Query 033390
Match_columns 120
No_of_seqs 102 out of 405
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 22:18:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033390.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033390hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xwv_A DER F II; beta sheets, 99.9 7.8E-23 2.7E-27 137.7 7.6 101 20-120 2-107 (129)
2 1nep_A EPV20, BNPC2, epididyma 99.9 1.7E-22 6E-27 136.1 8.6 102 19-120 1-108 (130)
3 2ag4_A GM2-AP, ganglioside GM2 99.9 2.5E-22 8.5E-27 140.2 9.2 101 19-120 3-142 (164)
4 3m7o_A Lymphocyte antigen 86; 99.7 4.8E-18 1.6E-22 117.4 7.1 94 22-120 41-141 (162)
5 3mtx_A Protein MD-1; LY86, RP1 99.5 2.4E-13 8.3E-18 92.5 9.1 94 21-119 19-119 (151)
6 3vq2_C Lymphocyte antigen 96; 99.2 8.8E-11 3E-15 79.5 9.7 96 20-119 15-117 (144)
7 2e56_A Lymphocyte antigen 96; 98.2 1.5E-05 5.1E-10 53.4 9.6 95 21-119 16-117 (144)
8 2r5o_A Putative ATP binding co 93.4 0.34 1.2E-05 33.3 7.2 85 33-119 47-141 (188)
9 3idu_A Uncharacterized protein 91.6 1.2 4E-05 29.1 7.6 74 33-119 18-92 (127)
10 1v10_A Laccase; multicopper bl 88.2 0.67 2.3E-05 36.8 5.0 14 31-44 25-38 (521)
11 2kut_A Uncharacterized protein 87.1 0.76 2.6E-05 29.9 3.9 75 39-120 5-89 (122)
12 2l0d_A Cell surface protein; s 86.9 4.4 0.00015 25.8 7.7 45 33-79 4-48 (114)
13 1roc_A Anti-silencing protein 82.4 3.3 0.00011 28.0 5.5 77 33-114 4-87 (155)
14 3t6v_A Laccase; beta barrel, o 79.8 8 0.00027 30.5 7.8 15 31-45 6-20 (495)
15 2i32_A Anti-silencing factor 1 79.6 4.8 0.00016 27.9 5.6 78 33-113 28-110 (182)
16 3pxl_A Laccase; 4-copper prote 79.6 7.7 0.00026 30.6 7.6 13 32-44 6-18 (499)
17 2idc_A Anti-silencing protein 79.6 4.3 0.00015 28.1 5.3 73 33-110 5-82 (179)
18 2cu9_A Spcia1, histone chapero 79.5 4.7 0.00016 27.4 5.5 76 33-114 3-86 (161)
19 2hue_A Anti-silencing protein 77.8 5.5 0.00019 27.4 5.5 75 33-110 9-86 (175)
20 3sqr_A Laccase; multicopper ox 77.4 5.6 0.00019 32.2 6.3 22 91-117 143-165 (580)
21 1aoz_A Ascorbate oxidase; oxid 76.5 12 0.0004 29.7 7.9 22 91-117 79-101 (552)
22 2io5_A ASF1A protein; chaperon 75.9 6.1 0.00021 27.2 5.3 75 33-113 6-88 (175)
23 2q3z_A Transglutaminase 2; tra 75.7 5.4 0.00018 33.1 5.8 74 45-120 32-118 (687)
24 3isy_A Bsupi, intracellular pr 74.6 2.7 9.3E-05 27.1 3.1 72 48-120 16-98 (120)
25 1xwv_A DER F II; beta sheets, 74.4 4.1 0.00014 26.2 4.0 33 43-75 77-110 (129)
26 1nep_A EPV20, BNPC2, epididyma 72.2 6 0.0002 25.4 4.4 33 43-75 79-111 (130)
27 1vjj_A Protein-glutamine gluta 71.4 7.4 0.00025 32.3 5.6 71 45-119 30-112 (692)
28 3tas_A Small laccase, multi-co 68.9 4.3 0.00015 29.8 3.5 25 86-110 78-103 (313)
29 3m7o_A Lymphocyte antigen 86; 67.8 6.4 0.00022 26.8 3.9 33 42-74 110-143 (162)
30 1ex0_A Coagulation factor XIII 67.4 4.8 0.00017 33.6 3.7 72 45-119 75-159 (731)
31 2zwn_A Two-domain type laccase 67.2 8.9 0.00031 28.4 5.0 22 91-117 79-101 (339)
32 4f27_A Clumping factor B; DEV- 66.7 17 0.00059 26.8 6.5 42 32-73 38-82 (363)
33 1g0d_A Protein-glutamine gamma 61.6 16 0.00054 30.4 5.7 74 45-119 33-110 (695)
34 3t9w_A Small laccase, multi-co 58.9 8.6 0.00029 28.1 3.5 18 90-107 98-116 (299)
35 1suj_A CONE arrestin; sensory 58.4 50 0.0017 25.4 7.8 72 36-114 36-122 (392)
36 2q9o_A Laccase-1; multicopper 56.1 25 0.00084 28.0 5.9 22 91-117 112-135 (559)
37 2p9r_A Alpha-2-M, alpha-2-macr 55.5 13 0.00045 22.3 3.5 21 97-119 60-80 (102)
38 2vtc_A CEL61B, cellulase; hydr 54.8 8.6 0.00029 27.7 2.8 17 103-119 160-176 (249)
39 3mtx_A Protein MD-1; LY86, RP1 54.6 24 0.00083 23.6 4.8 32 42-73 89-121 (151)
40 2r7e_B Coagulation factor VIII 53.0 9.6 0.00033 31.8 3.2 56 46-109 203-258 (770)
41 3zx1_A Oxidoreductase, putativ 52.3 12 0.00042 29.3 3.6 25 91-117 121-145 (481)
42 1sdd_A Coagulation factor V; c 50.1 10 0.00036 27.6 2.7 18 92-110 111-128 (306)
43 4eir_A Polysaccharide monooxyg 49.8 13 0.00044 26.5 3.0 17 103-119 133-149 (223)
44 3eja_A Protein GH61E; beta san 49.7 12 0.0004 26.4 2.7 18 102-119 117-134 (208)
45 4eis_A Polysaccharide monooxyg 47.9 13 0.00045 26.5 2.8 17 103-119 136-152 (225)
46 2xu9_A Laccase; oxidoreductase 47.6 23 0.0008 27.1 4.4 25 91-117 85-109 (439)
47 3zud_A GH61 isozyme A; hydrola 46.0 14 0.00048 26.4 2.7 17 103-119 140-156 (228)
48 2f68_X Collagen adhesin; beta 46.0 20 0.00069 26.5 3.7 41 33-73 14-56 (313)
49 1zpu_A Iron transport multicop 42.7 19 0.00065 28.5 3.3 23 91-117 79-102 (534)
50 1hfu_A Laccase 1; oxidoreducta 41.6 19 0.00064 28.2 3.1 23 91-117 83-106 (503)
51 3aw5_A Multicopper oxidase; be 41.5 19 0.00064 27.8 3.0 22 92-117 78-100 (448)
52 2uxt_A Protein SUFI, SUFI; oxi 41.5 15 0.00051 28.4 2.5 22 92-117 90-112 (451)
53 1kmt_A RHO GDP-dissociation in 41.1 44 0.0015 22.0 4.4 37 45-81 40-77 (141)
54 2j5w_A Ceruloplasmin, ferroxid 40.4 29 0.001 29.9 4.3 19 92-111 146-164 (1065)
55 2r7e_A Coagulation factor VIII 39.6 17 0.00059 30.1 2.7 25 88-113 497-521 (742)
56 3vq2_C Lymphocyte antigen 96; 38.9 61 0.0021 21.5 4.8 33 41-73 86-119 (144)
57 1pfs_A PF3 SSDBP, PF3 single-s 38.7 33 0.0011 20.2 3.0 17 92-108 45-61 (78)
58 3b72_A Lysozyme C; hen egg-whi 37.4 6.3 0.00022 26.2 -0.2 25 1-27 1-25 (147)
59 3rfr_A PMOB; membrane, oxidore 36.8 1.5E+02 0.005 23.1 9.8 75 33-119 42-134 (419)
60 2r7e_A Coagulation factor VIII 33.4 16 0.00055 30.3 1.5 15 91-105 125-140 (742)
61 3g5w_A Multicopper oxidase typ 32.9 35 0.0012 25.0 3.2 22 91-117 78-100 (318)
62 1j8r_A PAPG adhesin, pyeloneph 32.8 43 0.0015 22.9 3.3 18 102-119 134-151 (196)
63 1ds6_B RHO GDP-dissociation in 31.2 50 0.0017 22.6 3.5 36 46-81 80-116 (180)
64 2d7p_A Filamin-C; beta-sandwic 29.6 44 0.0015 20.6 2.9 23 53-78 66-88 (112)
65 2z1p_A ACE, collagen adhesin p 29.3 43 0.0015 25.3 3.2 40 33-72 17-59 (348)
66 1g4m_A Beta-arrestin1; sensory 29.0 22 0.00074 27.3 1.5 19 96-114 107-125 (393)
67 1doa_B RHO GDI 1, protein (GDP 27.5 64 0.0022 22.9 3.6 36 46-81 119-155 (219)
68 1jb0_F Photosystem 1 reaction 27.3 16 0.00056 24.7 0.5 29 1-29 1-34 (164)
69 3od3_A Blue copper oxidase CUE 25.9 58 0.002 25.6 3.5 22 92-117 88-110 (488)
70 3abg_A Bilirubin oxidase; clea 25.3 80 0.0027 24.9 4.3 14 91-104 108-122 (534)
71 2xom_A Arabinogalactan endo-1, 25.0 72 0.0025 20.7 3.4 19 99-119 58-76 (152)
72 2dmc_A Filamin-B; beta-sandwic 24.7 34 0.0012 21.4 1.6 30 46-78 63-92 (116)
73 2h6o_A Major outer envelope gl 24.4 1.1E+02 0.0038 23.3 4.6 32 46-77 173-204 (470)
74 3gdc_A Multicopper oxidase; be 24.3 49 0.0017 23.7 2.6 22 91-117 107-129 (288)
75 2xzz_A Protein-glutamine gamma 23.9 1.3E+02 0.0044 18.3 4.4 29 44-72 14-44 (102)
76 2jen_A Xyloglucanase, endo-bet 23.5 21 0.0007 25.9 0.4 42 1-44 7-51 (261)
77 3cg8_A Laccase; oxidoreductase 23.3 80 0.0027 23.3 3.7 16 91-106 118-134 (343)
78 1lyq_A PCOC copper resistance 22.1 77 0.0026 19.4 2.9 12 94-105 75-86 (104)
79 3kw8_A Laccase, putative coppe 21.8 93 0.0032 22.0 3.7 16 90-105 76-92 (276)
80 2x41_A Beta-glucosidase; hydro 21.7 2E+02 0.0067 23.7 6.0 83 32-119 601-696 (721)
81 2c9r_A COPC, copper resistance 20.2 89 0.0031 18.9 2.9 12 94-105 73-84 (102)
No 1
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=99.88 E-value=7.8e-23 Score=137.69 Aligned_cols=101 Identities=21% Similarity=0.350 Sum_probs=88.4
Q ss_pred ccceeecCCCCCccEEEEEE-EEeCCCCCCCCceEEEEEEEecceecCcEEEEEEEECeEEec--CCCCCCCCCCCCCCC
Q 033390 20 AIGVKYCDKKKNYAVTIQQV-KIIPDPVVTGKPATFNISAVTGQAVYGGKVVINVAYFGVPVH--QETRDVCEEVSCPIA 96 (120)
Q Consensus 20 ~~~~~~C~~~~~~~~~v~~v-~i~P~p~~~G~~~~i~~~~~~~~~v~~g~~~v~~~~~gi~~~--~~~~dlC~~~~CPl~ 96 (120)
+..|++|+++....++|++| +..||+++||++++++++|+++++++++++.+.+.++|+++| ....|+|+.+.||++
T Consensus 2 ~~~~~~C~~~~~~~V~V~~C~~~~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~~~~CPl~ 81 (129)
T 1xwv_A 2 QVDVKDCANNEIKKVMVDGCHGSDPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACHFMKCPLV 81 (129)
T ss_dssp BBCCEESSSSCEEEEEETTCCBTSCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGGTSCSSBC
T ss_pred CceEEECcCCCccEEEECCCCCCCCCEEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccCCccCccc
Confidence 57899999865456666666 666669999999999999999999999999999999997555 678899999999999
Q ss_pred CC-cEEEEEEEecCCCCCCee-EEeC
Q 033390 97 AG-DFVLSHTQTLPSFTPPVR-LLHT 120 (120)
Q Consensus 97 ~G-~~~~~~s~~iP~~~P~g~-y~~~ 120 (120)
+| .|+|++++.|++.+|.++ |+++
T Consensus 82 ~G~~~~y~~~~~v~~~~P~v~~~~v~ 107 (129)
T 1xwv_A 82 KGQQYDAKYTWNVPKIAPKSENVVVT 107 (129)
T ss_dssp TTCEEEEEEEEECCTTSCCBSCEEEE
T ss_pred CCEEEEEEEEeEecccCCCCceEEEE
Confidence 99 799999999999999998 8863
No 2
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=99.88 E-value=1.7e-22 Score=136.10 Aligned_cols=102 Identities=17% Similarity=0.351 Sum_probs=85.8
Q ss_pred cccceeecCCCCC--ccEEEEEEEEeCCCCCCCCceEEEEEEEecceecCcEEEEEEEECeEEe--cCCCCCCCC-CCCC
Q 033390 19 QAIGVKYCDKKKN--YAVTIQQVKIIPDPVVTGKPATFNISAVTGQAVYGGKVVINVAYFGVPV--HQETRDVCE-EVSC 93 (120)
Q Consensus 19 ~~~~~~~C~~~~~--~~~~v~~v~i~P~p~~~G~~~~i~~~~~~~~~v~~g~~~v~~~~~gi~~--~~~~~dlC~-~~~C 93 (120)
++..|++|+++.+ ..++|++|+..||+++||++++++++|+++++++++++.+++.++|+++ +....|+|+ .+.|
T Consensus 1 ~~~~f~~C~~~~~~i~~V~V~~C~~~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~C 80 (130)
T 1nep_A 1 EPVKFKDCGSWVGVIKEVNVSPCPTQPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRC 80 (130)
