Citrus Sinensis ID: 033396

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Protein Sequence
MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSAQLPYSQRKFFVKSRGPYGSIH
Secondary Structure (PSIPRED)
ccccccccccccccEEEEcccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHHHHHccccccEEEcccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHccccccEEEEcccEEEcccccccHHHccccccc
Coil and Loop (DISEMBL)
MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSkglqvsgnaCDLKIRAQREKLMETVSSQFDGKLNILvssaqlpysqrkffvksrgpygsih
Flexible Loop (DISEMBL)
msdfrekrwslkgmtalvtggTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEwkskglqvsgnaCDLKIRAQREKLMETVSSQFDGKLNILVssaqlpysqrkffvksrgpygsih
Low Complexity Region (SEG)
MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSAQLPYSQRKFFVKSRGPYGSIH
Disordered region (IsUnstruct)
********WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSAQLPYSQRKFFV**********
Disordered Region (DISOPRED)
**********LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSAQLPYSQRKFFVKSRGPYGSIH
Disordered Region (DISEMBL)
********WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSAQLPYSQRKFFVKS********
Disordered Region (DISPRO)
********WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSAQLPYSQRKFFVKSRGP*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSAQLPYSQRKFFVKSRGPYGSIH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	120	2.2.26 [Sep-21-2011]
Q9ASX2	266	Tropinone reductase homol	no	no	0.866	0.390	0.549	4e-31
P50162	273	Tropinone reductase 1 OS=	N/A	no	0.825	0.362	0.636	5e-31
P50165	268	Tropinone reductase homol	N/A	no	0.858	0.384	0.552	6e-30
P50163	260	Tropinone reductase 2 OS=	N/A	no	0.783	0.361	0.574	4e-28
P50164	260	Tropinone reductase 2 OS=	N/A	no	0.783	0.361	0.574	9e-28
P16542	272	Granaticin polyketide syn	N/A	no	0.691	0.305	0.392	5e-10
Q5RCF8	278	Dehydrogenase/reductase S	yes	no	0.8	0.345	0.357	6e-09
Q9BTZ2	278	Dehydrogenase/reductase S	yes	no	0.8	0.345	0.357	6e-09
Q8SPU8	279	Dehydrogenase/reductase S	yes	no	0.8	0.344	0.346	1e-08
Q8WNV7	279	Dehydrogenase/reductase S	yes	no	0.808	0.347	0.343	4e-08

>sp|Q9ASX2|TRNH1_ARATH Tropinone reductase homolog At1g07440 OS=Arabidopsis thaliana GN=At1g07440 PE=1 SV=1

 Score =  132 bits (333), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 80/111 (72%), Gaps = 7/111 (6%)

Query: 5   REKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQV 64
           + +RWSLK  T LVTGGTKGIG+A+VEE A FGA++HTC+RNE ELN+ + +W+ KG QV
Sbjct: 6   QSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQV 65

Query: 65  SGNACDLKIRAQREKLMETVSSQFDGKLNILV-------SSAQLPYSQRKF 108
           +G+ CD  +R +REKLM+TVSS F GKL+IL+       S   L Y+   F
Sbjct: 66  TGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDF 116

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|P50162|TRN1_DATST Tropinone reductase 1 OS=Datura stramonium GN=TR1 PE=1 SV=1

 Score =  132 bits (333), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 63/99 (63%), Positives = 79/99 (79%)

Query: 1   MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
           M+   E RWSLKG TALVTGG+KGIGYA+VEELA  GA V+TCSRNE EL++ ++ W+ K
Sbjct: 9   MNCNNEGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK 68

Query: 61  GLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           GL V G+ CDL  R +R+KLM+TV+  FDGKLNILV++A
Sbjct: 69  GLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNA 107

Catalyzes the stereospecific reduction of tropinone to tropine.

Datura stramonium (taxid: 4076)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 0

EC: 6

>sp|P50165|TRNH_DATST Tropinone reductase homolog OS=Datura stramonium PE=2 SV=1

 Score =  129 bits (323), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 58/105 (55%), Positives = 84/105 (80%), Gaps = 2/105 (1%)

Query: 6   EKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVS 65
           ++RWSL+GMTALVTGGT+GIGYA+VEELA FGA V+TCSR++ +L++ +++W+ KG +VS
Sbjct: 10  DRRWSLRGMTALVTGGTRGIGYAIVEELANFGAEVYTCSRSQNDLDECLEKWRRKGFKVS 69

Query: 66  GNACDLKIRAQREKLMETVSSQFDGKLNILVSSA--QLPYSQRKF 108
           G  CD+   +QR+ LME+V+S F+GKLNIL+++A   +P     F
Sbjct: 70  GPVCDVSSISQRQTLMESVTSSFNGKLNILINNAGTTIPKEATNF 114

Datura stramonium (taxid: 4076)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P50163|TRN2_DATST Tropinone reductase 2 OS=Datura stramonium GN=TR2 PE=1 SV=1

 Score =  123 bits (308), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 54/94 (57%), Positives = 76/94 (80%)

Query: 8   RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGN 67
           RW+L+G TALVTGG++GIGY +VEELA+ GA V+TCSRN+ ELN  + +W+SKG +V  +
Sbjct: 4   RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEAS 63

Query: 68  ACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL 101
            CDL  R++R++LM TV++ F GKLNILV++A +
Sbjct: 64  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGI 97

Catalyzes the stereospecific reduction of tropinone to pseudotropine.

Datura stramonium (taxid: 4076)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 6

>sp|P50164|TRN2_HYONI Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 PE=2 SV=1

 Score =  122 bits (305), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 54/94 (57%), Positives = 75/94 (79%)

Query: 8   RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGN 67
           RW+L+G TALVTGG++GIGY +VEELA  GA V+TCSRN+ EL++ + +W+SKG  V  +
Sbjct: 4   RWNLEGCTALVTGGSRGIGYGIVEELANLGASVYTCSRNQKELDECLTQWRSKGFNVEAS 63

Query: 68  ACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL 101
            CDL  R++RE+ M+TVS+ F GKLNILV++A +
Sbjct: 64  VCDLSSRSEREEFMKTVSNHFHGKLNILVNNAGI 97

Catalyzes the stereospecific reduction of tropinone to pseudotropine.

Hyoscyamus niger (taxid: 4079)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 6

>sp|P16542|DHK1_STRVN Granaticin polyketide synthase putative ketoacyl reductase 1 OS=Streptomyces violaceoruber GN=gra-orf5 PE=3 SV=1

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)

Query: 16  ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRA 75
           ALVTG T GIG A+   LAA GA    C+R+E  L Q ++E + +G  V G  CD+   A
Sbjct: 20  ALVTGATSGIGLAIARRLAALGARTFLCARDEERLAQTVKELRGEGFDVDGTVCDVADPA 79

Query: 76  QREKLMETVSSQFDGKLNILVSSA 99
           Q    +     ++ G ++ILV++A
Sbjct: 80  QIRAYVAAAVQRY-GTVDILVNNA 102

Streptomyces violaceoruber (taxid: 1935)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q5RCF8|DHRS4_PONAB Dehydrogenase/reductase SDR family member 4 OS=Pongo abelii GN=DHRS4 PE=2 SV=3

 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 2/98 (2%)

Query: 7   KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSG 66
           +R  L    ALVT  T GIG+A+   LA  GA V   SR +  ++Q +   + +GL V+G
Sbjct: 26  RRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTG 85

Query: 67  NACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL-PY 103
             C +     RE+L+ T + +  G ++ILVS+A + P+
Sbjct: 86  TVCHVGKAEDRERLVAT-AVKLHGGIDILVSNAAVNPF 122

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q9BTZ2|DHRS4_HUMAN Dehydrogenase/reductase SDR family member 4 OS=Homo sapiens GN=DHRS4 PE=1 SV=3

 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 2/98 (2%)

Query: 7   KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSG 66
           +R  L    ALVT  T GIG+A+   LA  GA V   SR +  ++Q +   + +GL V+G
Sbjct: 26  RRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTG 85

Query: 67  NACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL-PY 103
             C +     RE+L+ T + +  G ++ILVS+A + P+
Sbjct: 86  TVCHVGKAEDRERLVAT-AVKLHGGIDILVSNAAVNPF 122

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q8SPU8|DHRS4_BOVIN Dehydrogenase/reductase SDR family member 4 OS=Bos taurus GN=DHRS4 PE=2 SV=2

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 2/98 (2%)

Query: 7   KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSG 66
           +R  L    ALVT  T GIG+A+   LA  GA V   SR +  +++ +   K +GL V+G
Sbjct: 27  RRNPLDNKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKGEGLSVTG 86

Query: 67  NACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL-PY 103
             C +     RE+L+ T + +  G ++IL+S+A + P+
Sbjct: 87  TVCHVGKAEDRERLVAT-AVKLHGGVDILISNAAVSPF 123

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q8WNV7|DHRS4_PIG Dehydrogenase/reductase SDR family member 4 OS=Sus scrofa GN=DHRS4 PE=1 SV=2

 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 2/99 (2%)

Query: 6   EKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVS 65
           E+R  L+   ALVT  T GIG A+   LA  GA V   SR +  +++ +   + +GL V+
Sbjct: 26  ERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVT 85

Query: 66  GNACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL-PY 103
           G  C +     RE+L+  ++    G ++ILVS+A + P+
Sbjct: 86  GTVCHVGKAEDRERLV-AMAVNLHGGVDILVSNAAVNPF 123

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Sus scrofa (taxid: 9823)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	120
147779411	307	hypothetical protein VITISV_028249 [Viti	0.791	0.309	0.778	2e-37
359482090	324	PREDICTED: tropinone reductase homolog i	0.791	0.293	0.768	4e-37
224125342	260	predicted protein [Populus trichocarpa]	0.783	0.361	0.734	5e-35
388497760	266	unknown [Medicago truncatula]	0.883	0.398	0.632	2e-34
217074636	214	unknown [Medicago truncatula]	0.883	0.495	0.632	2e-34
217073322	216	unknown [Medicago truncatula]	0.933	0.518	0.607	3e-34
224125346	267	predicted protein [Populus trichocarpa]	0.816	0.367	0.673	4e-34
118485461	267	unknown [Populus trichocarpa]	0.816	0.367	0.673	4e-34
359478604	121	PREDICTED: tropinone reductase homolog A	0.875	0.867	0.666	5e-34
388496084	257	unknown [Medicago truncatula]	0.883	0.412	0.622	5e-34

>gi|147779411|emb|CAN74482.1| hypothetical protein VITISV_028249 [Vitis vinifera]

 Score =  159 bits (402), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 74/95 (77%), Positives = 85/95 (89%)

Query: 5   REKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQV 64
           R KRWSLKGMTALVTGGT+GIGYA+VEELA  GAIVHTCSRN+TELN+R+QEW+ KG +V
Sbjct: 9   RTKRWSLKGMTALVTGGTRGIGYAIVEELAELGAIVHTCSRNQTELNERLQEWEGKGFRV 68

Query: 65  SGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           SG+ CDL  RAQREKL ETVSS F+GKLNILV++A
Sbjct: 69  SGSVCDLTSRAQREKLTETVSSLFEGKLNILVNNA 103

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359482090|ref|XP_002271363.2| PREDICTED: tropinone reductase homolog isoform 1 [Vitis vinifera]

 Score =  158 bits (399), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 73/95 (76%), Positives = 85/95 (89%)

Query: 5   REKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQV 64
           R KRWSLKGMTAL+TGGT+GIGYA+VEELA  GAIVHTCSRN+TELN+R+QEW+ KG +V
Sbjct: 66  RAKRWSLKGMTALITGGTRGIGYAIVEELAELGAIVHTCSRNQTELNERLQEWEGKGFRV 125

Query: 65  SGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           SG+ CDL  RAQREKL ETVSS F+GKLNILV++A
Sbjct: 126 SGSVCDLTSRAQREKLTETVSSLFEGKLNILVNNA 160

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224125342|ref|XP_002319562.1| predicted protein [Populus trichocarpa] gi|222857938|gb|EEE95485.1| predicted protein [Populus trichocarpa]

 Score =  151 bits (381), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 69/94 (73%), Positives = 84/94 (89%)

Query: 6  EKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVS 65
          EKRWSL+GMTALVTGGTKGIGYAVV+ELAA GAIVHTC+RN+ +LN+RI+EW  KG +V+
Sbjct: 2  EKRWSLQGMTALVTGGTKGIGYAVVDELAALGAIVHTCARNQDQLNERIREWNEKGFKVT 61

Query: 66 GNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          G+ CD+   A+REKLME VSS+FDGKLNILV++A
Sbjct: 62 GSVCDVSSDAEREKLMEEVSSRFDGKLNILVNNA 95

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388497760|gb|AFK36946.1| unknown [Medicago truncatula]

 Score =  149 bits (377), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 67/106 (63%), Positives = 87/106 (82%)

Query: 1   MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
           +S F++KRWSL GMTALVTGGT+GIGYA+VEELA FGA VH C+RNE ++N+ ++EWK+K
Sbjct: 6   LSSFKDKRWSLHGMTALVTGGTRGIGYAIVEELAEFGASVHICARNEEDINKCLEEWKNK 65

Query: 61  GLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSAQLPYSQR 106
           G  V+G+ CD+    QR+KLMETVSS F GKLNILV++A  P S++
Sbjct: 66  GFNVTGSVCDILFHEQRKKLMETVSSIFQGKLNILVNNAAKPTSKK 111

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217074636|gb|ACJ85678.1| unknown [Medicago truncatula]

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 67/106 (63%), Positives = 87/106 (82%)

Query: 1   MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
           +S F++KRWSL GMTALVTGGT+GIGYA+VEELA FGA VH C+RNE ++N+ ++EWK+K
Sbjct: 6   LSSFKDKRWSLHGMTALVTGGTRGIGYAIVEELAEFGASVHICARNEEDINKCLEEWKNK 65

Query: 61  GLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSAQLPYSQR 106
           G  V+G+ CD+    QR+KLMETVSS F GKLNILV++A  P S++
Sbjct: 66  GFNVTGSVCDILFHEQRKKLMETVSSIFQGKLNILVNNAAKPTSKK 111

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217073322|gb|ACJ85020.1| unknown [Medicago truncatula]

 Score =  148 bits (374), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 68/112 (60%), Positives = 88/112 (78%)

Query: 1   MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
           +S F++KRWSL GMTALVTGGT+GIGYA+VEELA FGA VH C+RNE ++N+ ++EWK+K
Sbjct: 6   LSSFKDKRWSLHGMTALVTGGTRGIGYAIVEELAEFGAAVHVCARNEEDINKCLEEWKNK 65

Query: 61  GLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSAQLPYSQRKFFVKS 112
           G  V+G+ CD+    QR++LMETVSS F GKLNILV++A  P S +   V S
Sbjct: 66  GFNVTGSVCDILFHEQRKRLMETVSSIFHGKLNILVNNAAKPTSLKAIPVLS 117

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224125346|ref|XP_002319563.1| predicted protein [Populus trichocarpa] gi|222857939|gb|EEE95486.1| predicted protein [Populus trichocarpa]

 Score =  148 bits (373), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 85/98 (86%)

Query: 2   SDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG 61
           S  R+KRW L+GMTALVTGGTKG+GYA+VEELAA GAIVHTC+RN+ ++N+R++EWK KG
Sbjct: 5   SSSRDKRWGLQGMTALVTGGTKGLGYAIVEELAALGAIVHTCARNQDQINERVREWKEKG 64

Query: 62  LQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            +V+G+ CD+   A+REKLM+ VSS FDGKLNILV++A
Sbjct: 65  FKVTGSVCDVSSNAEREKLMKEVSSLFDGKLNILVNNA 102

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118485461|gb|ABK94587.1| unknown [Populus trichocarpa]

 Score =  148 bits (373), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 85/98 (86%)

Query: 2   SDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG 61
           S  R+KRW L+GMTALVTGGTKG+GYA+VEELAA GAIVHTC+RN+ ++N+R++EWK KG
Sbjct: 5   SSSRDKRWGLQGMTALVTGGTKGLGYAIVEELAALGAIVHTCARNQDQINERVREWKEKG 64

Query: 62  LQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            +V+G+ CD+   A+REKLM+ VSS FDGKLNILV++A
Sbjct: 65  FKVTGSVCDVSSNAEREKLMKEVSSLFDGKLNILVNNA 102

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359478604|ref|XP_003632142.1| PREDICTED: tropinone reductase homolog At1g07440-like, partial [Vitis vinifera]

 Score =  148 bits (373), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 70/105 (66%), Positives = 86/105 (81%)

Query: 8   RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGN 67
           RWSLKGMTALVTGGTKGIG+A+VEELA  GA +HTCSR ETELN+ +++WK+KG  VSG+
Sbjct: 5   RWSLKGMTALVTGGTKGIGHAIVEELAGLGATIHTCSRKETELNECLKDWKAKGFGVSGS 64

Query: 68  ACDLKIRAQREKLMETVSSQFDGKLNILVSSAQLPYSQRKFFVKS 112
            CD+  RAQREKLMETVSS F+GKLNILV++A +   +    VK+
Sbjct: 65  VCDVSSRAQREKLMETVSSVFNGKLNILVNNAAIVIQKPTVEVKA 109

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388496084|gb|AFK36108.1| unknown [Medicago truncatula]

 Score =  147 bits (372), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 66/106 (62%), Positives = 87/106 (82%)

Query: 1   MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
           +S F++KRWSL GMTALVTGGT+GIG+A+VEELA FGA VH C+RNE ++N+ ++EWK+K
Sbjct: 6   LSSFKDKRWSLHGMTALVTGGTRGIGFAIVEELAEFGASVHICARNEEDINKCLEEWKNK 65

Query: 61  GLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSAQLPYSQR 106
           G  V+G+ CD+    QR+KLMETVSS F GKLNILV++A  P S++
Sbjct: 66  GFNVTGSVCDILFHEQRKKLMETVSSIFQGKLNILVNNAAKPTSKK 111

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	120
TAIR|locus:2042982	307	AT2G29340 [Arabidopsis thalian	0.775	0.302	0.688	1.3e-31
TAIR|locus:2043052	262	AT2G29290 [Arabidopsis thalian	0.775	0.354	0.677	1.8e-30
TAIR|locus:2043037	268	AT2G29150 [Arabidopsis thalian	0.791	0.354	0.666	3.8e-30
TAIR|locus:2043027	262	AT2G29310 [Arabidopsis thalian	0.775	0.354	0.666	6.2e-30
TAIR|locus:2025072	266	AT1G07440 [Arabidopsis thalian	0.783	0.353	0.606	1.3e-29
TAIR|locus:2152815	264	AT5G06060 [Arabidopsis thalian	0.775	0.352	0.655	5.6e-29
TAIR|locus:2043152	268	AT2G29370 [Arabidopsis thalian	0.766	0.343	0.666	1.2e-28
TAIR|locus:2043197	107	AT2G29170 [Arabidopsis thalian	0.791	0.887	0.645	1.9e-28
TAIR|locus:2043177	269	SAG13 "senescence-associated g	0.758	0.338	0.670	1.9e-28
TAIR|locus:2043167	271	AT2G29360 [Arabidopsis thalian	0.783	0.346	0.631	3.9e-28

TAIR|locus:2042982 AT2G29340 [Arabidopsis thaliana (taxid:3702)]

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 64/93 (68%), Positives = 77/93 (82%)

Query:     6 EKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVS 65
             +KRWSLKGMTALVTGG  GIGYA+VEELA FGA +H C  +E +LNQ + EW+ KG QVS
Sbjct:     2 DKRWSLKGMTALVTGGASGIGYAIVEELAGFGARIHVCDISEAKLNQSLSEWEKKGFQVS 61

Query:    66 GNACDLKIRAQREKLMETVSSQFDGKLNILVSS 98
             G+ CD+  R +RE+LM+TVSSQFDGKLNILVS+
Sbjct:    62 GSVCDVASRPEREELMQTVSSQFDGKLNILVSN 94

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2043052 AT2G29290 [Arabidopsis thaliana (taxid:3702)]

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 63/93 (67%), Positives = 79/93 (84%)

Query:     6 EKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVS 65
             +KRWSL+GM ALVTGGTKGIG AVVEEL+  GA VHTC+R+ET+L +R++EW+ KG QV+
Sbjct:     2 DKRWSLQGMNALVTGGTKGIGEAVVEELSILGARVHTCARDETQLQERLREWQEKGFQVT 61

Query:    66 GNACDLKIRAQREKLMETVSSQFDGKLNILVSS 98
              + CD+ +R QREKLMETVSS F GKLNILV++
Sbjct:    62 TSICDVSLREQREKLMETVSSLFQGKLNILVNN 94

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2043037 AT2G29150 [Arabidopsis thaliana (taxid:3702)]

 Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
 Identities = 64/96 (66%), Positives = 82/96 (85%)

Query:     5 REK-RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ 63
             R+K RWSL+GMTALVTGG+KG+G AVVEELA  GA VHTC+R+ET+L +R++EW++KG +
Sbjct:     9 RDKSRWSLEGMTALVTGGSKGLGEAVVEELAMLGARVHTCARDETQLQERLREWQAKGFE 68

Query:    64 VSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
             V+ + CD+  R QREKLMETVSS F GKLNILV++A
Sbjct:    69 VTTSVCDVSSREQREKLMETVSSVFQGKLNILVNNA 104

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2043027 AT2G29310 [Arabidopsis thaliana (taxid:3702)]

 Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
 Identities = 62/93 (66%), Positives = 76/93 (81%)

Query:     6 EKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVS 65
             +KRWSL+GMTALVTG   GIGYA+VEELA+FGAI+H C  +ET L+Q + EW+ KG QVS
Sbjct:     2 DKRWSLQGMTALVTGAASGIGYAIVEELASFGAIIHICDISETLLSQSLSEWEKKGFQVS 61

Query:    66 GNACDLKIRAQREKLMETVSSQFDGKLNILVSS 98
             G+ CD+  R  REKLM+TVSS FDGKLNILV++
Sbjct:    62 GSICDVASRPDREKLMQTVSSLFDGKLNILVNN 94

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2025072 AT1G07440 [Arabidopsis thaliana (taxid:3702)]

 Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
 Identities = 57/94 (60%), Positives = 77/94 (81%)

Query:     5 REKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQV 64
             + +RWSLK  T LVTGGTKGIG+A+VEE A FGA++HTC+RNE ELN+ + +W+ KG QV
Sbjct:     6 QSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQV 65

Query:    65 SGNACDLKIRAQREKLMETVSSQFDGKLNILVSS 98
             +G+ CD  +R +REKLM+TVSS F GKL+IL+++
Sbjct:    66 TGSVCDASLRPEREKLMQTVSSMFGGKLDILINN 99

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0080167 "response to karrikin" evidence=IEP

GO:0000023 "maltose metabolic process" evidence=RCA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0043085 "positive regulation of catalytic activity" evidence=RCA

TAIR|locus:2152815 AT5G06060 [Arabidopsis thaliana (taxid:3702)]

 Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
 Identities = 61/93 (65%), Positives = 74/93 (79%)

Query:     6 EKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVS 65
             +KRWSL G TALVTGGT+GIG AVVEELA FGA VHTCSRN+ ELN  + +WK+ GL VS
Sbjct:     4 DKRWSLAGKTALVTGGTRGIGRAVVEELAKFGAKVHTCSRNQEELNACLNDWKANGLVVS 63

Query:    66 GNACDLKIRAQREKLMETVSSQFDGKLNILVSS 98
             G+ CD  +R QREKL++  SS F GKLNIL+++
Sbjct:    64 GSVCDASVRDQREKLIQEASSAFSGKLNILINN 96

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2043152 AT2G29370 [Arabidopsis thaliana (taxid:3702)]

 Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 62/93 (66%), Positives = 79/93 (84%)

Query:     5 REK-RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ 63
             R+K +WSL+GMTALVTGG+KG+G AVVEELA  GA VHTC+R+ET+L + ++EW++KGLQ
Sbjct:     9 RDKPKWSLEGMTALVTGGSKGLGKAVVEELAMLGARVHTCARDETQLQESLREWQAKGLQ 68

Query:    64 VSGNACDLKIRAQREKLMETVSSQFDGKLNILV 96
             V+ + CD+  R QREKLMETVSS F GKL+ILV
Sbjct:    69 VTTSVCDVSSRDQREKLMETVSSLFQGKLSILV 101

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2043197 AT2G29170 [Arabidopsis thaliana (taxid:3702)]

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 62/96 (64%), Positives = 78/96 (81%)

Query:     3 DFREK-RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG 61
             + R+K RWSL GMTALVTGG+KG+G AVVEELA  GA VHTC+RNET+L + ++EW++KG
Sbjct:     7 NLRDKCRWSLGGMTALVTGGSKGLGEAVVEELAMLGARVHTCARNETQLQECVREWQAKG 66

Query:    62 LQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVS 97
              +V+ + CD+  R QREKLME V+S F GKLNILVS
Sbjct:    67 FEVTTSVCDVSSRDQREKLMENVASIFQGKLNILVS 102

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2043177 SAG13 "senescence-associated gene 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 61/91 (67%), Positives = 76/91 (83%)

Query:     8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGN 67
             RWSL GMTALVTGG+KGIG AVVEELA  GA VHTC+R+ET+L +R++EW++KG QV+ +
Sbjct:    12 RWSLGGMTALVTGGSKGIGEAVVEELAMLGAKVHTCARDETQLQERLREWQAKGFQVTTS 71

Query:    68 ACDLKIRAQREKLMETVSSQFDGKLNILVSS 98
              CD+  R QR KLMETVSS + GKLNILV++
Sbjct:    72 VCDVSSRDQRVKLMETVSSLYQGKLNILVNN 102

GO:0000166 "nucleotide binding" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0007568 "aging" evidence=IEP;RCA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=TAS

GO:0002213 "defense response to insect" evidence=IEP

TAIR|locus:2043167 AT2G29360 [Arabidopsis thaliana (taxid:3702)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 60/95 (63%), Positives = 80/95 (84%)

Query:     5 REK-RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ 63
             R+K RWSL GMTALVTGG+KGIG AVVEELA  GA +HTC+R+ET+L + +++W++KG Q
Sbjct:     9 RDKPRWSLVGMTALVTGGSKGIGEAVVEELATLGARIHTCARDETQLQESLRKWQAKGFQ 68

Query:    64 VSGNACDLKIRAQREKLMETVSSQFDGKLNILVSS 98
             V+ + CD+  R +REKLMETVS+ F+GKLNILV++
Sbjct:    69 VTTSVCDVSSRDKREKLMETVSTIFEGKLNILVNN 103

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0015979 "photosynthesis" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	120
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	7e-46
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	3e-20
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	2e-17
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-17
cd05233	234	cd05233, SDR_c, classical (c) SDRs	9e-17
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	2e-15
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	7e-15
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	2e-14
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	3e-14
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	3e-14
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	4e-14
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	4e-14
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	4e-14
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	5e-14
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	1e-13
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	1e-13
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	1e-13
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	2e-13
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	3e-13
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	3e-13
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-13
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	1e-12
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-12
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	5e-12
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	5e-12
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-11
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	2e-11
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-11
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	4e-11
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	8e-11
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	1e-10
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	1e-10
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	1e-10
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-10
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	2e-10
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	2e-10
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	3e-10
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	3e-10
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	4e-10
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	5e-10
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	6e-10
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	1e-09
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	1e-09
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	2e-09
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	2e-09
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	2e-09
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-09
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-09
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	2e-09
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	3e-09
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	3e-09
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	3e-09
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	5e-09
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	6e-09
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	8e-09
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	8e-09
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	9e-09
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	1e-08
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	1e-08
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	1e-08
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	1e-08
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	1e-08
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	2e-08
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	2e-08
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	2e-08
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	2e-08
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	3e-08
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	3e-08
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	3e-08
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	4e-08
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	4e-08
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	4e-08
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	5e-08
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	5e-08
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	5e-08
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	6e-08
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	7e-08
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	8e-08
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	8e-08
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	1e-07
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	1e-07
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	1e-07
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	2e-07
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	2e-07
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	2e-07
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	3e-07
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	5e-07
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	5e-07
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	6e-07
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	8e-07
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	1e-06
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	1e-06
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	1e-06
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	1e-06
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	1e-06
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-06
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	2e-06
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	2e-06
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	2e-06
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	2e-06
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	2e-06
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	2e-06
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	3e-06
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	4e-06
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	5e-06
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	5e-06
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	6e-06
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	7e-06
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	7e-06
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	7e-06
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	8e-06
pfam08659	181	pfam08659, KR, KR domain	9e-06
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	9e-06
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	1e-05
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	1e-05
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	2e-05
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	2e-05
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	2e-05
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	2e-05
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	2e-05
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	2e-05
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	2e-05
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	2e-05
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-05
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	2e-05
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	3e-05
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	3e-05
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	3e-05
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	3e-05
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-05
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	4e-05
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	4e-05
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	4e-05
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	4e-05
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	5e-05
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	6e-05
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	7e-05
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	8e-05
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	8e-05
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	1e-04
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	1e-04
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	1e-04
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	2e-04
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	2e-04
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	2e-04
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	3e-04
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	3e-04
PRK08303	305	PRK08303, PRK08303, short chain dehydrogenase; Pro	3e-04
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	3e-04
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	4e-04
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	4e-04
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	4e-04
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	4e-04
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	5e-04
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	5e-04
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	6e-04
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-04
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	6e-04
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	7e-04
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	7e-04
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	7e-04
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	8e-04
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	8e-04
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	8e-04
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	8e-04
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	9e-04
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	0.001
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	0.002
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	0.002
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	0.002
cd05237	287	cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l	0.002
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	0.002
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	0.002
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	0.002
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	0.002
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	0.003
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	0.003
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	0.003
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.003
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	0.003
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	0.003
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	0.004

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score =  148 bits (375), Expect = 7e-46
 Identities = 56/92 (60%), Positives = 77/92 (83%)

Query: 8  RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGN 67
          RW+L+G TALVTGGTKGIGYA+VEELA  GA V+TC+RN+ EL++ + EW+ KG +V G+
Sbjct: 1  RWNLEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGS 60

Query: 68 ACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           CD+  R++R++LM+TV+S F GKLNILV++A
Sbjct: 61 VCDVSSRSERQELMDTVASHFGGKLNILVNNA 92

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 82.1 bits (203), Expect = 3e-20
 Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 3/94 (3%)

Query: 8  RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVS 65
          RW L G TAL+TG +KGIG A+  E    GA V   +R+   L Q   E   +    +V 
Sbjct: 4  RWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVH 63

Query: 66 GNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          G A D+     R  +++ V   +DG L+ILV++A
Sbjct: 64 GLAADVSDDEDRRAILDWVEDHWDG-LHILVNNA 96

Length = 257

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 74.3 bits (183), Expect = 2e-17
 Identities = 35/90 (38%), Positives = 57/90 (63%), Gaps = 2/90 (2%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
          SLKG  AL+TGG+KGIG+A+ E L A G  V   +R++ EL +   E  +KG  V G A 
Sbjct: 3  SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKG-NVLGLAA 61

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D++  A  ++ ++ + + F G L++L+++A
Sbjct: 62 DVRDEADVQRAVDAIVAAF-GGLDVLIANA 90

Length = 237

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 72.5 bits (179), Expect = 9e-17
 Identities = 34/90 (37%), Positives = 46/90 (51%), Gaps = 1/90 (1%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
          SL+G TALVTG ++GIG A+   LAA GA V     NE        E ++ G +      
Sbjct: 2  SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVF 61

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D+   A    L+E     F G L+ILV++A
Sbjct: 62 DVSDEAAVRALIEAAVEAF-GALDILVNNA 90

Length = 246

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score = 72.3 bits (178), Expect = 9e-17
 Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 2/84 (2%)

Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRA 75
          ALVTG + GIG A+   LA  GA V    RNE  L   +   ++ G        D+    
Sbjct: 1  ALVTGASSGIGRAIARRLAREGAKVVLADRNEEAL-AELAAIEALGGNAVAVQADVSDEE 59

Query: 76 QREKLMETVSSQFDGKLNILVSSA 99
            E L+E    +F G+L+ILV++A
Sbjct: 60 DVEALVEEALEEF-GRLDILVNNA 82

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 69.1 bits (169), Expect = 2e-15
 Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 5/94 (5%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKG-LQVSG 66
           L G  ALVTG + GIG A+   LA  GA  +V      E          K  G  + + 
Sbjct: 2  DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAA 61

Query: 67 NACDL-KIRAQREKLMETVSSQFDGKLNILVSSA 99
           A D+       E L+     +F G+++ILV++A
Sbjct: 62 VAADVSDDEESVEALVAAAEEEF-GRIDILVNNA 94

