned_cols=68 Identities=18% Similarity=0.180 Sum_probs=43.9
Q ss_pred hHHHHHHHHHHHhhCCCCCeEEEecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEec
Q 033385 6 LPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLT 75 (120)
Q Consensus 6 ~~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t 75 (120)
...+...|+..|+.--+..+.+ .......+.+.+....+..-+.-.+.+.+.||.+||.+||.+.+.+
T Consensus 11 ~~e~q~~EleaL~sIy~d~~~~--~~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 11 YGEEQRNELEALESIYPDSFTV--LSENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEE--CCSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred hHHHHHHHHHHHHHHccCceEE--ccCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 3456788998887533334433 2223356666665322212234578999999999999999998876
No 57
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=96.85 E-value=0.014 Score=39.65 Aligned_cols=83 Identities=16% Similarity=0.215 Sum_probs=61.5
Q ss_pred HHHHHHHHHHhhCCCCCeE-EEecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEeccCccccccCCC
Q 033385 8 RRIIKETQRLLSEPAPGIS-ASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLG 86 (120)
Q Consensus 8 ~RL~~E~~~l~~~~~~~~~-~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hPnv~~~G 86 (120)
.+|.+|+.++ |+. +.-.+.++....+.+... .|..+.++|.++.+||.++|.+...-|. |.
T Consensus 4 ~~li~Ei~~i------GW~~l~~id~~~~~i~l~~~D~-----~gR~H~l~v~l~~~yp~~~P~~~~DlP~--~~----- 65 (186)
T 3zqs_A 4 SSLIEEIGTL------GWDKLVYADTCFSTIKLKAEDA-----SGREHLITLKLKAKYPAESPDYFVDFPV--PF----- 65 (186)
T ss_dssp CSHHHHHHHH------CGGGEEEECTTSSEEEEEEECT-----TSCEEEEEEECCTTTTTSCCEEECCCSS--CC-----
T ss_pred HHHHHHHHHh------CCceeeeecCCccEEEEEEEeC-----CCCeEEEEEEECCCCCCCCCeeEEcCCC--Cc-----
Confidence 3688899888 442 333356788888888732 3788999999999999999987665543 11
Q ss_pred cEecccCCCCCCccCcHHHHHHHHHHhhc
Q 033385 87 RICLDILKDKWSPALQIRTVLLRGEYFLF 115 (120)
Q Consensus 87 ~vcl~~l~~~W~p~~~v~~vl~~i~~~l~ 115 (120)
.-.|+|..++.+++.+.+..|.
T Consensus 66 -------~~~w~~~ssL~~v~~qF~~~Le 87 (186)
T 3zqs_A 66 -------CASWTPQSSLISIYSQFLAAIE 87 (186)
T ss_dssp -------CCCCCTTCCHHHHHHHHHHHHH
T ss_pred -------ccccCCCccHHHHHHHHHHHHH
Confidence 1269999999999888777664
No 58
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=96.77 E-value=0.012 Score=37.17 Aligned_cols=107 Identities=15% Similarity=0.147 Sum_probs=60.4
Q ss_pred HHHHHHHHHHhhCCCCCeEEEecC--CCCcEEEEEEeCCCCCCC--CCCeEEEEEeCCCCCCCCCCeEEEeccCcccccc
Q 033385 8 RRIIKETQRLLSEPAPGISASPSE--DNMRYFNVMILGPTQSPY--EGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID 83 (120)
Q Consensus 8 ~RL~~E~~~l~~~~~~~~~~~~~~--~~~~~w~~~i~gp~~t~y--~g~~f~~~i~fp~~YP~~pP~v~f~t~i~hPnv~ 83 (120)
.+...|+..|+.--...+...-.. .+...+.+.+..+.+..- ..-.+.+.+.+|.+||.++|.|...+.. ++.