T ss_dssp CBCCCEESCCCSEEEEEEEEESCSSSSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCS
T ss_pred CCcEEEECCCCCCeEeEEEECCCCCCCCEEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcC
Confidence 3578999998643 3455555555556789999999999999999999999999999999765 456789997 4899
Q ss_pred CCCCC-cEEEEEEEecCCCCCCeeEEeC
Q 033390 94 PIAAG-DFVLSHTQTLPSFTPPVRLLHT 120 (120)
Q Consensus 94 Pl~~G-~~~~~~s~~iP~~~P~g~y~~~ 120 (120)
|+++| .|+|++++.|++.+|.++|+++
T Consensus 81 Pl~~G~~~~y~~~lpV~~~~P~~~~~v~ 108 (130)
T 1nep_A 81 PIEKDKTYNYVNKLPVKNEYPSIKVVVE 108 (130)
T ss_dssp SBCTTCEEEEEEEEECCTTSCSSEEEEE
T ss_pred cccCCcEEEEEEEeEecccCCCccEEEE
Confidence 99999 7999999999999999999873
No 3
>2ag4_A GM2-AP, ganglioside GM2 activator; complex of single chain lipid and fatty acids, lipid binding; HET: LP3 OLA; 1.80A {Homo sapiens} SCOP: b.95.1.1 PDB: 1tjj_A* 2af9_A* 2ag2_A* 1pu5_A* 2ag9_A* 1g13_A* 1pub_A* 2agc_A*
Probab=99.87 E-value=2.5e-22 Score=140.21 Aligned_cols=101 Identities=19% Similarity=0.375 Sum_probs=88.9
Q ss_pred cccceeecCCCCCccEEEEEEEEeCCCCCCCCceEEEEEEEecceecCc-EEEEEEEE--C-e-EEecCCC-------CC
Q 033390 19 QAIGVKYCDKKKNYAVTIQQVKIIPDPVVTGKPATFNISAVTGQAVYGG-KVVINVAY--F-G-VPVHQET-------RD 86 (120)
Q Consensus 19 ~~~~~~~C~~~~~~~~~v~~v~i~P~p~~~G~~~~i~~~~~~~~~v~~g-~~~v~~~~--~-g-i~~~~~~-------~d 86 (120)
....|++|+++ ++.++|++++++|+|+++|+++++++++++++++++| ++++.+++ + + ++++..+ .|
T Consensus 3 ~~~~~~~C~~~-~~~~~i~~v~i~PdP~~~g~~~ti~~~~~l~~~i~~g~k~~v~v~~~~~g~~i~l~~~~~~GSC~y~D 81 (164)
T 2ag4_A 3 SSFSWDNCDEG-KDPAVIRSLTLEPDPIVVPGNVTLSVVGSTSVPLSSPLKVDLVLEKEVAGLWIKIPCTDYIGSCTFEH 81 (164)
T ss_dssp CCCEEEESSTT-TCSEEEEEEEEESSSEEESEEEEEEEEEEESSCBCSSCEEEEEEEEEETTEEEECBCBTTBSBCEECC
T ss_pred ccCEEecCCCC-CceEEEeEEEEeCCCCCCCCceEEEEEEEEeeccCCCCEEEEEEEEEecCceEEeeeeCCcCcccccc
Confidence 45789999986 6799999999999999999999999999999999999 68777765 3 3 7888877 79
Q ss_pred CCCCC---------------------CCCCCCCcEEEEEEE------ecCCCCCCeeEEeC
Q 033390 87 VCEEV---------------------SCPIAAGDFVLSHTQ------TLPSFTPPVRLLHT 120 (120)
Q Consensus 87 lC~~~---------------------~CPl~~G~~~~~~s~------~iP~~~P~g~y~~~ 120 (120)
+|+.+ .||+++|+|.++.+. .+|.++|+|+|+++
T Consensus 82 lC~~l~~~~~~~~~~~~~~~~~g~~~~CPi~~G~Y~l~~~~~~lp~~~lP~~l~~G~Y~v~ 142 (164)
T 2ag4_A 82 FCDVLDMLIPTGEPCPEPLRTYGLPCHCPFKEGTYSLPKSEFVVPDLELPSWLTTGNYRIE 142 (164)
T ss_dssp HHHHHHHHSCTTSCCCTTHHHHTCCCSSCBCSEEEEEEEEEEEECCCCCCTTCSSEEEEEE
T ss_pred hhHhhhhhcccccccCcccccCCccccCCCCCcEEEEeeeEeecCcccccCccCCceEEEE
Confidence 99952 899999999988776 89999999999974
No 4
>3m7o_A Lymphocyte antigen 86; beta sheet, glycoprotein, immunity, inflammatory response, I immunity, secreted, immune system; HET: NAG L9R NDG; 1.65A {Mus musculus} PDB: 3t6q_C* 3b2d_C* 3rg1_C*
Probab=99.73 E-value=4.8e-18 Score=117.38 Aligned_cols=94 Identities=14% Similarity=0.107 Sum_probs=83.6
Q ss_pred ceeecCCCCCccEEEEEEEEeCCCCCCCCceEEEEEEEecceecCcEEEEEEEECeEEecCCCCCCCCC-----CCCCCC
Q 033390 22 GVKYCDKKKNYAVTIQQVKIIPDPVVTGKPATFNISAVTGQAVYGGKVVINVAYFGVPVHQETRDVCEE-----VSCPIA 96 (120)
Q Consensus 22 ~~~~C~~~~~~~~~v~~v~i~P~p~~~G~~~~i~~~~~~~~~v~~g~~~v~~~~~gi~~~~~~~dlC~~-----~~CPl~ 96 (120)
.+++|++.. . .+++++||++.+|+++++++.+.+.+++....+++.+++++++++..++|+|+. +-||++
T Consensus 41 ~Y~~CD~~q--~---~~vsi~PC~~~~G~nl~i~a~~Ilr~dI~~ly~~l~v~~~~i~l~~~~~~lCe~~~~~~sfCp~~ 115 (162)
T 3m7o_A 41 VYQSCDPLQ--D---FGLSIDQCSKQIQSNLNIRFGIILRQDIRKLFLDITLMAKGSSILNYSYPLCEEDQPKFSFCGRR 115 (162)
T ss_dssp EEEECCTTC--C---CEEEESSCCSEECSSCEEEEEEECSSCCSEEEEEEEEEETTEEEEEEEEEEEETTBSSSSSTTCC
T ss_pred EEEeCCCCC--C---ceEECCCCCCCCCCcEEEEEEEEEcccceeeEEEEEEEECCEEccccccccccCCCCccccCCcC
Confidence 568998764 2 567999999999999999999999999996678999999999999999999996 479999
Q ss_pred CC-cEEEEEEEecCC-CCCCeeEEeC
Q 033390 97 AG-DFVLSHTQTLPS-FTPPVRLLHT 120 (120)
Q Consensus 97 ~G-~~~~~~s~~iP~-~~P~g~y~~~ 120 (120)
+| ++.++.++.+|+ ++|+|+|++.
T Consensus 116 KGE~v~~~~~v~~p~~e~P~G~Y~v~ 141 (162)
T 3m7o_A 116 KGEQIYYAGPVNNPGLDVPQGEYQLL 141 (162)
T ss_dssp TTCEEEEEEECCCCEEECCSEEEEEE
T ss_pred CCeEEEEEEEeecCceecCCCcEEEE
Confidence 99 568899999999 6999999873
No 5
>3mtx_A Protein MD-1; LY86, RP105 associated protein, immune system; HET: PGT PGE; 2.00A {Gallus gallus} PDB: 3mu3_A*
Probab=99.47 E-value=2.4e-13 Score=92.47 Aligned_cols=94 Identities=18% Similarity=0.165 Sum_probs=85.1
Q ss_pred cceeecCCCCCccEEEEEEEEeCCCCCCCCceEEEEEEEecceecCcEEEEEEEECeEEecCCCCCCCCC-----CCCCC
Q 033390 21 IGVKYCDKKKNYAVTIQQVKIIPDPVVTGKPATFNISAVTGQAVYGGKVVINVAYFGVPVHQETRDVCEE-----VSCPI 95 (120)
Q Consensus 21 ~~~~~C~~~~~~~~~v~~v~i~P~p~~~G~~~~i~~~~~~~~~v~~g~~~v~~~~~gi~~~~~~~dlC~~-----~~CPl 95 (120)
+.++.|++-.+ .++++.||+-..|+++++++.+.+.+++....+++.++++++.++..+.++|.. +-||.
T Consensus 19 i~Y~~CD~~q~-----~~isi~pC~~~~~~~l~I~~~~IlR~dIkelY~~l~v~~~~~~ll~~~e~LCe~~~~~~sfC~~ 93 (151)
T 3mtx_A 19 IYYKSCDPQQD-----FAFSIDRCSDVTTHTFDIRAAMVLRQSIKELYAKVDLIINGKTVLSYSETLCGPGLSKLIFCGK 93 (151)
T ss_dssp EEEEECCTTCC-----CEEEESCGGGGGGTEEEEEEEEECCSCCSSEEEEEEEEETTEEEEEEEEEEESTTCCCSTTTTC
T ss_pred EEEEecCCccC-----cEEEcccCccccCCcEEEEEEEEEhhhhheeEEEEEEEECcEeeeecccccccCCCCcccccCc
Confidence 56889986532 488999999999999999999999999999888999999999999999999996 47999
Q ss_pred CCC-cEEEEEEEecCC-CCCCeeEEe
Q 033390 96 AAG-DFVLSHTQTLPS-FTPPVRLLH 119 (120)
Q Consensus 96 ~~G-~~~~~~s~~iP~-~~P~g~y~~ 119 (120)
.+| ++.++..+.+|. .+|+|+|++
T Consensus 94 ~KGE~i~~~~~v~~pg~~~p~G~Y~v 119 (151)
T 3mtx_A 94 KKGEHLYYEGPITLGIKEIPQRDYTI 119 (151)
T ss_dssp CTTCEEEEEEEEECCCSSCCCEEEEE
T ss_pred cCCeeEEEEEEeecCceecCCCcEEE
Confidence 999 568999999999 899999987
No 6
>3vq2_C Lymphocyte antigen 96; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_C* 2z64_C*
Probab=99.23 E-value=8.8e-11 Score=79.51 Aligned_cols=96 Identities=13% Similarity=0.149 Sum_probs=84.6
Q ss_pred ccceeecCCCCCccEEEEEEEEeCCCCCCCCceEEEEEEEecceecCcEEEEEEEECeEEecCCCCCCCCC-----CCCC
Q 033390 20 AIGVKYCDKKKNYAVTIQQVKIIPDPVVTGKPATFNISAVTGQAVYGGKVVINVAYFGVPVHQETRDVCEE-----VSCP 94 (120)
Q Consensus 20 ~~~~~~C~~~~~~~~~v~~v~i~P~p~~~G~~~~i~~~~~~~~~v~~g~~~v~~~~~gi~~~~~~~dlC~~-----~~CP 94 (120)
.+.+++|++... . .++++.||...+|.+..+++.+.+.+|+.+...++.+..+++.+|..+..+|.. .-||
T Consensus 15 eV~Y~~CD~~q~-~---~~isvdpC~~~~gs~~~l~~~~IpR~Dik~Ly~~~~l~~~~~~lp~~~e~iC~g~~~~ySfCg 90 (144)
T 3vq2_C 15 IISYSYCDHLKF-P---ISISSEPCIRLRGTNGFVHVEFIPRGNLKYLYFNLFISVNSIELPKRKEVLCHGHDDDYSFCR 90 (144)
T ss_dssp EEEEEEBTTBCC-C---EEEEEESCCCTTCEEEEEEEEECCSSCCTTEEEEEEEEETTEECCCEEEESCCSSSCSSGGGG
T ss_pred EEEEEeCCCccC-C---cEEeccccccccCCCcEEEEEEEEcCcceeEEEEEEEeecccccccCccCcccCCCCcceecc
Confidence 367999997531 3 466999999999999999999999999998888888888999999988899996 3799
Q ss_pred CCCC-cEEEEEEEecCCC-CCCeeEEe
Q 033390 95 IAAG-DFVLSHTQTLPSF-TPPVRLLH 119 (120)
Q Consensus 95 l~~G-~~~~~~s~~iP~~-~P~g~y~~ 119 (120)
..+| ++.++..+.+|.+ +|.|+|++
T Consensus 91 ~~KGE~i~~~~~~~~~~~~fpkG~Y~~ 117 (144)
T 3vq2_C 91 ALKGETVNTSIPFSFEGILFPKGHYRC 117 (144)
T ss_dssp CCTTCCEEEEEEEEECCCCCCSSEEEE
T ss_pred cccCcEEEEEEEeecCcEEccCCcEEE
Confidence 9999 7999999999998 99999986
No 7
>2e56_A Lymphocyte antigen 96; innate immunity, lipid-binding, lipid binding protein; HET: NAG MYR; 2.00A {Homo sapiens} PDB: 2e59_A* 3fxi_C* 3ula_B* 2z65_C*
Probab=98.22 E-value=1.5e-05 Score=53.45 Aligned_cols=95 Identities=12% Similarity=0.164 Sum_probs=81.7
Q ss_pred cceeecCCCCCccEEEEEEEEeCCCCCCCCceEEEEEEEecceecCcEEEEEEEECeEEecCCCCCCCCC-----CCCCC
Q 033390 21 IGVKYCDKKKNYAVTIQQVKIIPDPVVTGKPATFNISAVTGQAVYGGKVVINVAYFGVPVHQETRDVCEE-----VSCPI 95 (120)
Q Consensus 21 ~~~~~C~~~~~~~~~v~~v~i~P~p~~~G~~~~i~~~~~~~~~v~~g~~~v~~~~~gi~~~~~~~dlC~~-----~~CPl 95 (120)
+.++.|++-.. --++++.||.-.+|.+..+++...+-+|+.....++.+...|+.++..+.-+|.. .=|=-
T Consensus 16 i~Y~sCD~~q~----~~sin~~pC~~~~~~~~~l~~~~IpR~Dik~Ly~nl~l~~~~~~~~~~ke~iC~g~dd~ySFC~~ 91 (144)
T 2e56_A 16 ISYTYCDKMQY----PISINVNPCIELKGSKGLLHIFYIPRRDLKQLYFNLYITVNTMNLPKRKEVICRGSDDDYSFCRA 91 (144)
T ss_dssp EEEEECSSCCS----CCEEEEESCCCTTCEEEEEEEEECCSSCCTTCEEEEEEEETTEECCCEEEECSCSSSSSCGGGGC
T ss_pred EEEeecCcccC----CcEeccchhhhhccCceEEEEEEEEhhHHHHHhhhheeeeccccccccccccccCCCCCceeecc
Confidence 56889997531 2478999999999999999999999999999999999999999999988889986 36999
Q ss_pred CCC-cEEEEEEEecCC-CCCCeeEEe
Q 033390 96 AAG-DFVLSHTQTLPS-FTPPVRLLH 119 (120)
Q Consensus 96 ~~G-~~~~~~s~~iP~-~~P~g~y~~ 119 (120)
.+| +..++..+..+. .+|+|.|++
T Consensus 92 lKGEti~t~~p~s~~g~~fpkG~Y~~ 117 (144)
T 2e56_A 92 LKGETVNTTISFSFKGIKFSKGKYKC 117 (144)
T ss_dssp CTTCCEEEEEEEEECCCTTCCSEEEE
T ss_pred ccCceEEEeeecccCcEecCCCcEEE
Confidence 999 677777777775 699999986
No 8
>2r5o_A Putative ATP binding component of ABC- transporter; immunoglobulin fold, carbohydrate binding, domain swapping, O antigen export; HET: PG4; 1.30A {Escherichia coli}
Probab=93.42 E-value=0.34 Score=33.28 Aligned_cols=85 Identities=13% Similarity=0.054 Sum_probs=51.2
Q ss_pred cEEEEEEEEeC------CCCCCCCceEEEEEEEecceecCcEEEEEEEEC-eEEecCCCC-CCCCCCCCC-CCCCcE-EE
Q 033390 33 AVTIQQVKIIP------DPVVTGKPATFNISAVTGQAVYGGKVVINVAYF-GVPVHQETR-DVCEEVSCP-IAAGDF-VL 102 (120)
Q Consensus 33 ~~~v~~v~i~P------~p~~~G~~~~i~~~~~~~~~v~~g~~~v~~~~~-gi~~~~~~~-dlC~~~~CP-l~~G~~-~~ 102 (120)
.++|.++.+.- ..+..|+++++.+.+.+.+++.+..+-+.++-. |..+..... ..-....=+ +++|.. +.