Length = 251

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 68.0 bits (166), Expect = 7e-15
 Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 1/94 (1%)

Query: 6  EKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVS 65
           +R  L    ALVT  T GIG A+   LA  GA V   SR +  +++ +   + +GL V+
Sbjct: 3  TRRDPLANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVT 62

Query: 66 GNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          G  C +     RE+L+ T  +   G ++ILVS+A
Sbjct: 63 GTVCHVGKAEDRERLVATAVNLH-GGVDILVSNA 95

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 66.4 bits (162), Expect = 2e-14
 Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 1/85 (1%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR 74
           ALVTG T GIG A+   L   G  V  C+R E  L   ++E +  G++  G  CD++  
Sbjct: 5  VALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRTCDVRSV 64

Query: 75 AQREKLMETVSSQFDGKLNILVSSA 99
           + E L+    +++ G +++LV++A
Sbjct: 65 PEIEALVAAAVARY-GPIDVLVNNA 88

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 66.1 bits (162), Expect = 3e-14
 Identities = 29/85 (34%), Positives = 50/85 (58%), Gaps = 2/85 (2%)

Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRI-QEWKSKGLQVSGNACDLKIR 74
          ALVTG ++GIG A+  +LA  GA V    R+  E  + + +E K+ G++  G  CD+  R
Sbjct: 1  ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR 60

Query: 75 AQREKLMETVSSQFDGKLNILVSSA 99
             + ++E +  +  G ++ILV++A
Sbjct: 61 EDVKAVVEEIEEEL-GPIDILVNNA 84

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 65.8 bits (161), Expect = 3e-14
 Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLK 72
          G  ALVT  + GIG A+   LA  GA V  C+RN   L +   E ++ G  V     DL 
Sbjct: 1  GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAVVADLT 60

Query: 73 IRAQREKLMETVSSQFDGKLNILVSSA 99
               ++L+E     F G+++ILV++A
Sbjct: 61 DPEDIDRLVEKAGDAF-GRVDILVNNA 86

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 64.1 bits (157), Expect = 4e-14
 Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETE--LNQRIQEWKSKGLQVSGNACDL 71
          T L+TGGT G+G A+   LAA GA  +   SR        + + E ++ G +V+  ACD+
Sbjct: 2  TVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACDV 61

Query: 72 KIRAQREKLMETVSSQFDGKLNILVSSA 99
            R     L+  + +   G L+ +V +A
Sbjct: 62 ADRDALAALLAALPAAL-GPLDGVVHNA 88

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 65.8 bits (161), Expect = 4e-14
 Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 3/90 (3%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           L G+  LVTGG  GIG A+ E  A  GA VH C  +E  L          G +V+    
Sbjct: 8  PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAAR--LPGAKVTATVA 65

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D+   AQ E++ +T   +F G L++LV++A
Sbjct: 66 DVADPAQVERVFDTAVERFGG-LDVLVNNA 94

Length = 264

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 65.7 bits (161), Expect = 4e-14
 Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 1/89 (1%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          LKG  ALVTG   GIG  +   LA  GA V     N+       +  +  G +  G A D
Sbjct: 2  LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMD 61

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +         ++     F G ++ILV++A
Sbjct: 62 VTDEEAINAGIDYAVETF-GGVDILVNNA 89

Length = 258

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 66.5 bits (163), Expect = 5e-14
 Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 1/95 (1%)

Query: 5   REKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQV 64
           R+ R  L G   L+TG + GIG A   ++A  GA V   +RN   L++ + E ++KG   
Sbjct: 363 RDLRGPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTA 422

Query: 65  SGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
               CDL   A  +  ++ + ++    ++ LV++A
Sbjct: 423 HAYTCDLTDSAAVDHTVKDILAEHGH-VDYLVNNA 456

Length = 657

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 64.1 bits (156), Expect = 1e-13
 Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 4/84 (4%)

Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRA 75
          ALVTG ++GIG A    L A G  V  C+R+E  L     +       V G A D++  A
Sbjct: 3  ALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELEG---VLGLAGDVRDEA 59

Query: 76 QREKLMETVSSQFDGKLNILVSSA 99
             + ++ +   F G L+ LV++A
Sbjct: 60 DVRRAVDAMEEAFGG-LDALVNNA 82

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 64.3 bits (157), Expect = 1e-13
 Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 1/90 (1%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
          SLKG  ALVTG ++GIG+ +   LA  GA +   SRNE +  +  Q  + +G++ +   C
Sbjct: 2  SLKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTC 61

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D+      +  +E +   F GK++ILV++A
Sbjct: 62 DVSDEEAIKAAVEAIEEDF-GKIDILVNNA 90

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 63.9 bits (156), Expect = 1e-13
 Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 7/100 (7%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
            L G T L+TGGT GIG A+  +    G  V    R E  L +  +E  +    V     
Sbjct: 2   KLTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKELPNIHTIV----L 57

Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSA--QLPYSQRK 107
           D+      E L E + S++   L+IL+++A  Q P   R 
Sbjct: 58  DVGDAESVEALAEALLSEYP-NLDILINNAGIQRPIDLRD 96

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 63.8 bits (156), Expect = 2e-13
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 1/90 (1%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           L+G  ALVTG  +GIG A+   LAA GA V        +     +  ++ G +      
Sbjct: 3  DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQV 62

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D++ RA  +  +      F G+L+ILV++A
Sbjct: 63 DVRDRAALKAAVAAGVEDF-GRLDILVANA 91

Length = 251

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 63.0 bits (154), Expect = 3e-13
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           L G   LVTGGT+GIG  +     A GA V  C R   E           G     +A 
Sbjct: 3  DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TVDGRPAEFHAA 54

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D++   Q   L++ +  +  G+L++LV++A
Sbjct: 55 DVRDPDQVAALVDAIVERH-GRLDVLVNNA 83

Length = 252

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 63.0 bits (154), Expect = 3e-13
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 1/89 (1%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          L G TALVTGG++G+G  + E L   GA V   +R   EL +     ++ G+     A D
Sbjct: 10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAAD 69

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +   A  E+L E    +F G ++ILV++A
Sbjct: 70 VADEADIERLAEETLERF-GHVDILVNNA 97

Length = 259

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 62.6 bits (153), Expect = 6e-13
 Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 4/91 (4%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
          L G  A+VTG + GIG A+ E LA  GA  ++     NE    + ++E K +G       
Sbjct: 3  LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAY-DINEEAAQELLEEIKEEGGDAIAVK 61

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           D+      E L+E +  +F GK++ILV++A
Sbjct: 62 ADVSSEEDVENLVEQIVEKF-GKIDILVNNA 91

Length = 247

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 61.4 bits (150), Expect = 1e-12
 Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 1/85 (1%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR 74
           ALVTG ++GIG A+   LAA GA V    R+E    + ++E K+ G   +    D+  R
Sbjct: 2  VALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSDR 61

Query: 75 AQREKLMETVSSQFDGKLNILVSSA 99
             E L+E V ++F G ++ILV++A
Sbjct: 62 EAVEALVEKVEAEF-GPVDILVNNA 85

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 60.5 bits (147), Expect = 3e-12
 Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 1/90 (1%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
          SL+G  AL+TG  +GIG AV   LA  G  V   +R E  L    +E ++ G++V     
Sbjct: 4  SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATA 63

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D+    +    +E + ++  G ++IL+++A
Sbjct: 64 DVSDYEEVTAAIEQLKNEL-GSIDILINNA 92

Length = 239

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 59.9 bits (146), Expect = 5e-12
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 2/90 (2%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL-QVSGNAC 69
          LKG  A +TGG  GIG A+ +  A  GA V    R    L    +E  S    +     C
Sbjct: 1  LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQC 60

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D++     E  ++    +F GK++IL+++A
Sbjct: 61 DVRDPEAVEAAVDETLKEF-GKIDILINNA 89

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 59.6 bits (145), Expect = 5e-12
 Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 2/86 (2%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETELNQRIQEWKSKGLQVSGNACDLKI 73
           ALVTG  +GIG+ +V +LA  G   V   +R+       +++ +++GL V  +  D+  
Sbjct: 2  VALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVTD 61

Query: 74 RAQREKLMETVSSQFDGKLNILVSSA 99
           A  E   + V  ++ G L+ILV++A
Sbjct: 62 DASIEAAADFVEEKY-GGLDILVNNA 86

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 58.7 bits (143), Expect = 1e-11
 Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 4/92 (4%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGN 67
          SL G  ALVTG  +G+G A+   LA  GA  +VH    +E    + ++  ++ G +    
Sbjct: 3  SLMGRVALVTGAARGLGRAIALRLARAGADVVVH-YRSDEEAAEELVEAVEALGRRAQAV 61

Query: 68 ACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            D+  +A  E  +     +F G+++ILV++A
Sbjct: 62 QADVTDKAALEAAVAAAVERF-GRIDILVNNA 92

Length = 249

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 58.5 bits (142), Expect = 2e-11
 Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 3/91 (3%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE--WKSKGLQVSGNA 68
          L+G  A+VTGG+ GIG A VE L   GA V  C R+E  L         K  G ++    
Sbjct: 6  LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAAR 65

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          CD+   A        V ++F G +++LV++A
Sbjct: 66 CDVLDEADVAAFAAAVEARF-GGVDMLVNNA 95

Length = 265

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 57.9 bits (141), Expect = 3e-11
 Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 2/91 (2%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVH-TCSRNETELNQRIQEWKSKGLQVSGNA 68
          SL+G  ALVTG ++GIG A+ E LAA GA V    + +E      + E  + G +     
Sbjct: 2  SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQ 61

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           D+      E+ ++   ++F G ++ILV++A
Sbjct: 62 GDVSDAESVERAVDEAKAEF-GGVDILVNNA 91

Length = 248

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 57.7 bits (140), Expect = 4e-11
 Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
          +L G  ALVTG  +G+G A  E LA  GA V        E  +     ++ G +    A 
Sbjct: 4  NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAA 63

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          DL   A  ++  +  ++   G L+ LV++A
Sbjct: 64 DLADPASVQRFFDAAAAAL-GGLDGLVNNA 92

Length = 250

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 56.6 bits (137), Expect = 8e-11
 Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 1/92 (1%)

Query: 8  RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGN 67
          R+SL G  ALVTG  +G+G+ +   LA  GA V    RN   L   +   ++ G      
Sbjct: 6  RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEAL 65

Query: 68 ACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          A D+            + ++  G+L+ILV++ 
Sbjct: 66 AFDIADEEAVAAAFARIDAEH-GRLDILVNNV 96

Length = 256

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 56.5 bits (137), Expect = 1e-10
 Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 11/93 (11%)

Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNA---- 68
          G   ++TG   GIG     ELA  GA V    RNE     + +E  ++  + +GNA    
Sbjct: 1  GKVVVITGANSGIGKETARELAKRGAHVIIACRNEE----KGEEAAAEIKKETGNAKVEV 56

Query: 69 --CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
             DL   A   +  E   ++F  +L+IL+++A
Sbjct: 57 IQLDLSSLASVRQFAEEFLARFP-RLDILINNA 88

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 56.2 bits (136), Expect = 1e-10
 Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 1/90 (1%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
          SLKG  AL+TG + GIG+A+ +  A  GA +     N+  +++ +  ++  G++  G  C
Sbjct: 7  SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVC 66

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D+      + ++  +  +  G ++ILV++A
Sbjct: 67 DVTDEDGVQAMVSQIEKEV-GVIDILVNNA 95

Length = 265

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 55.9 bits (135), Expect = 1e-10
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 5/90 (5%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
             G T L+TGG  GIG A+ +     G  V  C RNE  L +   E       +    C
Sbjct: 2  KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPE----IHTEVC 57

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D+  R  R +L+E +  ++   LN+L+++A
Sbjct: 58 DVADRDSRRELVEWLKKEYP-NLNVLINNA 86

Length = 245

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 56.0 bits (136), Expect = 2e-10
 Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 2/89 (2%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          L+G  A+VTG + GIG  +    AA GA V    RNE    +   E  + G +    A D
Sbjct: 3  LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGG-RAIAVAAD 61

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +   A  E  +     +F G ++ILV++A
Sbjct: 62 VSDEADVEAAVAAALERF-GSVDILVNNA 89

Length = 251

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 55.7 bits (135), Expect = 2e-10
 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 8/93 (8%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNET--ELNQRIQEWKSKGLQVSG 66
          L G  ALVTG ++GIG A+ + LA  GA  +V+  S      E+   I+    K + V  
Sbjct: 1  LAGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAGGKAIAVQA 60

Query: 67 NACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +  D    +Q  +L +     F G ++ILV++A
Sbjct: 61 DVSDP---SQVARLFDAAEKAF-GGVDILVNNA 89

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 55.8 bits (135), Expect = 2e-10
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 1/87 (1%)

Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLK 72
          G   ++TG ++GIG A+   LA  GA +   +RNET L    QE    G +      D+ 
Sbjct: 1  GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVS 60

Query: 73 IRAQREKLMETVSSQFDGKLNILVSSA 99
               E+L+E   ++F G ++ILV++A
Sbjct: 61 DAEACERLIEAAVARF-GGIDILVNNA 86

Length = 263

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 55.5 bits (134), Expect = 3e-10
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 1/90 (1%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET-ELNQRIQEWKSKGLQVSGNAC 69
          L G  ALVTG ++GIG  +  +L   GA V+   R    +L    +E +++G +     C
Sbjct: 1  LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIPVRC 60

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D     + E L E V+ +  G+L+ILV++A
Sbjct: 61 DHSDDDEVEALFERVAREQQGRLDILVNNA 90

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 55.1 bits (133), Expect = 3e-10
 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 13/101 (12%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN------------QRIQEWK 58
           L G  A VTG ++GIG A+   LA  GA V   ++  +E +            +  +E +
Sbjct: 1   LSGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIE 60

Query: 59  SKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           + G Q      D++   Q   L+E    QF G+L+ILV++A
Sbjct: 61  AAGGQALPIVVDVRDEDQVRALVEATVDQF-GRLDILVNNA 100

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 54.7 bits (132), Expect = 4e-10
 Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 10/103 (9%)

Query: 1  MSD--FREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK 58
          M+D    +  + L G  A+VTGG  GIG+A+ E  AA GA V    R+E      + E  
Sbjct: 1  MTDTKQFDLAFDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSED-----VAEVA 55

Query: 59 SK--GLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          ++  G    G  CD+      E  +  V S F G+++ILV+SA
Sbjct: 56 AQLLGGNAKGLVCDVSDSQSVEAAVAAVISAF-GRIDILVNSA 97

Length = 255

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 54.5 bits (132), Expect = 5e-10
 Identities = 25/49 (51%), Positives = 28/49 (57%), Gaps = 4/49 (8%)

Query: 1  MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE 49
          MS F E    L G  ALVTGGTKGIG A V  L   GA V T +R+  +
Sbjct: 1  MSFFLE----LAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPD 45

Length = 260

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 54.2 bits (131), Expect = 6e-10
 Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 1/84 (1%)

Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRA 75
           LVTG  +GIGYAV   LA  GA V    RN  +L + + + +  G   +    D+   A
Sbjct: 1  VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSA 60

Query: 76 QREKLMETVSSQFDGKLNILVSSA 99
            +++++ +  ++ G +++LV+ A
Sbjct: 61 AVDEVVQRLEREY-GPIDVLVNVA 83

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 53.9 bits (130), Expect = 1e-09
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 6/90 (6%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGNAC 69
          L G   L+TG +KGIG A  E  AA G  +H  +R+   L     + ++  G+ V+ +A 
Sbjct: 5  LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHAL 64

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          DL     RE+L         G ++ILV++A
Sbjct: 65 DLSSPEAREQLAAEA-----GDIDILVNNA 89

Length = 259

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 53.5 bits (129), Expect = 1e-09
 Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 1/90 (1%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           L G  ALVTG ++GIG A+ + LA  GA V   SR             + G +    AC
Sbjct: 5  DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALAC 64

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           +    Q + L   +  +  G+L+ILV++A
Sbjct: 65 HIGEMEQIDALFAHIRERH-GRLDILVNNA 93

Length = 252

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 53.0 bits (128), Expect = 2e-09
 Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 1/90 (1%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
          SLKG  A++TGG   +G A+ +ELA  GA V    RN+ +    + E K+ G +      
Sbjct: 7  SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKA 66

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D+  +   E+  + +   F G  +IL++ A
Sbjct: 67 DVLDKESLEQARQQILEDF-GPCDILINGA 95

Length = 278

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 53.0 bits (128), Expect = 2e-09
 Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 2/90 (2%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGNAC 69
          +KG TAL+TG + GIG  + ++LA  G  +   +R E +L    +E + K G++V     
Sbjct: 4  MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPA 63

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          DL      E+L + +  +  G +++LV++A
Sbjct: 64 DLSDPEALERLEDELKERG-GPIDVLVNNA 92

Length = 265

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 52.8 bits (127), Expect = 2e-09
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR 74
           ALVTGG +GIG  + E LA  G  V     NE    +  +E    G +      D+  +
Sbjct: 2  VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDK 61

Query: 75 AQREKLMETVSSQFDGKLNILVSSA 99
           Q    ++  + +F G  +++V++A
Sbjct: 62 DQVFSAIDQAAEKF-GGFDVMVNNA 85

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 52.9 bits (127), Expect = 2e-09
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 12/96 (12%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFG---AIVHTCSRNETELNQRIQEWKSKGLQVSGN 67
            KG  AL+TGGT+GIG A+ E     G   A+++  + NE +      E + KG+     
Sbjct: 5   FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAK------ELREKGVFTI-- 56

Query: 68  ACDLKIRAQREKLMETVSSQFDGKLNILVSSAQLPY 103
            CD+  R Q +K  E V  +F G++++LV++A + Y
Sbjct: 57  KCDVGNRDQVKKSKEVVEKEF-GRVDVLVNNAGIMY 91

Length = 255

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 52.7 bits (127), Expect = 2e-09
 Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 1/89 (1%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          LK    ++TGG +G+G A+ E LA  GA +     N+ +L + + E  + G +V G A +
Sbjct: 3  LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAAN 62

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +      E     ++  F G+LN L+++A
Sbjct: 63 VTDEEDVEATFAQIAEDF-GQLNGLINNA 90

Length = 253

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 52.6 bits (127), Expect = 2e-09
 Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 9/93 (9%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE---TELNQRIQEWKSKGLQVSG 66
          +LKG  AL+TG + GIG A    LA  GA V   +R E     L   I    +  L +  
Sbjct: 3  TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALAL-- 60

Query: 67 NACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
             D+  RA  E  +E +  +F G+++ILV++A
Sbjct: 61 ---DVTDRAAVEAAIEALPEEF-GRIDILVNNA 89

Length = 246

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 52.5 bits (126), Expect = 3e-09
 Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 1/90 (1%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
          SLK   A++TGGT  +G A+   LA  GA V    RN+ + ++  +E  + G +    A 
Sbjct: 2  SLKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIALAA 61

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D+  RA  E+  E + +QF G ++IL++ A
Sbjct: 62 DVLDRASLERAREEIVAQF-GTVDILINGA 90

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 52.3 bits (126), Expect = 3e-09
 Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 8/102 (7%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE----TELNQRIQEWKSKGLQVSG 66
           LKG  AL+TGG  GIG AV    A  GA +     +E     E  QR+++   K L + G
Sbjct: 44  LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPG 103

Query: 67  NACDLKIRAQREKLMETVSSQFDGKLNILVSSAQLPYSQRKF 108
           +  D    A  +  +E    +  G+L+ILV++A   Y Q+  
Sbjct: 104 DVSD---EAFCKDAVEETVREL-GRLDILVNNAAFQYPQQSL 141

Length = 290

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 52.0 bits (125), Expect = 3e-09
 Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 4/90 (4%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           LKG  A+VTGG +G+G A    L A GA V      + E      E             
Sbjct: 2  RLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDAARFFH---L 58

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D+        +++T    F G+L++LV++A
Sbjct: 59 DVTDEDGWTAVVDTAREAF-GRLDVLVNNA 87

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 51.9 bits (125), Expect = 5e-09
 Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 2/91 (2%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGNA 68
          SLKG  A+VTGG++GIG A+   LA  GA V     +     ++ +E   K G++     
Sbjct: 5  SLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYK 64

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          CD+  +   EK  + +   F GK++IL+++A
Sbjct: 65 CDVSSQESVEKTFKQIQKDF-GKIDILIANA 94

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 51.7 bits (124), Expect = 6e-09
 Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 3/90 (3%)

Query: 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSK-GLQVSGNAC 69
          KG  ALVTG T GIG  +   LAA GA IV     +  E+        +K G++V  +  
Sbjct: 1  KGKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGA 60

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          DL   A  E ++     QF G ++ILV++A
Sbjct: 61 DLSKPAAIEDMVAYAQRQF-GGVDILVNNA 89

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 51.4 bits (123), Expect = 8e-09
 Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 1/90 (1%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
          +L G TA+VTG   GIG  +  ELA  GA V     N+   N    E    G +  G A 
Sbjct: 4  NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAM 63

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D+         ++ V+ +F G ++ILVS+A
Sbjct: 64 DVTNEDAVNAGIDKVAERF-GSVDILVSNA 92

Length = 262

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 51.0 bits (122), Expect = 8e-09
 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 3/90 (3%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
          SL+G    +TGG  G+G A    LAA GA V    R    L+Q +    +  L++ G   
Sbjct: 4  SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGG--I 61

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          DL       + ++ V+ QF G+L+ LV+ A
Sbjct: 62 DLVDPQAARRAVDEVNRQF-GRLDALVNIA 90

Length = 239

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 51.3 bits (123), Expect = 9e-09
 Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 4/100 (4%)

Query: 1  MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKS 59
          +  F    +SL G  A+VTGG  G+G      LA  GA I+ T      +  +R+ E   
Sbjct: 3  LDKFSMDFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIE--K 60

Query: 60 KGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +G +V+    DL      EK+++    +F GK++ILV++A
Sbjct: 61 EGRKVTFVQVDLTKPESAEKVVKEALEEF-GKIDILVNNA 99

Length = 258

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 50.8 bits (122), Expect = 1e-08
 Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 1/87 (1%)

Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLK 72
          G TALVTG   GIG A+   LAA GA V      E       +     G  V     D+ 
Sbjct: 1  GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPADVT 60

Query: 73 IRAQREKLMETVSSQFDGKLNILVSSA 99
             +   ++   +++F G L+ILV++A
Sbjct: 61 KEDEIADMIAAAAAEF-GGLDILVNNA 86

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 50.7 bits (122), Expect = 1e-08
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 2/89 (2%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          LK    +VTGG  GIG A+   LA  GAI     R+  + ++  +E ++   +      D
Sbjct: 5  LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPD-DEFAEELRALQPRAEFVQVD 63

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          L   AQ    +E   ++F G+++ LV++A
Sbjct: 64 LTDDAQCRDAVEQTVAKF-GRIDGLVNNA 91

Length = 258

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 50.5 bits (121), Expect = 1e-08
 Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 1/89 (1%)

Query: 8  RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGN 67
          R+ L    A+VTG  +G+G A+    A  GA V   +R E++L++  ++ ++ G +    
Sbjct: 5  RFRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVV 64

Query: 68 ACDLKIRAQREKLMETVSSQFDGKLNILV 96
          A DL        L       F G+L+I+V
Sbjct: 65 AADLAHPEATAGLAGQAVEAF-GRLDIVV 92

Length = 263

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 50.5 bits (121), Expect = 1e-08
 Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 2/92 (2%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           LKG  ALVTG + GIG A+   LA  GA +V      E    + ++E K+ G +      
Sbjct: 1   LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIAVQA 60

Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSAQL 101
           D+        L ++   +F G L+ILV++A L
Sbjct: 61  DVSKEEDVVALFQSAIKEF-GTLDILVNNAGL 91

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 50.5 bits (121), Expect = 1e-08
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 5/95 (5%)

Query: 9  WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHT----CSRNETELNQRIQEWKSKGLQV 64
           SL     L+TGG+ G+G A+   LAA GA V        R   E +      ++ G + 
Sbjct: 2  ASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKA 61

Query: 65 SGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           G A D++  A     ++    +F G+L+ILV++A
Sbjct: 62 LGLAFDVRDFAATRAALDAGVEEF-GRLDILVNNA 95

Length = 249

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 50.3 bits (121), Expect = 2e-08
 Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 2/87 (2%)

Query: 14 MTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLK 72
            ALVTGG +GIG  +   LAA G  +      ++ EL    QE ++ G++V     D+ 
Sbjct: 3  PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVA 62

Query: 73 IRAQREKLMETVSSQFDGKLNILVSSA 99
            +  E +++   + + G+++ LV++A
Sbjct: 63 DLSAHEAMLDAAQAAW-GRIDCLVNNA 88

Length = 256

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 50.1 bits (120), Expect = 2e-08
 Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 2/91 (2%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRI-QEWKSKGLQVSGNA 68
           L G TALVTG ++GIG    + LA  GA V    R +     ++  E ++ G + S   
Sbjct: 3  DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVG 62

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           DL        LM+T   +F G L+ LV +A
Sbjct: 63 ADLTDEESVAALMDTAREEF-GGLDALVLNA 92

Length = 248

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 50.0 bits (120), Expect = 2e-08
 Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 13/93 (13%)

Query: 9  W-SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETEL-NQRIQEWKSKGLQVSG 66
          W +L+G   +VTGG+ GIG A+V+EL A GA V     +  +  ++  Q           
Sbjct: 4  WLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQHENYQFVP-------- 55

Query: 67 NACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
             D+    +    +  +  +F G+++ LV++A
Sbjct: 56 --TDVSSAEEVNHTVAEIIEKF-GRIDGLVNNA 85

Length = 266

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 49.8 bits (119), Expect = 2e-08
 Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 1/96 (1%)

Query: 4  FREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ 63
          F      L G  A++TG   GIG  +    A  GA V     N    N  + E +  G Q
Sbjct: 2  FNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ 61

Query: 64 VSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
               CD+    +   L +   S+  GK++ILV++A
Sbjct: 62 AFACRCDITSEQELSALADFALSKL-GKVDILVNNA 96

Length = 255

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 49.6 bits (119), Expect = 3e-08
 Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 11/89 (12%)

Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-----TELNQRIQEWKSKGLQVSGNACD 70
          A++TGG  GIG A  + L   GA V    RNE      EL     + K+  +Q     CD
Sbjct: 3  AIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAELQAINPKVKATFVQ-----CD 57

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +    Q     +    +F G+++IL+++A
Sbjct: 58 VTSWEQLAAAFKKAIEKF-GRVDILINNA 85

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha, 15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 49.6 bits (119), Expect = 3e-08
 Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 5/91 (5%)

Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK----GLQVSGNA 68
          G   L+TGG+ GIG A+ +EL   GA V   +R+E++L + ++E +++    G +VS  +
Sbjct: 1  GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           DL    + E+       +  G  +++V+ A
Sbjct: 61 ADLSDYEEVEQAFAQAVEKG-GPPDLVVNCA 90

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 49.5 bits (119), Expect = 3e-08
 Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 1/85 (1%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR 74
            L+TGG  GIG  +  E A  GA V     NE    +     +  G +V    CD+  R
Sbjct: 1  IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKR 60

Query: 75 AQREKLMETVSSQFDGKLNILVSSA 99
           +  +  + +  +  G + IL+++A
Sbjct: 61 EEVYEAAKKIKKEV-GDVTILINNA 84

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 49.5 bits (119), Expect = 4e-08
 Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 2/90 (2%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
            L G  ALVTG   GIG A  + LAA GA V     +E        E      +  G AC
Sbjct: 419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPD-RALGVAC 477

Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           D+   A  +   E  +  F G ++I+VS+A
Sbjct: 478 DVTDEAAVQAAFEEAALAFGG-VDIVVSNA 506

Length = 681

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 49.0 bits (117), Expect = 4e-08
 Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 2/94 (2%)

Query: 15  TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-LNQRIQEWKSKGLQVSGNACDLKI 73
            A+VTG ++GIG A+  ELAA G  +      + +   + + E  + G +      D+  
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQADIGE 62

Query: 74  RAQREKLMETVSSQFDGKLNILVSSAQLPYSQRK 107
            +  E L++     F G+L+ LV++A +    R 
Sbjct: 63  LSDHEALLDQAWEDF-GRLDCLVNNAGIAVRPRG 95

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 49.2 bits (118), Expect = 4e-08
 Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 4/85 (4%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          L+G TAL+TGGT GIG     +  A GA V    R+   L     E     L +  +A D
Sbjct: 4  LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGD 63

Query: 71 LKIRAQREKLMETVSSQFDGKLNIL 95
            + AQ+  L + ++  F G+L+ +
Sbjct: 64 --VAAQKA-LAQALAEAF-GRLDAV 84

Length = 249

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 49.4 bits (118), Expect = 5e-08
 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 1/89 (1%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
           L G   L+TG + GIG A  E+ A  GA V   +R E  L+         G       CD
Sbjct: 38  LTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCD 97

Query: 71  LKIRAQREKLMETVSSQFDGKLNILVSSA 99
           L      + L+  V  +  G ++IL+++A
Sbjct: 98  LSDLDAVDALVADVEKRI-GGVDILINNA 125

Length = 293

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 48.8 bits (117), Expect = 5e-08
 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 5/88 (5%)

Query: 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDL 71
          KG+ A+VTGG  G+G A VE L A GA V       +     + +       V     D+
Sbjct: 1  KGLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGET-VAKLGDNCRFV---PVDV 56

Query: 72 KIRAQREKLMETVSSQFDGKLNILVSSA 99
                +  +    ++F G+L+I+V+ A
Sbjct: 57 TSEKDVKAALALAKAKF-GRLDIVVNCA 83

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 48.8 bits (117), Expect = 5e-08
 Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 2/93 (2%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           L G  ALVTGGT+G+G A+    A  GA  +  C RN  +   +  E ++ G +      
Sbjct: 4   LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQA 63

Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSAQLP 102
           DL       +++      F G+L+ LV++A L 
Sbjct: 64  DLSDVEDCRRVVAAADEAF-GRLDALVNAAGLT 95

Length = 260

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 48.7 bits (116), Expect = 6e-08
 Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 4/97 (4%)

Query: 8   RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-LQVSG 66
           RW   G  ALVTG + GIG AV   L   G  V  C+R   ++     E +S G   +  
Sbjct: 3   RWR--GRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPTLFP 60

Query: 67  NACDLKIRAQREKLMETVSSQFDGKLNILVSSAQLPY 103
             CDL    Q   +   + +Q  G +++ +++A L  
Sbjct: 61  YQCDLSNEEQILSMFSAIRTQHQG-VDVCINNAGLAR 96

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 48.3 bits (115), Expect = 7e-08
 Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 1/91 (1%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
           L+G  ALVTG + GIG A    LAA GA V   +R    L     E +++G +      D
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVLELD 60

Query: 71  LKIRAQREKLMETVSSQFDGKLNILVSSAQL 101
           +    Q +  +E       G+L+ILV++A +
Sbjct: 61  VTDEQQVDAAVERTVEAL-GRLDILVNNAGI 90

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 48.6 bits (116), Expect = 8e-08
 Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 1/91 (1%)

Query: 9  WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
          + L G  ALVTG ++GIGYA+ E LA  GA V    R+  +L    +  K +GL     A
Sbjct: 6  FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALA 65

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           D+         ++   ++  G ++ILV++A
Sbjct: 66 FDVTDHDAVRAAIDAFEAEI-GPIDILVNNA 95

Length = 255

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 48.4 bits (116), Expect = 8e-08
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 4/89 (4%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          L G  AL+TGG  GIG A+VE   A GA V    R+  +L    Q +    L V G+   
Sbjct: 4  LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTS 63

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
                +  + +TV   F GKL+  V +A
Sbjct: 64 YA--DNQRAVDQTV-DAF-GKLDCFVGNA 88

Length = 263

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 48.0 bits (115), Expect = 1e-07
 Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 1/89 (1%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
            G   +V GGT GI   + +  A  GA V   SR++ +++  + + +  G +  G + D
Sbjct: 7  FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSAD 66

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          ++  A  E     ++ +F G +++LVS A
Sbjct: 67 VRDYAAVEAAFAQIADEF-GPIDVLVSGA 94

Length = 264

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 48.0 bits (115), Expect = 1e-07
 Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 1/90 (1%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           L G  A++TG + GIG A  +  A  GA V   +R + EL+Q + E +++G +    A 
Sbjct: 3  RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAG 62

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D++  A  + L+     +F G L+I  ++A
Sbjct: 63 DVRDEAYAKALVALAVERF-GGLDIAFNNA 91