T Consensus 11 e~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~~---~L~ 87 (128)
T 2day_A 11 WVLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNPR---GLS 87 (128)
T ss_dssp CHHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEEE---SSC
T ss_pred HHHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcCC---CCC
Confidence 467889988875433444433221 123445555642221111 1247889999999999999999988632 221
Q ss_pred CC--CcEecccCCCCC--CccC-cHHHHHHHHHHhhcCCC
Q 033385 84 KL--GRICLDILKDKW--SPAL-QIRTVLLRGEYFLFSRG 118 (120)
Q Consensus 84 ~~--G~vcl~~l~~~W--~p~~-~v~~vl~~i~~~l~~~~ 118 (120)
.. -.+| +.|.+.| ..+. -+.+++..++..|.+.|
T Consensus 88 ~~~~~~L~-~~L~~~~~e~~G~~mif~lv~~lqe~l~~~n 126 (128)
T 2day_A 88 DEQIHTIL-QVLGHVAKAGLGTAMLYELIEKGKEILSGPS 126 (128)
T ss_dssp HHHHHHHH-HHHHHHHHHTTTSCCHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHH-HHHHHHHHHhCCCEEhHHHHHHHHHHHHhcc
Confidence 10 0111 1222333 2233 47888888888887655
No 59
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=96.76 E-value=0.027 Score=35.98 Aligned_cols=66 Identities=14% Similarity=0.189 Sum_probs=41.7
Q ss_pred HHHHHHHHHhhCCCCCeEEEecC-------CCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEecc
Q 033385 9 RIIKETQRLLSEPAPGISASPSE-------DNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTK 76 (120)
Q Consensus 9 RL~~E~~~l~~~~~~~~~~~~~~-------~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~ 76 (120)
+-..|+..|+.--...+.. ... .....+.+.+....+ .-..-.+.+.+.+|.+||.++|.|.+.+.
T Consensus 14 ~q~~EleaL~SIY~d~~~~-~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~~ 86 (138)
T 2yz0_A 14 IQCNELEAIRSIYMDDFTD-LTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKNV 86 (138)
T ss_dssp HHHHHHHHHHTTSSSSEEC-CSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEECC
T ss_pred HHHHHHHHHHHHChhhhee-cccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEecC
Confidence 5567787776432223322 121 124567777773222 11235788999999999999999998753
No 60
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=95.15 E-value=0.23 Score=31.40 Aligned_cols=68 Identities=16% Similarity=0.189 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHhhCCCCCeEEEecCC-----CCcEEEEEEeCCCC-C-CCCCCeEEEEEeCCCCCCCCCCeEEEec
Q 033385 7 PRRIIKETQRLLSEPAPGISASPSED-----NMRYFNVMILGPTQ-S-PYEGGVFKLELFLPEEYPMAAPKVRFLT 75 (120)
Q Consensus 7 ~~RL~~E~~~l~~~~~~~~~~~~~~~-----~~~~w~~~i~gp~~-t-~y~g~~f~~~i~fp~~YP~~pP~v~f~t 75 (120)
..+...|+..|+.--...+...-... ....+.+.+. +.+ . .-..-.+.+.+.||.+||.++|.|.+.+
T Consensus 12 ~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 12 SQRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp HHHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred HHHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 44677888888753333343321111 1345666665 221 1 0112468999999999999999998854
No 61
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.97 E-value=0.08 Score=33.31 Aligned_cols=67 Identities=18% Similarity=0.164 Sum_probs=40.7
Q ss_pred HHHHHHHHHHhhC-CC-CCeEE-EecCCCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEec
Q 033385 8 RRIIKETQRLLSE-PA-PGISA-SPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLT 75 (120)
Q Consensus 8 ~RL~~E~~~l~~~-~~-~~~~~-~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t 75 (120)
.+...|+..|+.- +. ..+.+ .....+...+.+.+.. .+..-..-.+.+.+.+|.+||..+|.+.+.+
T Consensus 10 e~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~-~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 79 (128)
T 2ebk_A 10 EPVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKA-EGFMDADIPLELVFHLPVNYPSCLPGISINS 79 (128)
T ss_dssp HHHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEEC-CTTTTCCCEEEEEEEECSSTTSSCCCCCCCC
T ss_pred HHHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecC-CCCCCCCeEEEEEEECCCCCCCCCCeEEEEh
Confidence 3567788887642 21 12322 1112234577788863 2211112478999999999999999987664
No 62
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=93.81 E-value=0.13 Score=33.54 Aligned_cols=24 Identities=21% Similarity=0.342 Sum_probs=22.0
Q ss_pred eEEEEEeCCCCCCCCCCeEEEecc
Q 033385 53 VFKLELFLPEEYPMAAPKVRFLTK 76 (120)
Q Consensus 53 ~f~~~i~fp~~YP~~pP~v~f~t~ 76 (120)
.+.+.|.+|.+||..+|.|...+.