T Consensus 47 ~a~I~~v~l~d~~G~~~~~~~~Ge~v~l~i~~~~~~~i~~~v~G~~Ik~~~G~~I~g~nT~~~~~~~~~~~~~~G~~~~v 126 (188)
T 2r5o_A 47 GAKIIDYHIQSAGVDFPPSLTGNQQTDFLMKVVFEYDFDCVVPGILIKTLDGLFLYGTNSFLASEGRENISVSRGDVRVF 126 (188)
T ss_dssp SEEEEEEEEEETTEESCSSEETTCEEEEEEEEEESSCEEEEEEEEEEEETTCCEEEEEEHHHHTTTCCCEEECTTCEEEE
T ss_pred cEEEEEEEEEECCCCEeeEEeCCCEEEEEEEEEECCcCCccEEEEEEECCCCCEEEecCcccccccccccccCCCCEEEE
Confidence 78899999863 347889999999999999999888766655543 444332110 000000001 356642 44
Q ss_pred EEEEecCCCCCCeeEEe
Q 033390 103 SHTQTLPSFTPPVRLLH 119 (120)
Q Consensus 103 ~~s~~iP~~~P~g~y~~ 119 (120)
.+.+.+ .+.+|.|.+
T Consensus 127 ~f~f~l--~L~~G~Y~l 141 (188)
T 2r5o_A 127 KFSLPV--DLNSGDYLL 141 (188)
T ss_dssp EEEEEC--CBCSEEEEE
T ss_pred EEEEec--ccCCCeEEE
Confidence 444443 466677765
No 9
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=91.63 E-value=1.2 Score=29.05 Aligned_cols=74 Identities=19% Similarity=0.156 Sum_probs=50.5
Q ss_pred cEEEEEEEEeCCCCCCCCceEEEEEEEecceecCcEEEEEEEECeEEecCCCCCCCCCCCCCCCCC-cEEEEEEEecCCC
Q 033390 33 AVTIQQVKIIPDPVVTGKPATFNISAVTGQAVYGGKVVINVAYFGVPVHQETRDVCEEVSCPIAAG-DFVLSHTQTLPSF 111 (120)
Q Consensus 33 ~~~v~~v~i~P~p~~~G~~~~i~~~~~~~~~v~~g~~~v~~~~~gi~~~~~~~dlC~~~~CPl~~G-~~~~~~s~~iP~~ 111 (120)
.+.+ +++ .|..++.|+.+++++...-......+...|.++.+|..+-.. .-.|.+| .-+++++.. |
T Consensus 18 DL~V-~is-~P~~v~~G~~~ti~vtV~N~G~~~a~~~~V~lyvng~~v~t~--------~v~La~G~s~tv~f~~~-~-- 84 (127)
T 3idu_A 18 DLTV-EIK-GPDVVGVNKLAEYEVHVKNLGGIGVPSTKVRVYINGTLYKNW--------TVSLGPKEEKVLTFNWT-P-- 84 (127)
T ss_dssp CEEE-EEE-SCSEECTTCCEEEEEEEEECSSSCEEEEEEEEEETTEEEEEE--------EEEECTTCEEEEEEEEC-C--
T ss_pred CeEE-Eec-CCCcccCCCEEEEEEEEEECCCCccCCcEEEEEECCEEEeeE--------EeccCCCCeEEEEEEEE-c--
Confidence 5566 665 788899999999999988777777677788888888643322 2257888 334444433 2
Q ss_pred CCCeeEEe
Q 033390 112 TPPVRLLH 119 (120)
Q Consensus 112 ~P~g~y~~ 119 (120)
..+|.|++
T Consensus 85 ~~~G~~~v 92 (127)
T 3idu_A 85 TQEGMYRI 92 (127)
T ss_dssp SSCEEEEE
T ss_pred CCCcEEEE
Confidence 23788775
No 10
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=88.24 E-value=0.67 Score=36.78 Aligned_cols=14 Identities=21% Similarity=0.387 Sum_probs=11.0
Q ss_pred CccEEEEEEEEeCC
Q 033390 31 NYAVTIQQVKIIPD 44 (120)
Q Consensus 31 ~~~~~v~~v~i~P~ 44 (120)
.+.++|+..++.|+
T Consensus 25 ~~~l~i~~~~~~~d 38 (521)
T 1v10_A 25 ALDLHILNANLDPD 38 (521)
T ss_dssp EEEEEEEEEEECTT
T ss_pred eEEEEEEEEEEcCC
Confidence 35788888888886
No 11
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=87.10 E-value=0.76 Score=29.89 Aligned_cols=75 Identities=11% Similarity=0.033 Sum_probs=49.1
Q ss_pred EEEeCCCCCCCCceEEEEEEEecceecCcEEEEEEEECe-----EEecCCCCCCCCCCCCCCCCC-cEEEEEEEecCCCC
Q 033390 39 VKIIPDPVVTGKPATFNISAVTGQAVYGGKVVINVAYFG-----VPVHQETRDVCEEVSCPIAAG-DFVLSHTQTLPSFT 112 (120)
Q Consensus 39 v~i~P~p~~~G~~~~i~~~~~~~~~v~~g~~~v~~~~~g-----i~~~~~~~dlC~~~~CPl~~G-~~~~~~s~~iP~~~ 112 (120)
++.+|-.+..|+.++|++.-.-.....++...|.+++++ ..+-.. .-=+|.+| .-+++++..++...
T Consensus 5 is~sP~~p~~g~~vTvsatVkN~Gt~~s~a~~V~~yl~~p~~gg~~vgt~-------tv~~LaaG~s~t~~v~~~~~~~~ 77 (122)
T 2kut_A 5 ITLSKETPFEGEEITVSARVTNRGAAEAHNVPVAVYLGNPAQGGVEIGRD-------TISRIPVGGTGLARVQWKATRKL 77 (122)
T ss_dssp EECCTTSCCTTCEEEEEEEEECCSSSCBCCCCEEECSSCTTTCCCCCBCC-------CCSCBCTTCEEECCEEEECCCCC
T ss_pred eecCCCCCCCCCeEEEEEEEEeCCCcccCcEEEEEEeCCCccCCeEEeeE-------EccccCCCCeEEEEEEEecCCcc
Confidence 577898899999999999877666666665566666666 111111 13478999 45555666676431
Q ss_pred ----CCeeEEeC
Q 033390 113 ----PPVRLLHT 120 (120)
Q Consensus 113 ----P~g~y~~~ 120 (120)
-.|.|++.
T Consensus 78 ~~~a~~Gsy~v~ 89 (122)
T 2kut_A 78 AGRAANPGVPVY 89 (122)
T ss_dssp SSCCSCCCCCCC
T ss_pred cccccCceEEEE
Confidence 23888763
No 12
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=86.86 E-value=4.4 Score=25.83 Aligned_cols=45 Identities=11% Similarity=0.072 Sum_probs=35.7
Q ss_pred cEEEEEEEEeCCCCCCCCceEEEEEEEecceecCcEEEEEEEECeEE
Q 033390 33 AVTIQQVKIIPDPVVTGKPATFNISAVTGQAVYGGKVVINVAYFGVP 79 (120)
Q Consensus 33 ~~~v~~v~i~P~p~~~G~~~~i~~~~~~~~~v~~g~~~v~~~~~gi~ 79 (120)
.+.+.++ +|-.+..|+.++|++...-.....++...+..+++|-.
T Consensus 4 DL~vt~i--tP~~~~~~~~~ti~atVkN~G~~~a~~~~V~ly~~g~~ 48 (114)
T 2l0d_A 4 DLVPVSL--TPVTVVPNTVNTMTATIENQGNKDSTSFNVSLLVDGIV 48 (114)
T ss_dssp CEEEEEE--ECSEECTTSEEEEEEEEEECSSSCBCCEEEEEEETTEE
T ss_pred CcEEEec--cCCCcCCCCeEEEEEEEEECCCCCCCCEEEEEEECCEE
Confidence 4567776 68778899999999988877777777778888888853
No 13
>1roc_A Anti-silencing protein 1; beta-sandwich, replication, chaperone; 1.50A {Saccharomyces cerevisiae} SCOP: b.1.22.1 PDB: 2ygv_A
Probab=82.43 E-value=3.3 Score=28.01 Aligned_cols=77 Identities=17% Similarity=0.307 Sum_probs=53.4
Q ss_pred cEEEEEEEEeCCCCCCCCceEEEEEEEecceecCcEEEEEEEECeEEecCCCCCCCCC-----CCCCCCCCcEEEEEEEe
Q 033390 33 AVTIQQVKIIPDPVVTGKPATFNISAVTGQAVYGGKVVINVAYFGVPVHQETRDVCEE-----VSCPIAAGDFVLSHTQT 107 (120)
Q Consensus 33 ~~~v~~v~i~P~p~~~G~~~~i~~~~~~~~~v~~g~~~v~~~~~gi~~~~~~~dlC~~-----~~CPl~~G~~~~~~s~~ 107 (120)
.+++++|.+-.+|-+-..++.++++|..-+++.+. ++..+.|=|-. ..+--|. .--|++.|.+.|.++..
T Consensus 4 ~V~i~~V~vl~np~~f~~p~~feI~fEc~e~L~~d-lewkliYVgSa----~s~~~DQ~Ld~v~vGPi~~G~~kFv~~ad 78 (155)
T 1roc_A 4 IVSLLGIKVLNNPAKFTDPYEFEITFECLESLKHD-LEWKLTYVGSS----RSLDHDQELDSILVGPVPVGVNKFVFSAD 78 (155)
T ss_dssp SEEEEEEEECSCSEETTSCEEEEEEEEECSCCSSC-EEEEEEECCCT----TSSCTTEEEEEEEECSCCSEEEEEEEEEC
T ss_pred EEEEEEEEEeCCchhcCCCeEEEEEEEEcccCCCC-cEEEEEEEeCC----CcccCceEeeEEEeccccceeEEEEEEcC
Confidence 68999999999998889999999999999988877 33333332221 1122222 25799999777777766
Q ss_pred cCC--CCCC
Q 033390 108 LPS--FTPP 114 (120)
Q Consensus 108 iP~--~~P~ 114 (120)
-|. .+|.
T Consensus 79 pPd~~~Ip~ 87 (155)
T 1roc_A 79 PPSAELIPA 87 (155)
T ss_dssp CCCGGGCCT
T ss_pred CCCcccCCh
Confidence 554 4554
No 14
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=79.85 E-value=8 Score=30.45 Aligned_cols=15 Identities=27% Similarity=0.417 Sum_probs=11.8
Q ss_pred CccEEEEEEEEeCCC
Q 033390 31 NYAVTIQQVKIIPDP 45 (120)
Q Consensus 31 ~~~~~v~~v~i~P~p 45 (120)
.+.++|++.++.|+-
T Consensus 6 ~~~l~i~~~~~~pdg 20 (495)
T 3t6v_A 6 VTDLHIVNADIVPDG 20 (495)
T ss_dssp EEEEEEEEEEECTTS
T ss_pred eEEEEEEEEEEcCCC
Confidence 357889999999863
No 15
>2i32_A Anti-silencing factor 1 paralog A; histone deposition, chromatin regulation, histone chaperones, ASF1, HIRA, CAF-1, replication chaperone; 2.70A {Homo sapiens} SCOP: b.1.22.1 PDB: 1tey_A 2iij_A 3aad_B
Probab=79.63 E-value=4.8 Score=27.89 Aligned_cols=78 Identities=17% Similarity=0.270 Sum_probs=52.7
Q ss_pred cEEEEEEEEeCCCCCCCCceEEEEEEEecceecCc-EEEEEEEECeEEecC--CCCCCCCCCCCCCCCCcEEEEEEEecC
Q 033390 33 AVTIQQVKIIPDPVVTGKPATFNISAVTGQAVYGG-KVVINVAYFGVPVHQ--ETRDVCEEVSCPIAAGDFVLSHTQTLP 109 (120)
Q Consensus 33 ~~~v~~v~i~P~p~~~G~~~~i~~~~~~~~~v~~g-~~~v~~~~~gi~~~~--~~~dlC~~~~CPl~~G~~~~~~s~~iP 109 (120)
.++|.+|++-.+|-.-..++.|+++|..-+++.+. .+++ ++.|.-.--. ...|-+ .--|++.|.+.|.++..-|
T Consensus 28 ~V~i~~V~VlnNp~~F~dP~~FeItfEcle~L~~dleWkl-iYVGSa~s~~~DQ~Ldsv--~VGPi~~G~~kFvfeadpP 104 (182)
T 2i32_A 28 KVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKI-IYVGSAESEEYDQVLDSV--LVGPVPAGRHMFVFQADAP 104 (182)
T ss_dssp SEEEEEEEECSCSEETTSCEEEEEEEEESSCCSSCEEEEE-EEESCSSCGGGEEEEEEE--EECCCCSEEEEEEEEECCC
T ss_pred EEEEEEEEEeCCchhcCCCeEEEEEEEEccccCCCcEEEE-EEEcCCCCccCCeEeeEE--EECCccceEEEEEEEeCCC
Confidence 78999999998888889999999999999988877 4554 2233211000 001111 2469999977777776655
Q ss_pred C--CCC
Q 033390 110 S--FTP 113 (120)
Q Consensus 110 ~--~~P 113 (120)
. .+|
T Consensus 105 d~~kIP 110 (182)
T 2i32_A 105 NPGLIP 110 (182)
T ss_dssp CGGGSC
T ss_pred CcccCC
Confidence 4 455
No 16
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=79.58 E-value=7.7 Score=30.62 Aligned_cols=13 Identities=31% Similarity=0.514 Sum_probs=10.8
Q ss_pred ccEEEEEEEEeCC
Q 033390 32 YAVTIQQVKIIPD 44 (120)
Q Consensus 32 ~~~~v~~v~i~P~ 44 (120)
+.++|++..+.|+
T Consensus 6 ~~l~v~~~~~~pd 18 (499)
T 3pxl_A 6 ADLTITDAAVSPD 18 (499)
T ss_dssp EEEEEEEEEECTT
T ss_pred EEEEEEEEEEcCC
Confidence 5788889999986
No 17
>2idc_A Anti-silencing protein 1 and histone H3 chimera; IG-like fold, ASF1, chaperone, chromatin, repli chaperone complex; 2.20A {Saccharomyces cerevisiae}
Probab=79.58 E-value=4.3 Score=28.09 Aligned_cols=73 Identities=16% Similarity=0.281 Sum_probs=50.6
Q ss_pred cEEEEEEEEeCCCCCCCCceEEEEEEEecceecCcEEEEEEEECeEEecCCCCCCCCC-----CCCCCCCCcEEEEEEEe
Q 033390 33 AVTIQQVKIIPDPVVTGKPATFNISAVTGQAVYGGKVVINVAYFGVPVHQETRDVCEE-----VSCPIAAGDFVLSHTQT 107 (120)
Q Consensus 33 ~~~v~~v~i~P~p~~~G~~~~i~~~~~~~~~v~~g~~~v~~~~~gi~~~~~~~dlC~~-----~~CPl~~G~~~~~~s~~ 107 (120)
.++|.+|.+-.+|-.-..++.|.++|..-+++.+. ++..+.|=|- ...+--|. .--|++.|.+.|.++..