Length = 254

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 47.6 bits (114), Expect = 1e-07
 Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 4/85 (4%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR 74
            L+TG + GIG A+   LAA G  V   +RN  +L    +        +     D+   
Sbjct: 2  VVLITGCSSGIGLALALALAAQGYRVIATARNPDKLESLGELLNDNLEVLE---LDVTDE 58

Query: 75 AQREKLMETVSSQFDGKLNILVSSA 99
             +  ++ V  +F G++++LV++A
Sbjct: 59 ESIKAAVKEVIERF-GRIDVLVNNA 82

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 47.4 bits (113), Expect = 2e-07
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 2/86 (2%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-LNQRIQEWKSKGLQVSGNACDLKI 73
           A++TG  +GIG A+ E LAA G  +     N  E     IQE    G        D+  
Sbjct: 4  VAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADVTD 63

Query: 74 RAQREKLMETVSSQFDGKLNILVSSA 99
          +   E L++    +F G  +++V++A
Sbjct: 64 KDDVEALIDQAVEKF-GSFDVMVNNA 88

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 47.3 bits (113), Expect = 2e-07
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          LKG  AL+TGG  G+G A+VE   A GA V    R+  ++ +   ++    + V G+   
Sbjct: 2  LKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRADFGDAVVGVEGDVRS 61

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          L   A  E+ +     +F GKL+  + +A
Sbjct: 62 L---ADNERAVARCVERF-GKLDCFIGNA 86

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 47.2 bits (113), Expect = 2e-07
 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 3/89 (3%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          LK    L+TG + GIG A+ E LAA GA +    RN  +L          G +      D
Sbjct: 3  LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPG-RHRWVVAD 61

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          L   A RE ++   + +  G +N+L+++A
Sbjct: 62 LTSEAGREAVLA-RAREMGG-INVLINNA 88

Length = 263

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 46.6 bits (111), Expect = 3e-07
 Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 2/94 (2%)

Query: 13  GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLK 72
           G  ALVTGG  GIG A+ + LAA GA V     +  E+ +++ E    G +  G  CD+ 
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDP-EIAEKVAEAAQGGPRALGVQCDVT 59

Query: 73  IRAQREKLMETVSSQFDGKLNILVSSAQLPYSQR 106
             AQ +   E    +F G L+I+VS+A +  S  
Sbjct: 60  SEAQVQSAFEQAVLEFGG-LDIVVSNAGIATSSP 92

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 45.6 bits (109), Expect = 5e-07
 Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 6/79 (7%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGA--IVHTCSRN---ETELNQRIQEWKSKGLQVSGNAC 69
          T L+TGG  G+G A+   LA  GA  +V   SR+          + E ++ G +V+  AC
Sbjct: 2  TYLITGGLGGLGRALARWLAERGARRLVLL-SRSGPDAPGAAALLAELEAAGARVTVVAC 60

Query: 70 DLKIRAQREKLMETVSSQF 88
          D+  R     ++  + +  
Sbjct: 61 DVADRDALAAVLAAIPAVE 79

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 46.0 bits (110), Expect = 5e-07
 Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 12/106 (11%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC- 69
           L+G   ++TG + GIG  +   LA  GA +   +R E  L    +E KS+ L++   +  
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERL----EEVKSECLELGAPSPH 56

Query: 70  ----DLKIRAQREKLMETVSSQFDGKLNILVSSAQLPYSQRKFFVK 111
               D+      E+++E     F G L+IL+++A    S R  F  
Sbjct: 57  VVPLDMSDLEDAEQVVEEALKLF-GGLDILINNAG--ISMRSLFHD 99

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 46.0 bits (109), Expect = 6e-07
 Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 1/84 (1%)

Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRA 75
          A+VTGG  GIG A+   LA  GA V                 +  G Q  G  C++    
Sbjct: 2  AIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSEQ 61

Query: 76 QREKLMETVSSQFDGKLNILVSSA 99
            E +++   SQF G + ILV++A
Sbjct: 62 DLEAVVKATVSQF-GGITILVNNA 84

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 45.8 bits (108), Expect = 8e-07
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 2/91 (2%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRI-QEWKSKGLQVSGNA 68
           L G  A+VTGG KGIG A+   LA  GA V     +  E  + +  E   +G  V    
Sbjct: 3  QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQ 62

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           D+       +L+E   + F GK++ILV++A
Sbjct: 63 ADVSKVEDANRLVEEAVNHF-GKVDILVNNA 92

Length = 247

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 45.4 bits (108), Expect = 1e-06
 Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 2/85 (2%)

Query: 16 ALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR 74
          ALVTGG++GIG A+   LA  GA +V    +++    +   E +  G +      D+   
Sbjct: 1  ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVVVRADVSQP 60

Query: 75 AQREKLMETVSSQFDGKLNILVSSA 99
             E++   V  +F G+L++LVS+A
Sbjct: 61 QDVEEMFAAVKERF-GRLDVLVSNA 84

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 45.3 bits (108), Expect = 1e-06
 Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 11/96 (11%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGN 67
          +     AL+TGG + IG A+   L A G    +H   R+  E +    E  +      G+
Sbjct: 3  TDSAKVALITGGARRIGAAIARTLHAAGYRVAIH-YHRSAAEADALAAELNA---LRPGS 58

Query: 68 AC----DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          A     DL       +L+    + F G+L+ LV++A
Sbjct: 59 AAALQADLLDPDALPELVAACVAAF-GRLDALVNNA 93

Length = 249

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 45.1 bits (107), Expect = 1e-06
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 4/92 (4%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL---QVSGN 67
          L G  A++TG + GIG       A  GA +    R+   L +  Q     G+   ++   
Sbjct: 1  LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLV 60

Query: 68 ACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            DL     +++++ T  ++F G+L+ILV++A
Sbjct: 61 VADLTEEEGQDRIISTTLAKF-GRLDILVNNA 91

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 45.1 bits (107), Expect = 1e-06
 Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 3/91 (3%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSK-GLQVSGNA 68
          +KG T +++GGT+GIG A+V E A  G  I  T + N  E N+  ++ + K G++     
Sbjct: 6  MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYP 65

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           ++      ++L + +   FD +++  +S+A
Sbjct: 66 LNILEPETYKELFKKIDEDFD-RVDFFISNA 95

Length = 260

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 44.8 bits (106), Expect = 1e-06
 Identities = 21/47 (44%), Positives = 27/47 (57%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE 56
             G  ALVTG  KGIG A V+ LA  GA V   SR + +L+  ++E
Sbjct: 4  DFAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRE 50

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 45.2 bits (107), Expect = 1e-06
 Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 9/94 (9%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIV----HTCSRNETELNQRIQEWKSKGLQVS 65
           L G  A+VTG   G+G A    LA  GA V       + + +++   I+   +K + V+
Sbjct: 9  DLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVA 68

Query: 66 GNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          G+      RA  ++L+ T  +   G L+I+V++A
Sbjct: 69 GDISQ---RATADELVAT--AVGLGGLDIVVNNA 97

Length = 306

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 44.7 bits (106), Expect = 2e-06
 Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 3/91 (3%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNA 68
          L G  ALVTG  +GIG A+    A  GA V     +     +          G +V    
Sbjct: 5  LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVP 64

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           D+   A     +      F G L++LV++A
Sbjct: 65 ADVTDAASVAAAVAAAEEAF-GPLDVLVNNA 94

Length = 260

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 44.8 bits (106), Expect = 2e-06
 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 2/89 (2%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
           +G   +VTG  +GIG  V E LA  GA V    R+E        E  + G     +  D
Sbjct: 2  FEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRSELVHEVL-AEILAAGDAAHVHTAD 60

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          L+  A  + ++     +F G++++L+++ 
Sbjct: 61 LETYAGAQGVVRAAVERF-GRVDVLINNV 88

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 44.6 bits (106), Expect = 2e-06
 Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 18/97 (18%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-------TELNQRIQEWKSKGL 62
           L G  A+VTGG   IG AV   L A GA V     +          L +R +       
Sbjct: 3  GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFI----- 57

Query: 63 QVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
               A D+   A  E+ + TV ++F G+++ILV+ A
Sbjct: 58 -----ATDITDDAAIERAVATVVARF-GRVDILVNLA 88

Length = 261

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 44.6 bits (106), Expect = 2e-06
 Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 4/87 (4%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLK 72
           ALVTG  K IG A+ E LAA G   +VH  +R+E E  +   E  +          DL 
Sbjct: 2  VALVTGAAKRIGRAIAEALAAEGYRVVVH-YNRSEAEAQRLKDELNALRNSAVLVQADLS 60

Query: 73 IRAQREKLMETVSSQFDGKLNILVSSA 99
            A    L+      F G+ ++LV++A
Sbjct: 61 DFAACADLVAAAFRAF-GRCDVLVNNA 86

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 44.5 bits (106), Expect = 2e-06
 Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 10/91 (10%)

Query: 9  WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
              G T  VTG  +GIGYAV       GA V    +                   +   
Sbjct: 4  MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQE---------DYPFATFV 54

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           D+   A   ++ + + ++  G L++LV++A
Sbjct: 55 LDVSDAAAVAQVCQRLLAET-GPLDVLVNAA 84

Length = 252

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 44.3 bits (105), Expect = 2e-06
 Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 8/93 (8%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNET---ELNQRIQEWKSKGLQVSG 66
          L    A+VTG ++GIG A+   LAA G A+    + +     EL   I+    + + V  
Sbjct: 3  LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQA 62

Query: 67 NACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +  D    A   +L +   + F G++++LV++A
Sbjct: 63 DVAD---AAAVTRLFDAAETAF-GRIDVLVNNA 91

Length = 245

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 43.9 bits (104), Expect = 3e-06
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 4/91 (4%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
           L+G  AL+TG   GIG AV E   A GA V               E    G      + D
Sbjct: 4   LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALE---IGPAAIAVSLD 60

Query: 71  LKIRAQREKLMETVSSQFDGKLNILVSSAQL 101
           +  +   ++++     +F G ++IL ++A L
Sbjct: 61  VTRQDSIDRIVAAAVERF-GGIDILFNNAAL 90

Length = 257

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 43.5 bits (103), Expect = 4e-06
 Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 2/89 (2%)

Query: 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGNACD 70
          +    L+TG    IG A  + L + GA +     N   L Q  +E  +    +V     D
Sbjct: 1  EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELD 60

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +  +   ++L+E+   +F G+++IL+++A
Sbjct: 61 ITSKESIKELIESYLEKF-GRIDILINNA 88

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 43.3 bits (102), Expect = 5e-06
 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 12/89 (13%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          LK   A+VTGG++GIG AVV  L   G+ V      E               +      D
Sbjct: 4  LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS------YNDVDYFK-----VD 52

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +  + Q  K ++ V S++ G+++ILV++A
Sbjct: 53 VSNKEQVIKGIDYVISKY-GRIDILVNNA 80

Length = 258

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 43.1 bits (102), Expect = 5e-06
 Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLK 72
              ++TGG+ G+G A+ +  A  GA V    R + +L +   E +    QV     D++
Sbjct: 1  EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVR 60

Query: 73 IRAQREKLMETVSSQFDGKLNILVSSA 99
               +K++E +  +F G+++ L+++A
Sbjct: 61 NPEDVQKMVEQIDEKF-GRIDALINNA 86

Length = 252

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 43.0 bits (102), Expect = 6e-06
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 3/91 (3%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEW-KSKGLQVSGNA 68
           LKG  AL+TGG  GIG AV    A  GA +       E +  +  ++  + +G +     
Sbjct: 24  LKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRKCLLIP 83

Query: 69  CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            DL   +    L++ V  +F GKL+ILV++A
Sbjct: 84  GDLGDESFCRDLVKEVVKEF-GKLDILVNNA 113

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 43.1 bits (102), Expect = 7e-06
 Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 2/74 (2%)

Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRA 75
           ++TG ++G+G A+  +L   G  V + SR E +   ++ E  +  L  + ++ DL+   
Sbjct: 4  VIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNL--TFHSLDLQDVH 61

Query: 76 QREKLMETVSSQFD 89
          + E     + S   
Sbjct: 62 ELETNFNEILSSIQ 75

Length = 251

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 43.0 bits (101), Expect = 7e-06
 Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLK 72
          G  A++TGG  GIG A   E A  GA V     ++  L Q +   +++G  V G  CD++
Sbjct: 6  GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVR 65

Query: 73 IRAQREKLMETVSSQFDGKLNILVSSA 99
           R +   L +  + +  G ++++ S+A
Sbjct: 66 HREEVTHLADE-AFRLLGHVDVVFSNA 91

Length = 275

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 42.7 bits (101), Expect = 7e-06
 Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 4/87 (4%)

Query: 15 TALVTGGTKGIGYAVVEELAA--FGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLK 72
            ++TG ++GIG A+ EEL      ++V   +R+E  L Q ++E    GL+V+    DL 
Sbjct: 1  VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPL-QELKEELRPGLRVTTVKADLS 59

Query: 73 IRAQREKLMETVSSQFDGKLNILVSSA 99
            A  E+L+E +  + DG+ ++L+++A
Sbjct: 60 DAAGVEQLLEAI-RKLDGERDLLINNA 85

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 42.9 bits (101), Expect = 8e-06
 Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 4/88 (4%)

Query: 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDL 71
          +    LVTG   GIG A  +  A  G  V    RN     +R              A D+
Sbjct: 4  QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHH---ALAMDV 60

Query: 72 KIRAQREKLMETVSSQFDGKLNILVSSA 99
             AQ  +  E +  +F G++++LV++A
Sbjct: 61 SDEAQIREGFEQLHREF-GRIDVLVNNA 87

Length = 520

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 42.1 bits (100), Expect = 9e-06
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 6/79 (7%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNET---ELNQRIQEWKSKGLQVSGNAC 69
          T LVTGG  G+G  +   LA  GA  +V   SR+     E    + E +++G +V+  AC
Sbjct: 2  TYLVTGGLGGLGLELARWLAERGARHLV-LLSRSGAPDPEAEALLAELEARGAEVTVVAC 60

Query: 70 DLKIRAQREKLMETVSSQF 88
          D+  R     L+  + +  
Sbjct: 61 DVSDRDAVRALLAEIRADG 79

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 42.4 bits (100), Expect = 9e-06
 Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
            G  ALVTGG  GIG A     A  GA V    R+     + +   +  G +    ACD
Sbjct: 5  FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACD 64

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +   A+ + L+E   + + G+L+   ++A
Sbjct: 65 VTRDAEVKALVEQTIAAY-GRLDYAFNNA 92

Length = 253

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 42.2 bits (100), Expect = 1e-05
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 4/90 (4%)

Query: 14  MTALVTGGTKGIGYAVVEELAA--FGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDL 71
             ALVTG  + IG A+  +LAA  F   VH  +R+  E      E ++ G +      DL
Sbjct: 10  RAALVTGAARRIGRAIALDLAAHGFDVAVH-YNRSRDEAEALAAEIRALGRRAVALQADL 68

Query: 72  KIRAQREKLMETVSSQFDGKLNILVSSAQL 101
              A+   L+   S+   G + +LV++A L
Sbjct: 69  ADEAEVRALVARASAAL-GPITLLVNNASL 97

Length = 258

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 42.2 bits (100), Expect = 1e-05
 Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 6/87 (6%)

Query: 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE--TELNQRIQEWKSKGLQVSGNAC 69
           G   +VTG  +GIG  V    AA GA V    R+E   E+   +   ++ G +      
Sbjct: 7  AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAEL---RAAGGEALALTA 63

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILV 96
          DL+  A  +  M      F G++++L+
Sbjct: 64 DLETYAGAQAAMAAAVEAF-GRIDVLI 89

Length = 260

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 41.9 bits (99), Expect = 2e-05
 Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 6/95 (6%)

Query: 11  LKGMTALVTG--GTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GL-QVSG 66
           L G   LVT   GT GIG A        GA V     +E  L +   E  ++ GL +V  
Sbjct: 15  LAGKVVLVTAAAGT-GIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEA 73

Query: 67  NACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL 101
             CD+   AQ + L++    +  G+L++LV++A L
Sbjct: 74  VVCDVTSEAQVDALIDAAVERL-GRLDVLVNNAGL 107

Length = 262

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 42.1 bits (99), Expect = 2e-05
 Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 3/92 (3%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK--SKGLQVSGN 67
          S +  T LVTGG  GIG  V   L A GA V    RN  +L    +E +       V   
Sbjct: 4  SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYE 63

Query: 68 ACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            D+    Q  + ++  ++ + G+L+ +V  A
Sbjct: 64 PADVTDEDQVARAVDAATA-WHGRLHGVVHCA 94

Length = 276

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 42.0 bits (99), Expect = 2e-05
 Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 7/89 (7%)

Query: 17  LVTGGTKGIGYAVVEELA-AFGAIVHTCSR-----NETELNQRIQEWKSKGLQVSGNACD 70
           LVTGG  GIG A+   LA  +GA +    R      E    Q +   ++ G +V   + D
Sbjct: 209 LVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLYISAD 268

Query: 71  LKIRAQREKLMETVSSQFDGKLNILVSSA 99
           +   A   +L+E V  ++ G ++ ++ +A
Sbjct: 269 VTDAAAVRRLLEKVRERY-GAIDGVIHAA 296

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 41.6 bits (98), Expect = 2e-05
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 5/85 (5%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR 74
           ALVTG ++GIG  +   LA  G  V    RN  +L        + G  V     D +  
Sbjct: 2  VALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAAL----SASGGDVEAVPYDARDP 57

Query: 75 AQREKLMETVSSQFDGKLNILVSSA 99
               L++ +  +F G++++LV +A
Sbjct: 58 EDARALVDALRDRF-GRIDVLVHNA 81

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 41.7 bits (98), Expect = 2e-05
 Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 2/89 (2%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          L G  A+VTG   GIG A  +  A  GA V    R+     +      + G +      D
Sbjct: 3  LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGG-RAFARQGD 61

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +      E L++ V++++ G+L++LV++A
Sbjct: 62 VGSAEAVEALVDFVAARW-GRLDVLVNNA 89

Length = 252

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 41.6 bits (98), Expect = 2e-05
 Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 14/91 (15%)

Query: 16 ALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKG---LQVSGNACDL 71
          ALVTG ++GIG A+   LA  G  I    +R+     +  +E ++ G   L V  N    
Sbjct: 7  ALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANV--- 63

Query: 72 KIRAQREKLMETVSSQFD---GKLNILVSSA 99
                EK+ E   +Q D   G+L++ V++A
Sbjct: 64 ---GDVEKIKEMF-AQIDEEFGRLDVFVNNA 90

Length = 250

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 42.0 bits (99), Expect = 2e-05
 Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 3/71 (4%)

Query: 17  LVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQ-RIQEWKSKGLQVSGNACDLKI 73
           L+TGG  G+G  V   LAA GA  +V    R        R    ++ G +VS   CD+  
Sbjct: 154 LITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALLRAGGARVSVVRCDVTD 213

Query: 74  RAQREKLMETV 84
            A    L+  +
Sbjct: 214 PAALAALLAEL 224

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 41.6 bits (97), Expect = 2e-05
 Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 8/96 (8%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIV--HTCSRNETELNQRIQEWKSKGLQVSGNA 68
          LKG  ALVTG ++GIG A+ + LA  GA+V  H  +R E E  + + E +S G       
Sbjct: 2  LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKE-EAEETVYEIQSNGGSAFSIG 60

Query: 69 CDLKIRAQREKLMETVSSQF-----DGKLNILVSSA 99
           +L+     E L  ++ ++        K +IL+++A
Sbjct: 61 ANLESLHGVEALYSSLDNELQNRTGSTKFDILINNA 96

Length = 252

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 41.3 bits (97), Expect = 2e-05
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 1/80 (1%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          LKG    + G ++G+GYAV       GA V   SRNE +L +R+++  SK   +     D
Sbjct: 3  LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKL-KRMKKTLSKYGNIHYVVGD 61

Query: 71 LKIRAQREKLMETVSSQFDG 90
          +        ++E  +   + 
Sbjct: 62 VSSTESARNVIEKAAKVLNA 81

Length = 238

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 41.3 bits (97), Expect = 2e-05
 Identities = 33/130 (25%), Positives = 53/130 (40%), Gaps = 25/130 (19%)

Query: 10  SLKGMTALVTGGT--KGIGYAVVEELAAFGA-IVHT----CSRNETELNQRIQEW----- 57
            LK   A+VTG +   GIG A+ +ELA  GA I  T      +       + ++      
Sbjct: 3   QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEE 62

Query: 58  -KSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA----QLPYSQ------- 105
               G++VS    DL      ++L+  V+ Q  G  +ILV++A       +S        
Sbjct: 63  LLKNGVKVSSMELDLTQNDAPKELLNKVTEQL-GYPHILVNNAAYSTNNDFSNLTAEELD 121

Query: 106 RKFFVKSRGP 115
           + + V  R  
Sbjct: 122 KHYMVNVRAT 131

Length = 256

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 41.3 bits (97), Expect = 3e-05
 Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 6/90 (6%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KGLQVSGNAC 69
          LKG   LVTGG  G+G A+V+   A GA V    ++       +QE ++  G  V G   
Sbjct: 3  LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSA----AGLQELEAAHGDAVVGVEG 58

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D++     ++ +    + F GK++ L+ +A
Sbjct: 59 DVRSLDDHKEAVARCVAAF-GKIDCLIPNA 87

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 41.2 bits (97), Expect = 3e-05
 Identities = 19/52 (36%), Positives = 27/52 (51%)

Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQV 64
          G + LVTG + GIG A    LA  GA V   +RN   L++   E   + L++
Sbjct: 9  GKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRL 60

Length = 245

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 41.3 bits (97), Expect = 3e-05
 Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 2/91 (2%)

Query: 9  WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
          +S+ G   LVTGG++GIG  + +     GA V   +R         +E  + G +     
Sbjct: 2  FSVAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYG-ECIAIP 60

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           DL      E L+  V+ + D +L++LV++A
Sbjct: 61 ADLSSEEGIEALVARVAERSD-RLDVLVNNA 90

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 41.1 bits (97), Expect = 3e-05
 Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 1/89 (1%)

Query: 15  TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR 74
            AL+TG + GIG A     A  G  +   +R++  L     E +S G++ +  + DL   
Sbjct: 8   RALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNP 67

Query: 75  AQREKLMETVSSQFDGKLNILVSSAQLPY 103
                 +  +  QF G  ++L+++A + Y
Sbjct: 68  EAIAPGIAELLEQF-GCPDVLINNAGMAY 95

Length = 241

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 40.9 bits (96), Expect = 4e-05
 Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 2/94 (2%)

Query: 9   WSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGN 67
           +SLK    +VTG  +GIG A+   LA  G+ +V    +   E+N+ ++  K  G +  G 
Sbjct: 2   YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGV 61

Query: 68  ACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL 101
             D+  R   E L +    ++    +ILV++A L
Sbjct: 62  LADVSTREGCETLAKATIDRYGV-ADILVNNAGL 94

Length = 252

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 40.8 bits (96), Expect = 4e-05
 Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 14/103 (13%)

Query: 10  SLKGMTALVTGGTK--GIGYAVVEELAAFGAIV--HTCSRNETELNQRI---------QE 56
            L    ALVTG ++  GIG AV   LAA G  +     S  +  +   +         +E
Sbjct: 2   PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEE 61

Query: 57  WKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            +S G++      DL       ++   VS +  G  +IL+++A
Sbjct: 62  IESYGVRCEHMEIDLSQPYAPNRVFYAVSERL-GDPSILINNA 103

Length = 256

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 40.9 bits (96), Expect = 4e-05
 Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 1/86 (1%)

Query: 16  ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRA 75
           ALVTG  +GIG+A+ + L   G  V     NE        +    G +      D+  R 
Sbjct: 5   ALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRD 64

Query: 76  QREKLMETVSSQFDGKLNILVSSAQL 101
           Q    +  V   F G LN++V++A +
Sbjct: 65  QVFAAVRQVVDTF-GDLNVVVNNAGV 89

Length = 256

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 40.8 bits (95), Expect = 4e-05
 Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 6/96 (6%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHT-CSRNETELNQRIQEWKSKGLQVSGNA 68
          +L G  ALVTG ++GIG A+   LA  GA+V     RN+   ++ I+E +S G +     
Sbjct: 3  NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIE 62

Query: 69 CDLKIRAQREKLMETVSSQFD-----GKLNILVSSA 99
           DL      +KL+E + ++        +++ILV++A
Sbjct: 63 ADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNA 98

Length = 254

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 40.6 bits (95), Expect = 4e-05
 Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 2/89 (2%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          L G TAL+TG  +GIG  +    A  GA +     +  E+ +   E   +G + +    D
Sbjct: 4  LTGKTALITGALQGIGEGIARVFARHGANLILLDISP-EIEKLADELCGRGHRCTAVVAD 62

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          ++  A     ++    +  G+++ILV++A
Sbjct: 63 VRDPASVAAAIKRAKEKE-GRIDILVNNA 90

Length = 263

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 40.5 bits (95), Expect = 5e-05
 Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 4/98 (4%)

Query: 9   WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
             L+G  A+VTG   G G  +    A  GA V     N     +   +     + +    
Sbjct: 1   MRLEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADIGEAAIAI---Q 57

Query: 69  CDLKIRAQREKLMETVSSQFDGKLNILVSSAQLPYSQR 106
            D+  RA  E ++E   S+F G+L+ILV++A + +  +
Sbjct: 58  ADVTKRADVEAMVEAALSKF-GRLDILVNNAGITHRNK 94

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 40.3 bits (95), Expect = 6e-05
 Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRN 46
           +KG   LVTG  +GIG A VE+L A GA  V+  +R+
Sbjct: 3  DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARD 40

Length = 238

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 39.9 bits (94), Expect = 7e-05
 Identities = 20/45 (44%), Positives = 26/45 (57%)

Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
          A+VTG T GIG A  EELA  G  V   SR + +L+   +E + K
Sbjct: 4  AVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEK 48

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 39.9 bits (94), Expect = 8e-05
 Identities = 15/31 (48%), Positives = 18/31 (58%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIV 40
           L+G    +TGG +GIG A    LAA GA V
Sbjct: 2  DLRGKVVAITGGARGIGLATARALAALGARV 32

Length = 273

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 39.7 bits (93), Expect = 8e-05
 Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 2/91 (2%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
           L+G   ++TGG+ G+G A+        A +V     +E E N   +E K  G +     
Sbjct: 4  DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVK 63

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           D+ + +    L++T   +F G L++++++A
Sbjct: 64 GDVTVESDVVNLIQTAVKEF-GTLDVMINNA 93

Length = 261

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 39.4 bits (92), Expect = 1e-04
 Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 18/100 (18%)

Query: 1  MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRI-QEWKS 59
          M  F  K         LV GG++GIG A+V      GA V        +  +R+ QE  +
Sbjct: 1  MGAFTGK-------KVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGA 53

Query: 60 KGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            +Q           A R+ +++ V     G L+ILV +A
Sbjct: 54 TAVQTDS--------ADRDAVIDVVRKS--GALDILVVNA 83

Length = 237

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 39.4 bits (92), Expect = 1e-04
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 2/85 (2%)

Query: 16 ALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR 74
           ++TG ++GIG A     A  G A+     RN       +Q  + +G +    A D+   
Sbjct: 5  MIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADE 64

Query: 75 AQREKLMETVSSQFDGKLNILVSSA 99
          A   +L E V  +  G+L+ LV++A
Sbjct: 65 ADVLRLFEAVDREL-GRLDALVNNA 88

Length = 248

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 39.4 bits (92), Expect = 1e-04
 Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 2/86 (2%)

Query: 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKI 73
          M  LVT  ++GIG+ V  EL   GA V   SRNE  L + ++E K  G +V     DL  
Sbjct: 1  MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-EVYAVKADLSD 59

Query: 74 RAQREKLMETVSSQFDGKLNILVSSA 99
          +   + L++  + +  G ++ LV +A
Sbjct: 60 KDDLKNLVKE-AWELLGGIDALVWNA 84

Length = 259

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 6/89 (6%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-LQVSGNAC 69
          LK    LVTG   GIG       A  GA V    R E +L     E ++ G  Q +    
Sbjct: 10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPL 69

Query: 70 DLK--IRAQREKLMETVSSQF---DGKLN 93
          DL        ++L +T+  QF   DG L+
Sbjct: 70 DLLTATPQNYQQLADTIEEQFGRLDGVLH 98

Length = 247

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 39.0 bits (91), Expect = 2e-04
 Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 3/92 (3%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRI-QEWKSKGLQVSGNAC 69
                A+VTG   GIG A  E LA  GA V     N  E  +R+ ++  + G        
Sbjct: 4   FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADIN-AEGAERVAKQIVADGGTAIAVQV 62

Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSAQL 101
           D+      + + +   S F G ++ LV++A +
Sbjct: 63  DVSDPDSAKAMADATVSAF-GGIDYLVNNAAI 93

Length = 250

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 38.8 bits (91), Expect = 2e-04
 Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 1/89 (1%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
            G  A++TG   G G A     AA G  +      +  L++ + E +++G +V G   D
Sbjct: 4  FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTD 63

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +   AQ E L +    +F G +++L ++A
Sbjct: 64 VSDAAQVEALADAALERF-GAVHLLFNNA 91

Length = 287

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 38.4 bits (90), Expect = 3e-04
 Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 11/107 (10%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR----IQEWKSKGLQVS 65
            LKG T L+TG    IG A+V+ +   G IV     ++  LN+      +E+KSK L + 
Sbjct: 1   MLKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLV 60

Query: 66  GNACDLKIRAQREKLMETVSSQFDGKLNILVSSAQLPYSQ---RKFF 109
               D+  +   E+ +   + ++ GK++  V+ A  P ++   +KFF
Sbjct: 61  --ELDITDQESLEEFLSKSAEKY-GKIDGAVNCA-YPRNKDYGKKFF 103

Length = 256

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 38.2 bits (89), Expect = 3e-04
 Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 9/100 (9%)

Query: 15  TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR-IQEWKSKGLQVSGNACDLKI 73
             LVTG ++G+G A+    A  GA V       TE  +    E   + + +     D++ 
Sbjct: 2   VVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGERAIAIQA---DVRD 58

Query: 74  RAQREKLMETVSSQFDGKLNILVSSAQLPYS----QRKFF 109
           R Q + ++E   + F G ++ +V++A + +     QRK F
Sbjct: 59  RDQVQAMIEEAKNHF-GPVDTIVNNALIDFPFDPDQRKTF 97

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|236229 PRK08303, PRK08303, short chain dehydrogenase; Provisional

 Score = 38.4 bits (90), Expect = 3e-04
 Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 17/100 (17%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN-----------ET--ELNQRIQE 56
            L+G  ALV G T+G G  +  EL A GA V+   R+           ET  E  + +  
Sbjct: 5   PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTA 64

Query: 57  WKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILV 96
              +G+ V     D  +  Q   L+E +  +  G+L+ILV
Sbjct: 65  AGGRGIAV---QVDHLVPEQVRALVERIDREQ-GRLDILV 100

Length = 305

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 38.1 bits (89), Expect = 3e-04
 Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 1/82 (1%)

Query: 18 VTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQR 77
          +TG + GIG A     A  GA V   +R+   L++  +E +  G +      D+   AQ 
Sbjct: 5  ITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGEAIAVVADVADAAQV 64

Query: 78 EKLMETVSSQFDGKLNILVSSA 99
          E+  +T   +F G+++  V++A
Sbjct: 65 ERAADTAVERF-GRIDTWVNNA 85

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 37.8 bits (88), Expect = 4e-04
 Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 8/84 (9%)

Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRA 75
           +VTG  +GIG AV   L   GA V         L +     +   L V+  A    +R 
Sbjct: 1  VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLRLTPLDVADAA---AVRE 57

Query: 76 QREKLMETVSSQFDGKLNILVSSA 99
             +L+        G ++ LV+ A
Sbjct: 58 VCSRLLAE-----HGPIDALVNCA 76

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 37.8 bits (88), Expect = 4e-04
 Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 3/91 (3%)

Query: 9  WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
          +SL+G  ALVTG   G+G  +   LA  GA +    R  +E ++  Q+ ++ G +     
Sbjct: 1  FSLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGR--SEPSETQQQVEALGRRFLSLT 58

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           DL      + L+++   +F G ++ILV++A
Sbjct: 59 ADLSDIEAIKALVDSAVEEF-GHIDILVNNA 88

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 38.1 bits (89), Expect = 4e-04
 Identities = 17/52 (32%), Positives = 23/52 (44%)

Query: 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVS 65
              VTG   GIG A    LAA GA +    R+   L Q + + ++ G  V 
Sbjct: 1  KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVP 52

Length = 272

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 37.9 bits (88), Expect = 4e-04
 Identities = 18/51 (35%), Positives = 22/51 (43%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG 61
          L     LVTG + GIG       A +GA V    RNE +L Q       +G
Sbjct: 2  LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEG 52