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~~ 99 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRSS 99 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEECS
T ss_pred eEEEEEEcCCCCCCCCCcEEEEeC
Confidence 799999999999999999998763
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=92.57 E-value=0.084 Score=34.29 Aligned_cols=25 Identities=28% Similarity=0.595 Sum_probs=22.0
Q ss_pred CeEEEEEeCCCCCCCCCCeEEEecc
Q 033385 52 GVFKLELFLPEEYPMAAPKVRFLTK 76 (120)
Q Consensus 52 ~~f~~~i~fp~~YP~~pP~v~f~t~ 76 (120)
-.+.+.+.+|.+||..||.+.....
T Consensus 73 ~~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 73 AMFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEEECSSTTSSCCCCEEECT
T ss_pred ceEEEEEECCCCCCCCCCeEEEEcc
Confidence 3688999999999999999988764
No 64
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=86.42 E-value=0.54 Score=20.76 Aligned_cols=23 Identities=22% Similarity=0.326 Sum_probs=18.6
Q ss_pred CCchHHHHHHHHHHHhhCCCCCe
Q 033385 3 NSNLPRRIIKETQRLLSEPAPGI 25 (120)
Q Consensus 3 ~~~~~~RL~~E~~~l~~~~~~~~ 25 (120)
+-+...||.-|+..++.+++.|.
T Consensus 3 nlseldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 3 NLSELDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred cHHHHHHHHHHHhhhccCCCCCC
Confidence 34556799999999999988774
No 65
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=44.97 E-value=24 Score=24.04 Aligned_cols=25 Identities=20% Similarity=0.493 Sum_probs=22.0
Q ss_pred CCCeEEEEEeCCCCCCC-----CCCeEEEe
Q 033385 50 EGGVFKLELFLPEEYPM-----AAPKVRFL 74 (120)
Q Consensus 50 ~g~~f~~~i~fp~~YP~-----~pP~v~f~ 74 (120)
+.|.|.|+=.+|--||. .||.|+|.
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~ 138 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLI 138 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEE
Confidence 45889999999999998 78998886
No 66
>2c5k_P Vacuolar protein sorting protein 51; protein transport/complex, snare, VFT complex, protein transport, phosphorylation; 2.05A {Saccharomyces cerevisiae}
Probab=37.58 E-value=16 Score=16.43 Aligned_cols=14 Identities=21% Similarity=0.192 Sum_probs=9.2
Q ss_pred hHHHHHHHHHHHhh
Q 033385 6 LPRRIIKETQRLLS 19 (120)
Q Consensus 6 ~~~RL~~E~~~l~~ 19 (120)
..|++++|+..|+.
T Consensus 11 dKR~lLkeyY~L~~ 24 (26)
T 2c5k_P 11 DRRLLLREFYNLEN 24 (26)
T ss_dssp HHHHHHHHHHHC--
T ss_pred HHHHHHHHHHhhhc
Confidence 34678899988864
No 67
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=36.42 E-value=92 Score=20.61 Aligned_cols=43 Identities=16% Similarity=0.315 Sum_probs=30.8
Q ss_pred CCCcEEEEEEeCCCCCCCCCCeEEEEEeCCCCCCCCCCeEEEecc
Q 033385 32 DNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTK 76 (120)
Q Consensus 32 ~~~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~ 76 (120)
+.-..|.|-+.|+.+.-...-.=++...+.+.||. |...+..+
T Consensus 30 ~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~P 72 (175)
T 3rls_A 30 EHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEAP 72 (175)
T ss_dssp TCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECSS
T ss_pred CCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeCC
Confidence 45679999999876654444556788889999974 66556554
No 68