T Consensus 5 ~V~l~~V~VlnNp~~f~dP~~FeI~fEcle~L~~d-leWkliYVgS----a~s~~~DQ~Ldsv~VGPi~~G~~kFv~~ad 79 (179)
T 2idc_A 5 IVSLLGIKVLNNPAKFTDPYEFEITFECLESLKHD-LEWKLTYVGS----SRSLDHDQELDSILVGPVPVGVNKFVFSAD 79 (179)
T ss_dssp SEEEEEEEEESCSEETTSCEEEEEEEEECSCCSSC-EEEEEEECSC----TTCGGGCEEEEEEEECSCCSEEEEEEEEEC
T ss_pred EEEEEEEEEeCCchhcCCCeEEEEEEEEcccCCCC-cEEEEEEEcC----CCcccCCeEeeEEEECCccceeEEEEEEcC
Confidence 68999999999998889999999999999988777 3333333221 11111121 24699999777777665
Q ss_pred cCC
Q 033390 108 LPS 110 (120)
Q Consensus 108 iP~ 110 (120)
-|.
T Consensus 80 pPd 82 (179)
T 2idc_A 80 PPS 82 (179)
T ss_dssp CCC
T ss_pred CCC
Confidence 554
No 18
>2cu9_A Spcia1, histone chaperone CIA1; immunoglobulin fold, structural genomics, NPPSFA; 1.80A {Schizosaccharomyces pombe} SCOP: b.1.22.1 PDB: 2dze_A* 2z34_A 2z3f_A
Probab=79.49 E-value=4.7 Score=27.39 Aligned_cols=76 Identities=16% Similarity=0.230 Sum_probs=52.8
Q ss_pred cEEEEEEEEeCCCCCCCCceEEEEEEEecceecCc-EEEEEEEECeEEecCCCCCCCCC-----CCCCCCCCcEEEEEEE
Q 033390 33 AVTIQQVKIIPDPVVTGKPATFNISAVTGQAVYGG-KVVINVAYFGVPVHQETRDVCEE-----VSCPIAAGDFVLSHTQ 106 (120)
Q Consensus 33 ~~~v~~v~i~P~p~~~G~~~~i~~~~~~~~~v~~g-~~~v~~~~~gi~~~~~~~dlC~~-----~~CPl~~G~~~~~~s~ 106 (120)
.++|.+|++-.+|-+-..++.++++|..-+++.+. .+++ ++.|.-. .+--|. .--|++.|.+.|.++.
T Consensus 3 ~V~i~~V~vlnnp~~f~~p~~feI~fEc~e~L~~dlewkl-iYVgSa~-----s~~~DQ~Ld~v~VGPi~~G~~kFv~~a 76 (161)
T 2cu9_A 3 IVNILSVNVLNNPAKFSDPYKFEITFECLEPLKSDLEWKL-TYVGSAT-----SQSYDQILDTLLVGPIPIGINKFVFEA 76 (161)
T ss_dssp SEEEEEEEESSCSEETTSCEEEEEEEEECSCCSSCEEEEE-EEESSTT-----SCCCEEEEEEEEECSCCSEEEEEEEEE
T ss_pred eEEEEEEEEeCCchhcCCCeEEEEEEEEcccCCCCeEEEE-EEEcCCC-----CccCCeEeeEEEECCccceEEEEEEEc
Confidence 57899999999888889999999999999988877 4544 2223211 111121 2569999977777776
Q ss_pred ecCC--CCCC
Q 033390 107 TLPS--FTPP 114 (120)
Q Consensus 107 ~iP~--~~P~ 114 (120)
.-|. .+|.
T Consensus 77 dpPd~~~IP~ 86 (161)
T 2cu9_A 77 DPPNIDLLPQ 86 (161)
T ss_dssp CCCCGGGSSC
T ss_pred CCCChhHCCC
Confidence 6654 4554
No 19
>2hue_A Anti-silencing protein 1; mini beta sheet, elongated beta sandwhich, DNA binding prote; 1.70A {Saccharomyces cerevisiae} SCOP: b.1.22.1 PDB: 1wg3_A
Probab=77.85 E-value=5.5 Score=27.42 Aligned_cols=75 Identities=15% Similarity=0.180 Sum_probs=50.8
Q ss_pred cEEEEEEEEeCCCCCCCCceEEEEEEEecceecCc-EEEEEEEECeEEecC--CCCCCCCCCCCCCCCCcEEEEEEEecC
Q 033390 33 AVTIQQVKIIPDPVVTGKPATFNISAVTGQAVYGG-KVVINVAYFGVPVHQ--ETRDVCEEVSCPIAAGDFVLSHTQTLP 109 (120)
Q Consensus 33 ~~~v~~v~i~P~p~~~G~~~~i~~~~~~~~~v~~g-~~~v~~~~~gi~~~~--~~~dlC~~~~CPl~~G~~~~~~s~~iP 109 (120)
.++|.+|.+-.+|-+-..++.++++|..-+++.+. .+++ ++.|.-.--. ...|-+ .--|++.|.+.|.++..-|
T Consensus 9 ~V~l~~V~VlnNp~~f~dP~~FeI~fEcle~L~~dleWkl-iYVgSa~s~~~DQ~Ld~v--~VGPi~~G~~kFv~~adpP 85 (175)
T 2hue_A 9 IVSLLGIKVLNNPAKFTDPYEFEITFECLESLKHDLEWKL-TYVGSSRSLDHDQELDSI--LVGPVPVGVNKFVFSADPP 85 (175)
T ss_dssp SEEEEEEEECSCSEETTSCEEEEEEEEECSCCSSCEEEEE-EEESCTTCGGGEEEEEEE--EECSCCSEEEEEEEEECCC
T ss_pred EEEEEEEEEeCCchhcCCCeEEEEEEEEcccCCCCcEEEE-EEEcCCCCccCCeEeeEE--EECCccceeEEEEEEcCCC
Confidence 78999999999988889999999999999988877 3443 2222211000 001111 2469999977777776655
Q ss_pred C
Q 033390 110 S 110 (120)
Q Consensus 110 ~ 110 (120)
.
T Consensus 86 d 86 (175)
T 2hue_A 86 S 86 (175)
T ss_dssp C
T ss_pred C
Confidence 4
No 20
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=77.42 E-value=5.6 Score=32.16 Aligned_cols=22 Identities=23% Similarity=0.431 Sum_probs=14.6
Q ss_pred CCCCCCCC-cEEEEEEEecCCCCCCeeE
Q 033390 91 VSCPIAAG-DFVLSHTQTLPSFTPPVRL 117 (120)
Q Consensus 91 ~~CPl~~G-~~~~~~s~~iP~~~P~g~y 117 (120)
+.||++|| +|+|+++ ++ .+|.|
T Consensus 143 Tq~pI~PG~sftY~f~--~~---q~GT~ 165 (580)
T 3sqr_A 143 TQCPIAPGDTLTYKFQ--VT---QYGTT 165 (580)
T ss_dssp TBCCBCTTCEEEEEEE--CC---CCEEE
T ss_pred ccCCCCCCCeEEEEEE--CC---CCcce
Confidence 47999999 4555554 43 35765
No 21
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=76.46 E-value=12 Score=29.72 Aligned_cols=22 Identities=27% Similarity=0.591 Sum_probs=14.6
Q ss_pred CCCCCCCC-cEEEEEEEecCCCCCCeeE
Q 033390 91 VSCPIAAG-DFVLSHTQTLPSFTPPVRL 117 (120)
Q Consensus 91 ~~CPl~~G-~~~~~~s~~iP~~~P~g~y 117 (120)
+.||+.|| +|+|.++ + -++|.|
T Consensus 79 tq~~I~PG~s~tY~f~--~---~~~GT~ 101 (552)
T 1aoz_A 79 SQCAINPGETFFYNFT--V---DNPGTF 101 (552)
T ss_dssp TBCCBCTTCEEEEEEE--C---CSCEEE
T ss_pred ccCCcCCCCeEEEEEE--C---CCCEEE
Confidence 57999999 4665554 3 246655
No 22
>2io5_A ASF1A protein; chaperone, chaperone-structural protein complex; 2.70A {Homo sapiens} SCOP: b.1.22.1
Probab=75.89 E-value=6.1 Score=27.21 Aligned_cols=75 Identities=16% Similarity=0.284 Sum_probs=52.3
Q ss_pred cEEEEEEEEeCCCCCCCCceEEEEEEEecceecCc-EEEEEEEECeEEecCCCCCCCCC-----CCCCCCCCcEEEEEEE
Q 033390 33 AVTIQQVKIIPDPVVTGKPATFNISAVTGQAVYGG-KVVINVAYFGVPVHQETRDVCEE-----VSCPIAAGDFVLSHTQ 106 (120)
Q Consensus 33 ~~~v~~v~i~P~p~~~G~~~~i~~~~~~~~~v~~g-~~~v~~~~~gi~~~~~~~dlC~~-----~~CPl~~G~~~~~~s~ 106 (120)
.++|.+|++-.+|-.-..++.|.++|..-+++.+. .+++ ++.|.- ..+--|. .--|++.|.+.|.++.
T Consensus 6 ~V~l~~V~vlnNp~~f~~P~~FeI~fEc~e~L~~dleWkl-iYVgSa-----~s~~~DQ~Ld~v~VGPi~~G~~kFv~~a 79 (175)
T 2io5_A 6 KVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKI-IYVGSA-----ESEEYDQVLDSVLVGPVPAGRHMFVFQA 79 (175)
T ss_dssp CEEEEEEEECSCSEETTSCEEEEEEEEESSCCCSCEEEEE-EEECCT-----TCGGGEEEEEEEEECSCCSEEEEEEEEE
T ss_pred EEEEEEEEEeCCccccCCCeEEEEEEEeccccCCCcEEEE-EEEcCC-----CCccCCeEeeEEEECCccceEEEEEEEe
Confidence 68999999998888888999999999999988877 4554 222321 1111121 2469999977777776
Q ss_pred ecCC--CCC
Q 033390 107 TLPS--FTP 113 (120)
Q Consensus 107 ~iP~--~~P 113 (120)
.-|. .+|
T Consensus 80 dpPd~~~IP 88 (175)
T 2io5_A 80 DAPNPGLIP 88 (175)
T ss_dssp CCCCGGGSC
T ss_pred CCCChhhCC
Confidence 6554 355
No 23
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=75.71 E-value=5.4 Score=33.08 Aligned_cols=74 Identities=16% Similarity=0.146 Sum_probs=41.7
Q ss_pred CCCCCCceEEEEEEEecceecCc--EEEEEEEECeE-----------EecCCCCCCCCCCCCCCCCCcEEEEEEEecCCC
Q 033390 45 PVVTGKPATFNISAVTGQAVYGG--KVVINVAYFGV-----------PVHQETRDVCEEVSCPIAAGDFVLSHTQTLPSF 111 (120)
Q Consensus 45 p~~~G~~~~i~~~~~~~~~v~~g--~~~v~~~~~gi-----------~~~~~~~dlC~~~~CPl~~G~~~~~~s~~iP~~ 111 (120)
.++|||.+++.+.|. ++..... .+.+.+..|-- ++-....+.|=.... .....-.++.++..|..
T Consensus 32 ivRRGQ~F~i~l~f~-~r~~~~~~d~l~l~~~~Gp~Ps~~~gT~~~~~l~~~~~~~~W~a~~-~~~~~~~~~vsv~spa~ 109 (687)
T 2q3z_A 32 VVRRGQPFWLTLHFE-GRNYQASVDSLTFSVVTGPAPSQEAGTKARFPLRDAVEEGDWTATV-VDQQDCTLSLQLTTPAN 109 (687)
T ss_dssp EEETTSCEEEEEEES-SSCCCTTTEEEEEEEEESSSCCTTTTSEEEEEBCSCCCTTSCEEEE-EEECSSEEEEEEECCTT
T ss_pred EEcCCCcEEEEEEec-CCCCCCcccEEEEEEEeCCCCCccCCeEEEEEeccCCCCCceEEEE-EecCCCEEEEEEeCCCC
Confidence 478999999999882 2333333 56666666531 222221111110000 01111257788899999
Q ss_pred CCCeeEEeC
Q 033390 112 TPPVRLLHT 120 (120)
Q Consensus 112 ~P~g~y~~~ 120 (120)
+|-|+|+++
T Consensus 110 A~VG~y~L~ 118 (687)
T 2q3z_A 110 APIGLYRLS 118 (687)
T ss_dssp CCCEEEEEE
T ss_pred CeEEEEEEE
Confidence 999999863
No 24
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=74.61 E-value=2.7 Score=27.14 Aligned_cols=72 Identities=11% Similarity=0.068 Sum_probs=38.6
Q ss_pred CCCceEEEEEEEecc------eecCc-EEEEEEEE-CeEEecCCCCCCCCC---CCCCCCCCcEEEEEEEecCCCCCCee
Q 033390 48 TGKPATFNISAVTGQ------AVYGG-KVVINVAY-FGVPVHQETRDVCEE---VSCPIAAGDFVLSHTQTLPSFTPPVR 116 (120)
Q Consensus 48 ~G~~~~i~~~~~~~~------~v~~g-~~~v~~~~-~gi~~~~~~~dlC~~---~~CPl~~G~~~~~~s~~iP~~~P~g~ 116 (120)
.|+.+.+.+.-+-.. +..+| ..++.++- .|-.+..-..+-|=. ..=-++||+ +.+++.++|...++|.
T Consensus 16 ~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE-~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGE-TYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTC-EEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCC-EEEEEEEeCCCCCCcc
Confidence 455555555444222 12344 34555543 444455333344432 123578895 4555666777788999
Q ss_pred EEeC
Q 033390 117 LLHT 120 (120)
Q Consensus 117 y~~~ 120 (120)
|++.