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 37.6 bits (88), Expect = 5e-04
 Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 7/85 (8%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR 74
           ALVTG + GIG A    LAA G  V+  +R       ++++  S G+     + D+   
Sbjct: 5  VALVTGASSGIGKATARRLAAQGYTVYGAARRV----DKMEDLASLGVHPL--SLDVTDE 58

Query: 75 AQREKLMETVSSQFDGKLNILVSSA 99
          A  +  ++T+ ++ +G++++LV++A
Sbjct: 59 ASIKAAVDTIIAE-EGRIDVLVNNA 82

Length = 273

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 37.6 bits (87), Expect = 5e-04
 Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 3/98 (3%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW-KSKGLQVSGNA 68
           +L   T LVTG ++G+G  V +  AA GA V   +R++ +L +      ++   +     
Sbjct: 3   TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIR 62

Query: 69  CDLKIRAQRE--KLMETVSSQFDGKLNILVSSAQLPYS 104
            DL    ++E  +   T++    GKL+ +V  A   Y+
Sbjct: 63  FDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYA 100

Length = 239

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 37.6 bits (88), Expect = 6e-04
 Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 1/85 (1%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR 74
            ++TG + G+G A     A  GA V   +R E  L     E ++ G +      D+   
Sbjct: 10 VVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADA 69

Query: 75 AQREKLMETVSSQFDGKLNILVSSA 99
             +   +    +  G ++  V++A
Sbjct: 70 EAVQAAADRAEEEL-GPIDTWVNNA 93

Length = 334

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 37.5 bits (88), Expect = 6e-04
 Identities = 17/30 (56%), Positives = 19/30 (63%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIV 40
           L G  ALVTG  +GIG A+ E LA  GA V
Sbjct: 208 LAGKVALVTGAARGIGAAIAEVLARDGAHV 237

Length = 450

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 37.2 bits (87), Expect = 6e-04
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE 56
           TAL+TG ++GIG A+  ELA     +    R    L++   E
Sbjct: 4  PTALITGASRGIGAAIARELAP-THTLLLGGRPAERLDELAAE 45

Length = 227

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 37.1 bits (86), Expect = 7e-04
 Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 1/76 (1%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-LQVSGNAC 69
          L G  A  T  +KGIG+ V   LA  GA V   SRNE  L +  ++ KS+  + VS    
Sbjct: 6  LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVA 65

Query: 70 DLKIRAQREKLMETVS 85
          DL  R   E+ ++ + 
Sbjct: 66 DLTKREDLERTVKELK 81

Length = 263

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 37.0 bits (86), Expect = 7e-04
 Identities = 16/30 (53%), Positives = 18/30 (60%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIV 40
          L G  A++TGG  GIG A    LAA GA V
Sbjct: 5  LAGRVAVITGGGSGIGLATARRLAAEGATV 34

Length = 255

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 37.1 bits (86), Expect = 7e-04
 Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 9/94 (9%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIV-----HTCSRNETELNQRIQEWKSKGLQVS 65
           L+G  AL+TG   GIG A     A  GA +         ++  E+ Q IQ    K + + 
Sbjct: 53  LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALP 112

Query: 66  GNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           G   DLK  A   +L+E    +  G L+ILV+ A
Sbjct: 113 G---DLKDEAFCRQLVERAVKELGG-LDILVNIA 142

Length = 300

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 37.1 bits (86), Expect = 8e-04
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 4/87 (4%)

Query: 13  GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLK 72
                +TGG +GIG AV +  AA G  +    R+     +  +    + L V     D+ 
Sbjct: 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQ---ADIT 325

Query: 73  IRAQREKLMETVSSQFDGKLNILVSSA 99
             A  E     + +++ G+L++LV++A
Sbjct: 326 DEAAVESAFAQIQARW-GRLDVLVNNA 351

Length = 520

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 37.3 bits (87), Expect = 8e-04
 Identities = 16/43 (37%), Positives = 20/43 (46%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQ 52
          SL G   +VTG  +GIG  +   L A GA +      E EL  
Sbjct: 6  SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAA 48

Length = 296

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 36.9 bits (86), Expect = 8e-04
 Identities = 16/35 (45%), Positives = 19/35 (54%)

Query: 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET 48
          M   VTG T  IG AVV EL A G  V   +R++ 
Sbjct: 1  MKVFVTGATGFIGSAVVRELVAAGHEVVGLARSDA 35

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 36.9 bits (86), Expect = 8e-04
 Identities = 22/91 (24%), Positives = 34/91 (37%), Gaps = 5/91 (5%)

Query: 12 KGMTALVTGGTKGIGYAVVEELAAFG---AIVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
              A+V GG + +G  +   LA  G   A+    S     + Q I     +G    G  
Sbjct: 1  MNQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEG-MAYGFG 59

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           D         L   V   F G++++LV +A
Sbjct: 60 ADATSEQSVLALSRGVDEIF-GRVDLLVYNA 89

Length = 259

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 36.8 bits (85), Expect = 9e-04
 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 1/89 (1%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          LK  TA+VTGG  GIG A     A  GA V     N     +   + ++KG      ACD
Sbjct: 1  LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACD 60

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +  R   +  +        G +++LV++A
Sbjct: 61 ITDRDSVDTAVAAAEQAL-GPVDVLVNNA 88

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 36.7 bits (85), Expect = 0.001
 Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 2/89 (2%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          L+   A++TG + GIG A    LA  GA V         +++ + + KS G +      D
Sbjct: 4  LENKVAVITGASTGIGQASAIALAQEGAYV-LAVDIAEAVSETVDKIKSNGGKAKAYHVD 62

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +    Q +     +  QF G++++L ++A
Sbjct: 63 ISDEQQVKDFASEIKEQF-GRVDVLFNNA 90

Length = 272

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 36.2 bits (84), Expect = 0.002
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 5/44 (11%)

Query: 16 ALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWK 58
          ALVTGG  GIG A+ + LA  G  +   C  NE    +R + W 
Sbjct: 3  ALVTGGMGGIGTAICQRLAKDGYRVAANCGPNE----ERAEAWL 42

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 36.0 bits (84), Expect = 0.002
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA 38
          SL G T  +TG ++GIG A+    A  GA
Sbjct: 3  SLSGKTLFITGASRGIGLAIALRAARDGA 31

Length = 273

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 35.8 bits (83), Expect = 0.002
 Identities = 15/30 (50%), Positives = 17/30 (56%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIV 40
          L G TA+VTGG  G+G      LA  GA V
Sbjct: 24 LSGKTAIVTGGYSGLGLETTRALAQAGAHV 53

Length = 315

>gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs

 Score = 35.7 bits (83), Expect = 0.002
 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQE 56
          KG T LVTGG   IG  +V ++  FG   +    R+E +L++ ++E
Sbjct: 1  KGKTILVTGGAGSIGSELVRQILKFGPKKLIVFDRDENKLHELVRE 46

UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 35.8 bits (83), Expect = 0.002
 Identities = 16/28 (57%), Positives = 18/28 (64%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGA 38
          +K  T LVTG  +GIG A VE L A GA
Sbjct: 1  IKDKTVLVTGANRGIGKAFVESLLAHGA 28

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 35.9 bits (83), Expect = 0.002
 Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 5/94 (5%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA---IVHTCS-RNETELNQRIQEWKSKGLQVS 65
          SLKG   L+ GG K +G  +  +LAA GA    +H  S  ++ +  + +   K+ G +  
Sbjct: 5  SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAV 64

Query: 66 GNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
              DL   A  EKL +   + F G+ +I +++ 
Sbjct: 65 AFQADLTTAAAVEKLFDDAKAAF-GRPDIAINTV 97

Length = 257

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 35.7 bits (83), Expect = 0.002
 Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 2/89 (2%)

Query: 14  MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGNACDLK 72
            T L+TG + GIG A     A  GA +    R    L +   E  +K  ++V     D+ 
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVKVLPLQLDVS 60

Query: 73  IRAQREKLMETVSSQFDGKLNILVSSAQL 101
            R   E  +E +  +F   ++ILV++A L
Sbjct: 61  DRESIEAALENLPEEFR-DIDILVNNAGL 88

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 35.9 bits (83), Expect = 0.002
 Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 1/90 (1%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           L G   ++TG + GIG A  E  A  GA +   +R+E  L    +E ++ G +V     
Sbjct: 4  PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPT 63

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D+   A + K + T ++ F G++++ V++ 
Sbjct: 64 DVT-DADQVKALATQAASFGGRIDVWVNNV 92

Length = 330

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 35.5 bits (82), Expect = 0.003
 Identities = 16/35 (45%), Positives = 20/35 (57%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE 49
          T LVTG TKGIG A+   LA  G  V   +R+  +
Sbjct: 5  TVLVTGATKGIGLALSLRLANLGHQVIGIARSAID 39

Length = 234

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 35.7 bits (82), Expect = 0.003
 Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 4/91 (4%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
           L G TAL+TG  +GIG A  +     GA V     N         E       +S +  D
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPAACAISLDVTD 60

Query: 71  LKIRAQREKLMETVSSQFDGKLNILVSSAQL 101
              +A  ++ +  +  ++ G ++ILV++A L
Sbjct: 61  ---QASIDRCVAALVDRW-GSIDILVNNAAL 87

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 35.5 bits (82), Expect = 0.003
 Identities = 21/93 (22%), Positives = 48/93 (51%), Gaps = 5/93 (5%)

Query: 9  WSLKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSG 66
          +SL G   L+TG  +GIG+ +   LA +GA  I++  +    E    + + + +G++   
Sbjct: 5  FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAE--LAVAKLRQEGIKAHA 62

Query: 67 NACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
             ++  + + E  +E +     G +++L+++A
Sbjct: 63 APFNVTHKQEVEAAIEHIEKDI-GPIDVLINNA 94

Length = 254

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 35.5 bits (82), Expect = 0.003
 Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 4/91 (4%)

Query: 15  TALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKI 73
           T LVTGG++G+G A+    A  GA +V    ++E        E   + + +  +  D   
Sbjct: 7   TVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTD--- 63

Query: 74  RAQREKLMETVSSQFDGKLNILVSSAQLPYS 104
           R Q + +  T +  F   +  +V++A   +S
Sbjct: 64  REQVQAMFATATEHFGKPITTVVNNALADFS 94

Length = 253

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 35.3 bits (82), Expect = 0.003
 Identities = 17/37 (45%), Positives = 22/37 (59%)

Query: 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETEL 50
          M  L+ GGT+ IG A+VEEL A G  V   +R  T+ 
Sbjct: 1  MKILIIGGTRFIGKALVEELLAAGHDVTVFNRGRTKP 37

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 35.4 bits (81), Expect = 0.003
 Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 1/91 (1%)

Query: 9  WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
          + L G  AL+TG + GIG  V       GA V   +R+   L +   E  + G +V    
Sbjct: 5  FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVC 64

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          CD+    Q   +++ V+++  G ++I V +A
Sbjct: 65 CDVSQHQQVTSMLDQVTAELGG-IDIAVCNA 94

Length = 253

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 35.3 bits (81), Expect = 0.004
 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 11/93 (11%)

Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNA---- 68
          G + L+TG   GIG A    +A  G  VH   RN+T    R +E + +    SGN     
Sbjct: 1  GRSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQT----RAEEARKEIETESGNQNIFL 56

Query: 69 --CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
             D+    Q  + +E    +   KL++L+++A
Sbjct: 57 HIVDMSDPKQVWEFVEEFKEEGK-KLHVLINNA 88

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	120
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.93
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.92
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.91
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.91
PRK07478	254	short chain dehydrogenase; Provisional	99.88
PRK05876	275	short chain dehydrogenase; Provisional	99.88
PRK05867	253	short chain dehydrogenase; Provisional	99.88
PRK06139	330	short chain dehydrogenase; Provisional	99.87
KOG1208	314	consensus Dehydrogenases with different specificit	99.87
PRK05854	313	short chain dehydrogenase; Provisional	99.87
PRK07791	286	short chain dehydrogenase; Provisional	99.87
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.87
KOG0725	270	consensus Reductases with broad range of substrate	99.87
PRK08589	272	short chain dehydrogenase; Validated	99.86
PRK07063	260	short chain dehydrogenase; Provisional	99.86
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.86
PRK06114	254	short chain dehydrogenase; Provisional	99.86
PRK08862	227	short chain dehydrogenase; Provisional	99.86
PRK08339	263	short chain dehydrogenase; Provisional	99.86
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.86
PRK06194	287	hypothetical protein; Provisional	99.86
PRK07062	265	short chain dehydrogenase; Provisional	99.86
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.85
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.85
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.85
PRK07109	334	short chain dehydrogenase; Provisional	99.85
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.85
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.85
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.85
PRK05872	296	short chain dehydrogenase; Provisional	99.85
PRK08303	305	short chain dehydrogenase; Provisional	99.85
PRK06197	306	short chain dehydrogenase; Provisional	99.85
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.85
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.85
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.85
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.85
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.84
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.84
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.84
PRK08265	261	short chain dehydrogenase; Provisional	99.84
PRK05866	293	short chain dehydrogenase; Provisional	99.84
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.84
PRK08278	273	short chain dehydrogenase; Provisional	99.84
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.84
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.84
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.84
PRK06172	253	short chain dehydrogenase; Provisional	99.84
PRK05717	255	oxidoreductase; Validated	99.84
PLN02253	280	xanthoxin dehydrogenase	99.84
PRK07890	258	short chain dehydrogenase; Provisional	99.84
PRK07576	264	short chain dehydrogenase; Provisional	99.84
PRK07035	252	short chain dehydrogenase; Provisional	99.84
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.83
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.83
PRK07677	252	short chain dehydrogenase; Provisional	99.83
PRK07774	250	short chain dehydrogenase; Provisional	99.83
PRK07814	263	short chain dehydrogenase; Provisional	99.83
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.83
PRK09242	257	tropinone reductase; Provisional	99.83
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.83
PRK08643	256	acetoin reductase; Validated	99.83
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.83
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.83
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.82
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.82
PRK06128	300	oxidoreductase; Provisional	99.82
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.82
PRK08628	258	short chain dehydrogenase; Provisional	99.82
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.82
PRK07825	273	short chain dehydrogenase; Provisional	99.82
PRK06720	169	hypothetical protein; Provisional	99.82
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.82
PRK06196	315	oxidoreductase; Provisional	99.82
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.82
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.82
PRK05855	582	short chain dehydrogenase; Validated	99.82
PRK06138	252	short chain dehydrogenase; Provisional	99.82
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.81
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.81
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.81
PRK09134	258	short chain dehydrogenase; Provisional	99.81
PRK07806	248	short chain dehydrogenase; Provisional	99.81
PRK06398	258	aldose dehydrogenase; Validated	99.81
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.81
PRK07024	257	short chain dehydrogenase; Provisional	99.81
PRK12939	250	short chain dehydrogenase; Provisional	99.81
PRK07985	294	oxidoreductase; Provisional	99.81
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.81
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.81
PRK07067	257	sorbitol dehydrogenase; Provisional	99.81
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.81
PRK07856	252	short chain dehydrogenase; Provisional	99.81
PRK07454	241	short chain dehydrogenase; Provisional	99.81
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.81
PRK08226	263	short chain dehydrogenase; Provisional	99.81
PRK06949	258	short chain dehydrogenase; Provisional	99.81
PRK06940	275	short chain dehydrogenase; Provisional	99.81
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.81
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.8
PRK06484	520	short chain dehydrogenase; Validated	99.8
PRK12743	256	oxidoreductase; Provisional	99.8
PRK06500	249	short chain dehydrogenase; Provisional	99.8
PRK12747	252	short chain dehydrogenase; Provisional	99.8
PRK06701	290	short chain dehydrogenase; Provisional	99.8
PRK09072	263	short chain dehydrogenase; Provisional	99.8
PRK08251	248	short chain dehydrogenase; Provisional	99.8
PRK09186	256	flagellin modification protein A; Provisional	99.8
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.8
PRK12744	257	short chain dehydrogenase; Provisional	99.8
PRK05599	246	hypothetical protein; Provisional	99.8
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.8
PRK12937	245	short chain dehydrogenase; Provisional	99.79
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.79
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.79
PRK07775	274	short chain dehydrogenase; Provisional	99.79
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.79
PRK05650	270	short chain dehydrogenase; Provisional	99.79
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.79
PRK06125	259	short chain dehydrogenase; Provisional	99.79
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.79
PRK07831	262	short chain dehydrogenase; Provisional	99.79
PRK06484	520	short chain dehydrogenase; Validated	99.79
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.79
PLN00015	308	protochlorophyllide reductase	99.79
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.78
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.78
PRK06198	260	short chain dehydrogenase; Provisional	99.78
PRK06123	248	short chain dehydrogenase; Provisional	99.78
PRK06180	277	short chain dehydrogenase; Provisional	99.78
PRK07904	253	short chain dehydrogenase; Provisional	99.78
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.78
PRK05875	276	short chain dehydrogenase; Provisional	99.78
PRK08267	260	short chain dehydrogenase; Provisional	99.78
PRK12746	254	short chain dehydrogenase; Provisional	99.77
PRK07201	657	short chain dehydrogenase; Provisional	99.77
PRK07326	237	short chain dehydrogenase; Provisional	99.77
PRK06523	260	short chain dehydrogenase; Provisional	99.77
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.77
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.77
PRK06182	273	short chain dehydrogenase; Validated	99.77
PRK08263	275	short chain dehydrogenase; Provisional	99.77
PRK06483	236	dihydromonapterin reductase; Provisional	99.77
PRK07832	272	short chain dehydrogenase; Provisional	99.77
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.76
PRK09135	249	pteridine reductase; Provisional	99.76
PRK06841	255	short chain dehydrogenase; Provisional	99.76
PRK08703	239	short chain dehydrogenase; Provisional	99.76
PRK06914	280	short chain dehydrogenase; Provisional	99.76
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.76
PRK05993	277	short chain dehydrogenase; Provisional	99.76
PRK06179	270	short chain dehydrogenase; Provisional	99.76
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.76
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.76
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.76
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.75
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.75
PRK12827	249	short chain dehydrogenase; Provisional	99.75
PRK12829	264	short chain dehydrogenase; Provisional	99.75
PLN02780	320	ketoreductase/ oxidoreductase	99.75
PRK06057	255	short chain dehydrogenase; Provisional	99.75
PRK06181	263	short chain dehydrogenase; Provisional	99.75
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.75
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.75
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.75
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.75
PRK12828	239	short chain dehydrogenase; Provisional	99.74
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.74
PRK06482	276	short chain dehydrogenase; Provisional	99.74
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.74
PRK10538	248	malonic semialdehyde reductase; Provisional	99.74
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.73
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.73
PRK05693	274	short chain dehydrogenase; Provisional	99.73
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.73
PRK07074	257	short chain dehydrogenase; Provisional	99.72
PRK12367	245	short chain dehydrogenase; Provisional	99.72
PRK07069	251	short chain dehydrogenase; Validated	99.71
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.71
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.71
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.71
PRK08324	681	short chain dehydrogenase; Validated	99.71
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.7
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.7
COG1028	251	FabG Dehydrogenases with different specificities (	99.69
PRK12742	237	oxidoreductase; Provisional	99.69
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.69
PRK09291	257	short chain dehydrogenase; Provisional	99.68
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.68
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.67
PRK07102	243	short chain dehydrogenase; Provisional	99.67
PRK08264	238	short chain dehydrogenase; Validated	99.67
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.67
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.67
PRK07041	230	short chain dehydrogenase; Provisional	99.67
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.67
PRK07060	245	short chain dehydrogenase; Provisional	99.66
PRK07023	243	short chain dehydrogenase; Provisional	99.66
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.66
PRK08177	225	short chain dehydrogenase; Provisional	99.65
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.65
PRK06924	251	short chain dehydrogenase; Provisional	99.64
PRK06101	240	short chain dehydrogenase; Provisional	99.64
PRK05884	223	short chain dehydrogenase; Provisional	99.63
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.63
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.62
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.62
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.61
PRK08017	256	oxidoreductase; Provisional	99.59
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.59
PLN03209	576	translocon at the inner envelope of chloroplast su	99.59
PRK06953	222	short chain dehydrogenase; Provisional	99.58
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.58
PRK07577	234	short chain dehydrogenase; Provisional	99.58
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.58
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.55
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.55
PRK07578	199	short chain dehydrogenase; Provisional	99.53
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.53
PLN02653	340	GDP-mannose 4,6-dehydratase	99.53
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.53
PRK08219	227	short chain dehydrogenase; Provisional	99.51
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.5
PLN02240	352	UDP-glucose 4-epimerase	99.49
PLN02214	342	cinnamoyl-CoA reductase	99.49
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.48
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.47
PLN02583	297	cinnamoyl-CoA reductase	99.46
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.46
PLN02650	351	dihydroflavonol-4-reductase	99.44
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.44
PLN00198	338	anthocyanidin reductase; Provisional	99.43
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.43
PLN02572	442	UDP-sulfoquinovose synthase	99.43
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.42
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.4
PRK08309	177	short chain dehydrogenase; Provisional	99.37
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.37
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.35
PLN02686	367	cinnamoyl-CoA reductase	99.34
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.33
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.32
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.32
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.3
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.29
PLN02427	386	UDP-apiose/xylose synthase	99.28
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.23
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.21
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.21
CHL00194	317	ycf39 Ycf39; Provisional	99.2
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.16
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.15
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.15
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.14
PLN02260	668	probable rhamnose biosynthetic enzyme	99.13
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.12
PRK12548	289	shikimate 5-dehydrogenase; Provisional	99.12
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.11
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.11
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.1
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.09
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	99.07
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.07
PRK05865	854	hypothetical protein; Provisional	99.04
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.02
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	98.96
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	98.95
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	98.95
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.94
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	98.93
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	98.92
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	98.91
PLN02996	491	fatty acyl-CoA reductase	98.9
PLN02206	442	UDP-glucuronate decarboxylase	98.9
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	98.89
PLN02166	436	dTDP-glucose 4,6-dehydratase	98.86
PLN02503	605	fatty acyl-CoA reductase 2	98.86
PLN02778	298	3,5-epimerase/4-reductase	98.86
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	98.85
PRK12320	699	hypothetical protein; Provisional	98.83
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	98.82
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.82
PRK07201	657	short chain dehydrogenase; Provisional	98.8
COG3320	382	Putative dehydrogenase domain of multifunctional n	98.74
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	98.72
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.67
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.66
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	98.63
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.62
PLN02260	668	probable rhamnose biosynthetic enzyme	98.62
PRK09620	229	hypothetical protein; Provisional	98.6
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.57
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.56
PLN00016	378	RNA-binding protein; Provisional	98.5
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.48
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	98.46
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.44
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	98.43
PRK14982	340	acyl-ACP reductase; Provisional	98.42
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	98.42
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.41
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.37
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.3
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.27
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.23
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	98.18
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	98.14
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	98.12
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.98
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	97.98
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.93
PRK06849	389	hypothetical protein; Provisional	97.88
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.86
COG2910	211	Putative NADH-flavin reductase [General function p	97.85
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.81
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.79
COG3268	382	Uncharacterized conserved protein [Function unknow	97.78
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.72
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.71
COG4982	866	3-oxoacyl-[acyl-carrier protein]	97.69
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.68
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.68
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.68
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.68
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.66
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.65
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	97.64
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.63
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.61
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.59
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.58
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.57
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.57
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.54
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.52
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.5
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.49
PRK09496	453	trkA potassium transporter peripheral membrane com	97.48
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.48
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	97.46
PTZ00325	321	malate dehydrogenase; Provisional	97.43
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	97.42
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.41
PLN00106	323	malate dehydrogenase	97.4
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.39
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.39
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.39
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.37
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	97.37
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	97.36
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.36
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.33
PLN00203	519	glutamyl-tRNA reductase	97.33
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	97.31
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	97.31
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	97.27
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.27
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	97.24
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	97.23
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.22
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	97.21
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.21
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.21
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.2
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.2
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.17
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	97.17
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.15
PRK08223	287	hypothetical protein; Validated	97.14
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.13
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	97.12
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	97.12
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.12
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.11
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.11
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	97.08
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	97.08
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	97.04
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	97.02
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	97.01
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	97.0
PRK08328	231	hypothetical protein; Provisional	97.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	96.98
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.97
PRK09496	453	trkA potassium transporter peripheral membrane com	96.97
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	96.97
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	96.96
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.96
PRK04148	134	hypothetical protein; Provisional	96.94
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	96.94
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	96.93
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.91
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.87
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.85
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.84
PLN02586	360	probable cinnamyl alcohol dehydrogenase	96.84
PRK05086	312	malate dehydrogenase; Provisional	96.83
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.83
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	96.82
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	96.8
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.79
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.79
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.78
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	96.78
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	96.78
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	96.78
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	96.77
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.74
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.74
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	96.72
PLN02178	375	cinnamyl-alcohol dehydrogenase	96.71
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.7
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	96.69
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.69
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.68
PRK07411	390	hypothetical protein; Validated	96.67
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.67
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.65
PTZ00354	334	alcohol dehydrogenase; Provisional	96.65
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.64
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	96.63
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.63
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	96.62
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.61
PRK14851	679	hypothetical protein; Provisional	96.61
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	96.59
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.57
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.56
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	96.56
PLN02740	381	Alcohol dehydrogenase-like	96.55
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.55
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	96.54
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	96.53
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.53
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	96.53
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.53
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.52
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	96.52
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.51
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	96.51
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	96.51
PRK10669	558	putative cation:proton antiport protein; Provision	96.51
PRK12480	330	D-lactate dehydrogenase; Provisional	96.51
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.51
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.5
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	96.5
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	96.49
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.48
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.46
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	96.46
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	96.45
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.45
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	96.44
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.44
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.43
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.43
PTZ00075	476	Adenosylhomocysteinase; Provisional	96.43
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	96.41
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	96.41
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	96.4
PLN02494	477	adenosylhomocysteinase	96.38
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	96.35
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	96.34
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	96.32
COG2263	198	Predicted RNA methylase [Translation, ribosomal st	96.32
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	96.31
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.31
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.3
PRK07877	722	hypothetical protein; Provisional	96.3
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.27
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.25
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.25
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	96.24
PRK06153	393	hypothetical protein; Provisional	96.24
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.22
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.21
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	96.21
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	96.19
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	96.19
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	96.17
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	96.17
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	96.16
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.15
PTZ00117	319	malate dehydrogenase; Provisional	96.14
PRK14852	989	hypothetical protein; Provisional	96.14
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	96.13
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	96.12
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.12
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.11
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.11
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.09
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.09
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	96.05
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.04
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	96.04
PLN02928	347	oxidoreductase family protein	96.03
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	96.02
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	96.02
PRK08655	437	prephenate dehydrogenase; Provisional	96.02
PRK14171	288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.02

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.93  E-value=2e-25  Score=155.22  Aligned_cols=113  Identities=25%  Similarity=0.292  Sum_probs=101.4

Q ss_pred             ccccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc-CC-eEEEEeccCCCHHHHHHHHHHH
Q 033396            7 KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GL-QVSGNACDLKIRAQREKLMETV   84 (120)
Q Consensus         7 ~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~   84 (120)
                      .+..+.+|+++||||++|||.++|++|++.|++++++.|...+++...+++++. .. +++.+++|++|++++.++++.+
T Consensus         6 ~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~   85 (282)
T KOG1205|consen    6 FMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWA   85 (282)
T ss_pred             cHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHH
Confidence            345689999999999999999999999999999999999988888888888765 33 4999999999999999999999


Q ss_pred             HhhcCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           85 SSQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        85 ~~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      ..++ |++|+||||||+...           ++.|++|++|+.+++|
T Consensus        86 ~~~f-g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk  131 (282)
T KOG1205|consen   86 IRHF-GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTK  131 (282)
T ss_pred             HHhc-CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHH
Confidence            9999 999999999999772           4689999999988765

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.92  E-value=5.1e-25  Score=149.23  Aligned_cols=108  Identities=32%  Similarity=0.419  Sum_probs=98.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ..++|+++||||++|||.++|++|+++|++|++++|..+.++++..++..  +.+..+..|++|++++.++++.+.+.| 
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~~-   79 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEEF-   79 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHhh-
Confidence            35789999999999999999999999999999999999999999988855  678999999999999999999999999 


Q ss_pred             CcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                      +++|+||||||+..           |.+.+++|+.|.++.++
T Consensus        80 g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~  121 (246)
T COG4221          80 GRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTR  121 (246)
T ss_pred             CcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999966           56789999999887653

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.91  E-value=2.4e-24  Score=148.84  Aligned_cols=109  Identities=26%  Similarity=0.335  Sum_probs=98.5

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc-CCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ++.+++++||||++|||.++|++|+++|++|+++.|+.+.++++.++++.. +..+.++.+|+++++++.++.+++....
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            467899999999999999999999999999999999999999999999875 7899999999999999999999999987


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                       ++||+||||||+..+           .+.+++|+.++..++
T Consensus        83 -~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT  123 (265)
T COG0300          83 -GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLT  123 (265)
T ss_pred             -CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHH
Confidence             799999999999885           355778887776654

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.91  E-value=3.7e-24  Score=148.48  Aligned_cols=112  Identities=25%  Similarity=0.390  Sum_probs=102.8

Q ss_pred             ccccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396            7 KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus         7 ~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      ++.+.+|++++||||++|||+++|.+|+++|+++++.|.+....++..++++..| +++.+.||+++.+++.+..+++++
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk~  110 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKVKK  110 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999999998888888887765 899999999999999999999999


Q ss_pred             hcCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           87 QFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      .. |++|+||||||+...           ++.+++|+.|.|..+|
T Consensus       111 e~-G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~k  154 (300)
T KOG1201|consen  111 EV-GDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTK  154 (300)
T ss_pred             hc-CCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHH
Confidence            99 899999999999873           5778999999988764

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.6e-22  Score=138.15  Aligned_cols=110  Identities=25%  Similarity=0.326  Sum_probs=97.7

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++++|+++|||+++|||.+++++|++.|++|++++|+++++++..+++...+.++.++.+|+++++++.++++++.+.+
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERF   81 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            45678999999999999999999999999999999999888888888887777789999999999999999999999999


Q ss_pred             CCcccEEEecCCCCC------------ccceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPY------------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~------------~~~~~~~n~~g~~~~~  119 (120)
                       +++|+||||||+..            +.+.+++|+.+++.++
T Consensus        82 -~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~  123 (254)
T PRK07478         82 -GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGA  123 (254)
T ss_pred             -CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence             89999999999853            2456789998888764

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3.2e-22  Score=139.77  Aligned_cols=110  Identities=25%  Similarity=0.424  Sum_probs=97.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|++++.++++++.+.+ 
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-   81 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLL-   81 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHc-
Confidence            4679999999999999999999999999999999999888887777787667788999999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      |++|+||||||+...           ++.+++|+.|++++++
T Consensus        82 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  123 (275)
T PRK05876         82 GHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVE  123 (275)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence            899999999998542           4557899999887653

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3.8e-22  Score=137.39  Aligned_cols=111  Identities=26%  Similarity=0.388  Sum_probs=98.4

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++++|+++|||+++|||.+++++|+++|++|++++|+.+.+++..+++...+.++..+.+|++++++++++++++.+.+
T Consensus         5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T PRK05867          5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL   84 (253)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            34789999999999999999999999999999999999888888888887777788899999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                       +++|+||||+|....           .+.+++|+.+++.++|
T Consensus        85 -g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  126 (253)
T PRK05867         85 -GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQ  126 (253)
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHH
Confidence             899999999998642           4557899999887653

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.87  E-value=4.5e-22  Score=142.41  Aligned_cols=110  Identities=23%  Similarity=0.278  Sum_probs=98.6

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus         3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~   82 (330)
T PRK06139          3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFG   82 (330)
T ss_pred             cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            45789999999999999999999999999999999999988888888888778889999999999999999999999988


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                       |++|++|||||+...           ++.+++|+.|+++++
T Consensus        83 -g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~  123 (330)
T PRK06139         83 -GRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDA  123 (330)
T ss_pred             -CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHH
Confidence             899999999998653           345789999887764

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.87  E-value=9.6e-22  Score=139.48  Aligned_cols=111  Identities=27%  Similarity=0.322  Sum_probs=100.7

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCHHHHHHHHHHHH
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      ..++.+++++|||+++|||.++|++|+.+|++|++..|+....++..+++...  ..++.++.+|+++..++.++.+++.
T Consensus        30 ~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~  109 (314)
T KOG1208|consen   30 GIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFK  109 (314)
T ss_pred             cccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999998888888888763  5788899999999999999999999