>3pft_A Flavin reductase; desulfurization, oxidoreductase; HET: FMN; 1.60A {Mycobacterium goodii} SCOP: b.45.1.0
Probab=36.04 E-value=22 Score=22.64 Aligned_cols=30 Identities=20% Similarity=0.475 Sum_probs=23.9
Q ss_pred CCCCeEEEe---ccCccccccCCCcEecccCCC
Q 033385 66 MAAPKVRFL---TKIYHPNIDKLGRICLDILKD 95 (120)
Q Consensus 66 ~~pP~v~f~---t~i~hPnv~~~G~vcl~~l~~ 95 (120)
.+||.|.+. +.--|+++..+|.+|+++|.+
T Consensus 42 ~~PP~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~ 74 (157)
T 3pft_A 42 LEPPLVAFAVQNSSTTWPKLKDLPSLGISVLGE 74 (157)
T ss_dssp TTTTEEEEEEETTCSSHHHHTTSSCEEEEECBT
T ss_pred CCCcEEEEEECCCCchHHHHHhCCEEEEEECCH
Confidence 368988885 335688999999999999964
No 69
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=32.14 E-value=37 Score=14.74 Aligned_cols=13 Identities=31% Similarity=0.399 Sum_probs=9.5
Q ss_pred hHHHHHHHHHHHh
Q 033385 6 LPRRIIKETQRLL 18 (120)
Q Consensus 6 ~~~RL~~E~~~l~ 18 (120)
.+|.|.+|+++-+
T Consensus 9 lqkkirkelkqrq 21 (26)
T 1m46_B 9 LQKKIRKELKQRQ 21 (26)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4678888988643
No 70
>2rf4_B DNA-directed RNA polymerase I subunit RPA4; transferase DNA/RNA, DNA-binding, phosphorylation, POL I, POLI, rpoli, nuclear protein; 3.10A {Saccharomyces cerevisiae}
Probab=31.97 E-value=20 Score=21.00 Aligned_cols=13 Identities=23% Similarity=0.365 Sum_probs=10.1
Q ss_pred chHHHHHHHHHHH
Q 033385 5 NLPRRIIKETQRL 17 (120)
Q Consensus 5 ~~~~RL~~E~~~l 17 (120)
+..||+++|++-|
T Consensus 62 sQLKRvQRdlrGL 74 (87)
T 2rf4_B 62 SQLKRIQRDFKGL 74 (87)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHhhcCC
Confidence 3568999998866
No 71
>1ogy_B Diheme cytochrome C NAPB molecule: nitrate reductase; oxidoreductase; HET: MGD HEC; 3.2A {Rhodobacter sphaeroides} SCOP: a.138.1.3
Probab=30.55 E-value=21 Score=22.57 Aligned_cols=35 Identities=17% Similarity=0.335 Sum_probs=21.8
Q ss_pred EEeCCCCCCCCCCeEEEeccCccccccCCCcEecccC
Q 033385 57 ELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL 93 (120)
Q Consensus 57 ~i~fp~~YP~~pP~v~f~t~i~hPnv~~~G~vcl~~l 93 (120)
...+..+|+..||.|=-...=| -|+.++.-||+=-
T Consensus 28 ~~~~~R~y~~qPPlIPH~i~gy--~It~~~N~ClsCH 62 (130)
T 1ogy_B 28 DRRVGRNYPEQPPVIPHSIEGY--QLSVNANRCLECH 62 (130)
T ss_dssp CCCCCCSSTTSCCCBCSCCTTC--CBSSSCBGGGGTS
T ss_pred CcccccccCCCCCCCCccccCc--eecCCCCcCcccC
Confidence 4578899999999982211111 3445677777543
No 72
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=27.28 E-value=39 Score=23.54 Aligned_cols=25 Identities=20% Similarity=0.559 Sum_probs=21.5
Q ss_pred CCCeEEEEEeCCCCCC-------CCCCeEEEe
Q 033385 50 EGGVFKLELFLPEEYP-------MAAPKVRFL 74 (120)
Q Consensus 50 ~g~~f~~~i~fp~~YP-------~~pP~v~f~ 74 (120)
+.|.|.|+=.+|--|| ..||.|+|.
T Consensus 134 ~~G~y~F~TI~Pg~Yp~~~~~~~~RpaHIH~~ 165 (241)
T 2bum_B 134 DNGYYVFRTIKPGPYPWRNRINEWRPAHIHFS 165 (241)
T ss_dssp TTSEEEEEEECCCCEEESSSTTEEECSEEEEE
T ss_pred CCceEEEEEecCCccccCCCCCCCcCceEEEE
Confidence 3589999999999998 478999886
No 73
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=26.86 E-value=46 Score=22.45 Aligned_cols=23 Identities=26% Similarity=0.371 Sum_probs=20.7
Q ss_pred CeEEEEEeCCCCCCCC-----CCeEEEe
Q 033385 52 GVFKLELFLPEEYPMA-----APKVRFL 74 (120)
Q Consensus 52 ~~f~~~i~fp~~YP~~-----pP~v~f~ 74 (120)
|.|.|+=.+|--||.. ||.|+|.