T Consensus 95 Ytl~ 98 (120)
T 3isy_A 95 YEVK 98 (120)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9873
No 25
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=74.37 E-value=4.1 Score=26.22 Aligned_cols=33 Identities=18% Similarity=0.187 Sum_probs=27.7
Q ss_pred CCCCCCCCceEEEEEEEecceecCcE-EEEEEEE
Q 033390 43 PDPVVTGKPATFNISAVTGQAVYGGK-VVINVAY 75 (120)
Q Consensus 43 P~p~~~G~~~~i~~~~~~~~~v~~g~-~~v~~~~ 75 (120)
.||++.|+.++.+.++.+......++ ++++..+
T Consensus 77 ~CPl~~G~~~~y~~~~~v~~~~P~v~~~~v~~~L 110 (129)
T 1xwv_A 77 KCPLVKGQQYDAKYTWNVPKIAPKSENVVVTVKL 110 (129)
T ss_dssp CSSBCTTCEEEEEEEEECCTTSCCBSCEEEEEEE
T ss_pred cCcccCCEEEEEEEEeEecccCCCCceEEEEEEE
Confidence 58999999999999999888888777 7666655
No 26
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=72.21 E-value=6 Score=25.42 Aligned_cols=33 Identities=15% Similarity=0.067 Sum_probs=26.7
Q ss_pred CCCCCCCCceEEEEEEEecceecCcEEEEEEEE
Q 033390 43 PDPVVTGKPATFNISAVTGQAVYGGKVVINVAY 75 (120)
Q Consensus 43 P~p~~~G~~~~i~~~~~~~~~v~~g~~~v~~~~ 75 (120)
.||++.|+.++.+.++........++++++..+
T Consensus 79 ~CPl~~G~~~~y~~~lpV~~~~P~~~~~v~~~L 111 (130)
T 1nep_A 79 RCPIEKDKTYNYVNKLPVKNEYPSIKVVVEWEL 111 (130)
T ss_dssp CSSBCTTCEEEEEEEEECCTTSCSSEEEEEEEE
T ss_pred cCcccCCcEEEEEEEeEecccCCCccEEEEEEE
Confidence 689999999999988887777777777666555
No 27
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=71.36 E-value=7.4 Score=32.29 Aligned_cols=71 Identities=11% Similarity=0.025 Sum_probs=41.1
Q ss_pred CCCCCCceEEEEEEEecceecCc-EEEEEEEECeE-----------EecCCCCCCCCCCCCCCCCCcEEEEEEEecCCCC
Q 033390 45 PVVTGKPATFNISAVTGQAVYGG-KVVINVAYFGV-----------PVHQETRDVCEEVSCPIAAGDFVLSHTQTLPSFT 112 (120)
Q Consensus 45 p~~~G~~~~i~~~~~~~~~v~~g-~~~v~~~~~gi-----------~~~~~~~dlC~~~~CPl~~G~~~~~~s~~iP~~~ 112 (120)
.++|||.+++.+.| ++..... .+.+.+..|-- ++... .+.|=.... .....-+++.++..|..+
T Consensus 30 IVRRGQ~F~i~l~f--~r~~~~~d~l~l~~~tGp~Ps~~~gT~~~~~l~~~-~~~~W~a~~-~~~~~~~~tvsv~spa~A 105 (692)
T 1vjj_A 30 ILRRGQNFQVLMIM--NKGLGSNERLEFIVSTGPYPSESAMTKAVFPLSNG-SSGGWSAVL-QASNGNTLTISISSPASA 105 (692)
T ss_dssp EEETTSCEEEEEEE--SSCCCTTCEEEEEEECSSSCCTTTTSEEEEEEESS-CCSSSEEEE-EEEETTEEEEEEECCTTC
T ss_pred EEcCCCcEEEEEEE--CCCCCCCceEEEEEEeCCCCCcCCCeEEEEEecCC-CCCceEEEE-EecCCCEEEEEEeCCCCC
Confidence 47899999999988 4555544 56666655431 22111 110000000 011112677888899999
Q ss_pred CCeeEEe
Q 033390 113 PPVRLLH 119 (120)
Q Consensus 113 P~g~y~~ 119 (120)
|-|+|++
T Consensus 106 ~VG~Y~L 112 (692)
T 1vjj_A 106 PIGRYTM 112 (692)
T ss_dssp CCEEEEE
T ss_pred eEEEEEE
Confidence 9999986
No 28
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=68.93 E-value=4.3 Score=29.84 Aligned_cols=25 Identities=12% Similarity=0.252 Sum_probs=17.8
Q ss_pred CCCCCCCCCCCCC-cEEEEEEEecCC
Q 033390 86 DVCEEVSCPIAAG-DFVLSHTQTLPS 110 (120)
Q Consensus 86 dlC~~~~CPl~~G-~~~~~~s~~iP~ 110 (120)
|.=....||+.|| +|+|+++...|.
T Consensus 78 dG~~~~~~~i~PG~~~~Y~~~~~~P~ 103 (313)
T 3tas_A 78 DGTKQSRSDVEPGGTRTYTWRTHVPG 103 (313)
T ss_dssp SCSTTTTCCBCTTCEEEEEEBCCCCE
T ss_pred CCCccccCCcCCCCEEEEEEEeccCC
Confidence 4333468999999 678777777663
No 29
>3m7o_A Lymphocyte antigen 86; beta sheet, glycoprotein, immunity, inflammatory response, I immunity, secreted, immune system; HET: NAG L9R NDG; 1.65A {Mus musculus} PDB: 3t6q_C* 3b2d_C* 3rg1_C*
Probab=67.83 E-value=6.4 Score=26.76 Aligned_cols=33 Identities=9% Similarity=-0.069 Sum_probs=27.4
Q ss_pred eCCCCCCCCceEEEEEEEecc-eecCcEEEEEEE
Q 033390 42 IPDPVVTGKPATFNISAVTGQ-AVYGGKVVINVA 74 (120)
Q Consensus 42 ~P~p~~~G~~~~i~~~~~~~~-~v~~g~~~v~~~ 74 (120)
+-||.++|+.++..+.++..+ ++..|+..+.+.
T Consensus 110 sfCp~~KGE~v~~~~~v~~p~~e~P~G~Y~v~ae 143 (162)
T 3m7o_A 110 SFCGRRKGEQIYYAGPVNNPGLDVPQGEYQLLLE 143 (162)
T ss_dssp SSTTCCTTCEEEEEEECCCCEEECCSEEEEEEEE
T ss_pred ccCCcCCCeEEEEEEEeecCceecCCCcEEEEEE
Confidence 349999999999999999998 799997655444
No 30
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=67.44 E-value=4.8 Score=33.59 Aligned_cols=72 Identities=8% Similarity=-0.087 Sum_probs=41.9
Q ss_pred CCCCCCceEEEEEEEecceecCc--EEEEEEEECe-----------EEecCCCCCCCCCCCCCCCCCcEEEEEEEecCCC
Q 033390 45 PVVTGKPATFNISAVTGQAVYGG--KVVINVAYFG-----------VPVHQETRDVCEEVSCPIAAGDFVLSHTQTLPSF 111 (120)
Q Consensus 45 p~~~G~~~~i~~~~~~~~~v~~g--~~~v~~~~~g-----------i~~~~~~~dlC~~~~CPl~~G~~~~~~s~~iP~~ 111 (120)
.++|||.+++.+.|. +..... .+.+.+..|- +++.....+.|=....=-+.| -+++.++..|..
T Consensus 75 IVRRGQ~F~i~l~f~--r~~~~~~d~l~l~~~tGp~Ps~~~gT~~~~~l~~~~~~~~W~A~~~~~~~-~~~tvsv~spa~ 151 (731)
T 1ex0_A 75 IVRRGQSFYVQIDFS--RPYDPRRDLFRVEYVIGRYPQENKGTYIPVPIVSELQSGKWGAKIVMRED-RSVRLSIQSSPK 151 (731)
T ss_dssp EEETTSEEEEEEEES--SCCCTTTCCEEEEEECBSSCCGGGTSEEEECEESSCCTTSCEEEEEEEET-TEEEEEEECCTT
T ss_pred EEcCCCcEEEEEEeC--CCCCCCCcEEEEEEEeCCCCCccCCcEEEEEeccCCCCCceEEEEEecCC-CEEEEEEecCCC
Confidence 489999999999884 555532 4666666553 122222211111000000112 257788889999
Q ss_pred CCCeeEEe
Q 033390 112 TPPVRLLH 119 (120)
Q Consensus 112 ~P~g~y~~ 119 (120)
+|-|+|++
T Consensus 152 A~VG~Y~L 159 (731)
T 1ex0_A 152 CIVGKFRM 159 (731)
T ss_dssp CCCEEEEE
T ss_pred CeEEEEEE
Confidence 99999986
No 31
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=67.18 E-value=8.9 Score=28.42 Aligned_cols=22 Identities=27% Similarity=0.356 Sum_probs=14.8
Q ss_pred CCCCCCCCc-EEEEEEEecCCCCCCeeE
Q 033390 91 VSCPIAAGD-FVLSHTQTLPSFTPPVRL 117 (120)
Q Consensus 91 ~~CPl~~G~-~~~~~s~~iP~~~P~g~y 117 (120)
+.||+.||+ |+|.++ ++ ++|.|
T Consensus 79 tq~~I~PG~~~~y~f~--~~---~~Gt~ 101 (339)
T 2zwn_A 79 TQQPIEAGDSYTYKFK--AD---RIGTL 101 (339)
T ss_dssp TBCCBCTTCEEEEEEE--CC---SCEEE
T ss_pred ccCccCCCCeEEEEEE--CC---CCEEE
Confidence 469999994 555544 44 46776
No 32
>4f27_A Clumping factor B; DEV-IGG fold, protein-peptide complex, fibronogen, cell SURF adhesion-blood clotting complex; 1.92A {Staphylococcus aureus} PDB: 4f20_A 4f24_A 4f1z_A 3au0_A 3at0_A 3asw_A
Probab=66.73 E-value=17 Score=26.76 Aligned_cols=42 Identities=12% Similarity=0.019 Sum_probs=33.4
Q ss_pred ccEEEEEEEEeCCC--CCCCCceEEEEEEEecceecCc-EEEEEE
Q 033390 32 YAVTIQQVKIIPDP--VVTGKPATFNISAVTGQAVYGG-KVVINV 73 (120)
Q Consensus 32 ~~~~v~~v~i~P~p--~~~G~~~~i~~~~~~~~~v~~g-~~~v~~ 73 (120)
..+++++.+++.-. +..|+.+.+.++|.++..|.+| ..++.+
T Consensus 38 ~kvt~~~~~~~~~~~~~~~~~~~~l~~~f~~~~~vk~GD~fti~l 82 (363)
T 4f27_A 38 DKVTASDFKLEKTAFDPNQSGNTFMAANFKVTGQVKSGDYFTAKL 82 (363)
T ss_dssp GGEEEEEEEESCSEECTTBTCCEEEEEEEEESSCCCTTCEEEEEC
T ss_pred eeEEEEecccccccccCCCCceEEEEEEEEcCCCCCCCCEEEEEc
Confidence 46888888887753 4569999999999999889999 556654
No 33
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=61.61 E-value=16 Score=30.38 Aligned_cols=74 Identities=9% Similarity=-0.038 Sum_probs=41.3
Q ss_pred CCCCCCceEEEEEEEecceecCcEEEEEEEECe---EEecCCCCCCCCCCCCCCCCCc-EEEEEEEecCCCCCCeeEEe
Q 033390 45 PVVTGKPATFNISAVTGQAVYGGKVVINVAYFG---VPVHQETRDVCEEVSCPIAAGD-FVLSHTQTLPSFTPPVRLLH 119 (120)
Q Consensus 45 p~~~G~~~~i~~~~~~~~~v~~g~~~v~~~~~g---i~~~~~~~dlC~~~~CPl~~G~-~~~~~s~~iP~~~P~g~y~~ 119 (120)
.++|||.+++.+.|. ...-+..++++....|- +++.....+.|=....=-+.|. -+++.++..|..+|-|+|++
T Consensus 33 IVRRGQ~F~i~l~f~-G~~Ps~~~~~~~~~~gT~~~~~l~~~~~~~~W~A~v~~~~~~~~~~tvsv~spa~A~VG~Y~L 110 (695)
T 1g0d_A 33 IVRRGQPFSITLQCS-DSLPPKHHLELVLHLGKRDEVVIKVQKEHGARDKWWFNQQGAQDEILLTLHSPANAVIGHYRL 110 (695)
T ss_dssp EEETTSCEEEEEEES-SCCCTTCEEEEEEEESTTCSEEEEEBSSSCCSSSCEEEEEECSSEEEEEEECCTTCCCEEEEE
T ss_pred EEcCCCcEEEEEEeC-CCCCCccccccccCCCcEEEEEecccCCCCceeEEEEecCCCeeeEEEEEeCCCCCeEEEEEE
Confidence 478999999999886 22222223344333332 4544433332222111111222 13788889999999999986
No 34
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=58.93 E-value=8.6 Score=28.09 Aligned_cols=18 Identities=6% Similarity=0.023 Sum_probs=12.3
Q ss_pred CCCCCCCCC-cEEEEEEEe
Q 033390 90 EVSCPIAAG-DFVLSHTQT 107 (120)
Q Consensus 90 ~~~CPl~~G-~~~~~~s~~ 107 (120)
.+.||++|| +|+|+++..