Q ss_pred             hhcCCcccEEEecCCCCCc---------cceeeeeccceeccc
Q 033396           86 SQFDGKLNILVSSAQLPYS---------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~~---------~~~~~~n~~g~~~~~  119 (120)
                      +.+ +++|++|||||+...         +..+.+|+.|+|.++
T Consensus       110 ~~~-~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt  151 (314)
T KOG1208|consen  110 KKE-GPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLT  151 (314)
T ss_pred             hcC-CCccEEEeCcccccCCcccCccchhheehhhhHHHHHHH
Confidence            988 899999999999773         567899999999876

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.87  E-value=7e-22  Score=140.35  Aligned_cols=111  Identities=24%  Similarity=0.282  Sum_probs=96.9

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCHHHHHHHHHHHH
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      ..++++|+++||||++|||.+++++|+++|++|++++|+....++..+++...  +..+.++.+|+++.++++++++++.
T Consensus         9 ~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~   88 (313)
T PRK05854          9 VPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLR   88 (313)
T ss_pred             CcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHH
Confidence            44588999999999999999999999999999999999988887777777653  3568899999999999999999999


Q ss_pred             hhcCCcccEEEecCCCCCc----------cceeeeeccceeccc
Q 033396           86 SQFDGKLNILVSSAQLPYS----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~~----------~~~~~~n~~g~~~~~  119 (120)
                      +.+ +++|+||||||+...          +..+.+|+.|++.++
T Consensus        89 ~~~-~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~  131 (313)
T PRK05854         89 AEG-RPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALT  131 (313)
T ss_pred             HhC-CCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHH
Confidence            988 899999999998642          345899999988765

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.87  E-value=7.1e-22  Score=138.70  Aligned_cols=110  Identities=25%  Similarity=0.312  Sum_probs=96.1

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh---------HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE---------TELNQRIQEWKSKGLQVSGNACDLKIRAQREKL   80 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   80 (120)
                      .+++|+++||||++|||++++++|+++|++|++++++.         ..+++..+++...+.++..+.+|++|++++.++
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   82 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL   82 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence            36799999999999999999999999999999998765         556677777776677888999999999999999


Q ss_pred             HHHHHhhcCCcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           81 METVSSQFDGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        81 ~~~~~~~~~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                      ++++.+.+ |++|+||||||+..           +++.+++|+.|+++++|
T Consensus        83 ~~~~~~~~-g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  132 (286)
T PRK07791         83 VDAAVETF-GGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLR  132 (286)
T ss_pred             HHHHHHhc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHH
Confidence            99999999 89999999999865           25668999999887753

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.87  E-value=1.4e-21  Score=134.80  Aligned_cols=109  Identities=17%  Similarity=0.251  Sum_probs=92.6

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++++|+++||||++|||++++++|+++|++|++++|+..  ++..+.+...+.++.++.+|++++++++++++++.+.+
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVM   81 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999999999988643  23334444557788999999999999999999999999


Q ss_pred             CCcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                       |++|+||||||+..           |++.+++|+.++++++|
T Consensus        82 -g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~  123 (251)
T PRK12481         82 -GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQ  123 (251)
T ss_pred             -CCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHH
Confidence             89999999999855           35668999999987753

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.87  E-value=1.3e-21  Score=136.55  Aligned_cols=110  Identities=35%  Similarity=0.405  Sum_probs=97.1

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc---CCeEEEEeccCCCHHHHHHHHHHH
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK---GLQVSGNACDLKIRAQREKLMETV   84 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~   84 (120)
                      ++.+.+|+++|||+++|||+++|++|++.|++|++++|+.+.+++...++...   +.++..+.+|+++++.+++++++.
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~   82 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA   82 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999999888888777654   456999999999999999999999


Q ss_pred             HhhcCCcccEEEecCCCCC------------ccceeeeeccceec
Q 033396           85 SSQFDGKLNILVSSAQLPY------------SQRKFFVKSRGPYG  117 (120)
Q Consensus        85 ~~~~~g~id~li~~ag~~~------------~~~~~~~n~~g~~~  117 (120)
                      .+.+.|++|+||||||...            |.+++++|+.|.++
T Consensus        83 ~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~  127 (270)
T KOG0725|consen   83 VEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAF  127 (270)
T ss_pred             HHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHH
Confidence            9984399999999999977            35778999997444

>PRK08589 short chain dehydrogenase; Validated

Probab=99.86  E-value=1.7e-21  Score=135.69  Aligned_cols=108  Identities=24%  Similarity=0.380  Sum_probs=94.6

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      +++|+++|||+++|||++++++|+++|++|++++|+ +.+++..+++...+.++..+.+|+++++++.++++++.+.+ |
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g   81 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQF-G   81 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc-C
Confidence            678999999999999999999999999999999999 67777777776667789999999999999999999999999 8


Q ss_pred             cccEEEecCCCCCc------------cceeeeeccceecccC
Q 033396           91 KLNILVSSAQLPYS------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        91 ~id~li~~ag~~~~------------~~~~~~n~~g~~~~~~  120 (120)
                      ++|+||||||+...            .+.+++|+.|++.++|
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  123 (272)
T PRK08589         82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTK  123 (272)
T ss_pred             CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999998631            3456788888877653

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.1e-21  Score=134.08  Aligned_cols=110  Identities=26%  Similarity=0.360  Sum_probs=96.7

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh--cCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS--KGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .+++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++..  .+.++.++.+|+++++++.++++++.+.
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA   83 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            36799999999999999999999999999999999998888888887766  4667889999999999999999999999


Q ss_pred             cCCcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                      + +++|++|||||+..           +.+.+++|+.+++.++|
T Consensus        84 ~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  126 (260)
T PRK07063         84 F-GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCR  126 (260)
T ss_pred             h-CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHH
Confidence            9 89999999999754           24557889998887653

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.86  E-value=1.6e-21  Score=135.02  Aligned_cols=113  Identities=16%  Similarity=0.169  Sum_probs=90.1

Q ss_pred             cccccccCcEEEEecCC--CchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHH
Q 033396            6 EKRWSLKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMET   83 (120)
Q Consensus         6 ~~~~~~~~~~~litGa~--~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   83 (120)
                      ..++++++|+++|||++  +|||++++++|+++|++|++++|+....+ ..+++......+.++.+|++|++++++++++
T Consensus         3 ~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   81 (258)
T PRK07533          3 QPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YVEPLAEELDAPIFLPLDVREPGQLEAVFAR   81 (258)
T ss_pred             CcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HHHHHHHhhccceEEecCcCCHHHHHHHHHH
Confidence            34556899999999998  59999999999999999999999754322 2222322212356789999999999999999


Q ss_pred             HHhhcCCcccEEEecCCCCC---------------ccceeeeeccceecccC
Q 033396           84 VSSQFDGKLNILVSSAQLPY---------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        84 ~~~~~~g~id~li~~ag~~~---------------~~~~~~~n~~g~~~~~~  120 (120)
                      +.+++ |++|++|||||+..               +++.+++|+.|+++++|
T Consensus        82 ~~~~~-g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~  132 (258)
T PRK07533         82 IAEEW-GRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMAR  132 (258)
T ss_pred             HHHHc-CCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence            99999 89999999999753               24668999999988764

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.86  E-value=3.1e-21  Score=132.99  Aligned_cols=112  Identities=23%  Similarity=0.296  Sum_probs=96.7

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChH-HHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET-ELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      ++++++|+++|||+++|||++++++|+++|++|++++|+.+ .+++..+++...+.++..+.+|+++++++.++++++.+
T Consensus         3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   82 (254)
T PRK06114          3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEA   82 (254)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999998753 45666677766677788999999999999999999999


Q ss_pred             hcCCcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           87 QFDGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                      .+ +++|++|||+|+..           +++.+++|+.|+++++|
T Consensus        83 ~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  126 (254)
T PRK06114         83 EL-GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQ  126 (254)
T ss_pred             Hc-CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHH
Confidence            99 89999999999864           24668899999987653

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.8e-21  Score=132.83  Aligned_cols=109  Identities=14%  Similarity=0.174  Sum_probs=94.0

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++++|+++|||+++|||++++++|+++|++|++++|+...+++..+++.+.+..+..+.+|++++++++++++++.+.+ 
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   80 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQF-   80 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHh-
Confidence            4789999999999999999999999999999999999988888888887777778889999999999999999999999 


Q ss_pred             C-cccEEEecCCCCCc------------cceeeeeccceeccc
Q 033396           90 G-KLNILVSSAQLPYS------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g-~id~li~~ag~~~~------------~~~~~~n~~g~~~~~  119 (120)
                      | ++|++|||+|....            .+.+.+|+.+++.++
T Consensus        81 g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (227)
T PRK08862         81 NRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYG  123 (227)
T ss_pred             CCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHH
Confidence            6 99999999985431            234566777776553

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.6e-21  Score=134.28  Aligned_cols=109  Identities=28%  Similarity=0.301  Sum_probs=93.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc-CCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ++++|+++|||+++|||++++++|+++|++|++++|+...+++..+++... +.++.++.+|++|+++++++++++. .+
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~~   83 (263)
T PRK08339          5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-NI   83 (263)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-hh
Confidence            478999999999999999999999999999999999988877777776553 5678899999999999999999885 57


Q ss_pred             CCcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                       |++|++|||+|...           |.+.+++|+.+++.++|
T Consensus        84 -g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  125 (263)
T PRK08339         84 -GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTR  125 (263)
T ss_pred             -CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence             89999999999854           24667889988887653

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=3.3e-21  Score=136.49  Aligned_cols=113  Identities=27%  Similarity=0.361  Sum_probs=96.9

Q ss_pred             ccccccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHH
Q 033396            5 REKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMET   83 (120)
Q Consensus         5 ~~~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   83 (120)
                      +.+..++++|+++|||+++|||++++++|+++|++|++.++.. ...++..+++...+.++.++.+|+++++++.+++++
T Consensus         4 ~~~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~   83 (306)
T PRK07792          4 TTNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVAT   83 (306)
T ss_pred             ccCCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            3445678999999999999999999999999999999998754 456667777777788899999999999999999999


Q ss_pred             HHhhcCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           84 VSSQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        84 ~~~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +.+ + |++|+||||||+...           .+.+++|+.|+++++
T Consensus        84 ~~~-~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~  128 (306)
T PRK07792         84 AVG-L-GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLT  128 (306)
T ss_pred             HHH-h-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHH
Confidence            988 8 899999999998653           356788998888765

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.86  E-value=2.8e-21  Score=133.37  Aligned_cols=116  Identities=26%  Similarity=0.343  Sum_probs=97.3

Q ss_pred             cccccccccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHH
Q 033396            2 SDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLM   81 (120)
Q Consensus         2 ~~~~~~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   81 (120)
                      -+++...+.+++|+++||||+++||.+++++|++.|++|++++|+ .+.++..+.+...+.++.++.+|+++++++.+++
T Consensus         4 ~~~~~~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~   82 (258)
T PRK06935          4 DKFSMDFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVV   82 (258)
T ss_pred             hhhccccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            355556667899999999999999999999999999999999988 4555555555555677889999999999999999


Q ss_pred             HHHHhhcCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           82 ETVSSQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        82 ~~~~~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +++.+.+ +++|++|||+|....           ++.+++|+.+++.++
T Consensus        83 ~~~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  130 (258)
T PRK06935         83 KEALEEF-GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLS  130 (258)
T ss_pred             HHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHH
Confidence            9999999 899999999998542           355788888887665

>PRK06194 hypothetical protein; Provisional

Probab=99.86  E-value=4.2e-21  Score=134.26  Aligned_cols=109  Identities=24%  Similarity=0.359  Sum_probs=95.5

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++++|+++||||++|||++++++|+++|++|++++|+...+++..+++...+.++.++.+|++|++++.++++.+.+.+ 
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~-   81 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERF-   81 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            3568999999999999999999999999999999998877777777776667788899999999999999999999998 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +++|+||||||....           ...+++|+.|+++++
T Consensus        82 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~  122 (287)
T PRK06194         82 GAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGV  122 (287)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHH
Confidence            899999999999653           345789999988743

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.86  E-value=3.1e-21  Score=133.52  Aligned_cols=110  Identities=30%  Similarity=0.435  Sum_probs=94.6

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+.  +.++..+.+|++|++++.++++++.+
T Consensus         4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T PRK07062          4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEA   83 (265)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999988877777776654  35788999999999999999999999


Q ss_pred             hcCCcccEEEecCCCCC-----------ccceeeeeccceeccc
Q 033396           87 QFDGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~  119 (120)
                      .+ +++|+||||||+..           |.+.+++|+.+++.++
T Consensus        84 ~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  126 (265)
T PRK07062         84 RF-GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPT  126 (265)
T ss_pred             hc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            99 89999999999854           2455677888777654

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.85  E-value=4e-21  Score=132.28  Aligned_cols=111  Identities=18%  Similarity=0.375  Sum_probs=97.5

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++++|+++||||+++||++++++|+++|++|++++|+...+++..+++...+.++..+.+|+++++++.++++++.+.+
T Consensus         5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (254)
T PRK08085          5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI   84 (254)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            45789999999999999999999999999999999999888877777777667778889999999999999999999998


Q ss_pred             CCcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                       +++|++|||+|...           +++.+++|+.++++++|
T Consensus        85 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  126 (254)
T PRK08085         85 -GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQ  126 (254)
T ss_pred             -CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence             89999999999754           24568889888877653

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.85  E-value=4.4e-21  Score=134.10  Aligned_cols=108  Identities=19%  Similarity=0.247  Sum_probs=87.7

Q ss_pred             cccCcEEEEecCC--CchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHH-hcCCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396           10 SLKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK-SKGLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus        10 ~~~~~~~litGa~--~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      .+++|+++||||+  +|||++++++|+++|++|++++|+.. .++..+++. +.+.. ..+.+|++|+++++++++++.+
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~   79 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKK   79 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHH
Confidence            3679999999997  89999999999999999999999853 222233332 22333 5789999999999999999999


Q ss_pred             hcCCcccEEEecCCCCC---------------ccceeeeeccceecccC
Q 033396           87 QFDGKLNILVSSAQLPY---------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~---------------~~~~~~~n~~g~~~~~~  120 (120)
                      .+ |++|+||||||+..               +++.+++|+.|+++++|
T Consensus        80 ~~-g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  127 (274)
T PRK08415         80 DL-GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTR  127 (274)
T ss_pred             Hc-CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHH
Confidence            99 89999999999742               24678999999988764

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.85  E-value=4.9e-21  Score=131.91  Aligned_cols=111  Identities=28%  Similarity=0.419  Sum_probs=97.3

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      ++++++|+++|||++++||++++++|+++|++|++++|++.+.++..+.+...+.++..+.+|++|+++++++++++.+.
T Consensus         5 ~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (255)
T PRK07523          5 LFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAE   84 (255)
T ss_pred             ccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence            34578999999999999999999999999999999999988877777777766778999999999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      + +++|++|||+|....           ++.+.+|+.++++++
T Consensus        85 ~-~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  126 (255)
T PRK07523         85 I-GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVG  126 (255)
T ss_pred             c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            8 899999999998652           345678888887765

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.85  E-value=4.9e-21  Score=137.18  Aligned_cols=110  Identities=19%  Similarity=0.220  Sum_probs=97.6

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ..+++|+++||||++|||++++++|+++|++|++++|+++.+++..+++...+.++.++.+|++|+++++++++++.+++
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~   83 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEEL   83 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence            34788999999999999999999999999999999999888888888888778889999999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                       |++|++|||+|+..+           ++.+++|+.|+++++
T Consensus        84 -g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~  124 (334)
T PRK07109         84 -GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGT  124 (334)
T ss_pred             -CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHH
Confidence             899999999998642           355788888877654

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.85  E-value=5e-21  Score=132.11  Aligned_cols=107  Identities=16%  Similarity=0.216  Sum_probs=88.7

Q ss_pred             cccCcEEEEecCC--CchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           10 SLKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        10 ~~~~~~~litGa~--~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .+++|+++||||+  +|||++++++|+++|++|++++|+. +.++..+++.  +..+..+.+|++++++++++++++.++
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~   80 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV--DEEDLLVECDVASDESIERAFATIKER   80 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc--cCceeEEeCCCCCHHHHHHHHHHHHHH
Confidence            3689999999999  8999999999999999999999873 3433344432  345788999999999999999999999


Q ss_pred             cCCcccEEEecCCCCC---------------ccceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPY---------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~---------------~~~~~~~n~~g~~~~~~  120 (120)
                      + |++|+||||||+..               +.+.+++|+.+++.++|
T Consensus        81 ~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~  127 (252)
T PRK06079         81 V-GKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAK  127 (252)
T ss_pred             h-CCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHH
Confidence            9 89999999999753               24568899999887653

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.85  E-value=6.6e-21  Score=131.97  Aligned_cols=110  Identities=25%  Similarity=0.310  Sum_probs=91.1

Q ss_pred             cccCcEEEEecCC--CchHHHHHHHHHHCCCEEEEeeCChH--HHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHH
Q 033396           10 SLKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNET--ELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus        10 ~~~~~~~litGa~--~~ig~~~a~~l~~~g~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      ++++|+++||||+  +|||++++++|+++|++|+++.++..  ..++..+++...+..+.++.+|++|+++++++++++.
T Consensus         3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~   82 (258)
T PRK07370          3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIK   82 (258)
T ss_pred             ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHH
Confidence            4689999999986  89999999999999999998876432  3444555565555567789999999999999999999


Q ss_pred             hhcCCcccEEEecCCCCC---------------ccceeeeeccceecccC
Q 033396           86 SQFDGKLNILVSSAQLPY---------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~---------------~~~~~~~n~~g~~~~~~  120 (120)
                      +.+ |++|+||||+|+..               |++.+++|+.|++.++|
T Consensus        83 ~~~-g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~  131 (258)
T PRK07370         83 QKW-GKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCK  131 (258)
T ss_pred             HHc-CCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHH
Confidence            999 89999999999752               25678999999988764

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.85  E-value=7e-21  Score=132.67  Aligned_cols=114  Identities=26%  Similarity=0.293  Sum_probs=97.9

Q ss_pred             ccccccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHH
Q 033396            5 REKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETV   84 (120)
Q Consensus         5 ~~~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (120)
                      +...+++++|+++|||++++||++++++|+++|++|++++|+.+..++..+++...+.++.++.+|+++++++.++++++
T Consensus         2 ~~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   81 (278)
T PRK08277          2 MPNLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQI   81 (278)
T ss_pred             CCceeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            33445688999999999999999999999999999999999988787777777766778899999999999999999999


Q ss_pred             HhhcCCcccEEEecCCCCC--------------------------ccceeeeeccceeccc
Q 033396           85 SSQFDGKLNILVSSAQLPY--------------------------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        85 ~~~~~g~id~li~~ag~~~--------------------------~~~~~~~n~~g~~~~~  119 (120)
                      .+.+ +++|++|||+|...                          +.+.+++|+.+++.++
T Consensus        82 ~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  141 (278)
T PRK08277         82 LEDF-GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPT  141 (278)
T ss_pred             HHHc-CCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHH
Confidence            9999 89999999999643                          2345778888887654

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.85  E-value=4.8e-21  Score=135.01  Aligned_cols=111  Identities=25%  Similarity=0.322  Sum_probs=95.4

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +.++++|+++|||+++|||.+++++|++.|++|++++|+.+.+++..+++.. +..+..+.+|++|++++.++++++.+.
T Consensus         4 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~   82 (296)
T PRK05872          4 MTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAVER   82 (296)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999998888777776643 456777789999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      + +++|++|||+|+...           ++.+++|+.|+++++|
T Consensus        83 ~-g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~  125 (296)
T PRK05872         83 F-GGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVR  125 (296)
T ss_pred             c-CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            9 899999999998642           4567899999887653

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.85  E-value=4.6e-21  Score=135.85  Aligned_cols=110  Identities=25%  Similarity=0.283  Sum_probs=91.3

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh----------HHHHHHHHHHHhcCCeEEEEeccCCCHHHHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE----------TELNQRIQEWKSKGLQVSGNACDLKIRAQRE   78 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   78 (120)
                      .++++|+++||||++|||++++++|++.|++|++++|+.          +.+++..+.+...+.++.++.+|++++++++
T Consensus         4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~   83 (305)
T PRK08303          4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVR   83 (305)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence            447899999999999999999999999999999999873          3345555666666777889999999999999


Q ss_pred             HHHHHHHhhcCCcccEEEecC-CCC------C---------ccceeeeeccceeccc
Q 033396           79 KLMETVSSQFDGKLNILVSSA-QLP------Y---------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        79 ~~~~~~~~~~~g~id~li~~a-g~~------~---------~~~~~~~n~~g~~~~~  119 (120)
                      ++++++.+.+ |++|+||||+ |+.      .         +.+.+++|+.+++.++
T Consensus        84 ~~~~~~~~~~-g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  139 (305)
T PRK08303         84 ALVERIDREQ-GRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITS  139 (305)
T ss_pred             HHHHHHHHHc-CCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHH
Confidence            9999999999 8999999999 752      1         1244677888887765

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.1e-20  Score=133.49  Aligned_cols=111  Identities=23%  Similarity=0.316  Sum_probs=95.1

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCHHHHHHHHHHHH
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      +.++++|+++||||++|||.+++++|+++|++|++++|+....++..+++...  +.++.++.+|+++.++++++++++.
T Consensus        11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~   90 (306)
T PRK06197         11 IPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALR   90 (306)
T ss_pred             cccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999987776666666543  4578899999999999999999999


Q ss_pred             hhcCCcccEEEecCCCCC---------ccceeeeeccceeccc
Q 033396           86 SQFDGKLNILVSSAQLPY---------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~---------~~~~~~~n~~g~~~~~  119 (120)
                      +.+ +++|+||||||+..         +...+++|+.|++.++
T Consensus        91 ~~~-~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~  132 (306)
T PRK06197         91 AAY-PRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALT  132 (306)
T ss_pred             hhC-CCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHH
Confidence            998 89999999999753         2456889999987764

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.85  E-value=7.9e-21  Score=131.69  Aligned_cols=112  Identities=23%  Similarity=0.443  Sum_probs=98.1

Q ss_pred             ccccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396            7 KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus         7 ~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      ..+++++|+++|||++++||.+++++|+++|++|++++|+...+++..+.+...+.++..+.+|+++++++.++++++.+
T Consensus         4 ~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (265)
T PRK07097          4 NLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEK   83 (265)
T ss_pred             cccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            44568999999999999999999999999999999999998888777777776677899999999999999999999999


Q ss_pred             hcCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           87 QFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      .+ +++|+||||+|+...           .+.+++|+.|++.++
T Consensus        84 ~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  126 (265)
T PRK07097         84 EV-GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVS  126 (265)
T ss_pred             hC-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHH
Confidence            99 899999999998652           455678888877654

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.85  E-value=6.6e-21  Score=132.46  Aligned_cols=108  Identities=19%  Similarity=0.233  Sum_probs=88.7

Q ss_pred             ccCcEEEEecCCC--chHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           11 LKGMTALVTGGTK--GIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        11 ~~~~~~litGa~~--~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++|+++||||++  |||++++++|+++|++|++++|+ ...++..+++......+..+.+|++|+++++++++++.+.+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW   82 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence            6799999999986  99999999999999999999887 34444555555444456788999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc----------------cceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPYS----------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~~----------------~~~~~~n~~g~~~~~~  120 (120)
                       |++|++|||||+...                ++.+++|+.|++.++|
T Consensus        83 -g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  129 (262)
T PRK07984         83 -PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAK  129 (262)
T ss_pred             -CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHH
Confidence             899999999997531                3457889988877653

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.85  E-value=8.7e-21  Score=132.35  Aligned_cols=107  Identities=19%  Similarity=0.276  Sum_probs=87.0

Q ss_pred             ccCcEEEEecCCC--chHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh-cCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           11 LKGMTALVTGGTK--GIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        11 ~~~~~~litGa~~--~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +++|+++|||+++  |||+++|++|+++|++|++++|+....+. .+++.. .+. ...+.+|++|+++++++++++.++
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~g~-~~~~~~Dv~d~~~v~~~~~~~~~~   82 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESLGS-DFVLPCDVEDIASVDAVFEALEKK   82 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhcCC-ceEEeCCCCCHHHHHHHHHHHHHH
Confidence            6899999999996  99999999999999999999987543322 233322 233 357899999999999999999999


Q ss_pred             cCCcccEEEecCCCCC---------------ccceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPY---------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~---------------~~~~~~~n~~g~~~~~~  120 (120)
                      + |++|+||||||+..               |.+.+++|+.++++++|
T Consensus        83 ~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~  129 (271)
T PRK06505         83 W-GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAK  129 (271)
T ss_pred             h-CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHH
Confidence            9 89999999999753               24568899999887653

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.85  E-value=5.6e-21  Score=123.91  Aligned_cols=105  Identities=35%  Similarity=0.489  Sum_probs=93.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCC--hHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRN--ETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      |+++||||++|||++++++|+++|. .|++++|+  .+..++...++...+.++.++.+|++++++++++++++.+.+ +
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   79 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRF-G   79 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHH-S
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccc-c
Confidence            6899999999999999999999964 78888998  666778888888888999999999999999999999999888 8


Q ss_pred             cccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           91 KLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        91 ~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      ++|++|||+|....           .+.+.+|+.+++.+.
T Consensus        80 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  119 (167)
T PF00106_consen   80 PLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLA  119 (167)
T ss_dssp             SESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHH
T ss_pred             cccccccccccccccccccccchhhhhccccccceeeeee
Confidence            99999999999883           466788888887764

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.84  E-value=1.7e-20  Score=129.77  Aligned_cols=107  Identities=31%  Similarity=0.374  Sum_probs=91.8

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+++|+++|||+++|||++++++|+++|++|++++|+.+.++++.+++   +.++.++.+|++++++++++++++.+.+ 
T Consensus         3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   78 (263)
T PRK06200          3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDAF-   78 (263)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHhc-
Confidence            367899999999999999999999999999999999987766555443   4567889999999999999999999998 


Q ss_pred             CcccEEEecCCCCC----------------ccceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPY----------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~----------------~~~~~~~n~~g~~~~~~  120 (120)
                      +++|+||||+|+..                |++.+++|+.+++.++|
T Consensus        79 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  125 (263)
T PRK06200         79 GKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAK  125 (263)
T ss_pred             CCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHH
Confidence            89999999999743                23568999999887653

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.84  E-value=1.5e-20  Score=122.16  Aligned_cols=108  Identities=31%  Similarity=0.426  Sum_probs=96.7

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .+.++-+++|||+.+|+|++.+++|+++|+.|++.|.....-.+..+++   |.++.+.+.|++++++++.++..++.+|
T Consensus         5 rs~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel---g~~~vf~padvtsekdv~aala~ak~kf   81 (260)
T KOG1199|consen    5 RSTKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL---GGKVVFTPADVTSEKDVRAALAKAKAKF   81 (260)
T ss_pred             hhhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh---CCceEEeccccCcHHHHHHHHHHHHhhc
Confidence            3578899999999999999999999999999999998766555555554   8999999999999999999999999999


Q ss_pred             CCcccEEEecCCCCC-----------------ccceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPY-----------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~-----------------~~~~~~~n~~g~~~~~~  120 (120)
                       |++|.+|||||+-.                 +++.+++|+.|+|++++
T Consensus        82 -grld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvir  129 (260)
T KOG1199|consen   82 -GRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIR  129 (260)
T ss_pred             -cceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeee
Confidence             99999999999865                 36889999999999875

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.84  E-value=9.1e-21  Score=134.87  Aligned_cols=110  Identities=18%  Similarity=0.122  Sum_probs=94.1

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+.+|+++||||++|||.+++++|+++|++|++++|+....++..+++...+.++.++.+|+++++++.++++++.+.. 
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-   81 (322)
T PRK07453          3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALG-   81 (322)
T ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhC-
Confidence            3568999999999999999999999999999999999888777777775445678899999999999999999987766 


Q ss_pred             CcccEEEecCCCCC------------ccceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPY------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~------------~~~~~~~n~~g~~~~~~  120 (120)
                      +++|+||||||+..            ++..+++|+.|++++++
T Consensus        82 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  124 (322)
T PRK07453         82 KPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCN  124 (322)
T ss_pred             CCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHH
Confidence            78999999999743            24558899999887753

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.1e-20  Score=130.87  Aligned_cols=107  Identities=28%  Similarity=0.244  Sum_probs=91.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++++|+++|||+++|||++++++|+++|++|++++|+...+++..+++   +.++.++.+|+++++++.++++++.+.+ 
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   78 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL---GERARFIATDITDDAAIERAVATVVARF-   78 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCeeEEEEecCCCHHHHHHHHHHHHHHh-
Confidence            367899999999999999999999999999999999987666655544   5578899999999999999999999999 


Q ss_pred             CcccEEEecCCCCC----------ccceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPY----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~----------~~~~~~~n~~g~~~~~~  120 (120)
                      +++|+||||+|+..          +.+.+++|+.+++.++|
T Consensus        79 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  119 (261)
T PRK08265         79 GRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQ  119 (261)
T ss_pred             CCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHH
Confidence            89999999999753          24567889888887653

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.6e-20  Score=132.38  Aligned_cols=110  Identities=27%  Similarity=0.393  Sum_probs=95.9

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+..+.++.+|++|++++.++++++.+.+
T Consensus        36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  115 (293)
T PRK05866         36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRI  115 (293)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45788999999999999999999999999999999999888887777776667778899999999999999999999998


Q ss_pred             CCcccEEEecCCCCCc-------------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-------------~~~~~~n~~g~~~~~  119 (120)
                       +++|++|||||....             ...+++|+.|++.++
T Consensus       116 -g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~  158 (293)
T PRK05866        116 -GGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLI  158 (293)
T ss_pred             -CCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHH
Confidence             899999999998643             234677888877654

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.84  E-value=4.8e-21  Score=126.93  Aligned_cols=106  Identities=27%  Similarity=0.496  Sum_probs=92.8

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      |.+.|.+++||||++|||++++++|.+.|.+|++++|++..+.+..++    ....+...||+.|.++.+.+++.+++.+
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~----~p~~~t~v~Dv~d~~~~~~lvewLkk~~   76 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE----NPEIHTEVCDVADRDSRRELVEWLKKEY   76 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc----CcchheeeecccchhhHHHHHHHHHhhC
Confidence            346789999999999999999999999999999999999988877765    4567788899999999999999999999


Q ss_pred             CCcccEEEecCCCCCc-------------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-------------~~~~~~n~~g~~~~~  119 (120)
                       +.+|+||||||+...             ...+.+|+.+|..++
T Consensus        77 -P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt  119 (245)
T COG3967          77 -PNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLT  119 (245)
T ss_pred             -CchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHH
Confidence             899999999999773             234678888887665

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.84  E-value=9.9e-21  Score=131.98  Aligned_cols=111  Identities=23%  Similarity=0.289  Sum_probs=94.1

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH-------HHHHHHHHHhcCCeEEEEeccCCCHHHHHHHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-------LNQRIQEWKSKGLQVSGNACDLKIRAQREKLM   81 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   81 (120)
                      +++++|+++||||++|||.+++++|+++|++|++++|+.+.       +++..+++...+.++.++.+|+++++++.+++
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~   81 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAV   81 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence            34688999999999999999999999999999999987532       34455566666778999999999999999999


Q ss_pred             HHHHhhcCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           82 ETVSSQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        82 ~~~~~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      +++.+.+ +++|++|||+|+...           .+.+++|+.|+++++|
T Consensus        82 ~~~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~  130 (273)
T PRK08278         82 AKAVERF-GGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQ  130 (273)
T ss_pred             HHHHHHh-CCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHH
Confidence            9999998 899999999998542           4567799999887753

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.84  E-value=1.6e-20  Score=129.36  Aligned_cols=116  Identities=26%  Similarity=0.368  Sum_probs=99.1

Q ss_pred             CcccccccccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHH
Q 033396            1 MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKL   80 (120)
Q Consensus         1 ~~~~~~~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   80 (120)
                      |+.+.  ++.+++|+++|||++++||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|+++++++.++
T Consensus         1 ~~~~~--~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   78 (256)
T PRK06124          1 MSILQ--RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAA   78 (256)
T ss_pred             CCccc--ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence            44444  3447899999999999999999999999999999999998887777777777777789999999999999999