T Consensus 102 G~~~F~TI~Pg~Y~~~~g~~rp~HIH~~ 129 (200)
T 3t63_A 102 GEWTLHTVKPGVVNNAAGVPMAPHINIS 129 (200)
T ss_dssp CSEEEEEECCCCEECTTSCEECSCEEEE
T ss_pred CEEEEEEECCcCcCCCCCCccCCEEEEE
Confidence 8899999999999986 8888886
No 74
>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A
Probab=26.37 E-value=1.3e+02 Score=19.15 Aligned_cols=44 Identities=14% Similarity=0.227 Sum_probs=31.7
Q ss_pred CCcEEE--EEEeCCCCCCCC-CCeEEEEEeCCCCCCCCCCeEEEeccCc
Q 033385 33 NMRYFN--VMILGPTQSPYE-GGVFKLELFLPEEYPMAAPKVRFLTKIY 78 (120)
Q Consensus 33 ~~~~w~--~~i~gp~~t~y~-g~~f~~~i~fp~~YP~~pP~v~f~t~i~ 78 (120)
.+..|. +.+.|+++.... .-.=++...+.+.|+ .|...+..+.|
T Consensus 31 ~~h~WtieV~vr~~~g~ei~~~~i~kV~f~LH~sF~--np~r~v~~pPF 77 (140)
T 3qrl_A 31 PVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFA--NPNRTFTDPPF 77 (140)
T ss_dssp CCEEEEEEEEEECTTSCEECCTTEEEEEEECCTTSS--SCEEEECSTTC
T ss_pred cccEeeEEEEEeCCCCCcCchheEEEEEEEeCCCCC--CCeEEEcCCCc
Confidence 346998 788888877554 345567888889988 48777776644
No 75
>3g9r_A Fusion complex of HIV-1 envelope glycoprotein and saccharomyces cerevisiae general...; GP41, MPER, membrane fusion, AIDS; 2.00A {Human immunodeficiency virus 1}
Probab=26.13 E-value=48 Score=16.38 Aligned_cols=15 Identities=27% Similarity=0.350 Sum_probs=11.5
Q ss_pred chHHHHHHHHHHHhh
Q 033385 5 NLPRRIIKETQRLLS 19 (120)
Q Consensus 5 ~~~~RL~~E~~~l~~ 19 (120)
+..+|+..|++.+.+
T Consensus 28 ~~~~~~~~~~~~~~~ 42 (42)
T 3g9r_A 28 SKIKRIENEIKRIKK 42 (42)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcC
Confidence 346899999998753
No 76
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=25.84 E-value=43 Score=23.31 Aligned_cols=24 Identities=17% Similarity=0.362 Sum_probs=21.4
Q ss_pred CCeEEEEEeCCCCCCC-------CCCeEEEe
Q 033385 51 GGVFKLELFLPEEYPM-------AAPKVRFL 74 (120)
Q Consensus 51 g~~f~~~i~fp~~YP~-------~pP~v~f~ 74 (120)
.|.|.|+=.+|--||. .||.|+|.
T Consensus 134 ~G~y~F~TI~Pg~Yp~p~~~~~~Rp~HIHf~ 164 (238)
T 3t63_M 134 DGYYSFRTIKPGPAPWRNGPNDWRPAHIYFG 164 (238)
T ss_dssp TSEEEEEEECCCCEEESSSTTEEECSEEEEE
T ss_pred CceEEEEEECCcCccCCCCCCCCcCCeEEEE
Confidence 4899999999999986 78999886
No 77
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=25.80 E-value=41 Score=24.39 Aligned_cols=24 Identities=17% Similarity=0.344 Sum_probs=20.6
Q ss_pred CCeEEEEEeCCCCCC------------------CCCCeEEEe
Q 033385 51 GGVFKLELFLPEEYP------------------MAAPKVRFL 74 (120)
Q Consensus 51 g~~f~~~i~fp~~YP------------------~~pP~v~f~ 74 (120)
.|.|.|+-.+|--|| ..||.|+|.