T Consensus 98 ~~~~~i~PG~t~~Y~~~~~ 116 (299)
T 3t9w_A 98 MNGSAVMPGQTRRYTWRSH 116 (299)
T ss_dssp TTTCCBCTTCEEEEEEBCC
T ss_pred cccCccCCCCeEEEEEEee
Confidence 358999999 466555443
No 35
>1suj_A CONE arrestin; sensory transduction, signaling protein; 2.38A {Ambystoma tigrinum}
Probab=58.40 E-value=50 Score=25.42 Aligned_cols=72 Identities=11% Similarity=0.143 Sum_probs=42.7
Q ss_pred EEE-EEEeCCCCCCCCceEEEEE-----EEecceecCcEEEEEEEECeEEecCCCCCCCCCCCCCC---------CCCcE
Q 033390 36 IQQ-VKIIPDPVVTGKPATFNIS-----AVTGQAVYGGKVVINVAYFGVPVHQETRDVCEEVSCPI---------AAGDF 100 (120)
Q Consensus 36 v~~-v~i~P~p~~~G~~~~i~~~-----~~~~~~v~~g~~~v~~~~~gi~~~~~~~dlC~~~~CPl---------~~G~~ 100 (120)
|.+ |.+.|.- .+|+.+-+++. |.-..++-..+..-.....-..++... + .-++ ++|.+
T Consensus 36 vdGvV~vd~~~-lk~rkv~~~l~~~fryGred~~v~Gl~f~kel~~~~~qv~p~~----~--~~~~t~lQe~Ll~~~G~h 108 (392)
T 1suj_A 36 VDGVVLIDPEY-LKDRKVFVTLTCAFRYGRDDLDLIGMSFRKDLYSLATQVYPPE----T--KEPLTPLQEKLMKKLGAH 108 (392)
T ss_dssp EEEEEEECTTT-SSSCEEEEEEEEEEEEECCSSCCSSCEEEEEEEEEEEEEESCC----S--CCCCCHHHHHHHHHHCSS
T ss_pred eeeEEEEcHHH-hccceEEEEEEEeeccCCCchhcCcceEEEEEEEEEEEEeCCC----C--CccccHHHHHhhhcccCe
Confidence 344 4556665 56788877777 443444433344333333333433322 1 2244 58999
Q ss_pred EEEEEEecCCCCCC
Q 033390 101 VLSHTQTLPSFTPP 114 (120)
Q Consensus 101 ~~~~s~~iP~~~P~ 114 (120)
.|.+++.||..+|+
T Consensus 109 ~fPFsFqLP~~lPs 122 (392)
T 1suj_A 109 AYPFCFKMGTNLPC 122 (392)
T ss_dssp EEEEEECCCSSCCC
T ss_pred eEeEEeeCCCCCCC
Confidence 99999999998886
No 36
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=56.14 E-value=25 Score=28.00 Aligned_cols=22 Identities=18% Similarity=0.250 Sum_probs=14.5
Q ss_pred CCCCCCC-C-cEEEEEEEecCCCCCCeeE
Q 033390 91 VSCPIAA-G-DFVLSHTQTLPSFTPPVRL 117 (120)
Q Consensus 91 ~~CPl~~-G-~~~~~~s~~iP~~~P~g~y 117 (120)
+.||+.| | +|+|.+. ++. +|.|
T Consensus 112 tq~~I~P~G~~~~Y~f~--~~q---~GT~ 135 (559)
T 2q9o_A 112 TECPIPPKGGQRTYRWR--ARQ---YGTS 135 (559)
T ss_dssp TBCCBCTTTEEEEEEEE--CCS---CEEE
T ss_pred ccCccCCCCCeEEEEEE--CCC---CEEE
Confidence 4799999 9 4555554 442 5665
No 37
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=55.45 E-value=13 Score=22.29 Aligned_cols=21 Identities=14% Similarity=-0.181 Sum_probs=16.1
Q ss_pred CCcEEEEEEEecCCCCCCeeEEe
Q 033390 97 AGDFVLSHTQTLPSFTPPVRLLH 119 (120)
Q Consensus 97 ~G~~~~~~s~~iP~~~P~g~y~~ 119 (120)
.|.++ .++.+|+.++.|.|++
T Consensus 60 ~G~~~--~~f~Lp~~~~~G~y~i 80 (102)
T 2p9r_A 60 GGLKQ--FSFPLSSEPFQGSYKV 80 (102)
T ss_dssp TTEEE--EEEECCSSCCCEEEEE
T ss_pred CCEEE--EEEECCCCCCCeeEEE
Confidence 46655 5667899999999987
No 38
>2vtc_A CEL61B, cellulase; hydrolase, glycoside; HET: NAG; 1.6A {Hypocrea jecorina}
Probab=54.82 E-value=8.6 Score=27.74 Aligned_cols=17 Identities=24% Similarity=0.282 Sum_probs=14.5
Q ss_pred EEEEecCCCCCCeeEEe
Q 033390 103 SHTQTLPSFTPPVRLLH 119 (120)
Q Consensus 103 ~~s~~iP~~~P~g~y~~ 119 (120)
+.+++||+.+|+|+|-+
T Consensus 160 ~~~~tIP~~l~~G~YLl 176 (249)
T 2vtc_A 160 KWTVKIPSSLRPGNYVF 176 (249)
T ss_dssp EEEEECCTTBCSEEEEE
T ss_pred eeEEEcCCCCCCcceEE
Confidence 46778999999999965
No 39
>3mtx_A Protein MD-1; LY86, RP105 associated protein, immune system; HET: PGT PGE; 2.00A {Gallus gallus} PDB: 3mu3_A*
Probab=54.56 E-value=24 Score=23.60 Aligned_cols=32 Identities=13% Similarity=0.025 Sum_probs=26.6
Q ss_pred eCCCCCCCCceEEEEEEEecc-eecCcEEEEEE
Q 033390 42 IPDPVVTGKPATFNISAVTGQ-AVYGGKVVINV 73 (120)
Q Consensus 42 ~P~p~~~G~~~~i~~~~~~~~-~v~~g~~~v~~ 73 (120)
+-|+..+|+.++....+.... ++..|+..+.+
T Consensus 89 sfC~~~KGE~i~~~~~v~~pg~~~p~G~Y~vva 121 (151)
T 3mtx_A 89 IFCGKKKGEHLYYEGPITLGIKEIPQRDYTITA 121 (151)
T ss_dssp TTTTCCTTCEEEEEEEEECCCSSCCCEEEEEEE
T ss_pred cccCccCCeeEEEEEEeecCceecCCCcEEEEE
Confidence 458999999999999999888 89999754443
No 40
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=52.96 E-value=9.6 Score=31.82 Aligned_cols=56 Identities=4% Similarity=-0.041 Sum_probs=28.7
Q ss_pred CCCCCceEEEEEEEecceecCcEEEEEEEECeEEecCCCCCCCCCCCCCCCCCcEEEEEEEecC
Q 033390 46 VVTGKPATFNISAVTGQAVYGGKVVINVAYFGVPVHQETRDVCEEVSCPIAAGDFVLSHTQTLP 109 (120)
Q Consensus 46 ~~~G~~~~i~~~~~~~~~v~~g~~~v~~~~~gi~~~~~~~dlC~~~~CPl~~G~~~~~~s~~iP 109 (120)
.+.|+.+.|++.=.+++. ..+..-|+.++....|+=..+.||+.||. ++++.+.++
T Consensus 203 ~~~GD~v~v~~~N~l~~~-------~siH~HG~~~~~~~~dG~~~~~~~I~PG~-~~tY~f~~~ 258 (770)
T 2r7e_B 203 AEVEDNIMVTFRNQASRP-------YSFYSSLISYEEDQRQGAEPRKNFVKPNE-TKTYFWKVQ 258 (770)
T ss_dssp CCSSSCEEEEEECCSSSC-------CCCCBTTCCCCCCSSSCTTTTSSCCCSSC-EEEEECCCC
T ss_pred EEcCCEEEEEEEECCCCC-------cceeecccccccccCCCCcCccCccCCCC-eEEEEEEec
Confidence 345777766664443321 12233455444333233323689999994 334444455
No 41
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=52.32 E-value=12 Score=29.33 Aligned_cols=25 Identities=20% Similarity=0.125 Sum_probs=15.7
Q ss_pred CCCCCCCCcEEEEEEEecCCCCCCeeE
Q 033390 91 VSCPIAAGDFVLSHTQTLPSFTPPVRL 117 (120)
Q Consensus 91 ~~CPl~~G~~~~~~s~~iP~~~P~g~y 117 (120)
..||+.||. ++++.++++.. ++|.|
T Consensus 121 pq~~I~PG~-s~~Y~f~~~~~-~~GT~ 145 (481)
T 3zx1_A 121 PHDPILAGE-ERIYRFEIPQD-SAGTY 145 (481)
T ss_dssp TTSCBCTTC-EEEEEEECCTT-CCEEE
T ss_pred ccCcCCCCC-eEEEEEeCCCC-CCceE
Confidence 479999995 34444555544 45655
No 42
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=50.12 E-value=10 Score=27.61 Aligned_cols=18 Identities=11% Similarity=0.156 Sum_probs=11.4
Q ss_pred CCCCCCCcEEEEEEEecCC
Q 033390 92 SCPIAAGDFVLSHTQTLPS 110 (120)
Q Consensus 92 ~CPl~~G~~~~~~s~~iP~ 110 (120)
.||+.||+ ++++.+.++.
T Consensus 111 ~~~I~PG~-~~~Y~f~~~~ 128 (306)
T 1sdd_A 111 DDAVAPGQ-EYTYEWIISE 128 (306)
T ss_dssp TTCBCTTC-EEEEEEECCG
T ss_pred CCccCCCC-eEEEEEEeCC
Confidence 59999995 3334444544
No 43
>4eir_A Polysaccharide monooxygenase-2; GH61, PMO, cellulase, biofuels copper monooxygenase, peroxide, superoxide, CBP21, beta-SAN fold, secreted; HET: HIC NAG GOL; 1.10A {Neurospora crassa}
Probab=49.77 E-value=13 Score=26.48 Aligned_cols=17 Identities=24% Similarity=0.450 Sum_probs=14.3
Q ss_pred EEEEecCCCCCCeeEEe
Q 033390 103 SHTQTLPSFTPPVRLLH 119 (120)
Q Consensus 103 ~~s~~iP~~~P~g~y~~ 119 (120)
+.+++||+.+|+|+|-+
T Consensus 133 ~~~~~iP~~l~~G~Yll 149 (223)
T 4eir_A 133 RHSIKIPECIAPGQYLL 149 (223)
T ss_dssp EEEEECCTTSCCEEEEE
T ss_pred eEEEECCCCCCCCceEE
Confidence 45678999999999975
No 44
>3eja_A Protein GH61E; beta sandwich, fibronectin type III fold, metal site, magnes unknown function; HET: NAG; 1.90A {Thielavia terrestris} PDB: 3eii_A*
Probab=49.70 E-value=12 Score=26.40 Aligned_cols=18 Identities=17% Similarity=0.102 Sum_probs=14.8
Q ss_pred EEEEEecCCCCCCeeEEe
Q 033390 102 LSHTQTLPSFTPPVRLLH 119 (120)
Q Consensus 102 ~~~s~~iP~~~P~g~y~~ 119 (120)
-+.+++||+.+|+|+|-+
T Consensus 117 ~~~~~~iP~~l~~G~Yll 134 (208)
T 3eja_A 117 SSFAVPIPPCIKSGYYLL 134 (208)
T ss_dssp CEEEEECCSSBCSEEEEE
T ss_pred CceEEeccCCCCCcceEE
Confidence 346678999999999965
No 45
>4eis_A Polysaccharide monooxygenase-3; GH61, PMO, cellulase, biofuels, CBM33, copper monooxygenase, peroxide, superoxide, CBP21, beta-sandwich fold; HET: HIC DAH NAG; 1.37A {Neurospora crassa} PDB: 4eis_B*
Probab=47.88 E-value=13 Score=26.47 Aligned_cols=17 Identities=24% Similarity=0.235 Sum_probs=14.4
Q ss_pred EEEEecCCCCCCeeEEe
Q 033390 103 SHTQTLPSFTPPVRLLH 119 (120)
Q Consensus 103 ~~s~~iP~~~P~g~y~~ 119 (120)
+.+++||+.+|+|+|-+
T Consensus 136 ~~~~~IP~~l~~G~Yll 152 (225)
T 4eis_A 136 NYEYAIPSCLKPGYYLV 152 (225)
T ss_dssp EEEEECCTTBCSEEEEE
T ss_pred ceeEeccCCCCCcceEE
Confidence 46678999999999975
No 46
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=47.64 E-value=23 Score=27.07 Aligned_cols=25 Identities=16% Similarity=0.093 Sum_probs=17.3
Q ss_pred CCCCCCCCcEEEEEEEecCCCCCCeeE
Q 033390 91 VSCPIAAGDFVLSHTQTLPSFTPPVRL 117 (120)
Q Consensus 91 ~~CPl~~G~~~~~~s~~iP~~~P~g~y 117 (120)
..+++.||+ ++++++.+|.. ++|.|
T Consensus 85 ~~~~I~PG~-~~~Y~f~~~~~-~~GT~ 109 (439)
T 2xu9_A 85 PFLEIPPGE-SWTYEFTVPKE-LAGTF 109 (439)
T ss_dssp TTCCBCTTC-EEEEEEECCSS-CCEEE
T ss_pred CcccCCCCC-eEEEEEecCCC-CCcce
Confidence 357899995 45556667755 77766
No 47
>3zud_A GH61 isozyme A; hydrolase, degradation of recalcitrant biomass; HET: HIC NAG TAM; 1.25A {Thermoascus aurantiacus} PDB: 2yet_A*
Probab=45.97 E-value=14 Score=26.37 Aligned_cols=17 Identities=29% Similarity=0.370 Sum_probs=14.7
Q ss_pred EEEEecCCCCCCeeEEe
Q 033390 103 SHTQTLPSFTPPVRLLH 119 (120)
Q Consensus 103 ~~s~~iP~~~P~g~y~~ 119 (120)
+.+++||+.+|+|+|-+
T Consensus 140 ~~~~~IP~~l~~G~Yll 156 (228)
T 3zud_A 140 SWTVTIPTTIAPGNYVL 156 (228)
T ss_dssp EEEEECCSSBCCEEEEE
T ss_pred ccceeccCCCCCCceEE
Confidence 56788999999999975
No 48
>2f68_X Collagen adhesin; beta barrel, domain SWAP, cell adhesion; 1.95A {Staphylococcus aureus} PDB: 2f6a_A 1amx_A
Probab=45.96 E-value=20 Score=26.49 Aligned_cols=41 Identities=10% Similarity=0.268 Sum_probs=31.9
Q ss_pred cEEEEEEEEeCCCCCCCCceEEEEEEEe-cceecCc-EEEEEE
Q 033390 33 AVTIQQVKIIPDPVVTGKPATFNISAVT-GQAVYGG-KVVINV 73 (120)
Q Consensus 33 ~~~v~~v~i~P~p~~~G~~~~i~~~~~~-~~~v~~g-~~~v~~ 73 (120)
...|++++++|..+..|+.+.+.++|.+ +..+.+| +..+.+
T Consensus 14 ~~~its~~i~~~~i~~g~~~~v~~~f~~~~~~vK~GDt~~i~L 56 (313)
T 2f68_X 14 STNVTDLTVSPSKIEDGGKTTVKMTFDDKNGKIQNGDMIKVAW 56 (313)
T ss_dssp HHHEEEEEEESSEECTTEEEEEEEEEESSSSCCCTTEEEEEBC
T ss_pred ccceeEEEEcCceecCCceEEEEEEecCCCCCCCCCCEEEEEc
Confidence 3468999999998999999999999985 5677788 445443
No 49
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=42.74 E-value=19 Score=28.50 Aligned_cols=23 Identities=26% Similarity=0.469 Sum_probs=14.3
Q ss_pred CCCCCCCC-cEEEEEEEecCCCCCCeeE
Q 033390 91 VSCPIAAG-DFVLSHTQTLPSFTPPVRL 117 (120)
Q Consensus 91 ~~CPl~~G-~~~~~~s~~iP~~~P~g~y 117 (120)
+.||+.|| +|+|.++ ++. ++|.|
T Consensus 79 tq~pI~PG~~~~Y~f~--~~~--~~GT~ 102 (534)
T 1zpu_A 79 TQCPIAPGSTMLYNFT--VDY--NVGTY 102 (534)
T ss_dssp TBCCBCTTCEEEEEEE--CSS--CCEEE
T ss_pred ccCCcCCCCeEEEEEE--eCc--cceeE
Confidence 57999999 4555444 442 35554
No 50
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=41.57 E-value=19 Score=28.22 Aligned_cols=23 Identities=26% Similarity=0.535 Sum_probs=14.5
Q ss_pred CCCCCCCCc-EEEEEEEecCCCCCCeeE
Q 033390 91 VSCPIAAGD-FVLSHTQTLPSFTPPVRL 117 (120)
Q Consensus 91 ~~CPl~~G~-~~~~~s~~iP~~~P~g~y 117 (120)
+.||+.||. |+|.+ +++. ++|.|
T Consensus 83 tq~~I~PG~~~~Y~f--~~~~--~~GT~ 106 (503)
T 1hfu_A 83 NQCPISPGHAFLYKF--TPAG--HAGTF 106 (503)
T ss_dssp TBCCBCTTCEEEEEE--CCTT--CCEEE
T ss_pred ccCCcCCCCeEEEEE--EeCC--CCccE
Confidence 589999994 55444 4432 45655
No 51
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=41.51 E-value=19 Score=27.83 Aligned_cols=22 Identities=18% Similarity=0.232 Sum_probs=14.0
Q ss_pred CCCCCCCc-EEEEEEEecCCCCCCeeE
Q 033390 92 SCPIAAGD-FVLSHTQTLPSFTPPVRL 117 (120)
Q Consensus 92 ~CPl~~G~-~~~~~s~~iP~~~P~g~y 117 (120)
.||+.||. |+|+ +.++. ++|.|
T Consensus 78 ~~~i~PG~~~~Y~--f~~~~--~~GT~ 100 (448)
T 3aw5_A 78 SFAITPGESYNYS--FDVVN--RAGTY 100 (448)
T ss_dssp GGCBCTTCEEEEE--EECCS--CSEEE
T ss_pred CccCCCCCEEEEE--EEcCC--CCCce
Confidence 39999994 5544 44542 56765
No 52
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=41.49 E-value=15 Score=28.40 Aligned_cols=22 Identities=9% Similarity=0.143 Sum_probs=13.9
Q ss_pred CCCCCCC-cEEEEEEEecCCCCCCeeE
Q 033390 92 SCPIAAG-DFVLSHTQTLPSFTPPVRL 117 (120)
Q Consensus 92 ~CPl~~G-~~~~~~s~~iP~~~P~g~y 117 (120)
.||+.|| +|+|.++ ++ -++|.|
T Consensus 90 ~~~i~PG~~~~Y~f~--~~--~~~GT~ 112 (451)
T 2uxt_A 90 ARMMSPNADWAPVLP--IR--QNAATL 112 (451)
T ss_dssp GGCBCTTCEECCEEE--CC--SCSEEE
T ss_pred cCcCCCCCeEEEEEE--cC--CCCcce
Confidence 6999999 4554444 33 246655
No 53
>1kmt_A RHO GDP-dissociation inhibitor 1; immunoglobulin fold, beta sandwich motif, isoprenyl-binding, protein binding; 1.30A {Homo sapiens} SCOP: b.1.18.8 PDB: 2jhu_A 2jhv_A 2jhw_A 1ft3_A 1ft0_A 1qvy_A 2jhz_A 2bxw_A 2jhx_A 2jhy_A 1rho_A 1fso_A 2ji0_A 2jhs_A* 2jht_A 1ajw_A 1gdf_A
Probab=41.07 E-value=44 Score=21.95 Aligned_cols=37 Identities=19% Similarity=0.226 Sum_probs=29.0
Q ss_pred CCCCCCceEEEEEEEecceecCc-EEEEEEEECeEEec
Q 033390 45 PVVTGKPATFNISAVTGQAVYGG-KVVINVAYFGVPVH 81 (120)
Q Consensus 45 p~~~G~~~~i~~~~~~~~~v~~g-~~~v~~~~~gi~~~ 81 (120)
.++-|....+.++|.+++++-+| +..=.++-.|+++-
T Consensus 40 ~iKEG~~Y~iki~F~V~~eivsGLkY~q~v~r~Gi~Vd 77 (141)
T 1kmt_A 40 VLKEGVEYRIKISFRVNREIVSGMKYIQHTYRKGVKID 77 (141)
T ss_dssp EEETTCEEEEEEEEEECSSCEEEEEEEEEEEETTEEEE
T ss_pred EccCCcEEEEEEEEEEccccccCcEEEEEEEECCEEEC
Confidence 36778999999999999998888 55555677787653
No 54
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=40.44 E-value=29 Score=29.91 Aligned_cols=19 Identities=5% Similarity=-0.055 Sum_probs=12.1
Q ss_pred CCCCCCCcEEEEEEEecCCC
Q 033390 92 SCPIAAGDFVLSHTQTLPSF 111 (120)
Q Consensus 92 ~CPl~~G~~~~~~s~~iP~~ 111 (120)
.||++||. ++++.++++..