Q ss_pred             HHHHHhhcCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           81 METVSSQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        81 ~~~~~~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      ++++.+.+ +++|++|||+|....           ++.+.+|+.+++.++
T Consensus        79 ~~~~~~~~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  127 (256)
T PRK06124         79 FARIDAEH-GRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLS  127 (256)
T ss_pred             HHHHHHhc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            99999999 899999999998652           345778888877665

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.84  E-value=2.2e-20  Score=129.28  Aligned_cols=107  Identities=26%  Similarity=0.408  Sum_probs=91.0

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.++++.+.   .+.++..+.+|+++.+++.++++++.+.+ 
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   77 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA---HGDAVVGVEGDVRSLDDHKEAVARCVAAF-   77 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh---cCCceEEEEeccCCHHHHHHHHHHHHHHh-
Confidence            36789999999999999999999999999999999987665554332   25568889999999999999999999999 


Q ss_pred             CcccEEEecCCCCC----------------ccceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPY----------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~----------------~~~~~~~n~~g~~~~~~  120 (120)
                      +++|+||||||+..                |++.+++|+.++++++|
T Consensus        78 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  124 (262)
T TIGR03325        78 GKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVK  124 (262)
T ss_pred             CCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHH
Confidence            89999999999742                23678999999987753

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.84  E-value=7.2e-21  Score=125.36  Aligned_cols=109  Identities=24%  Similarity=0.324  Sum_probs=97.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+..|.++|||+++|||++++..|++.|++|++.+++....++....+...+ ....+.||++++.+++..+++..+++ 
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~-~h~aF~~DVS~a~~v~~~l~e~~k~~-   88 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYG-DHSAFSCDVSKAHDVQNTLEEMEKSL-   88 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCC-ccceeeeccCcHHHHHHHHHHHHHhc-
Confidence            4678999999999999999999999999999999999988888887776553 45678999999999999999999999 


Q ss_pred             CcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                      |++++||||||+..           |...+.+|+.|.|.++|
T Consensus        89 g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tq  130 (256)
T KOG1200|consen   89 GTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQ  130 (256)
T ss_pred             CCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHH
Confidence            89999999999987           46788999999998764

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.9e-20  Score=128.75  Aligned_cols=110  Identities=25%  Similarity=0.359  Sum_probs=95.8

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +.+++|+++|||++++||.+++++|+++|++|++++|+.+++++..+++...+.++..+.+|+++++++.++++++.+.+
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   82 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY   82 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            44789999999999999999999999999999999999888777777777677789999999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc------------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~------------~~~~~~n~~g~~~~~  119 (120)
                       +++|++|||+|+...            .+.+++|+.+++.++
T Consensus        83 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  124 (253)
T PRK06172         83 -GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCM  124 (253)
T ss_pred             -CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHH
Confidence             899999999998531            345778888876654

>PRK05717 oxidoreductase; Validated

Probab=99.84  E-value=1.9e-20  Score=129.04  Aligned_cols=112  Identities=28%  Similarity=0.268  Sum_probs=93.3

Q ss_pred             ccccccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHH
Q 033396            5 REKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETV   84 (120)
Q Consensus         5 ~~~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (120)
                      +++..++++|+++|||++++||++++++|+++|++|++++++.....+..+++   +..+.++.+|+++++++.++++++
T Consensus         2 ~~~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~   78 (255)
T PRK05717          2 SEPNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL---GENAWFIAMDVADEAQVAAGVAEV   78 (255)
T ss_pred             CCCCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHH
Confidence            34455688999999999999999999999999999999998876655443332   456889999999999999999999


Q ss_pred             HhhcCCcccEEEecCCCCCc-------------cceeeeeccceecccC
Q 033396           85 SSQFDGKLNILVSSAQLPYS-------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        85 ~~~~~g~id~li~~ag~~~~-------------~~~~~~n~~g~~~~~~  120 (120)
                      .+.+ |++|++|||+|+...             ...+++|+.+++++++
T Consensus        79 ~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  126 (255)
T PRK05717         79 LGQF-GRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAK  126 (255)
T ss_pred             HHHh-CCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            9998 899999999998642             3567899998887653

>PLN02253 xanthoxin dehydrogenase

Probab=99.84  E-value=1.9e-20  Score=130.65  Aligned_cols=109  Identities=26%  Similarity=0.374  Sum_probs=93.3

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ..+++|+++|||++++||.+++++|+++|++|++++++....++..+++.. +.++.++.+|++|+++++++++++.+.+
T Consensus        14 ~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   92 (280)
T PLN02253         14 QRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG-EPNVCFFHCDVTVEDDVSRAVDFTVDKF   92 (280)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC-CCceEEEEeecCCHHHHHHHHHHHHHHh
Confidence            357899999999999999999999999999999999987766666655532 4578899999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc-------------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-------------~~~~~~n~~g~~~~~  119 (120)
                       +++|+||||||....             +..+++|+.|+++++
T Consensus        93 -g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~  135 (280)
T PLN02253         93 -GTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGM  135 (280)
T ss_pred             -CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHH
Confidence             899999999998531             356899999988764

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.9e-20  Score=128.85  Aligned_cols=109  Identities=23%  Similarity=0.258  Sum_probs=95.0

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+++|+++||||+++||++++++|+++|++|++++|++...++..+++...+.++.++.+|+++++++.++++++.+.+ 
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   80 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERF-   80 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHc-
Confidence            3578999999999999999999999999999999999888777777776667788999999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc------------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~------------~~~~~~n~~g~~~~~  119 (120)
                      +++|++|||+|....            .+.+++|+.|++.++
T Consensus        81 g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  122 (258)
T PRK07890         81 GRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLT  122 (258)
T ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHH
Confidence            899999999997532            345778888877654

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2e-20  Score=129.80  Aligned_cols=111  Identities=23%  Similarity=0.420  Sum_probs=95.1

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      ++.+++|+++|||++++||.+++++|++.|++|++++|+.+.+....+++...+.++.++.+|+++++++.++++++.+.
T Consensus         4 ~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   83 (264)
T PRK07576          4 MFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADE   83 (264)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999987777666667666667788999999999999999999998


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      + +++|++|||+|....           .+.+++|+.|+++++
T Consensus        84 ~-~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~  125 (264)
T PRK07576         84 F-GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVL  125 (264)
T ss_pred             c-CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHH
Confidence            8 899999999986432           345678888887765

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2.8e-20  Score=127.88  Aligned_cols=110  Identities=30%  Similarity=0.370  Sum_probs=96.6

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++++|+++|||++++||.+++++|+++|++|++++|+...++...+++...+.++..+.+|+++.++++++++++.+.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH   83 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999999888888888887777788899999999999999999999999


Q ss_pred             CCcccEEEecCCCCC------------ccceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPY------------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~------------~~~~~~~n~~g~~~~~  119 (120)
                       +++|++|||+|...            +...+++|+.+++.++
T Consensus        84 -~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  125 (252)
T PRK07035         84 -GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMS  125 (252)
T ss_pred             -CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHH
Confidence             89999999999642            1356788888887664

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.83  E-value=2.2e-20  Score=129.57  Aligned_cols=108  Identities=16%  Similarity=0.206  Sum_probs=86.1

Q ss_pred             ccCcEEEEecC--CCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           11 LKGMTALVTGG--TKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        11 ~~~~~~litGa--~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++|+++||||  ++|||++++++|+++|++|++++|.. ..++..+++....+....+.+|++|+++++++++++.+++
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW   82 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh
Confidence            67999999997  67999999999999999999988763 3333444444332345678999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc----------------cceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPYS----------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~~----------------~~~~~~n~~g~~~~~~  120 (120)
                       |++|+||||||+...                ++.+++|+.+++.++|
T Consensus        83 -g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~  129 (261)
T PRK08690         83 -DGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAK  129 (261)
T ss_pred             -CCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHH
Confidence             899999999998631                2346788888877653

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.83  E-value=3.1e-20  Score=128.01  Aligned_cols=109  Identities=24%  Similarity=0.309  Sum_probs=91.7

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++++|+++|||++++||.+++++|++.|++|+++++...  ++..+++...+.++..+.+|++|++++.++++++.+.+
T Consensus         6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (253)
T PRK08993          6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEF   83 (253)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999998877543  23344455556678899999999999999999999999


Q ss_pred             CCcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                       +++|++|||||+..           +.+.+++|+.+++.+++
T Consensus        84 -~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  125 (253)
T PRK08993         84 -GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQ  125 (253)
T ss_pred             -CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence             89999999999864           24668899999887653

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.83  E-value=2.7e-20  Score=128.09  Aligned_cols=107  Identities=21%  Similarity=0.325  Sum_probs=93.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      +|+++|||+++|||.+++++|+++|++|++++|+...+++..+.+...+..+.++.+|++++++++++++++.+.+ +++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   79 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKF-GRI   79 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CCc
Confidence            5899999999999999999999999999999999877777777776666788899999999999999999999999 899


Q ss_pred             cEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           93 NILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        93 d~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                      |++|||+|...           |.+.+++|+.|+++++|
T Consensus        80 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  118 (252)
T PRK07677         80 DALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQ  118 (252)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHH
Confidence            99999998643           24568999999888754

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.83  E-value=3.2e-20  Score=127.22  Aligned_cols=110  Identities=23%  Similarity=0.246  Sum_probs=94.0

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +.+++|+++|||++++||.+++++|+++|++|++++|+....+...+++...+..+..+.+|+++++++.++++++.+.+
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (250)
T PRK07774          2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAF   81 (250)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            34678999999999999999999999999999999999877666666666556677889999999999999999999998


Q ss_pred             CCcccEEEecCCCCC--------------ccceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPY--------------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~--------------~~~~~~~n~~g~~~~~  119 (120)
                       +++|+||||+|+..              +.+.+++|+.++++++
T Consensus        82 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  125 (250)
T PRK07774         82 -GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCT  125 (250)
T ss_pred             -CCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHH
Confidence             89999999999853              1345788988887764

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.83  E-value=4.7e-20  Score=127.74  Aligned_cols=109  Identities=24%  Similarity=0.325  Sum_probs=94.8

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+++++++|||++++||.+++++|+++|++|++++|+.+.+++..+.+...+.++.++.+|+++++++.++++++.+.+ 
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   85 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF-   85 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            4789999999999999999999999999999999999887777777776666778899999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +++|+||||||....           ...+.+|+.+++.++
T Consensus        86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  126 (263)
T PRK07814         86 GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALT  126 (263)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHH
Confidence            899999999997442           345678888777654

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.83  E-value=3.1e-20  Score=129.63  Aligned_cols=108  Identities=17%  Similarity=0.277  Sum_probs=86.2

Q ss_pred             ccCcEEEEecCC--CchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           11 LKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        11 ~~~~~~litGa~--~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++|+++|||++  +|||++++++|+++|++|++++|+.. ..+..+++...-+....+.+|++++++++++++++.+++
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   86 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW   86 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence            578999999997  89999999999999999999988632 222233332221235578999999999999999999999


Q ss_pred             CCcccEEEecCCCCC---------------ccceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPY---------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~---------------~~~~~~~n~~g~~~~~~  120 (120)
                       |++|+||||||+..               +.+.+++|+.|++.++|
T Consensus        87 -g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~  132 (272)
T PRK08159         87 -GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQ  132 (272)
T ss_pred             -CCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHH
Confidence             89999999999853               24568899999887753

>PRK09242 tropinone reductase; Provisional

Probab=99.83  E-value=4.9e-20  Score=127.06  Aligned_cols=111  Identities=31%  Similarity=0.437  Sum_probs=96.7

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCHHHHHHHHHHHH
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      ++.+++|+++|||++++||.+++++|+++|++|++++|+.+.+++..+++...  +.++..+.+|+++++++.++++++.
T Consensus         4 ~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (257)
T PRK09242          4 RWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVE   83 (257)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999988887777777655  5688999999999999999999999


Q ss_pred             hhcCCcccEEEecCCCCC-----------ccceeeeeccceeccc
Q 033396           86 SQFDGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~  119 (120)
                      +.+ +++|++|||+|...           +.+.+.+|+.+++.++
T Consensus        84 ~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  127 (257)
T PRK09242         84 DHW-DGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELS  127 (257)
T ss_pred             HHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHH
Confidence            999 89999999999843           2456788888887764

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.83  E-value=3.2e-20  Score=128.67  Aligned_cols=107  Identities=16%  Similarity=0.266  Sum_probs=86.4

Q ss_pred             ccCcEEEEecCCC--chHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc-CCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           11 LKGMTALVTGGTK--GIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        11 ~~~~~~litGa~~--~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +++|+++||||++  |||++++++|+++|++|++.+|+. ..++..+++... +. ...+.+|++|+++++++++++.++
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~-~~~~~~Dv~~~~~v~~~~~~~~~~   83 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGC-NFVSELDVTNPKSISNLFDDIKEK   83 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCC-ceEEEccCCCHHHHHHHHHHHHHH
Confidence            5789999999997  899999999999999999998874 333344444433 33 346789999999999999999999


Q ss_pred             cCCcccEEEecCCCCC---------------ccceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPY---------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~---------------~~~~~~~n~~g~~~~~~  120 (120)
                      + |++|+||||+|+..               |.+.+++|+.+++.++|
T Consensus        84 ~-g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~  130 (260)
T PRK06603         84 W-GSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSR  130 (260)
T ss_pred             c-CCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHH
Confidence            9 89999999999742               24567889988887653

>PRK08643 acetoin reductase; Validated

Probab=99.83  E-value=4.7e-20  Score=126.98  Aligned_cols=106  Identities=25%  Similarity=0.347  Sum_probs=92.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      +|+++|||++++||.+++++|+++|++|++++|+.+..++...++...+.++.++.+|+++++++.++++++.+++ +++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i   80 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTF-GDL   80 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-CCC
Confidence            6899999999999999999999999999999999888777777777667788899999999999999999999999 899


Q ss_pred             cEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           93 NILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        93 d~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      |++|||+|+...           ++.+++|+.+++.++
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  118 (256)
T PRK08643         81 NVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGI  118 (256)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHH
Confidence            999999998642           345778888876543

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.83  E-value=4.3e-20  Score=127.90  Aligned_cols=108  Identities=17%  Similarity=0.194  Sum_probs=87.2

Q ss_pred             ccccCcEEEEecCC--CchHHHHHHHHHHCCCEEEEeeCCh---HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHH
Q 033396            9 WSLKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNE---TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMET   83 (120)
Q Consensus         9 ~~~~~~~~litGa~--~~ig~~~a~~l~~~g~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   83 (120)
                      +.+++|+++|||++  +|||++++++|+++|++|++++|+.   +.+++..+++.  +.++..+.+|++|++++++++++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~   80 (257)
T PRK08594          3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQESLLLPCDVTSDEEITACFET   80 (257)
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CCceEEEecCCCCHHHHHHHHHH
Confidence            45789999999997  8999999999999999999998753   33444444332  46788899999999999999999


Q ss_pred             HHhhcCCcccEEEecCCCCC---------------ccceeeeeccceeccc
Q 033396           84 VSSQFDGKLNILVSSAQLPY---------------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        84 ~~~~~~g~id~li~~ag~~~---------------~~~~~~~n~~g~~~~~  119 (120)
                      +.+.+ |++|++|||+|+..               +.+.+++|+.+++.++
T Consensus        81 ~~~~~-g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  130 (257)
T PRK08594         81 IKEEV-GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVA  130 (257)
T ss_pred             HHHhC-CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHH
Confidence            99999 89999999999753               1234677888877654

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.83  E-value=5.3e-20  Score=130.79  Aligned_cols=107  Identities=18%  Similarity=0.151  Sum_probs=92.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      +|+++|||+++|||++++++|+++| ++|++++|+.+..++..+++...+..+.++.+|+++.++++++++++.+.+ ++
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~~   81 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESG-RP   81 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhC-CC
Confidence            6799999999999999999999999 999999999887777777665455678889999999999999999998888 89


Q ss_pred             ccEEEecCCCCCc------------cceeeeeccceecccC
Q 033396           92 LNILVSSAQLPYS------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        92 id~li~~ag~~~~------------~~~~~~n~~g~~~~~~  120 (120)
                      +|++|||||+..+            ...+++|+.|++.++|
T Consensus        82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~  122 (314)
T TIGR01289        82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCN  122 (314)
T ss_pred             CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHH
Confidence            9999999998431            3458999999988753

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.82  E-value=6.8e-20  Score=125.59  Aligned_cols=108  Identities=26%  Similarity=0.347  Sum_probs=90.7

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++++|+++|||++++||.+++++|+++|++|++++|+..  .+..+.+...+.++..+.+|+++++++.++++++.+.+ 
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   78 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEF-   78 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            468999999999999999999999999999999998753  23444444556678899999999999999999999988 


Q ss_pred             CcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                      +++|++|||+|...           +++.+++|+.+++++++
T Consensus        79 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  120 (248)
T TIGR01832        79 GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQ  120 (248)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHH
Confidence            89999999999864           24557899988887653

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.82  E-value=8e-20  Score=125.92  Aligned_cols=109  Identities=29%  Similarity=0.402  Sum_probs=94.7

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+++|+++|||++++||.+++++|+++|++|++++|+++...+..+++...+.++.++.+|+++++++.++++++.+.+ 
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   82 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERF-   82 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            3678999999999999999999999999999999999888877777777667788899999999999999999998888 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +++|+||||+|....           ...+++|+.+++.++
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  123 (262)
T PRK13394         83 GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTT  123 (262)
T ss_pred             CCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHH
Confidence            899999999998642           344668888876643

>PRK06128 oxidoreductase; Provisional

Probab=99.82  E-value=4.6e-20  Score=130.19  Aligned_cols=109  Identities=27%  Similarity=0.276  Sum_probs=92.4

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChH--HHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET--ELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++|+++|||+++|||++++++|+++|++|+++.++..  ..++..+.++..+.++.++.+|++++++++++++++.+.+
T Consensus        53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  132 (300)
T PRK06128         53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL  132 (300)
T ss_pred             cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence            67899999999999999999999999999998877542  3455566666667788999999999999999999999999


Q ss_pred             CCcccEEEecCCCCC------------ccceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPY------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~------------~~~~~~~n~~g~~~~~~  120 (120)
                       +++|+||||||+..            +.+.+++|+.|+++++|
T Consensus       133 -g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  175 (300)
T PRK06128        133 -GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCK  175 (300)
T ss_pred             -CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence             89999999999753            24568899999887653

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.82  E-value=9.4e-20  Score=125.61  Aligned_cols=111  Identities=25%  Similarity=0.323  Sum_probs=95.8

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +.+++|+++|||++++||.+++++|+++|++|++++|+....+...+++...+.++.++.+|+++++++.+++..+.+.+
T Consensus         7 ~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   86 (255)
T PRK06113          7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKL   86 (255)
T ss_pred             cCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            34789999999999999999999999999999999998877777777776667788899999999999999999999988


Q ss_pred             CCcccEEEecCCCCCc----------cceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPYS----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~~----------~~~~~~n~~g~~~~~~  120 (120)
                       +++|++|||+|...+          +..+++|+.|++++++
T Consensus        87 -~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  127 (255)
T PRK06113         87 -GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQ  127 (255)
T ss_pred             -CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHH
Confidence             899999999997542          3447889888887653

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.82  E-value=6.7e-20  Score=126.35  Aligned_cols=109  Identities=26%  Similarity=0.259  Sum_probs=93.3

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++++|+++||||+++||++++++|+++|++|++++|+++.. +..+++...+.++.++.+|+++++++.++++++.+.+
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF   81 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            458899999999999999999999999999999999987666 5666776667788999999999999999999999998


Q ss_pred             CCcccEEEecCCCCCc----------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~----------~~~~~~n~~g~~~~~  119 (120)
                       +++|++|||+|...+          ...+++|+.+++.++
T Consensus        82 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  121 (258)
T PRK08628         82 -GRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMA  121 (258)
T ss_pred             -CCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHH
Confidence             899999999997542          344677887776654

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.82  E-value=2.4e-20  Score=129.07  Aligned_cols=107  Identities=17%  Similarity=0.106  Sum_probs=87.6

Q ss_pred             cccCcEEEEecC--CCchHHHHHHHHHHCCCEEEEeeCCh--HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHH
Q 033396           10 SLKGMTALVTGG--TKGIGYAVVEELAAFGAIVHTCSRNE--TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus        10 ~~~~~~~litGa--~~~ig~~~a~~l~~~g~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      .+++|+++|||+  ++|||.+++++|+++|++|++++|+.  +..++..+++   +..+.++.+|++|+++++++++++.
T Consensus         4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~~~~~   80 (256)
T PRK07889          4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL---PEPAPVLELDVTNEEHLASLADRVR   80 (256)
T ss_pred             cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc---CCCCcEEeCCCCCHHHHHHHHHHHH
Confidence            367899999999  89999999999999999999998764  2234443333   3357788999999999999999999


Q ss_pred             hhcCCcccEEEecCCCCCc---------------cceeeeeccceecccC
Q 033396           86 SQFDGKLNILVSSAQLPYS---------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~~---------------~~~~~~n~~g~~~~~~  120 (120)
                      +.+ |++|++|||||+...               .+.+++|+.|++.++|
T Consensus        81 ~~~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~  129 (256)
T PRK07889         81 EHV-DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAK  129 (256)
T ss_pred             HHc-CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            999 899999999998631               2457899999887653

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.82  E-value=4.3e-20  Score=128.40  Aligned_cols=105  Identities=28%  Similarity=0.380  Sum_probs=89.8

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+++++++||||++|||++++++|+++|++|++++|+++.+++...++.    .+.++.+|+++++++.++++++.+.+ 
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~-   76 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----LVVGGPLDVTDPASFAAFLDAVEADL-   76 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----cceEEEccCCCHHHHHHHHHHHHHHc-
Confidence            4678999999999999999999999999999999999877766655542    47788999999999999999999998 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +++|++|||+|+...           .+.+++|+.|++.++
T Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~  117 (273)
T PRK07825         77 GPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGS  117 (273)
T ss_pred             CCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHH
Confidence            899999999998653           345678888877654

>PRK06720 hypothetical protein; Provisional

Probab=99.82  E-value=6.6e-19  Score=115.46  Aligned_cols=95  Identities=23%  Similarity=0.297  Sum_probs=85.1

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +.+++|+++|||+++|||.++++.|++.|++|++++++.+..++..+++...+.....+.+|+++++++.++++++.+.+
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~   91 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAF   91 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999998877777767776656677889999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc
Q 033396           89 DGKLNILVSSAQLPYS  104 (120)
Q Consensus        89 ~g~id~li~~ag~~~~  104 (120)
                       |++|++|||||+..+
T Consensus        92 -G~iDilVnnAG~~~~  106 (169)
T PRK06720         92 -SRIDMLFQNAGLYKI  106 (169)
T ss_pred             -CCCCEEEECCCcCCC
Confidence             899999999998764

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.82  E-value=9.8e-20  Score=125.66  Aligned_cols=107  Identities=22%  Similarity=0.268  Sum_probs=89.8

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      +++|+++||||++|||.+++++|+++|++|++++|+. ...+..+++...+.++.++.+|+++++++.++++++.+.+ +
T Consensus         6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   83 (260)
T PRK12823          6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAF-G   83 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHc-C
Confidence            6789999999999999999999999999999999985 3445555665667788899999999999999999999998 8


Q ss_pred             cccEEEecCCCCCc------------cceeeeeccceeccc
Q 033396           91 KLNILVSSAQLPYS------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        91 ~id~li~~ag~~~~------------~~~~~~n~~g~~~~~  119 (120)
                      ++|+||||||...+            ...+++|+.+++.++
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  124 (260)
T PRK12823         84 RIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCC  124 (260)
T ss_pred             CCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHH
Confidence            99999999996431            344678888877654

>PRK06196 oxidoreductase; Provisional

Probab=99.82  E-value=4.7e-20  Score=130.93  Aligned_cols=105  Identities=24%  Similarity=0.289  Sum_probs=90.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.    .+.++.+|++|.++++++++++.+.+ 
T Consensus        23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~~~-   97 (315)
T PRK06196         23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID----GVEVVMLDLADLESVRAFAERFLDSG-   97 (315)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHhcC-
Confidence            4688999999999999999999999999999999999877766655553    26788999999999999999999888 


Q ss_pred             CcccEEEecCCCCC---------ccceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPY---------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~---------~~~~~~~n~~g~~~~~  119 (120)
                      +++|+||||||+..         ++..+++|+.|++.++
T Consensus        98 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~  136 (315)
T PRK06196         98 RRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALV  136 (315)
T ss_pred             CCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHH
Confidence            89999999999753         2455789999987765

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.82  E-value=7.4e-20  Score=126.58  Aligned_cols=109  Identities=21%  Similarity=0.343  Sum_probs=89.2

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhc-CCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSK-GLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      ..+++|+++||||++|||++++++|++.|++|+++++ +.+.++...+++... +.++.++.+|++|+++++++++++.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (260)
T PRK08416          4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDE   83 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999998865 555566666666543 66889999999999999999999999


Q ss_pred             hcCCcccEEEecCCCCC-----------------ccceeeeeccceecc
Q 033396           87 QFDGKLNILVSSAQLPY-----------------SQRKFFVKSRGPYGS  118 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~-----------------~~~~~~~n~~g~~~~  118 (120)
                      .+ +++|+||||||+..                 +...+++|+.+++.+
T Consensus        84 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  131 (260)
T PRK08416         84 DF-DRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVG  131 (260)
T ss_pred             hc-CCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHH
Confidence            99 89999999998642                 134466777776654

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.82  E-value=1.4e-19  Score=123.52  Aligned_cols=109  Identities=28%  Similarity=0.393  Sum_probs=94.4

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+++++++|||++++||.+++++|+++|++|++++|+....++..+++...+.++.++.+|+++++++.++++++.+.+ 
T Consensus         4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   82 (239)
T PRK07666          4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNEL-   82 (239)
T ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            3678999999999999999999999999999999999887777777776667788999999999999999999999988 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +++|++|||+|....           ++.+++|+.++++++
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  123 (239)
T PRK07666         83 GSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYAT  123 (239)
T ss_pred             CCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHH
Confidence            899999999998652           345688888877654

>PRK05855 short chain dehydrogenase; Validated

Probab=99.82  E-value=9.3e-20  Score=137.42  Aligned_cols=110  Identities=22%  Similarity=0.240  Sum_probs=98.0

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ..+.+++++||||++|||++++++|+++|++|++++|+...+++..+.+...+.++.++.+|++|++++.++++++.+.+
T Consensus       311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  390 (582)
T PRK05855        311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH  390 (582)
T ss_pred             ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            34678899999999999999999999999999999999888888888887777789999999999999999999999998


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                       |++|+||||||+...           ...+++|+.|+++++
T Consensus       391 -g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~  431 (582)
T PRK05855        391 -GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGC  431 (582)
T ss_pred             -CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHH
Confidence             899999999999653           455779999988765

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.7e-19  Score=123.73  Aligned_cols=108  Identities=25%  Similarity=0.321  Sum_probs=92.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+++|+++||||+++||.+++++|++.|++|++++|+.+...+..+++. .+.++..+.+|++|++++.++++++.+++ 
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~-   79 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARW-   79 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            4689999999999999999999999999999999999877666666555 46678999999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +++|+||||+|....           +..+.+|+.+++.++
T Consensus        80 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  120 (252)
T PRK06138         80 GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWA  120 (252)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHH
Confidence            899999999998652           334678888876553

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.81  E-value=3.4e-20  Score=131.32  Aligned_cols=112  Identities=22%  Similarity=0.230  Sum_probs=88.3

Q ss_pred             ccccccCcEEEEecC--CCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc----------C---CeEEEEeccC
Q 033396            7 KRWSLKGMTALVTGG--TKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK----------G---LQVSGNACDL   71 (120)
Q Consensus         7 ~~~~~~~~~~litGa--~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~----------~---~~~~~~~~D~   71 (120)
                      ..+++++|+++|||+  ++|||+++|+.|++.|++|++ .|..+.+++...++...          +   .....+.+|+
T Consensus         3 ~~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   81 (303)
T PLN02730          3 LPIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDA   81 (303)
T ss_pred             CCcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecce
Confidence            345689999999999  799999999999999999998 67766666665555321          1   1146788898


Q ss_pred             --CC------------------HHHHHHHHHHHHhhcCCcccEEEecCCCCC-------------ccceeeeeccceecc
Q 033396           72 --KI------------------RAQREKLMETVSSQFDGKLNILVSSAQLPY-------------SQRKFFVKSRGPYGS  118 (120)
Q Consensus        72 --~~------------------~~~~~~~~~~~~~~~~g~id~li~~ag~~~-------------~~~~~~~n~~g~~~~  118 (120)
                        ++                  +++++++++++.+.+ |++|+||||||+..             |.+.+++|+.+++.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~-G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l  160 (303)
T PLN02730         82 VFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADF-GSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSL  160 (303)
T ss_pred             ecCccccCchhhhcccccccCCHHHHHHHHHHHHHHc-CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHH
Confidence              33                  348999999999999 89999999997532             357789999999887


Q ss_pred             cC
Q 033396          119 IH  120 (120)
Q Consensus       119 ~~  120 (120)
                      +|
T Consensus       161 ~~  162 (303)
T PLN02730        161 LQ  162 (303)
T ss_pred             HH
Confidence            64

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.81  E-value=1.5e-19  Score=124.74  Aligned_cols=111  Identities=31%  Similarity=0.466  Sum_probs=95.9

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .+.+++|+++|||++++||.+++++|+++|++|++++|+.++++...+.+...+.++.++.+|++|+++++++++++.+.
T Consensus         7 ~~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~   86 (259)
T PRK08213          7 LFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLER   86 (259)
T ss_pred             hhCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999988777777777666778889999999999999999999998


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      + +++|++|||+|....           .+.+++|+.+++.++
T Consensus        87 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  128 (259)
T PRK08213         87 F-GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLS  128 (259)
T ss_pred             h-CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHH
Confidence            8 899999999997532           345678888887664

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.81  E-value=1.2e-19  Score=121.89  Aligned_cols=109  Identities=28%  Similarity=0.391  Sum_probs=93.7

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      +++.||.+++||+.+|||++++++|++.|..+.+.+.+.+.. +...+++..  ...+.+++||+++..++++.++++..
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~-~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~   79 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENP-EAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA   79 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCH-HHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence            457899999999999999999999999998877776665553 344556553  57899999999999999999999999


Q ss_pred             hcCCcccEEEecCCCCC---ccceeeeeccceeccc
Q 033396           87 QFDGKLNILVSSAQLPY---SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~---~~~~~~~n~~g~~~~~  119 (120)
                      .+ |.+|++||+||+..   |++.+.+|++|..+.+
T Consensus        80 ~f-g~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T  114 (261)
T KOG4169|consen   80 TF-GTIDILINGAGILDDKDWERTINVNLTGVINGT  114 (261)
T ss_pred             Hh-CceEEEEcccccccchhHHHhhccchhhhhhhh
Confidence            99 99999999999988   4788999999987654

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.6e-19  Score=124.62  Aligned_cols=109  Identities=27%  Similarity=0.305  Sum_probs=91.4

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN-ETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +..+|+++|||++++||++++++|+++|++|+++.+. .+.......++...+.++.++.+|++|++++.++++++.+.+
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   85 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAAL   85 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3568899999999999999999999999999887664 455556666666667788899999999999999999999988


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                       +++|+||||+|....           ++.+++|+.|+++++
T Consensus        86 -~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  126 (258)
T PRK09134         86 -GPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLA  126 (258)
T ss_pred             -CCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHH
Confidence             899999999998542           455788988888765

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.81  E-value=6.2e-19  Score=120.81  Aligned_cols=108  Identities=30%  Similarity=0.350  Sum_probs=92.1

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChH-HHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET-ELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      +++|+++|||++++||++++++|+++|++|++++|+.. ..+....++...+.++.++.+|+++++++.++++++.+.+ 
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   82 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEF-   82 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC-
Confidence            56899999999999999999999999999999988753 4555556666556678899999999999999999999888 


Q ss_pred             CcccEEEecCCCCC-----ccceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPY-----SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~-----~~~~~~~n~~g~~~~~  119 (120)
                      +++|++|||+|...     +...+++|+.|+++++
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~  117 (248)
T PRK07806         83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLA  117 (248)
T ss_pred             CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHH
Confidence            89999999998753     3567899999988765

>PRK06398 aldose dehydrogenase; Validated

Probab=99.81  E-value=5.5e-20  Score=127.24  Aligned_cols=99  Identities=31%  Similarity=0.382  Sum_probs=85.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++++|+++|||+++|||++++++|+++|++|++++|+....           ..+.++.+|++++++++++++++.+.+ 
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-----------~~~~~~~~D~~~~~~i~~~~~~~~~~~-   70 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-----------NDVDYFKVDVSNKEQVIKGIDYVISKY-   70 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-----------CceEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            46799999999999999999999999999999999876431           257789999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      +++|+||||||+...           .+.+++|+.|+++++|
T Consensus        71 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  112 (258)
T PRK06398         71 GRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSK  112 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            899999999998542           4557899999887753