T Consensus 188 ~G~y~F~TI~Pg~Y~ip~dGp~G~lL~~~grh~~RpaHIH~~ 229 (312)
T 2xsu_A 188 NGKYVALTTMPVGYGCPPEGTTQALLNKLGRHGNRPSHVHYF 229 (312)
T ss_dssp TSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CceEEEEEECcCcccCCCCCcHHHHHHHhhccCCCCceEEEE
Confidence 488999999999998 468888886
No 78
>2ccv_A Helix pomatia agglutinin; lectin, snail; HET: A2G NAG; 1.30A {Helix pomatia} SCOP: b.154.1.1 PDB: 2cgy_A* 2cgz_A* 2ce6_A
Probab=25.56 E-value=83 Score=18.59 Aligned_cols=25 Identities=12% Similarity=0.119 Sum_probs=20.2
Q ss_pred CCeEEEEEeCCCCCCCCCCeEEEecc
Q 033385 51 GGVFKLELFLPEEYPMAAPKVRFLTK 76 (120)
Q Consensus 51 g~~f~~~i~fp~~YP~~pP~v~f~t~ 76 (120)
+..+...|.|+..|+. +|.|.+.-.
T Consensus 28 ~R~~~~~V~F~~~F~~-~P~V~v~l~ 52 (101)
T 2ccv_A 28 TRELAKNITFASPYCR-PPVVLLSIT 52 (101)
T ss_dssp CEEEEEEEECSSCCSS-CCEEEEEEE
T ss_pred ceEEEEEeEeCcccCC-CCEEEEEeE
Confidence 3478889999999995 999988643
No 79
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=24.88 E-value=44 Score=24.25 Aligned_cols=24 Identities=21% Similarity=0.519 Sum_probs=20.8
Q ss_pred CCeEEEEEeCCCCCC------------------CCCCeEEEe
Q 033385 51 GGVFKLELFLPEEYP------------------MAAPKVRFL 74 (120)
Q Consensus 51 g~~f~~~i~fp~~YP------------------~~pP~v~f~ 74 (120)
.|.|.|+=.+|--|| ..||.|+|.
T Consensus 184 ~G~y~F~TI~Pg~Y~~p~dGp~g~lL~~~grh~~RpaHIHf~ 225 (311)
T 2azq_A 184 EGRYRARSIVPSGYGCDPQGPTQECLDLLGRHGQRPAHVHFF 225 (311)
T ss_dssp TCEEEEEEECCCCEECCTTSHHHHHHHHHTCCCEECCEEEEE
T ss_pred CceEEEEEEcCCCcCCCCCCcHHHHHHhhhccCCCCceEEEE
Confidence 488999999999998 458999985
No 80
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=24.28 E-value=46 Score=23.90 Aligned_cols=25 Identities=28% Similarity=0.607 Sum_probs=21.1
Q ss_pred CCCeEEEEEeCCCCCC------------------CCCCeEEEe
Q 033385 50 EGGVFKLELFLPEEYP------------------MAAPKVRFL 74 (120)
Q Consensus 50 ~g~~f~~~i~fp~~YP------------------~~pP~v~f~ 74 (120)
+.|.|.|+=.+|--|| ..||.|+|.
T Consensus 183 ~~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~ 225 (293)
T 1tmx_A 183 PDGGYAFWAITPTPYPIPHDGPVGRMLAATGRSPMRASHLHFM 225 (293)
T ss_dssp TTSEEEEEEECCCCEECCCSSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CCceEEEEEECCCcccCCCCCchHHHHHhcccCCCCCceEEEE
Confidence 3588999999999998 458999886
No 81
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=23.44 E-value=49 Score=23.73 Aligned_cols=24 Identities=25% Similarity=0.688 Sum_probs=20.8
Q ss_pred CCeEEEEEeCCCCCCC------------------CCCeEEEe
Q 033385 51 GGVFKLELFLPEEYPM------------------AAPKVRFL 74 (120)
Q Consensus 51 g~~f~~~i~fp~~YP~------------------~pP~v~f~ 74 (120)
.|.|.|+=.+|--||. .||.|+|.