T Consensus 146 ~~~I~PG~-t~tY~f~~~~~ 164 (1065)
T 2j5w_A 146 DDKVYPGE-QYTYMLLATEE 164 (1065)
T ss_dssp GGCBCTTC-EEEEEEECCST
T ss_pred ccccCCCC-EEEEEEEeccc
Confidence 69999994 33444445543
No 55
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=39.63 E-value=17 Score=30.12 Aligned_cols=25 Identities=16% Similarity=0.150 Sum_probs=16.6
Q ss_pred CCCCCCCCCCCcEEEEEEEecCCCCC
Q 033390 88 CEEVSCPIAAGDFVLSHTQTLPSFTP 113 (120)
Q Consensus 88 C~~~~CPl~~G~~~~~~s~~iP~~~P 113 (120)
...+.||+.||. ++++++.++....
T Consensus 497 ~~~~~~~I~PG~-t~tY~f~~~~~ag 521 (742)
T 2r7e_A 497 KHLKDFPILPGE-IFKYKWTVTVEDG 521 (742)
T ss_dssp SSTTTSCCBSSC-EECCEEECCSTTS
T ss_pred cccccccCCCCC-eEEEEEEeccccC
Confidence 344689999995 4555566776544
No 56
>3vq2_C Lymphocyte antigen 96; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_C* 2z64_C*
Probab=38.90 E-value=61 Score=21.47 Aligned_cols=33 Identities=9% Similarity=-0.079 Sum_probs=26.8
Q ss_pred EeCCCCCCCCceEEEEEEEecce-ecCcEEEEEE
Q 033390 41 IIPDPVVTGKPATFNISAVTGQA-VYGGKVVINV 73 (120)
Q Consensus 41 i~P~p~~~G~~~~i~~~~~~~~~-v~~g~~~v~~ 73 (120)
.+-|+.++|+.+..++.++.... +..|...+.+
T Consensus 86 ySfCg~~KGE~i~~~~~~~~~~~~fpkG~Y~~v~ 119 (144)
T 3vq2_C 86 YSFCRALKGETVNTSIPFSFEGILFPKGHYRCVA 119 (144)
T ss_dssp SGGGGCCTTCCEEEEEEEEECCCCCCSSEEEEEE
T ss_pred ceecccccCcEEEEEEEeecCcEEccCCcEEEEE
Confidence 45689999999999999998887 9999654433
No 57
>1pfs_A PF3 SSDBP, PF3 single-stranded DNA binding protein; viral, bacteriophage PF3; NMR {Pseudomonas phage PF3} SCOP: b.40.4.7
Probab=38.67 E-value=33 Score=20.17 Aligned_cols=17 Identities=18% Similarity=0.317 Sum_probs=10.7
Q ss_pred CCCCCCCcEEEEEEEec
Q 033390 92 SCPIAAGDFVLSHTQTL 108 (120)
Q Consensus 92 ~CPl~~G~~~~~~s~~i 108 (120)
.=+++||.|+..+...+
T Consensus 45 eev~paG~Ye~d~~~~V 61 (78)
T 1pfs_A 45 ESVIPAGSYQVPYRINV 61 (78)
T ss_dssp SSCCCSEEEEEEEEEEE
T ss_pred ccCCCCCceecceEeee
Confidence 35777887776655443
No 58
>3b72_A Lysozyme C; hen egg-white lysozyme, protein-SDS complex, MPD, allergen, antimicrobial, bacteriolytic enzyme glycosidase, hydrolase; 1.50A {Gallus gallus} SCOP: d.2.1.2 PDB: 3b6l_A 1lsy_A 1lsz_A*
Probab=37.36 E-value=6.3 Score=26.23 Aligned_cols=25 Identities=16% Similarity=0.263 Sum_probs=5.3
Q ss_pred CchhhHHHHHHHHHHhhccccceeecC
Q 033390 1 MDRQLMLFACFLLLVSSTQAIGVKYCD 27 (120)
Q Consensus 1 m~~~~~l~~~~~l~~~~~~~~~~~~C~ 27 (120)
|+. +++++++++++.+++-.|..|.
T Consensus 1 m~~--~~~~l~~~l~~~~~ak~~~rCe 25 (147)
T 3b72_A 1 MRS--LLILVLCFLPLAALGKVFGRCE 25 (147)
T ss_dssp --------------------CBCCHHH
T ss_pred Chh--HHHHHHHHHHHhhceeeecccH
Confidence 675 3333344444455667788883
No 59
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=36.83 E-value=1.5e+02 Score=23.06 Aligned_cols=75 Identities=13% Similarity=-0.001 Sum_probs=48.5
Q ss_pred cEEEEEEEEeCCCCCCCCceEEEEEEEecce----ecCcE-EEEE------------EEECeEEecCCCCCCCCCCCCCC
Q 033390 33 AVTIQQVKIIPDPVVTGKPATFNISAVTGQA----VYGGK-VVIN------------VAYFGVPVHQETRDVCEEVSCPI 95 (120)
Q Consensus 33 ~~~v~~v~i~P~p~~~G~~~~i~~~~~~~~~----v~~g~-~~v~------------~~~~gi~~~~~~~dlC~~~~CPl 95 (120)
.+++-++..+-..++.|+.++++..+.+-++ +.... .-+. -.++|-+.+ .+=++
T Consensus 42 Ti~wyD~~~S~~~~~vne~~tiTGk~~~~~~WP~~v~~p~~~fln~~~Pgp~~~r~~~~ing~p~~---------~s~~l 112 (419)
T 3rfr_A 42 TLNWYDVQWSKTTVNVNEEMILSGKVHVFSAWPQAVANPRVSFLNAGEPGPVLVRTAQFIGEQFAP---------RSVSL 112 (419)
T ss_dssp SEEEEEEECSCSEEETTCEEEEEEEEEECTTCCTTSCCTTSEEEEEECSSSSEEEEEEEETTEECS---------SCBCC
T ss_pred eEEEEEeeeccceeccCCEEEEEEEEEEcccChhhcCCcceeEEecCCCCcceeehhhhhcCcCCc---------ceEEe
Confidence 6799999999889999999999999887522 22221 1222 233333322 25688
Q ss_pred CCC-cEEEEEEEecCCCCCCeeEEe
Q 033390 96 AAG-DFVLSHTQTLPSFTPPVRLLH 119 (120)
Q Consensus 96 ~~G-~~~~~~s~~iP~~~P~g~y~~ 119 (120)
+.| +|.|+..+.- --+|.|++
T Consensus 113 ~~G~~Y~fki~lka---R~PG~~HV 134 (419)
T 3rfr_A 113 EIGKDYAFSINLRG---RRAGRWHV 134 (419)
T ss_dssp CTTCEEEEEEEEEE---CSCEEEEE
T ss_pred cCCCeEeEEEEEec---ccCccccc
Confidence 899 7888776542 22466664
No 60
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=33.39 E-value=16 Score=30.31 Aligned_cols=15 Identities=7% Similarity=0.027 Sum_probs=10.3
Q ss_pred CCCCCCCC-cEEEEEE
Q 033390 91 VSCPIAAG-DFVLSHT 105 (120)
Q Consensus 91 ~~CPl~~G-~~~~~~s 105 (120)
+.||+.|| +|+|+++
T Consensus 125 tq~~I~PG~s~tY~f~ 140 (742)
T 2r7e_A 125 EDDKVFPGGSHTYVWQ 140 (742)
T ss_dssp SSSSCCTTCEECCEEE
T ss_pred ccCcCCCCCeEEEEEE
Confidence 46999999 4554444
No 61
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=32.90 E-value=35 Score=25.00 Aligned_cols=22 Identities=18% Similarity=0.345 Sum_probs=14.5
Q ss_pred CCCCCCCC-cEEEEEEEecCCCCCCeeE
Q 033390 91 VSCPIAAG-DFVLSHTQTLPSFTPPVRL 117 (120)
Q Consensus 91 ~~CPl~~G-~~~~~~s~~iP~~~P~g~y 117 (120)
+.||+.|| +|+|.++ ++ ++|.|
T Consensus 78 t~~~i~PG~~~~y~f~--~~---~~Gt~ 100 (318)
T 3g5w_A 78 TQHAIEPGDTFTYKFK--AE---PAGTM 100 (318)
T ss_dssp TBCCBCTTCEEEEEEE--CC---SCEEE
T ss_pred ccccCCCCCEEEEEEE--cC---CCEEE
Confidence 47999999 4555554 33 45665
No 62
>1j8r_A PAPG adhesin, pyelonephritic adhesin; PAG adhesin, GBO4, structural genomics, PSI, protein structure initiative; HET: NGA GLA GAL BGC; 1.80A {Escherichia coli} SCOP: b.2.3.3 PDB: 1j8s_A
Probab=32.79 E-value=43 Score=22.94 Aligned_cols=18 Identities=17% Similarity=0.087 Sum_probs=15.2
Q ss_pred EEEEEecCCCCCCeeEEe
Q 033390 102 LSHTQTLPSFTPPVRLLH 119 (120)
Q Consensus 102 ~~~s~~iP~~~P~g~y~~ 119 (120)
+.+.+.+|.-+|.|+|++
T Consensus 134 l~f~~~LP~DLPkG~Y~~ 151 (196)
T 1j8r_A 134 IIFKVALPADLPLGDYSV 151 (196)
T ss_dssp EEEEEECCTTCCSEEEEE
T ss_pred EEEEEEccccCCCCcccc
Confidence 556788999999999985
No 63
>1ds6_B RHO GDP-dissociation inhibitor 2; beta sandwhich, protein-protein complex, G-domain, immunoglobulin fold, walker fold, GTP-binding protein; HET: GDP; 2.35A {Homo sapiens} SCOP: b.1.18.8 PDB: 1fst_A
Probab=31.25 E-value=50 Score=22.64 Aligned_cols=36 Identities=22% Similarity=0.251 Sum_probs=28.2
Q ss_pred CCCCCceEEEEEEEecceecCc-EEEEEEEECeEEec
Q 033390 46 VVTGKPATFNISAVTGQAVYGG-KVVINVAYFGVPVH 81 (120)
Q Consensus 46 ~~~G~~~~i~~~~~~~~~v~~g-~~~v~~~~~gi~~~ 81 (120)
++-|....+.++|.+++++-+| +..=.++-.|+++-
T Consensus 80 iKEGs~Y~iki~F~V~~eivsGLkY~q~v~r~Gi~Vd 116 (180)
T 1ds6_B 80 LKEGSEYRVKIHFKVNRDIVSGLKYVQHTYRTGVKVD 116 (180)
T ss_dssp EETTCEEEEEEEECCCSSCEEEEEEEEEEEETTEEEE
T ss_pred ecCCcEEEEEEEEEEecccccCcEEEEEEEECCEEEC
Confidence 6778889999999999988888 55555677777653
No 64
>2d7p_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 PDB: 2eeb_A
Probab=29.56 E-value=44 Score=20.64 Aligned_cols=23 Identities=22% Similarity=0.374 Sum_probs=10.2
Q ss_pred EEEEEEEecceecCcEEEEEEEECeE
Q 033390 53 TFNISAVTGQAVYGGKVVINVAYFGV 78 (120)
Q Consensus 53 ~i~~~~~~~~~v~~g~~~v~~~~~gi 78 (120)
+..++|+..+ .|...+.++++|.
T Consensus 66 ty~v~ytP~~---~G~h~v~V~~~g~ 88 (112)
T 2d7p_A 66 KHTIRFIPHE---NGVHSIDVKFNGA 88 (112)
T ss_dssp EEEEEECCSS---CEEEEEEEEESSC
T ss_pred eEEEEEEcCC---CEeEEEEEEECCe
Confidence 3444444333 3444444455443
No 65
>2z1p_A ACE, collagen adhesin protein; cell adhesion; 2.50A {Enterococcus faecalis}
Probab=29.30 E-value=43 Score=25.27 Aligned_cols=40 Identities=13% Similarity=0.292 Sum_probs=30.7
Q ss_pred cEEEEEEEEeCCCCCCCCceEEEEEEEe--cceecCc-EEEEE
Q 033390 33 AVTIQQVKIIPDPVVTGKPATFNISAVT--GQAVYGG-KVVIN 72 (120)
Q Consensus 33 ~~~v~~v~i~P~p~~~G~~~~i~~~~~~--~~~v~~g-~~~v~ 72 (120)
...|+++++++..+..|+.+++.++|.. +..+.+| +..+.