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.81  E-value=2.9e-19  Score=122.51  Aligned_cols=108  Identities=19%  Similarity=0.318  Sum_probs=92.2

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEE-eeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHT-CSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      +.+++++|||++++||++++++|+++|++|++ ..|+.+..++..+++...+..+.++.+|+++++++.++++++.+.+ 
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   80 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEF-   80 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            45789999999999999999999999999876 5778777777777777777789999999999999999999999999 


Q ss_pred             CcccEEEecCCCCCcc-----------ceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYSQ-----------RKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~~-----------~~~~~n~~g~~~~~  119 (120)
                      +++|+||||+|.....           ..+++|+.+++.++
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  121 (250)
T PRK08063         81 GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCA  121 (250)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHH
Confidence            8999999999976532           24668888877664

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.5e-19  Score=124.78  Aligned_cols=105  Identities=18%  Similarity=0.241  Sum_probs=89.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      +++++|||++++||.+++++|++.|++|++++|+.+.+++..+++...+ ++.++.+|+++++++.++++++.+++ +++
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~-g~i   79 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAH-GLP   79 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhC-CCC
Confidence            4689999999999999999999999999999999877766666554334 78899999999999999999999988 899


Q ss_pred             cEEEecCCCCCc------------cceeeeeccceeccc
Q 033396           93 NILVSSAQLPYS------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        93 d~li~~ag~~~~------------~~~~~~n~~g~~~~~  119 (120)
                      |++|||+|....            +..+++|+.|++.++
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~  118 (257)
T PRK07024         80 DVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATF  118 (257)
T ss_pred             CEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHH
Confidence            999999997542            245778888887654

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2.4e-19  Score=122.71  Aligned_cols=109  Identities=28%  Similarity=0.374  Sum_probs=94.2

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+++|+++|||++++||.+++++|+++|++|++++|+++..+...+++...+.++.++.+|+++++++.++++++.+.+ 
T Consensus         4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   82 (250)
T PRK12939          4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAAL-   82 (250)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            3678999999999999999999999999999999999887777777776667788999999999999999999999998 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +++|++|||+|....           ...+.+|+.+++.++
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  123 (250)
T PRK12939         83 GGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLML  123 (250)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHH
Confidence            899999999998653           334567888776654

>PRK07985 oxidoreductase; Provisional

Probab=99.81  E-value=2.1e-19  Score=126.63  Aligned_cols=109  Identities=24%  Similarity=0.197  Sum_probs=91.5

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh--HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE--TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++|+++|||+++|||.+++++|+++|++|++.+++.  ...+++.+.+...+.++.++.+|+++++++.++++++.+.+
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  126 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL  126 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            7889999999999999999999999999999987653  33445555555557778899999999999999999999999


Q ss_pred             CCcccEEEecCCCCC------------ccceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPY------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~------------~~~~~~~n~~g~~~~~~  120 (120)
                       +++|++|||+|...            +.+.+++|+.|++.+++
T Consensus       127 -g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  169 (294)
T PRK07985        127 -GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQ  169 (294)
T ss_pred             -CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence             89999999999742            25668999999887753

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.81  E-value=1.1e-19  Score=126.02  Aligned_cols=108  Identities=19%  Similarity=0.181  Sum_probs=83.8

Q ss_pred             ccCcEEEEecC--CCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           11 LKGMTALVTGG--TKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        11 ~~~~~~litGa--~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++|+++||||  ++|||++++++|+++|++|+++++.... ++..+++....+....+.+|++|+++++++++++.+++
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   82 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHW   82 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHH-HHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHh
Confidence            57899999996  6899999999999999999998764221 12222232221223568899999999999999999999


Q ss_pred             CCcccEEEecCCCCC----------------ccceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPY----------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~----------------~~~~~~~n~~g~~~~~~  120 (120)
                       |++|++|||||+..                |+..+++|+.|++.++|
T Consensus        83 -g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~  129 (260)
T PRK06997         83 -DGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAK  129 (260)
T ss_pred             -CCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHH
Confidence             89999999999853                13457899999887754

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.81  E-value=3.7e-19  Score=122.26  Aligned_cols=108  Identities=26%  Similarity=0.345  Sum_probs=94.2

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      +++|+++|||++++||.+++++|+++|++|++++|++...+....++...+.++..+.+|+++++++.++++++.+.+ +
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~   80 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETF-G   80 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            567999999999999999999999999999999999888777777777677789999999999999999999999998 8


Q ss_pred             cccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           91 KLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        91 ~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      ++|++|||+|....           ...+++|+.+++.++
T Consensus        81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  120 (258)
T PRK12429         81 GVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTT  120 (258)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHH
Confidence            99999999997653           234678888876654

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.81  E-value=2.5e-19  Score=123.49  Aligned_cols=108  Identities=27%  Similarity=0.352  Sum_probs=91.7

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      |.+.+|+++|||++++||.+++++|+++|++|++++|+....++..+++   +.++..+.+|+++++++.++++++.+.+
T Consensus         2 ~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (257)
T PRK07067          2 MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI---GPAAIAVSLDVTRQDSIDRIVAAAVERF   78 (257)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3477899999999999999999999999999999999987766555544   4468889999999999999999999998


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                       +++|++|||+|....           +..+++|+.++++++|
T Consensus        79 -~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  120 (257)
T PRK07067         79 -GGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQ  120 (257)
T ss_pred             -CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHH
Confidence             899999999998642           4557889988877653

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.81  E-value=4.1e-19  Score=121.61  Aligned_cols=108  Identities=31%  Similarity=0.411  Sum_probs=92.5

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++++++++||||+++||.+++++|+++|++|++++|++...++....+.. +.++.++.+|++++++++++++++.+.+ 
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   79 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERF-   79 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHh-
Confidence            46789999999999999999999999999999999998777666666644 5678899999999999999999998888 


Q ss_pred             CcccEEEecCCCCCc------------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~------------~~~~~~n~~g~~~~~  119 (120)
                      +++|++|||+|....            +..+++|+.|++.++
T Consensus        80 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  121 (251)
T PRK07231         80 GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWT  121 (251)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHH
Confidence            899999999998542            345778888876654

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.3e-19  Score=124.73  Aligned_cols=102  Identities=28%  Similarity=0.415  Sum_probs=87.2

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++++|+++||||+++||++++++|+++|++|++++|+...        ...+..+.++.+|+++++++.++++++.+.+
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   73 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TVDGRPAEFHAADVRDPDQVAALVDAIVERH   73 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------hhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999998654        1234567889999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                       +++|+||||+|+...           ++.+++|+.+++.++
T Consensus        74 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  114 (252)
T PRK07856         74 -GRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVA  114 (252)
T ss_pred             -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHH
Confidence             899999999997542           355788888887765

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.81  E-value=3.5e-19  Score=121.68  Aligned_cols=107  Identities=22%  Similarity=0.303  Sum_probs=93.1

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      +.|+++|||++++||+.++++|+++|++|++++|++...++..+.+...+.++.++.+|+++++++.++++++.+++ ++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   83 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQF-GC   83 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence            45799999999999999999999999999999999887777777776667788899999999999999999999998 89


Q ss_pred             ccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           92 LNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        92 id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +|++|||+|...+           ++.+.+|+.++++++
T Consensus        84 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  122 (241)
T PRK07454         84 PDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCC  122 (241)
T ss_pred             CCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHH
Confidence            9999999998542           445778888877654

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.81  E-value=2.9e-19  Score=123.55  Aligned_cols=109  Identities=22%  Similarity=0.370  Sum_probs=92.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .+++|+++||||+++||.+++++|+++|++|+++.|+. +..+...+++...+.++.++.+|+++++++.++++++.+.+
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~   83 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF   83 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            47899999999999999999999999999999988854 44556666676667788899999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                       +++|++|||+|....           .+.+++|+.+++.++
T Consensus        84 -g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~  124 (261)
T PRK08936         84 -GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGS  124 (261)
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHH
Confidence             899999999998542           345788888877543

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2.4e-19  Score=123.90  Aligned_cols=108  Identities=21%  Similarity=0.316  Sum_probs=90.4

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+++|+++|||++++||++++++|+++|++|++++|+.. ..+..+++...+.++.++.+|++++++++++++++.+.+ 
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-   80 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE-   80 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            367899999999999999999999999999999999864 334444554456678899999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +++|++|||+|+...           ++.+++|+.+++.++
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  121 (263)
T PRK08226         81 GRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVT  121 (263)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHH
Confidence            899999999998542           345778888887654

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.81  E-value=4.4e-19  Score=122.11  Aligned_cols=110  Identities=25%  Similarity=0.297  Sum_probs=95.5

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ..+.+|+++|||++++||++++++|+++|++|++++|+.+.+++...++...+.++.++.+|+++++++.++++++.+.+
T Consensus         5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (258)
T PRK06949          5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEA   84 (258)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            34788999999999999999999999999999999999888877777776666778899999999999999999998888


Q ss_pred             CCcccEEEecCCCCC-----------ccceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~  119 (120)
                       +++|++|||+|...           +...+++|+.+++.++
T Consensus        85 -~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  125 (258)
T PRK06949         85 -GTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVA  125 (258)
T ss_pred             -CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHH
Confidence             89999999999754           2345788888877654

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.8e-19  Score=125.84  Aligned_cols=104  Identities=23%  Similarity=0.298  Sum_probs=89.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      +|+++|||+ +|||++++++|+ +|++|++++|+...+++..+++...+.++.++.+|++|++++.++++++ +.+ +++
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~-g~i   77 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTL-GPV   77 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-Hhc-CCC
Confidence            578999998 699999999997 7999999999987777777777666778889999999999999999988 567 899


Q ss_pred             cEEEecCCCCC----ccceeeeeccceecccC
Q 033396           93 NILVSSAQLPY----SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        93 d~li~~ag~~~----~~~~~~~n~~g~~~~~~  120 (120)
                      |+||||||+..    +.+.+++|+.|++++++
T Consensus        78 d~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~  109 (275)
T PRK06940         78 TGLVHTAGVSPSQASPEAILKVDLYGTALVLE  109 (275)
T ss_pred             CEEEECCCcCCchhhHHHHHHHhhHHHHHHHH
Confidence            99999999864    46778999999987753

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.81  E-value=2.5e-19  Score=122.66  Aligned_cols=108  Identities=18%  Similarity=0.253  Sum_probs=90.7

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      +++|+++|||++++||++++++|+++|++|++. +++....++..+++...+.++..+.+|++|++++.++++++.+.+ 
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   79 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEV-   79 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh-
Confidence            368999999999999999999999999998875 445555555666666667788899999999999999999999998 


Q ss_pred             CcccEEEecCCCCC-----------ccceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~  119 (120)
                      +++|+||||+|...           +.+.+++|+.+++.++
T Consensus        80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  120 (246)
T PRK12938         80 GEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVT  120 (246)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHH
Confidence            89999999999864           2456788888887754

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.80  E-value=2.5e-19  Score=123.79  Aligned_cols=102  Identities=28%  Similarity=0.346  Sum_probs=87.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   94 (120)
                      +++|||+++|||++++++|+++|++|++++|+++.+++..+++...+ .+.++.+|++|+++++++++++.+.+ +++|+
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~-g~id~   79 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-EVYAVKADLSDKDDLKNLVKEAWELL-GGIDA   79 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEcCCCCHHHHHHHHHHHHHhc-CCCCE
Confidence            69999999999999999999999999999999888877777776544 67889999999999999999999999 89999


Q ss_pred             EEecCCCCCc-------------cceeeeeccceecc
Q 033396           95 LVSSAQLPYS-------------QRKFFVKSRGPYGS  118 (120)
Q Consensus        95 li~~ag~~~~-------------~~~~~~n~~g~~~~  118 (120)
                      ||||+|....             .+.+.+|+.+++.+
T Consensus        80 li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  116 (259)
T PRK08340         80 LVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYL  116 (259)
T ss_pred             EEECCCCCCCCccccccccHHHHHHHHhhcchHHHHH
Confidence            9999997431             23356777776654

>PRK06484 short chain dehydrogenase; Validated

Probab=99.80  E-value=2.4e-19  Score=134.48  Aligned_cols=107  Identities=22%  Similarity=0.357  Sum_probs=92.8

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ...+|+++|||+++|||++++++|+++|++|++++|+...+++..+++   +.++..+.+|++|++++.++++++.+.+ 
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-  341 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL---GDEHLSVQADITDEAAVESAFAQIQARW-  341 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEccCCCHHHHHHHHHHHHHHc-
Confidence            357899999999999999999999999999999999987776665544   5567788999999999999999999999 


Q ss_pred             CcccEEEecCCCCC------------ccceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPY------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~------------~~~~~~~n~~g~~~~~~  120 (120)
                      |++|+||||||+..            +++.+++|+.|+++++|
T Consensus       342 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  384 (520)
T PRK06484        342 GRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACAR  384 (520)
T ss_pred             CCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHH
Confidence            89999999999863            24668999999988754

>PRK12743 oxidoreductase; Provisional

Probab=99.80  E-value=2.8e-19  Score=123.35  Aligned_cols=106  Identities=22%  Similarity=0.299  Sum_probs=91.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      +|+++||||+++||.+++++|+++|++|+++.+ +.+..+...+++...+.++.++.+|++++++++++++++.+.+ ++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~   80 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL-GR   80 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence            578999999999999999999999999988865 5555666677777778889999999999999999999999999 89


Q ss_pred             ccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           92 LNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        92 id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +|++|||+|....           ...+.+|+.+++.++
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  119 (256)
T PRK12743         81 IDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCS  119 (256)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHH
Confidence            9999999998552           355788888887765

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.80  E-value=2.7e-19  Score=122.45  Aligned_cols=106  Identities=31%  Similarity=0.432  Sum_probs=90.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+.+|+++||||+++||.+++++|+++|++|++++|+...+++..+++   +.++.++.+|+++++++.++++++.+.+ 
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   78 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GESALVIRADAGDVAAQKALAQALAEAF-   78 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh-
Confidence            356899999999999999999999999999999999876665554443   5678889999999999999999999988 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +++|++|||+|...+           ++.+++|+.++++++
T Consensus        79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  119 (249)
T PRK06500         79 GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLI  119 (249)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            899999999998542           356788888887765

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.80  E-value=3.3e-19  Score=122.59  Aligned_cols=110  Identities=29%  Similarity=0.398  Sum_probs=89.3

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEee-CChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHh---
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCS-RNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSS---   86 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~---   86 (120)
                      +++|+++|||+++|||.+++++|++.|++|++.. ++.+..++...++...+..+..+.+|+++.+++..+++++.+   
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            4689999999999999999999999999998875 555666666666766677788899999999999988887765   


Q ss_pred             -hcC-CcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           87 -QFD-GKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        87 -~~~-g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                       .++ +++|+||||||+..           +.+.+++|+.|++++++
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~  128 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQ  128 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHH
Confidence             331 38999999999754           24557799999987753

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.80  E-value=4.4e-19  Score=124.81  Aligned_cols=110  Identities=28%  Similarity=0.361  Sum_probs=93.1

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChH-HHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET-ELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      ..+++|+++|||++++||.+++++|+++|++|++++++.. ..+...+.+...+.++.++.+|+++.++++++++++.+.
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~  121 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE  121 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4578899999999999999999999999999999998753 345555556556778899999999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc------------cceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPYS------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~------------~~~~~~n~~g~~~~~  119 (120)
                      + +++|+||||||....            .+.+++|+.+++.++
T Consensus       122 ~-~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~  164 (290)
T PRK06701        122 L-GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMT  164 (290)
T ss_pred             c-CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHH
Confidence            8 899999999997532            345788998888765

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.80  E-value=4.5e-19  Score=122.69  Aligned_cols=107  Identities=27%  Similarity=0.335  Sum_probs=91.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+++++++||||+++||.+++++|+++|++|++++|+.+.+++...++ ..+.++.++.+|++|++++.++++.+.+ + 
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~-   78 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PYPGRHRWVVADLTSEAGREAVLARARE-M-   78 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHh-c-
Confidence            467899999999999999999999999999999999988777776666 4466888999999999999999988876 6 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +++|++|||+|....           ++.+++|+.|+++++
T Consensus        79 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~  119 (263)
T PRK09072         79 GGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLT  119 (263)
T ss_pred             CCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHH
Confidence            899999999998653           345678888877664

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.80  E-value=5.6e-19  Score=121.06  Aligned_cols=106  Identities=20%  Similarity=0.296  Sum_probs=90.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      +|+++|||+++|||++++++|+++|++|++++|+....++....+...  +.++.++.+|+++++++.++++++.+.+ +
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   80 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDEL-G   80 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            678999999999999999999999999999999988877776666543  5678999999999999999999999999 8


Q ss_pred             cccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           91 KLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        91 ~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      ++|++|||+|+...           .+.+++|+.+++.++
T Consensus        81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  120 (248)
T PRK08251         81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQC  120 (248)
T ss_pred             CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHH
Confidence            99999999998653           234677887776543

>PRK09186 flagellin modification protein A; Provisional

Probab=99.80  E-value=3.9e-19  Score=122.26  Aligned_cols=108  Identities=21%  Similarity=0.271  Sum_probs=89.8

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++|+++|||++++||++++++|+++|++|++++|+.+..++..+++...  +..+.++.+|++|++++.++++++.+.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            56899999999999999999999999999999999988877777776432  3345677999999999999999999999


Q ss_pred             CCcccEEEecCCCCC--------------ccceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPY--------------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~--------------~~~~~~~n~~g~~~~~  119 (120)
                       +++|++|||||...              +...+++|+.+++.++
T Consensus        82 -~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  125 (256)
T PRK09186         82 -GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFS  125 (256)
T ss_pred             -CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHH
Confidence             89999999997532              2345677888777654

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.80  E-value=4.7e-19  Score=122.19  Aligned_cols=107  Identities=23%  Similarity=0.274  Sum_probs=91.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc-C-CeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-G-LQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      +|+++|||++++||.+++++|+++|++|++++|+....+...+++... + .++.++.+|+++++++.++++++.+.+ +
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~   80 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIF-G   80 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            689999999999999999999999999999999887777666666543 2 578999999999999999999999999 8


Q ss_pred             cccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           91 KLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        91 ~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      ++|++|||+|....           .+.+++|+.|+++++|
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  121 (259)
T PRK12384         81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAR  121 (259)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHH
Confidence            99999999997652           4557889998877653

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.80  E-value=5.4e-19  Score=121.94  Aligned_cols=109  Identities=27%  Similarity=0.405  Sum_probs=89.2

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC----hHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN----ETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      +++|+++|||++++||.+++++|+++|++|+++.+.    .+..++..+++...+.++.++.+|+++++++.++++++.+
T Consensus         6 l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (257)
T PRK12744          6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA   85 (257)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence            678999999999999999999999999996666543    2334555555655566788999999999999999999999


Q ss_pred             hcCCcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           87 QFDGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                      .+ +++|++|||||...           +.+.+++|+.++++++|
T Consensus        86 ~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~  129 (257)
T PRK12744         86 AF-GRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIK  129 (257)
T ss_pred             hh-CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHH
Confidence            88 89999999999843           24567889999887653

>PRK05599 hypothetical protein; Provisional

Probab=99.80  E-value=2.6e-19  Score=123.19  Aligned_cols=103  Identities=17%  Similarity=0.189  Sum_probs=86.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCC-eEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL-QVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      ++++|||+++|||++++++|+ +|++|++++|+.+++++..+++++.+. .+.++.+|++|+++++++++++.+.+ |++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~i   78 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELA-GEI   78 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhc-CCC
Confidence            579999999999999999999 599999999999888888888876654 47889999999999999999999988 899


Q ss_pred             cEEEecCCCCCcc-----------ceeeeeccceecc
Q 033396           93 NILVSSAQLPYSQ-----------RKFFVKSRGPYGS  118 (120)
Q Consensus        93 d~li~~ag~~~~~-----------~~~~~n~~g~~~~  118 (120)
                      |++|||+|+....           +.+++|+.+++.+
T Consensus        79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  115 (246)
T PRK05599         79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSM  115 (246)
T ss_pred             CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHH
Confidence            9999999986531           2245666666543

>TIGR02415 23BDH acetoin reductases

Probab=99.80  E-value=6.2e-19  Score=121.10  Aligned_cols=105  Identities=26%  Similarity=0.371  Sum_probs=92.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      |+++|||++++||.+++++|++.|++|++++|+....++..+++...+.++.++.+|+++++++.++++++.+++ +++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-~~id   79 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKF-GGFD   79 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999877777777777777789999999999999999999999999 8999


Q ss_pred             EEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           94 ILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        94 ~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +||||+|....           ++.+++|+.+++.++
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  116 (254)
T TIGR02415        80 VMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGI  116 (254)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHH
Confidence            99999998542           355788888876543

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.79  E-value=8.2e-19  Score=119.85  Aligned_cols=109  Identities=25%  Similarity=0.386  Sum_probs=91.6

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ++++|+++|||++++||++++++|+++|++|+++.++. ....+..+++...+.++.++.+|+++++++.++++++.+.+
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF   81 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999999998887654 34555666666667789999999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                       +++|++|||+|+...           .+.+++|+.+++.++
T Consensus        82 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  122 (245)
T PRK12937         82 -GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVL  122 (245)
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHH
Confidence             899999999998642           345778888877654

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.79  E-value=4e-19  Score=122.47  Aligned_cols=105  Identities=31%  Similarity=0.463  Sum_probs=85.6

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++++|+++|||+++|||.+++++|++.|++|+++.+......   +++...  .+.++.+|++|++++.++++++.+.+
T Consensus         3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~---~~l~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~   77 (255)
T PRK06463          3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEA---KELREK--GVFTIKCDVGNRDQVKKSKEVVEKEF   77 (255)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHH---HHHHhC--CCeEEEecCCCHHHHHHHHHHHHHHc
Confidence            3468999999999999999999999999999998876543322   222222  36788999999999999999999999


Q ss_pred             CCcccEEEecCCCCC-----------ccceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~  119 (120)
                       +++|+||||+|+..           +.+.+++|+.|++.++
T Consensus        78 -~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  118 (255)
T PRK06463         78 -GRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTT  118 (255)
T ss_pred             -CCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHH
Confidence             89999999999854           2456789999987764

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.79  E-value=6.3e-19  Score=121.76  Aligned_cols=109  Identities=30%  Similarity=0.374  Sum_probs=90.0

Q ss_pred             cccCcEEEEecCC--CchHHHHHHHHHHCCCEEEEeeCC-----------hHHHHHHHHHHHhcCCeEEEEeccCCCHHH
Q 033396           10 SLKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRN-----------ETELNQRIQEWKSKGLQVSGNACDLKIRAQ   76 (120)
Q Consensus        10 ~~~~~~~litGa~--~~ig~~~a~~l~~~g~~v~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   76 (120)
                      .+++|+++||||+  +|||.+++++|+++|++|+++++.           .....+..+++...+.++.++.+|++++++
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~   82 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA   82 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            4789999999998  499999999999999999987532           223334455666667889999999999999


Q ss_pred             HHHHHHHHHhhcCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           77 REKLMETVSSQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        77 ~~~~~~~~~~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +.++++++.+.+ |++|++|||+|....           ++.+++|+.|++.++
T Consensus        83 i~~~~~~~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  135 (256)
T PRK12859         83 PKELLNKVTEQL-GYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLS  135 (256)
T ss_pred             HHHHHHHHHHHc-CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            999999999998 899999999998642           345788999888764

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.79  E-value=8.1e-19  Score=122.35  Aligned_cols=109  Identities=22%  Similarity=0.269  Sum_probs=92.7

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+.+|+++||||+++||++++++|+++|++|++++|+...+.+....+...+.++.++.+|+++++++.++++++.+.+ 
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   85 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEAL-   85 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhc-
Confidence            3677899999999999999999999999999999998777666666666667788899999999999999999998888 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +++|++|||+|....           ...+++|+.|+++++
T Consensus        86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  126 (274)
T PRK07775         86 GEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLA  126 (274)
T ss_pred             CCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHH
Confidence            899999999998653           233578888877654

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.79  E-value=7.7e-19  Score=120.30  Aligned_cols=108  Identities=30%  Similarity=0.427  Sum_probs=91.3

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      +++|+++|||++++||.+++++|+++|++|+++.+ ++...++..+++...+.++.++.+|+++++++.++++++.+.+ 
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   82 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHF-   82 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            56899999999999999999999999999987654 4555666667776667789999999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +++|++|||+|....           ...+++|+.+++.++
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  123 (247)
T PRK12935         83 GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTT  123 (247)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            899999999998553           344678888877654

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.79  E-value=6.8e-19  Score=122.29  Aligned_cols=105  Identities=17%  Similarity=0.259  Sum_probs=92.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      ++++||||+++||.+++++|+++|++|++++|+.+.+++...++...+.++.++.+|+++++++.++++++.+.+ +++|
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~-~~id   79 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKW-GGID   79 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            479999999999999999999999999999999888888888787777788999999999999999999999988 8999


Q ss_pred             EEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           94 ILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        94 ~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +||||+|....           ++.+++|+.+++.++
T Consensus        80 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  116 (270)
T PRK05650         80 VIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGC  116 (270)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHH
Confidence            99999998653           234678888877654

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.79  E-value=8e-19  Score=120.21  Aligned_cols=108  Identities=27%  Similarity=0.358  Sum_probs=93.4

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      +++|+++||||+++||.+++++|+++|++|++++|+.+..++..+.+...+.++.++.+|++++++++++++++.+.+ +
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~   79 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQAL-G   79 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            368899999999999999999999999999999999887777777776667789999999999999999999999998 8


Q ss_pred             cccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           91 KLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        91 ~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      ++|++|||+|....           ++.+++|+.++++++
T Consensus        80 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  119 (250)
T TIGR03206        80 PVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMH  119 (250)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            99999999997541           345778888877654

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.79  E-value=8.3e-19  Score=121.12  Aligned_cols=106  Identities=30%  Similarity=0.412  Sum_probs=89.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc-CCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .+++|+++|||++++||++++++|+++|++|++++|+.+.+++..+++... +.++..+.+|+++++++.+++++    +
T Consensus         4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----~   79 (259)
T PRK06125          4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----A   79 (259)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----h
Confidence            468999999999999999999999999999999999988877777777654 56788999999999998888764    4


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                       +++|++|||+|+..+           ++.+++|+.+++.++|
T Consensus        80 -g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  121 (259)
T PRK06125         80 -GDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTR  121 (259)
T ss_pred             -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence             789999999998542           4557889988887653

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.79  E-value=1e-18  Score=119.22  Aligned_cols=106  Identities=26%  Similarity=0.313  Sum_probs=90.0

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++++++++|||++++||++++++|+++|+.|++.+++.+.+++....+   +.++.++.+|++++++++++++++.+.+ 
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   78 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL---GERVKIFPANLSDRDEVKALGQKAEADL-   78 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            467899999999999999999999999999999998877766554443   4567889999999999999999999998 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +++|++|||+|...+           ++.+++|+.++++++
T Consensus        79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  119 (245)
T PRK12936         79 EGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLT  119 (245)
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHH
Confidence            899999999998542           455788888887664

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1e-18  Score=120.91  Aligned_cols=109  Identities=28%  Similarity=0.385  Sum_probs=92.4

Q ss_pred             cccCcEEEEecCCC-chHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh-cC-CeEEEEeccCCCHHHHHHHHHHHHh
Q 033396           10 SLKGMTALVTGGTK-GIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KG-LQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus        10 ~~~~~~~litGa~~-~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      .+++|+++|||+++ |||.++++.|+++|++|++++|+...+++..++++. .+ .++.++.+|++++++++++++++.+
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            36789999999985 899999999999999999999988777777776665 23 4688999999999999999999999


Q ss_pred             hcCCcccEEEecCCCCC-----------ccceeeeeccceeccc
Q 033396           87 QFDGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~  119 (120)
                      .+ |++|+||||+|...           +.+.+++|+.+++.++
T Consensus        94 ~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  136 (262)
T PRK07831         94 RL-GRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRAT  136 (262)
T ss_pred             Hc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHH
Confidence            88 89999999999754           2455678888877654

>PRK06484 short chain dehydrogenase; Validated

Probab=99.79  E-value=5.5e-19  Score=132.56  Aligned_cols=106  Identities=26%  Similarity=0.344  Sum_probs=91.8

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++   +.++..+.+|+++++++.++++++.+++ +
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   78 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---GPDHHALAMDVSDEAQIREGFEQLHREF-G   78 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEeccCCHHHHHHHHHHHHHHh-C
Confidence            46899999999999999999999999999999999987776665554   5567889999999999999999999999 8


Q ss_pred             cccEEEecCCCCC-------------ccceeeeeccceecccC
Q 033396           91 KLNILVSSAQLPY-------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        91 ~id~li~~ag~~~-------------~~~~~~~n~~g~~~~~~  120 (120)
                      ++|+||||+|+..             +.+.+++|+.+++.++|
T Consensus        79 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  121 (520)
T PRK06484         79 RIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAR  121 (520)
T ss_pred             CCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHH
Confidence            9999999999832             24568899999887653

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.79  E-value=8.9e-19  Score=120.79  Aligned_cols=109  Identities=27%  Similarity=0.306  Sum_probs=88.8

Q ss_pred             cccCcEEEEecCCC--chHHHHHHHHHHCCCEEEEeeCC-----------hHHHHHHHHHHHhcCCeEEEEeccCCCHHH
Q 033396           10 SLKGMTALVTGGTK--GIGYAVVEELAAFGAIVHTCSRN-----------ETELNQRIQEWKSKGLQVSGNACDLKIRAQ   76 (120)
Q Consensus        10 ~~~~~~~litGa~~--~ig~~~a~~l~~~g~~v~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   76 (120)
                      .+++|+++||||++  |||.+++++|+++|++|++++|+           ........+.+...+.++.++.+|++++++
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   81 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA   81 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            45789999999984  89999999999999999999887           222222444455556789999999999999


Q ss_pred             HHHHHHHHHhhcCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           77 REKLMETVSSQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        77 ~~~~~~~~~~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +.++++++.+.+ +++|++|||+|+...           +..+++|+.|+++++
T Consensus        82 ~~~~~~~~~~~~-g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  134 (256)
T PRK12748         82 PNRVFYAVSERL-GDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLS  134 (256)
T ss_pred             HHHHHHHHHHhC-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            999999999998 899999999998542           344778888887765

>PLN00015 protochlorophyllide reductase

Probab=99.79  E-value=3.9e-19  Score=126.01  Aligned_cols=103  Identities=17%  Similarity=0.155  Sum_probs=88.9

Q ss_pred             EEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccEE
Q 033396           17 LVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNIL   95 (120)
Q Consensus        17 litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~l   95 (120)
                      +||||++|||.+++++|+++| ++|++++|+.+..++...++...+..+.++.+|++++++++++++++.+.+ +++|+|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-~~iD~l   79 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSG-RPLDVL   79 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcC-CCCCEE
Confidence            589999999999999999999 999999999887777777665445678889999999999999999998887 899999


Q ss_pred             EecCCCCCc------------cceeeeeccceecccC
Q 033396           96 VSSAQLPYS------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        96 i~~ag~~~~------------~~~~~~n~~g~~~~~~  120 (120)
                      |||||+...            ++.+++|+.|++.++|
T Consensus        80 InnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  116 (308)
T PLN00015         80 VCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSR  116 (308)
T ss_pred             EECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHH
Confidence            999998531            3568999999988764

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.78  E-value=2.2e-18  Score=118.00  Aligned_cols=93  Identities=29%  Similarity=0.447  Sum_probs=84.1

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++++++++|||++++||..+++.|+++|++|++++|+...+++..+++...+.++..+.+|++++++++++++++.+.+ 
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   80 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDF-   80 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            3679999999999999999999999999999999999887777777777667788999999999999999999998888 


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                      +++|++|||+|...
T Consensus        81 ~~id~vi~~ag~~~   94 (253)
T PRK08217         81 GQLNGLINNAGILR   94 (253)
T ss_pred             CCCCEEEECCCccC
Confidence            89999999999744