T Consensus 181 ~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~ 222 (290)
T 3n9t_A 181 DGCFAIQTTVPVCYPIPTDGPVGEMLDAANRHAWRPAHLHFM 222 (290)
T ss_dssp TSEEEEEEECCCCEECCCSSHHHHHHHHHTCCCEECCEEEEE
T ss_pred CceEEEEEeCCCCcCCCCCCcHHHHHHhccCCCCcCceEEEE
Confidence 4889999999999994 58999886
No 82
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=23.34 E-value=52 Score=20.47 Aligned_cols=33 Identities=18% Similarity=0.218 Sum_probs=21.5
Q ss_pred ccCCCcEecccCCCCCCccCcHHHHHHHHHHhh
Q 033385 82 IDKLGRICLDILKDKWSPALQIRTVLLRGEYFL 114 (120)
Q Consensus 82 v~~~G~vcl~~l~~~W~p~~~v~~vl~~i~~~l 114 (120)
|+++|+|-......+.....+..+++..|..+|
T Consensus 139 iD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~ll 171 (171)
T 2yzh_A 139 IDKEGKVAYVQLVPEITEEPNYDEVVNKVKELI 171 (171)
T ss_dssp ECTTSBEEEEEECSBTTSCCCCHHHHHHHHHC-
T ss_pred EcCCCeEEEEEeCCCcCCCCCHHHHHHHHHhhC
Confidence 567898876655434444556778888887764
No 83
>2ecu_A Flavin reductase (HPAC) of 4-hydroxyphenylacetate monooxygnease; flavin diffusible, two-component monooxyge oxidoreductase; HET: 1PG 12P; 1.30A {Thermus thermophilus} PDB: 2ecr_A* 2ed4_A*
Probab=23.29 E-value=20 Score=22.63 Aligned_cols=31 Identities=16% Similarity=0.389 Sum_probs=24.2
Q ss_pred CCCCeEEEe---ccCccccccCCCcEecccCCCC
Q 033385 66 MAAPKVRFL---TKIYHPNIDKLGRICLDILKDK 96 (120)
Q Consensus 66 ~~pP~v~f~---t~i~hPnv~~~G~vcl~~l~~~ 96 (120)
.+||.|.+. +.--|+++..+|.+|++++.++
T Consensus 40 ~~Pp~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~ 73 (149)
T 2ecu_A 40 LEPPLVALAVSERAKLLPVLEGAGAFTVSLLREG 73 (149)
T ss_dssp TTTTEEEEEEETTCTHHHHHHHHTEEEEEECBTT
T ss_pred CCCCEEEEEECCCChhHHHHHhCCEEEEEECcHH
Confidence 468988886 3356888999999999999643
No 84
>1u9d_A Hypothetical protein VC0714; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics; 1.70A {Vibrio cholerae o1 biovar eltor str} SCOP: d.80.1.5
Probab=22.96 E-value=1.4e+02 Score=18.40 Aligned_cols=28 Identities=18% Similarity=0.205 Sum_probs=22.6
Q ss_pred hHHHHHHHHHHHhhCCCCCeEEEecCCC
Q 033385 6 LPRRIIKETQRLLSEPAPGISASPSEDN 33 (120)
Q Consensus 6 ~~~RL~~E~~~l~~~~~~~~~~~~~~~~ 33 (120)
..+.|..||.++.+-+...++++..+..
T Consensus 32 lS~~Lid~La~i~~~~~e~fTle~i~s~ 59 (122)
T 1u9d_A 32 LVPTLLNELSSLLSTARNAFTFELINTQ 59 (122)
T ss_dssp HHHHHHHHHHHHHTCCGGGCEEEECCCC
T ss_pred HhHHHHHHHHHHHCCCcccEEEEEeeeE
Confidence 4568899999999999999988865543
No 85
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=22.35 E-value=54 Score=23.01 Aligned_cols=24 Identities=21% Similarity=0.567 Sum_probs=20.3
Q ss_pred CCeEEEEEeCCCCCC------------------CCCCeEEEe
Q 033385 51 GGVFKLELFLPEEYP------------------MAAPKVRFL 74 (120)
Q Consensus 51 g~~f~~~i~fp~~YP------------------~~pP~v~f~ 74 (120)
.|.|.|+=.+|-.|| ..||.|+|.
T Consensus 154 ~G~y~F~TI~Pg~Y~~p~dGp~G~ll~~~grh~~RpaHIH~~ 195 (254)
T 2boy_A 154 NGRFTLRTIVPAPYEIPKNGPTGALLAAAGWHAWRPAHLHWI 195 (254)
T ss_dssp TSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CceEEEEEECCccccCCCCCcHHHHHHhcccccCCCceEEEE
Confidence 488999999999887 467899886
No 86
>1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A*
Probab=21.84 E-value=56 Score=23.70 Aligned_cols=24 Identities=17% Similarity=0.576 Sum_probs=20.7
Q ss_pred CCeEEEEEeCCCCCC------------------CCCCeEEEe
Q 033385 51 GGVFKLELFLPEEYP------------------MAAPKVRFL 74 (120)
Q Consensus 51 g~~f~~~i~fp~~YP------------------~~pP~v~f~ 74 (120)
.|.|.|+=.+|--|| ..||.|+|.