T Consensus 17 ~~~Its~~i~~t~i~~g~~~~v~~~f~~~~~~~iK~GDt~tit 59 (348)
T 2z1p_A 17 SSIVDKVELDHTTLYQGEMTSIKVSFSDKENQKIKPGDTITLT 59 (348)
T ss_dssp SSCEEEEEESCSEEETTCEEEEEEEEECCSSCC-CCSCCCEEE
T ss_pred cceEEEEEECCceeccCCeEEEEEEecCcCCCcCCCCCEEEEE
Confidence 4578999999988888999999999976 4667777 34543
No 66
>1g4m_A Beta-arrestin1; sensory transduction, alternative splicing, signaling protein; 1.90A {Bos taurus} SCOP: b.1.18.11 b.1.18.11 PDB: 1g4r_A 3gd1_C 1jsy_A 1zsh_A* 2wtr_A 2wtr_B 3gc3_A 3p2d_A
Probab=29.00 E-value=22 Score=27.26 Aligned_cols=19 Identities=21% Similarity=0.329 Sum_probs=16.9
Q ss_pred CCCcEEEEEEEecCCCCCC
Q 033390 96 AAGDFVLSHTQTLPSFTPP 114 (120)
Q Consensus 96 ~~G~~~~~~s~~iP~~~P~ 114 (120)
++|.+.|.+++.||..+|+
T Consensus 107 ~~G~h~fPF~f~LP~~lPs 125 (393)
T 1g4m_A 107 KLGEHAYPFTFEIPPNLPC 125 (393)
T ss_dssp HSCTTEEEEEECCCTTSCC
T ss_pred cCCceEEEEEeeCCCCCCc
Confidence 3999999999999998885
No 67
>1doa_B RHO GDI 1, protein (GDP-dissociation inhibitor 1); GTP-binding protein, CDC42, cell cycle; HET: GDP GER; 2.60A {Bos taurus} SCOP: b.1.18.8 PDB: 1hh4_D* 1cc0_E*
Probab=27.52 E-value=64 Score=22.85 Aligned_cols=36 Identities=19% Similarity=0.249 Sum_probs=28.5
Q ss_pred CCCCCceEEEEEEEecceecCc-EEEEEEEECeEEec
Q 033390 46 VVTGKPATFNISAVTGQAVYGG-KVVINVAYFGVPVH 81 (120)
Q Consensus 46 ~~~G~~~~i~~~~~~~~~v~~g-~~~v~~~~~gi~~~ 81 (120)
++-|..+.+.++|.+++++-+| +..=.++-.|+++-
T Consensus 119 IKEGs~Y~lki~FkV~~eIVsGLkY~q~VkR~GI~Vd 155 (219)
T 1doa_B 119 LKEGVEYRIKISFRVNREIVSGMKYIQHTYRKGVKID 155 (219)
T ss_dssp EETTCEEEEEEEECBCSSCEEEEEEEEEEEETTEEEE
T ss_pred ecCCCEEEEEEEEEEecceecCcEEEEEEEECCeEEC
Confidence 6778889999999999988888 55556777887654
No 68
>1jb0_F Photosystem 1 reaction centre subunit III; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: f.23.16.1 PDB: 3pcq_F*
Probab=27.33 E-value=16 Score=24.73 Aligned_cols=29 Identities=28% Similarity=0.456 Sum_probs=7.8
Q ss_pred CchhhHHHHHHHHHHh-----hccccceeecCCC
Q 033390 1 MDRQLMLFACFLLLVS-----STQAIGVKYCDKK 29 (120)
Q Consensus 1 m~~~~~l~~~~~l~~~-----~~~~~~~~~C~~~ 29 (120)
|+|.+.+++++++++. .|+......|.+.
T Consensus 1 Mrrl~~~~l~~~~~~~~~p~a~A~~agLtpC~es 34 (164)
T 1jb0_F 1 MRRFLALLLVLTLWLGFTPLASADVAGLVPCKDS 34 (164)
T ss_dssp -----------------------CGGGCEEGGGC
T ss_pred CchHHHHHHHHHHHHccCchhhhhhcCCccCcCC
Confidence 7877666665555443 3444578889865
No 69
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=25.89 E-value=58 Score=25.58 Aligned_cols=22 Identities=14% Similarity=0.190 Sum_probs=13.9
Q ss_pred CCCCCCC-cEEEEEEEecCCCCCCeeE
Q 033390 92 SCPIAAG-DFVLSHTQTLPSFTPPVRL 117 (120)
Q Consensus 92 ~CPl~~G-~~~~~~s~~iP~~~P~g~y 117 (120)
.||+.|| +|+|.++ ++ -|+|.|
T Consensus 88 ~~~i~PG~~~~Y~f~--~~--~~aGT~ 110 (488)
T 3od3_A 88 QGIIPPGGKRSVTLN--VD--QPAATC 110 (488)
T ss_dssp TCCBCTTCEEEEEEE--CC--SCSEEE
T ss_pred cCcCcCCCeEEEEEe--cC--CCceeE
Confidence 7999999 4555443 33 245655
No 70
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=25.29 E-value=80 Score=24.91 Aligned_cols=14 Identities=7% Similarity=-0.330 Sum_probs=10.6
Q ss_pred CCCCCCCC-cEEEEE
Q 033390 91 VSCPIAAG-DFVLSH 104 (120)
Q Consensus 91 ~~CPl~~G-~~~~~~ 104 (120)
..||+.|| +|+|.+
T Consensus 108 ~~~~i~PG~~~~Y~f 122 (534)
T 3abg_A 108 AEDITEPGSFKDYYY 122 (534)
T ss_dssp SSSCBSSCSCCCEEE
T ss_pred CCCCCCCCCeEEEEE
Confidence 57999999 566554
No 71
>2xom_A Arabinogalactan endo-1,4-beta-galactosidase; hydrolase, carbohydrate-binding module, glycoside hydrolase, beta-sandwich.; HET: GAL; 0.95A {Thermotoga maritima} PDB: 2xon_A*
Probab=25.03 E-value=72 Score=20.73 Aligned_cols=19 Identities=16% Similarity=0.165 Sum_probs=12.7
Q ss_pred cEEEEEEEecCCCCCCeeEEe
Q 033390 99 DFVLSHTQTLPSFTPPVRLLH 119 (120)
Q Consensus 99 ~~~~~~s~~iP~~~P~g~y~~ 119 (120)
.|+.+.+++|- +|+|.|++
T Consensus 58 ~~~~~~~Qtvt--lp~gtYtl 76 (152)
T 2xom_A 58 SFSFELSQEVE--LPAGVYRV 76 (152)
T ss_dssp CEEEEEEEEEE--CCSEEEEE
T ss_pred CCeeEEEEEEE--eCCCeEEE
Confidence 35666667773 77777775
No 72
>2dmc_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=24.71 E-value=34 Score=21.36 Aligned_cols=30 Identities=13% Similarity=0.144 Sum_probs=18.7
Q ss_pred CCCCCceEEEEEEEecceecCcEEEEEEEECeE
Q 033390 46 VVTGKPATFNISAVTGQAVYGGKVVINVAYFGV 78 (120)
Q Consensus 46 ~~~G~~~~i~~~~~~~~~v~~g~~~v~~~~~gi 78 (120)
++..++=+..++|+..+ .|...+.++++|.
T Consensus 63 v~~~~~g~y~v~ftP~e---~G~h~v~V~~~g~ 92 (116)
T 2dmc_A 63 LKRLPNNHIGISFIPRE---VGEHLVSIKKNGN 92 (116)
T ss_dssp EEEETTTEEEEEECCCS---CEEEEEECBBSSS
T ss_pred EEeCCCCeEEEEEEeCC---CeeEEEEEEECCE
Confidence 33334445666666665 6777777787774
No 73
>2h6o_A Major outer envelope glycoprotein GP350; viral protein; HET: NAG MAN BMA NDG GAL FUC; 3.50A {Human herpesvirus 4}
Probab=24.41 E-value=1.1e+02 Score=23.34 Aligned_cols=32 Identities=9% Similarity=0.176 Sum_probs=22.9
Q ss_pred CCCCCceEEEEEEEecceecCcEEEEEEEECe
Q 033390 46 VVTGKPATFNISAVTGQAVYGGKVVINVAYFG 77 (120)
Q Consensus 46 ~~~G~~~~i~~~~~~~~~v~~g~~~v~~~~~g 77 (120)
.+|||...+++..++...-.+.+..++...+|
T Consensus 173 vVraQgmD~tvpislpt~p~~s~Fsi~~Em~g 204 (470)
T 2h6o_A 173 VVRAQGLDVTLPLSLPTSAQDSNFSVKTEMLG 204 (470)
T ss_dssp EESSSCEEEEEEEECSSCSSSCCBEEECCBCC
T ss_pred EEEecceeEEEecccCCCcccCceEEEEeecc
Confidence 46788888888888877766666666555544
No 74
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=24.35 E-value=49 Score=23.73 Aligned_cols=22 Identities=23% Similarity=0.220 Sum_probs=14.3
Q ss_pred CCCCCCCC-cEEEEEEEecCCCCCCeeE
Q 033390 91 VSCPIAAG-DFVLSHTQTLPSFTPPVRL 117 (120)
Q Consensus 91 ~~CPl~~G-~~~~~~s~~iP~~~P~g~y 117 (120)
..||+.|| +++|.+. ++ ++|.|
T Consensus 107 ~~~~i~PG~~~~y~f~--~~---~~Gt~ 129 (288)
T 3gdc_A 107 GAGSIAPGQSFTYEFD--AT---PFGTH 129 (288)
T ss_dssp TTCSBCTTCEEEEEEE--CC---SCEEE
T ss_pred cceeECCCCEEEEEEE--cC---CCccE
Confidence 36999999 4555554 32 56765
No 75
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=23.90 E-value=1.3e+02 Score=18.30 Aligned_cols=29 Identities=10% Similarity=0.060 Sum_probs=21.6
Q ss_pred CCCCCCCceEEEEEEE--ecceecCcEEEEE
Q 033390 44 DPVVTGKPATFNISAV--TGQAVYGGKVVIN 72 (120)
Q Consensus 44 ~p~~~G~~~~i~~~~~--~~~~v~~g~~~v~ 72 (120)
..++.|++++++++|+ ++..+++...++.
T Consensus 14 g~~~v~~~l~v~vsf~NPL~~~L~~c~~~vE 44 (102)
T 2xzz_A 14 GAAVVGQECEVQIVFKNPLPVTLTNVVFRLE 44 (102)
T ss_dssp SCCCSSSCEEEEEEEECCSSSCBCSEEEEEE
T ss_pred CCcccCCeEEEEEEEECCCCCcccCEEEEEE
Confidence 4567899999999998 6666666655543
No 76
>2jen_A Xyloglucanase, endo-beta-1,4-glucanase; plant cell WALL, glycosidase, hydrolase, family 12; HET: GLC BGC DIO; 1.4A {Bacillus licheniformis} PDB: 2jem_A
Probab=23.46 E-value=21 Score=25.91 Aligned_cols=42 Identities=14% Similarity=0.115 Sum_probs=12.5
Q ss_pred CchhhHHHHHHHHHHh---hccccceeecCCCCCccEEEEEEEEeCC
Q 033390 1 MDRQLMLFACFLLLVS---STQAIGVKYCDKKKNYAVTIQQVKIIPD 44 (120)
Q Consensus 1 m~~~~~l~~~~~l~~~---~~~~~~~~~C~~~~~~~~~v~~v~i~P~ 44 (120)
||.+++++++..++++ .+.+..++-|+.-. .....+-++.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~a~a~~~~~c~q~~--~~~~g~Y~l~nN 51 (261)
T 2jen_A 7 LKSILLWGAVCIIVLAGPLSAFAASSSNPSDKL--YFKNKKYYIFNN 51 (261)
T ss_dssp ----------------------CEEECSTTCEE--EETTTTEEEECC
T ss_pred HHHHHHHHHHHHHHhcCcccchhhhhhhhcccc--ceeeCCEEEEee
Confidence 4544444444444432 46667788898531 222334555554
No 77
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=23.27 E-value=80 Score=23.29 Aligned_cols=16 Identities=6% Similarity=0.098 Sum_probs=11.4
Q ss_pred CCCCCCCC-cEEEEEEE
Q 033390 91 VSCPIAAG-DFVLSHTQ 106 (120)
Q Consensus 91 ~~CPl~~G-~~~~~~s~ 106 (120)
..||+.|| .|+|.+..
T Consensus 118 t~~~I~PG~~~~y~f~~ 134 (343)
T 3cg8_A 118 NKSDVEPGGTRTYTWRT 134 (343)
T ss_dssp TTCSBCTTCEEEEEEEC
T ss_pred ccccccCCCEEEEEEEe
Confidence 47999999 46655543
No 78
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=22.13 E-value=77 Score=19.36 Aligned_cols=12 Identities=25% Similarity=0.670 Sum_probs=6.9
Q ss_pred CCCCCcEEEEEE
Q 033390 94 PIAAGDFVLSHT 105 (120)
Q Consensus 94 Pl~~G~~~~~~s 105 (120)
|+.+|.|+....
T Consensus 75 ~L~~G~YtV~Wr 86 (104)
T 1lyq_A 75 PLPAGTYRVDWR 86 (104)
T ss_dssp CCCSEEEEEEEE
T ss_pred CCCCceEEEEEE
Confidence 556666665554
No 79
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=21.80 E-value=93 Score=22.03 Aligned_cols=16 Identities=6% Similarity=0.059 Sum_probs=10.9
Q ss_pred CCCCCCCCCc-EEEEEE
Q 033390 90 EVSCPIAAGD-FVLSHT 105 (120)
Q Consensus 90 ~~~CPl~~G~-~~~~~s 105 (120)
.+.||+.||+ |+|.+.
T Consensus 76 ~t~~~i~pG~~~~Y~f~ 92 (276)
T 3kw8_A 76 MNKSDVEPGGTRTYTWR 92 (276)
T ss_dssp TTTCSBCTTCEEEEEEE
T ss_pred CCcCCCCCCCEEEEEEE
Confidence 4579999994 554444
No 80
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=21.66 E-value=2e+02 Score=23.70 Aligned_cols=83 Identities=8% Similarity=0.005 Sum_probs=43.8
Q ss_pred ccEEEEEEEEeCCCCCCCCceEEEEEEEecceecCcEEEEEEEECeE--EecCCCCCCCCCCCC-CCCCCc-EEEEEEEe
Q 033390 32 YAVTIQQVKIIPDPVVTGKPATFNISAVTGQAVYGGKVVINVAYFGV--PVHQETRDVCEEVSC-PIAAGD-FVLSHTQT 107 (120)
Q Consensus 32 ~~~~v~~v~i~P~p~~~G~~~~i~~~~~~~~~v~~g~~~v~~~~~gi--~~~~~~~dlC~~~~C-Pl~~G~-~~~~~s~~ 107 (120)
+.|+.++++++.. ++.++++++-+-..+. .|+-.+++++..- .+......|....+= -++||+ -+.++++.
T Consensus 601 TtF~ys~~~~~~~----~~~~~v~v~VtNtG~~-~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~~L~pGes~~V~~~l~ 675 (721)
T 2x41_A 601 TTFEYSDLNVSFD----GETLRVQYRIENTGGR-AGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLLNPGESEEVVLEIP 675 (721)
T ss_dssp SCEEEEEEEEEEC----SSEEEEEEEEEECSSS-CBCCEEEEEEECCCSSSCCCSCEEEEEEECCCBCTTCEEEEEEEEE
T ss_pred ceeEeeceEeecC----CCeEEEEEEEEECCCC-CCcEEeeEEEccCCCCCCCchHHhhcccccccCCCCCeEEEEEEEC
Confidence 5778888888743 5667777766655553 4432333333221 111222344444455 689994 34444432
Q ss_pred cC---------CCCCCeeEEe
Q 033390 108 LP---------SFTPPVRLLH 119 (120)
Q Consensus 108 iP---------~~~P~g~y~~ 119 (120)
.- ..+++|.|.+
T Consensus 676 ~~~l~~~d~~~~~~e~G~y~v 696 (721)
T 2x41_A 676 VRDLASFNGEEWVVEAGEYEV 696 (721)
T ss_dssp GGGGCEECSSCEEECCEEEEE
T ss_pred HHHhcEEcCCeEEEeCceEEE
Confidence 21 2366788775
No 81
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=20.20 E-value=89 Score=18.95 Aligned_cols=12 Identities=25% Similarity=0.686 Sum_probs=7.2
Q ss_pred CCCCCcEEEEEE
Q 033390 94 PIAAGDFVLSHT 105 (120)
Q Consensus 94 Pl~~G~~~~~~s 105 (120)
|+.+|.|+....
T Consensus 73 ~L~~G~YtV~Wr 84 (102)
T 2c9r_A 73 PLTAGTYKVDWR 84 (102)
T ss_dssp CCCSEEEEEEEE
T ss_pred CCCCceEEEEEE
Confidence 566666665554
Done!