T Consensus 187 ~G~y~F~TI~Pg~Yp~p~dgp~g~lL~~~grh~~RpaHIHf~ 228 (311)
T 1dmh_A 187 NGQYRVRTILPAGYGCPPEGPTQQLLNQLGRHGNRPAHIHYF 228 (311)
T ss_dssp TSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECSEEEEE
T ss_pred CceEEEEEEcCCcccCCCCCcHHHHHHhcccCCCCCceEEEE
Confidence 488999999999997 458999986
No 87
>2d37_A Hypothetical NADH-dependent FMN oxidoreductase; flavin reductase; HET: FMN NAD; 1.70A {Sulfolobus tokodaii} PDB: 2d36_A* 2d38_A*
Probab=20.78 E-value=41 Score=21.86 Aligned_cols=30 Identities=13% Similarity=0.176 Sum_probs=24.0
Q ss_pred CCCCCeEEEe---ccCccccccCCCcEecccCC
Q 033385 65 PMAAPKVRFL---TKIYHPNIDKLGRICLDILK 94 (120)
Q Consensus 65 P~~pP~v~f~---t~i~hPnv~~~G~vcl~~l~ 94 (120)
-.+||.|.+. +.--|++|..+|.+|+++|.
T Consensus 59 S~~PPlv~v~i~~~~~T~~~i~~sg~F~Vnvl~ 91 (176)
T 2d37_A 59 SLNPPLVSFFADRMKGNDIPYKESKYFVVNFTD 91 (176)
T ss_dssp ETTTTEEEEEEEGGGTTTHHHHTCSEEEEEEEC
T ss_pred cCCCCEEEEEECCCchHHHHHHhCCeEEEEchh
Confidence 3478998886 33568899999999999986
No 88
>3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A*
Probab=20.74 E-value=55 Score=23.37 Aligned_cols=24 Identities=13% Similarity=0.451 Sum_probs=20.1
Q ss_pred CCeEEEEEeCCCCCC------------------CCCCeEEEe
Q 033385 51 GGVFKLELFLPEEYP------------------MAAPKVRFL 74 (120)
Q Consensus 51 g~~f~~~i~fp~~YP------------------~~pP~v~f~ 74 (120)
.|.|.|+=.+|-.|| ..||.|+|.
T Consensus 183 dG~y~F~TI~Pg~Yp~p~dGp~G~lL~~~grh~~RpaHIH~~ 224 (280)
T 3hhy_A 183 EGRYEITTIQPAPYQIPTDGPTGQFIEAQNGHPWRPAHLHLI 224 (280)
T ss_dssp TSEEEEEEECCCCEECCCSSHHHHHHHHTTCCCEECSCEEEE
T ss_pred CceEEEEEECCcCcCCCCCCcHHHHHHhcCCCCCCCcEEEEE
Confidence 488999999998887 468888886
No 89
>4hx6_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE; 1.89A {Streptomyces globisporus}
Probab=20.67 E-value=27 Score=22.96 Aligned_cols=30 Identities=17% Similarity=0.394 Sum_probs=23.5
Q ss_pred CCCCeEEEe---ccCccccccCCCcEecccCCC
Q 033385 66 MAAPKVRFL---TKIYHPNIDKLGRICLDILKD 95 (120)
Q Consensus 66 ~~pP~v~f~---t~i~hPnv~~~G~vcl~~l~~ 95 (120)
.+||.|.|. +.--|.||..+|.+|++++.+
T Consensus 57 ~~PPlv~v~i~~~~~T~~~i~~~g~F~Vnvl~~ 89 (185)
T 4hx6_A 57 LSPPLVLICVGKDAVMHQRLTALPTFAVSVLEA 89 (185)
T ss_dssp TTTTEEEEEEETTSHHHHHHHHSCEEEEEECBT
T ss_pred CCCCEEEEEECCCcHHHHHHHHCCeEEEEECCH
Confidence 478988885 234578898999999999964
Done!