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.78  E-value=1.6e-18  Score=118.56  Aligned_cols=109  Identities=28%  Similarity=0.338  Sum_probs=92.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++.+|+++||||++++|.+++++|+++|++|++++|+.....+..+.+...+..+.++.+|+++++++.++++++.+++ 
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   81 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDF-   81 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh-
Confidence            3568899999999999999999999999999999999877777777776667778999999999999999999999998 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +++|++|||+|....           ...+++|+.+++.++
T Consensus        82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  122 (251)
T PRK12826         82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLT  122 (251)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHH
Confidence            899999999988763           334566776665543

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.2e-18  Score=120.10  Aligned_cols=109  Identities=31%  Similarity=0.484  Sum_probs=93.6

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCE-EEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .+++|+++|||++++||..++++|+++|++ |++++|+..+.....+++...+..+.++.+|+++++++.++++.+.+.+
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF   82 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            367899999999999999999999999998 9999998877776666776667788899999999999999999999988


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                       +++|++|||+|....           +..+++|+.++++++
T Consensus        83 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  123 (260)
T PRK06198         83 -GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLM  123 (260)
T ss_pred             -CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHH
Confidence             899999999998652           345778888877654

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.4e-18  Score=119.02  Aligned_cols=106  Identities=25%  Similarity=0.301  Sum_probs=88.6

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      +|+++|||++++||.+++++|+++|++|++..+ ++...++..+.+...+..+.++.+|+++++++.++++++.+.+ ++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~   80 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDREL-GR   80 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHh-CC
Confidence            478999999999999999999999999888864 4445555666666666778899999999999999999999999 89


Q ss_pred             ccEEEecCCCCCc------------cceeeeeccceeccc
Q 033396           92 LNILVSSAQLPYS------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        92 id~li~~ag~~~~------------~~~~~~n~~g~~~~~  119 (120)
                      +|++|||+|....            ...+++|+.++++++
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  120 (248)
T PRK06123         81 LDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCA  120 (248)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            9999999998642            245788888887654

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.78  E-value=9.3e-19  Score=122.14  Aligned_cols=104  Identities=21%  Similarity=0.213  Sum_probs=87.9

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+++++||||+++||++++++|+++|++|++++|+.+.++.+.+.   .+.++..+.+|++|++++.++++++.+.+ ++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~~~-~~   78 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL---HPDRALARLLDVTDFDAIDAVVADAEATF-GP   78 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh---cCCCeeEEEccCCCHHHHHHHHHHHHHHh-CC
Confidence            468899999999999999999999999999999987765544332   24567888999999999999999999998 89


Q ss_pred             ccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           92 LNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        92 id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +|+||||+|....           ++.+++|+.|+++++
T Consensus        79 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~  117 (277)
T PRK06180         79 IDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMT  117 (277)
T ss_pred             CCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHH
Confidence            9999999998652           345788998887764

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.78  E-value=9.9e-19  Score=120.83  Aligned_cols=106  Identities=17%  Similarity=0.146  Sum_probs=89.6

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHH-HHHHHHHHHhcC-CeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETE-LNQRIQEWKSKG-LQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ++++++||||++|||++++++|+++| ++|++++|+++. +++..+++...+ .++.++.+|++|++++.++++++.+ +
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~   85 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G   85 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c
Confidence            57899999999999999999999985 999999998875 777777776654 3788999999999999999998876 5


Q ss_pred             CCcccEEEecCCCCCcc-----------ceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYSQ-----------RKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~~-----------~~~~~n~~g~~~~~  119 (120)
                       +++|++|||+|+....           +.+++|+.++++++
T Consensus        86 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~  126 (253)
T PRK07904         86 -GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVG  126 (253)
T ss_pred             -CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHH
Confidence             7999999999996531           24788999888754

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.78  E-value=3.1e-18  Score=119.60  Aligned_cols=105  Identities=29%  Similarity=0.268  Sum_probs=87.1

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc-CCeEEEEeccCCCHHHHHHHHHHHHhhc-C
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGNACDLKIRAQREKLMETVSSQF-D   89 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   89 (120)
                      -|++++||||++|||++.+++||++|.+|++++|+.++++.+.+++.+. +..+..+.+|.++.+..   .+++.+.+ +
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~---ye~i~~~l~~  124 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEV---YEKLLEKLAG  124 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchh---HHHHHHHhcC
Confidence            4589999999999999999999999999999999999999999999875 68899999999998762   33333332 1


Q ss_pred             CcccEEEecCCCCCc-------------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-------------~~~~~~n~~g~~~~~  119 (120)
                      .++-+||||+|..++             +.++.+|..++..++
T Consensus       125 ~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t  167 (312)
T KOG1014|consen  125 LDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLT  167 (312)
T ss_pred             CceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHH
Confidence            357789999999883             466889988876654

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.78  E-value=2e-18  Score=120.11  Aligned_cols=109  Identities=27%  Similarity=0.293  Sum_probs=92.0

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .+++|+++|||++++||.+++++|+++|++|++++|+.+..+...+++...  +.++.++.+|+++++++.++++++.+.
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999987776666666543  357888999999999999999999999


Q ss_pred             cCCcccEEEecCCCCC------------ccceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPY------------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~------------~~~~~~~n~~g~~~~~  119 (120)
                      + +++|++|||+|...            +...+++|+.+++.++
T Consensus        84 ~-~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  126 (276)
T PRK05875         84 H-GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVL  126 (276)
T ss_pred             c-CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHH
Confidence            8 89999999999642            1345677888877664

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.6e-18  Score=119.73  Aligned_cols=103  Identities=23%  Similarity=0.256  Sum_probs=87.7

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh-cCCcc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ-FDGKL   92 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~g~i   92 (120)
                      |+++||||+++||++++++|+++|++|++++|+.+.+++....+.  +.++.++.+|+++++++.++++.+.+. + +++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~-~~i   78 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATG-GRL   78 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcC-CCC
Confidence            689999999999999999999999999999999877766655443  567889999999999999999988776 5 899


Q ss_pred             cEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           93 NILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        93 d~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      |+||||||+...           +..+++|+.++++++
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  116 (260)
T PRK08267         79 DVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGA  116 (260)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHH
Confidence            999999998652           345788888887764

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.77  E-value=2.2e-18  Score=118.46  Aligned_cols=109  Identities=31%  Similarity=0.437  Sum_probs=89.4

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      +++++++|||++++||.+++++|+++|++|++. .|+..+.++..+.+...+..+.++.+|++|++++.++++++.+.++
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~   83 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ   83 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence            568999999999999999999999999998775 6777666666666665566788999999999999999999888762


Q ss_pred             -----CcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           90 -----GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 -----g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                           +++|++|||+|....           ...+++|+.|+++++
T Consensus        84 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  129 (254)
T PRK12746         84 IRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLI  129 (254)
T ss_pred             cccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence                 369999999998653           344568888877664

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.1e-18  Score=133.90  Aligned_cols=109  Identities=28%  Similarity=0.418  Sum_probs=96.0

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|++++.++++++.+.+ 
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-  446 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH-  446 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc-
Confidence            4678999999999999999999999999999999999888888888887777789999999999999999999999999 


Q ss_pred             CcccEEEecCCCCC-------------ccceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPY-------------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~-------------~~~~~~~n~~g~~~~~  119 (120)
                      |++|++|||||...             +.+.+++|+.|++.++
T Consensus       447 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  489 (657)
T PRK07201        447 GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLI  489 (657)
T ss_pred             CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHH
Confidence            89999999999752             1345678888877654

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.77  E-value=3.8e-18  Score=116.10  Aligned_cols=108  Identities=33%  Similarity=0.505  Sum_probs=92.2

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+.+++++||||+|+||.+++++|+++|++|++++|++....+..+++... ..+.++.+|+++++++.++++++.+.+ 
T Consensus         3 ~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~-   80 (237)
T PRK07326          3 SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAAF-   80 (237)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            356899999999999999999999999999999999987777776666544 568899999999999999999999988 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +++|++||++|...+           ...+++|+.+++.++
T Consensus        81 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  121 (237)
T PRK07326         81 GGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTI  121 (237)
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHH
Confidence            899999999997653           245778888877654

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.4e-18  Score=119.87  Aligned_cols=101  Identities=31%  Similarity=0.271  Sum_probs=85.8

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ..+++|+++|||+++|||.+++++|+++|++|++++|+....         ....+.++.+|++++++++++++++.+.+
T Consensus         5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (260)
T PRK06523          5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---------LPEGVEFVAADLTTAEGCAAVARAVLERL   75 (260)
T ss_pred             cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---------cCCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence            347899999999999999999999999999999999986431         13457789999999999999999999998


Q ss_pred             CCcccEEEecCCCCC-------------ccceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPY-------------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~-------------~~~~~~~n~~g~~~~~  119 (120)
                       +++|++|||+|...             +.+.+++|+.|++.++
T Consensus        76 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  118 (260)
T PRK06523         76 -GGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLD  118 (260)
T ss_pred             -CCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHH
Confidence             89999999999642             2456788998887664

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.77  E-value=3.2e-18  Score=116.56  Aligned_cols=109  Identities=34%  Similarity=0.434  Sum_probs=92.8

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++.+++++|||++++||..++++|+++|++|++++|++...+.....+...+.++.++.+|+++++++.++++++.+.+ 
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   80 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAF-   80 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHh-
Confidence            3567899999999999999999999999999999999887777777777677889999999999999999999998888 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +++|++||++|....           ...++.|+.++++++
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  121 (246)
T PRK05653         81 GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVV  121 (246)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHH
Confidence            899999999988653           234667777766543

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.77  E-value=2.9e-18  Score=117.92  Aligned_cols=106  Identities=28%  Similarity=0.435  Sum_probs=89.1

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .|+++|||++++||.+++++|+++|++|++++|.. +..++..+.++..+.++.++.+|+++++++.++++++.+.+ ++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   80 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAW-GR   80 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhc-CC
Confidence            47899999999999999999999999999999864 44555566666556778999999999999999999999998 89


Q ss_pred             ccEEEecCCCCCc-------------cceeeeeccceeccc
Q 033396           92 LNILVSSAQLPYS-------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        92 id~li~~ag~~~~-------------~~~~~~n~~g~~~~~  119 (120)
                      +|++|||+|...+             ++.+++|+.+++.++
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  121 (256)
T PRK12745         81 IDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLT  121 (256)
T ss_pred             CCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHH
Confidence            9999999998431             345788988887654

>PRK06182 short chain dehydrogenase; Validated

Probab=99.77  E-value=1.5e-18  Score=120.78  Aligned_cols=101  Identities=28%  Similarity=0.320  Sum_probs=85.0

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      ++|+++|||+++|||++++++|+++|++|++++|+.+.+.+..    ..  .+.++.+|++|++++.++++++.+.+ ++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~----~~--~~~~~~~Dv~~~~~~~~~~~~~~~~~-~~   74 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA----SL--GVHPLSLDVTDEASIKAAVDTIIAEE-GR   74 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----hC--CCeEEEeeCCCHHHHHHHHHHHHHhc-CC
Confidence            5789999999999999999999999999999999987654432    22  36788999999999999999999988 89


Q ss_pred             ccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           92 LNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        92 id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +|+||||+|+...           ...+++|+.|++.++
T Consensus        75 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  113 (273)
T PRK06182         75 IDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLT  113 (273)
T ss_pred             CCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHH
Confidence            9999999998653           355788888876554

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.77  E-value=2.2e-18  Score=120.09  Aligned_cols=104  Identities=23%  Similarity=0.259  Sum_probs=88.4

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+|+++||||+++||++++++|+++|++|++++|+...+++..+.+   +..+..+.+|+++++++.++++++.+.+ ++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   77 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY---GDRLLPLALDVTDRAAVFAAVETAVEHF-GR   77 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---cCCeeEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence            4689999999999999999999999999999999987765544332   4567888999999999999999999988 89


Q ss_pred             ccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           92 LNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        92 id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +|++|||+|....           ++.+++|+.+++.++
T Consensus        78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  116 (275)
T PRK08263         78 LDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVT  116 (275)
T ss_pred             CCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHH
Confidence            9999999998653           455788998887664

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.77  E-value=1.5e-18  Score=118.39  Aligned_cols=101  Identities=19%  Similarity=0.190  Sum_probs=84.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      +|+++|||+++|||++++++|+++|++|++++|++.+..   +.+...+  +.++.+|+++++++.++++++.+.+ +++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   75 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQAG--AQCIQADFSTNAGIMAFIDELKQHT-DGL   75 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHcC--CEEEEcCCCCHHHHHHHHHHHHhhC-CCc
Confidence            578999999999999999999999999999999875433   2232233  5678999999999999999999998 899


Q ss_pred             cEEEecCCCCC-----------ccceeeeeccceeccc
Q 033396           93 NILVSSAQLPY-----------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        93 d~li~~ag~~~-----------~~~~~~~n~~g~~~~~  119 (120)
                      |++|||+|...           +.+.+++|+.+++.++
T Consensus        76 d~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~  113 (236)
T PRK06483         76 RAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLN  113 (236)
T ss_pred             cEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHH
Confidence            99999999753           2456788999888664

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.77  E-value=2.4e-18  Score=119.76  Aligned_cols=105  Identities=24%  Similarity=0.306  Sum_probs=88.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCe-EEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ-VSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      |+++||||++|||.+++++|+++|++|++++|+.+.+++..+++...+.. +.++.+|+++++++.++++++.+.+ +++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   79 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAH-GSM   79 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhc-CCC
Confidence            47999999999999999999999999999999988777777777655443 4567899999999999999999988 899


Q ss_pred             cEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           93 NILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        93 d~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      |++|||+|...+           +..+++|+.|++.++
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  117 (272)
T PRK07832         80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVI  117 (272)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHH
Confidence            999999998653           345788888877664

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.76  E-value=1.8e-18  Score=119.83  Aligned_cols=100  Identities=25%  Similarity=0.376  Sum_probs=85.6

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+++|+++|||+++|||++++++|+++|++|++++++.....         ...+..+.+|+++++++.++++++.+.+ 
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   75 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ---------HENYQFVPTDVSSAEEVNHTVAEIIEKF-   75 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc---------cCceEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            478999999999999999999999999999999998765431         2357788999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc--------------------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS--------------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~--------------------~~~~~~n~~g~~~~~  119 (120)
                      +++|++|||||+...                    ++.+++|+.++++++
T Consensus        76 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  125 (266)
T PRK06171         76 GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMS  125 (266)
T ss_pred             CCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHH
Confidence            899999999997531                    345788998888765

>PRK09135 pteridine reductase; Provisional

Probab=99.76  E-value=4.9e-18  Score=116.07  Aligned_cols=109  Identities=24%  Similarity=0.280  Sum_probs=89.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhc-CCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWKSK-GLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .+.+++++|||++++||++++++|+++|++|++++|.. ...+.....+... +..+.++.+|+++++++.++++++.+.
T Consensus         3 ~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (249)
T PRK09135          3 TDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAA   82 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999864 4455555555443 346888999999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      + +++|++|||+|....           +..+++|+.|+++++
T Consensus        83 ~-~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~  124 (249)
T PRK09135         83 F-GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLS  124 (249)
T ss_pred             c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHH
Confidence            8 899999999997542           345678988887765

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.76  E-value=4.2e-18  Score=117.14  Aligned_cols=107  Identities=32%  Similarity=0.459  Sum_probs=88.5

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++++|+++||||+++||.+++++|+++|++|++++|+.... +...++  .+..+..+.+|+++++++.++++++.+.+
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   87 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQL--LGGNAKGLVCDVSDSQSVEAAVAAVISAF   87 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHh--hCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999999999986532 222333  23456789999999999999999999998


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                       +++|++|||+|....           .+.+++|+.|+++++
T Consensus        88 -~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  128 (255)
T PRK06841         88 -GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMA  128 (255)
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHH
Confidence             899999999998652           345788888887765

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.76  E-value=3.2e-18  Score=116.92  Aligned_cols=111  Identities=25%  Similarity=0.341  Sum_probs=91.5

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc-CCeEEEEeccCCC--HHHHHHHHHHHHh
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGNACDLKI--RAQREKLMETVSS   86 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~--~~~~~~~~~~~~~   86 (120)
                      .+++|+++|||++++||.+++++|+++|++|++++|+....++..+++... +..+..+.+|+++  .+++.++++++.+
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~   82 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE   82 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999988877777777554 3456788899976  5678889988888


Q ss_pred             hcCCcccEEEecCCCCCc------------cceeeeeccceecccC
Q 033396           87 QFDGKLNILVSSAQLPYS------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~~------------~~~~~~n~~g~~~~~~  120 (120)
                      .+++++|++|||+|....            .+.+++|+.|++++++
T Consensus        83 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~  128 (239)
T PRK08703         83 ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTR  128 (239)
T ss_pred             HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHH
Confidence            775689999999997531            2357899999887653

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.76  E-value=3.1e-18  Score=119.39  Aligned_cols=106  Identities=20%  Similarity=0.287  Sum_probs=88.8

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+|+++||||+++||.+++++|+++|++|++++|++...++..+++...  +.++.++.+|++|++++++ ++++.+.+ 
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~-   79 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI-   79 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc-
Confidence            5789999999999999999999999999999999987776666655543  3578899999999999999 99988888 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +++|++|||+|....           ++.+++|+.|++.++
T Consensus        80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  120 (280)
T PRK06914         80 GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVT  120 (280)
T ss_pred             CCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHH
Confidence            899999999998653           234667888776654

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.76  E-value=4.3e-18  Score=116.65  Aligned_cols=105  Identities=27%  Similarity=0.324  Sum_probs=88.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEee-CChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCS-RNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      |+++||||+++||..+++.|++.|++|+++. ++++.++...+++...+.++.++.+|+++++++.++++++.+.+ +++
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i   81 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAF-GRL   81 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhc-CCC
Confidence            6899999999999999999999999988764 56566666666676667789999999999999999999998888 899


Q ss_pred             cEEEecCCCCCc------------cceeeeeccceeccc
Q 033396           93 NILVSSAQLPYS------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        93 d~li~~ag~~~~------------~~~~~~n~~g~~~~~  119 (120)
                      |++|||+|....            ...+.+|+.+++.++
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  120 (248)
T PRK06947         82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCA  120 (248)
T ss_pred             CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHH
Confidence            999999997542            234788888887664

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.76  E-value=3.3e-18  Score=119.43  Aligned_cols=101  Identities=19%  Similarity=0.178  Sum_probs=84.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      +|+++||||++|||++++++|+++|++|++++|+++.++++.+    .  .+.++.+|++|+++++++++++.+.+++++
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~----~--~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~i   77 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA----E--GLEAFQLDYAEPESIAALVAQVLELSGGRL   77 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----C--CceEEEccCCCHHHHHHHHHHHHHHcCCCc
Confidence            6799999999999999999999999999999999776654332    2  366789999999999999999877765789


Q ss_pred             cEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           93 NILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        93 d~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      |++|||||+...           +..+++|+.|++.++
T Consensus        78 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~  115 (277)
T PRK05993         78 DALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLT  115 (277)
T ss_pred             cEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHH
Confidence            999999998653           345788988877654

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.76  E-value=1.3e-18  Score=120.71  Aligned_cols=99  Identities=28%  Similarity=0.290  Sum_probs=84.1

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      ++++++||||+++||++++++|+++|++|++++|+....+.        ...+.++.+|++|+++++++++++.+.+ ++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~~~~~-g~   73 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP--------IPGVELLELDVTDDASVQAAVDEVIARA-GR   73 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--------cCCCeeEEeecCCHHHHHHHHHHHHHhC-CC
Confidence            57899999999999999999999999999999998654321        2356788999999999999999999999 89


Q ss_pred             ccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           92 LNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        92 id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +|+||||+|+...           .+.+++|+.|++.++
T Consensus        74 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~  112 (270)
T PRK06179         74 IDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMT  112 (270)
T ss_pred             CCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHH
Confidence            9999999998653           355778888877654

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.76  E-value=6.1e-18  Score=117.40  Aligned_cols=106  Identities=24%  Similarity=0.275  Sum_probs=83.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhc-CCeEEEEeccCCCHHHH----HHHHHHHHhh
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSK-GLQVSGNACDLKIRAQR----EKLMETVSSQ   87 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~----~~~~~~~~~~   87 (120)
                      ++++||||++|||++++++|++.|++|+++.+ +++.+++..+++... +..+.++.+|++|++++    +++++++.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            57999999999999999999999999998765 455666666666543 45677899999999755    5666777777


Q ss_pred             cCCcccEEEecCCCCCc----------------------cceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPYS----------------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~----------------------~~~~~~n~~g~~~~~~  120 (120)
                      + +++|+||||||+..+                      .+.+++|+.+++.++|
T Consensus        82 ~-g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  135 (267)
T TIGR02685        82 F-GRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIK  135 (267)
T ss_pred             c-CCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHH
Confidence            8 899999999997542                      1347889888887753

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.76  E-value=5.9e-18  Score=115.54  Aligned_cols=109  Identities=32%  Similarity=0.400  Sum_probs=92.0

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .+.+|+++|||++++||.+++++|++.|++|+++ +|+........+.+...+.++.++.+|+++++++.++++++.+.+
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF   81 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            3567899999999999999999999999999998 998777766666666666778999999999999999999998888


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                       +++|++|||+|....           +..+.+|+.+++.++
T Consensus        82 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  122 (247)
T PRK05565         82 -GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLT  122 (247)
T ss_pred             -CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHH
Confidence             899999999998642           344667777766553

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.76  E-value=8.7e-18  Score=115.21  Aligned_cols=110  Identities=26%  Similarity=0.364  Sum_probs=89.7

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN-ETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +++++++++|||++++||++++++|+++|++|++..+. ..........+...+.++..+.+|+++++++.++++++.+.
T Consensus         2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (252)
T PRK06077          2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR   81 (252)
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH
Confidence            44678999999999999999999999999998877654 44455555566666677889999999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      + +++|++|||+|....           +..+++|+.+++.++
T Consensus        82 ~-~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  123 (252)
T PRK06077         82 Y-GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCS  123 (252)
T ss_pred             c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHH
Confidence            9 899999999997442           344678888776654

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.75  E-value=4.6e-18  Score=131.32  Aligned_cols=110  Identities=24%  Similarity=0.248  Sum_probs=92.5

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      ..+.+|+++|||+++|||++++++|+++|++|++++|+...++...+++...  ...+..+.+|+++++++.++++++.+
T Consensus       410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~  489 (676)
T TIGR02632       410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL  489 (676)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999987777666666542  24678899999999999999999999


Q ss_pred             hcCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           87 QFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      .+ |++|+||||||+...           ...+++|+.+++.++
T Consensus       490 ~~-g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~  532 (676)
T TIGR02632       490 AY-GGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVA  532 (676)
T ss_pred             hc-CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHH
Confidence            99 899999999998652           344677877776653

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.75  E-value=1.1e-17  Score=114.25  Aligned_cols=105  Identities=23%  Similarity=0.243  Sum_probs=88.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      |+++|||++++||.+++++|+++|++|++. .|+.....+...++...+..+..+.+|++|++++.++++++.+.+ +++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~-~~i   80 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHD-EPL   80 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhC-CCC
Confidence            589999999999999999999999998764 677666666666676667778899999999999999999999888 899


Q ss_pred             cEEEecCCCCCc------------cceeeeeccceeccc
Q 033396           93 NILVSSAQLPYS------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        93 d~li~~ag~~~~------------~~~~~~n~~g~~~~~  119 (120)
                      |++|||+|....            +..+++|+.+++.++
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  119 (247)
T PRK09730         81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCC  119 (247)
T ss_pred             CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHH
Confidence            999999998532            245788888876543

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.75  E-value=8.9e-18  Score=114.77  Aligned_cols=108  Identities=27%  Similarity=0.342  Sum_probs=89.2

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeC----ChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR----NETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      +.+++++|||++++||++++++|+++|++|+++++    +.+..++...++...+.++.++.+|+++++++.++++++.+
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE   83 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            56789999999999999999999999999998665    33445555566666677889999999999999999999998


Q ss_pred             hcCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           87 QFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      .+ +++|++|||+|....           .+.+++|+.+++.++
T Consensus        84 ~~-~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  126 (249)
T PRK12827         84 EF-GRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVT  126 (249)
T ss_pred             Hh-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHH
Confidence            88 899999999998662           344677888877654

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.75  E-value=5e-18  Score=117.08  Aligned_cols=108  Identities=31%  Similarity=0.491  Sum_probs=89.3

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +..+++++++|||++++||+.++++|+++|++|++++|++...++..+.....  ++..+.+|+++++++.++++++.+.
T Consensus         6 ~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~   83 (264)
T PRK12829          6 LKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA--KVTATVADVADPAQVERVFDTAVER   83 (264)
T ss_pred             hhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC--ceEEEEccCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999877666555444322  5788999999999999999999998


Q ss_pred             cCCcccEEEecCCCC-C-----------ccceeeeeccceecc
Q 033396           88 FDGKLNILVSSAQLP-Y-----------SQRKFFVKSRGPYGS  118 (120)
Q Consensus        88 ~~g~id~li~~ag~~-~-----------~~~~~~~n~~g~~~~  118 (120)
                      + +++|+|||++|.. .           +.+.+++|+.+++.+
T Consensus        84 ~-~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  125 (264)
T PRK12829         84 F-GGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYF  125 (264)
T ss_pred             h-CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHH
Confidence            8 8999999999987 2           134567777776654

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.75  E-value=3.7e-18  Score=121.76  Aligned_cols=108  Identities=22%  Similarity=0.273  Sum_probs=83.5

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ..|++++||||++|||++++++|+++|++|++++|+++.+++..+++...  +..+..+.+|+++  ++.+.++++.+.+
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~  128 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETI  128 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHh
Confidence            35899999999999999999999999999999999999888888887654  3578888999985  2233344444444


Q ss_pred             C-CcccEEEecCCCCCc-------------cceeeeeccceecccC
Q 033396           89 D-GKLNILVSSAQLPYS-------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~-g~id~li~~ag~~~~-------------~~~~~~n~~g~~~~~~  120 (120)
                      + .++|++|||||+...             ++.+++|+.|++.+++
T Consensus       129 ~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  174 (320)
T PLN02780        129 EGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQ  174 (320)
T ss_pred             cCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHH
Confidence            1 256799999998531             3467889999887653

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.75  E-value=5.4e-18  Score=116.84  Aligned_cols=103  Identities=27%  Similarity=0.293  Sum_probs=85.9

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      +++|+++||||+++||.+++++|+++|++|++++|+....++..+++   +.  .++.+|++++++++++++++.+.+ +
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~---~~--~~~~~D~~~~~~~~~~~~~~~~~~-~   78 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV---GG--LFVPTDVTDEDAVNALFDTAAETY-G   78 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CC--cEEEeeCCCHHHHHHHHHHHHHHc-C
Confidence            67899999999999999999999999999999999877665554443   21  477899999999999999998888 8


Q ss_pred             cccEEEecCCCCCc-------------cceeeeeccceeccc
Q 033396           91 KLNILVSSAQLPYS-------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        91 ~id~li~~ag~~~~-------------~~~~~~n~~g~~~~~  119 (120)
                      ++|++|||+|...+             ...+++|+.|++.++
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  120 (255)
T PRK06057         79 SVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCC  120 (255)
T ss_pred             CCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHH
Confidence            99999999997531             345678888877654

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2.1e-17  Score=114.21  Aligned_cols=106  Identities=30%  Similarity=0.391  Sum_probs=91.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      +++++|||++++||.+++++|+++|++|++++|+..+.++..+.+...+.++.++.+|+++++++.++++++.+.+ +++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i   79 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARF-GGI   79 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCC
Confidence            4689999999999999999999999999999999877777777776667788899999999999999999999988 899


Q ss_pred             cEEEecCCCCCcc------------ceeeeeccceeccc
Q 033396           93 NILVSSAQLPYSQ------------RKFFVKSRGPYGSI  119 (120)
Q Consensus        93 d~li~~ag~~~~~------------~~~~~n~~g~~~~~  119 (120)
                      |++|||+|.....            +.+++|+.+++.++
T Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~  118 (263)
T PRK06181         80 DILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCT  118 (263)
T ss_pred             CEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHH
Confidence            9999999986532            23677888877654

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.75  E-value=7.8e-18  Score=116.23  Aligned_cols=104  Identities=25%  Similarity=0.302  Sum_probs=87.4

Q ss_pred             EEEEecCCCchHHHHHHHHHH----CCCEEEEeeCChHHHHHHHHHHHh--cCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           15 TALVTGGTKGIGYAVVEELAA----FGAIVHTCSRNETELNQRIQEWKS--KGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~----~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++|||+++|||.+++++|++    +|++|++++|+.+.+++..+++..  .+..+.++.+|++++++++++++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    799999999998888888777765  25578899999999999999999998876


Q ss_pred             CCc----ccEEEecCCCCCc--------------cceeeeeccceeccc
Q 033396           89 DGK----LNILVSSAQLPYS--------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~----id~li~~ag~~~~--------------~~~~~~n~~g~~~~~  119 (120)
                       ++    .|+||||||+...              .+.+++|+.|++.++
T Consensus        82 -g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~  129 (256)
T TIGR01500        82 -RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLT  129 (256)
T ss_pred             -ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHH
Confidence             44    3699999997421              245789999988765

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.75  E-value=6.3e-18  Score=115.94  Aligned_cols=108  Identities=26%  Similarity=0.382  Sum_probs=86.1

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      |++++|+++||||+++||++++++|+++|++|++..+ .....+....++   +.++.++.+|+++++++.++++++.+.
T Consensus         1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (253)
T PRK08642          1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---GDRAIALQADVTDREQVQAMFATATEH   77 (253)
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999988755 444444443333   356888999999999999999999988


Q ss_pred             cCCc-ccEEEecCCCCC-----------------ccceeeeeccceecccC
Q 033396           88 FDGK-LNILVSSAQLPY-----------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~-id~li~~ag~~~-----------------~~~~~~~n~~g~~~~~~  120 (120)
                      + ++ +|++|||+|+..                 +.+.+++|+.+++++++
T Consensus        78 ~-g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  127 (253)
T PRK08642         78 F-GKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQ  127 (253)
T ss_pred             h-CCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHH
Confidence            8 55 999999998631                 13457889988887653

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.75  E-value=9.8e-18  Score=114.98  Aligned_cols=109  Identities=28%  Similarity=0.309  Sum_probs=91.1

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcC-CeEEEEeccCC--CHHHHHHHHHHHHh
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-LQVSGNACDLK--IRAQREKLMETVSS   86 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~--~~~~~~~~~~~~~~   86 (120)
                      .+++|+++|||++++||.+++++|++.|++|++++|+.....+..+++...+ .++.++.+|++  +++++.++++++.+
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999877777777776543 45677778885  77889999999999


Q ss_pred             hcCCcccEEEecCCCCCc------------cceeeeeccceeccc
Q 033396           87 QFDGKLNILVSSAQLPYS------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~~------------~~~~~~n~~g~~~~~  119 (120)
                      .+ +++|+||||||....            .+.+++|+.|+++++
T Consensus        89 ~~-~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~  132 (247)
T PRK08945         89 QF-GRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLT  132 (247)
T ss_pred             Hh-CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHH
Confidence            88 899999999997532            345778888877765

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.75  E-value=6.4e-18  Score=115.95  Aligned_cols=101  Identities=25%  Similarity=0.353  Sum_probs=86.3

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +.+++|+++|||++++||.+++++|+++|++|++++|+.         +...+.++..+.+|+++++++.++++++.+++
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   74 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQEDYPFATFVLDVSDAAAVAQVCQRLLAET   74 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999999999886         22235678899999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                       +++|++|||+|....           .+.+++|+.+++.++
T Consensus        75 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  115 (252)
T PRK08220         75 -GPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLF  115 (252)
T ss_pred             -CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHH
Confidence             899999999998652           345677887777654

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.74  E-value=1.4e-17  Score=113.13  Aligned_cols=107  Identities=28%  Similarity=0.332  Sum_probs=87.6

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +.+++|+++|||++++||+.++++|+++|++|++++|++.+..+...++...  .+..+.+|++|.+++.++++++.+.+
T Consensus         3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (239)
T PRK12828          3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD--ALRIGGIDLVDPQAARRAVDEVNRQF   80 (239)
T ss_pred             CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc--CceEEEeecCCHHHHHHHHHHHHHHh
Confidence            4477999999999999999999999999999999999887665555555433  35567899999999999999999999


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceecc
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGS  118 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~  118 (120)
                       +++|++||++|...+           .+.+.+|+.+++.+
T Consensus        81 -~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  120 (239)
T PRK12828         81 -GRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNA  120 (239)
T ss_pred             -CCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHH
Confidence             899999999997642           23356777776654

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.74  E-value=1.2e-17  Score=113.84  Aligned_cols=104  Identities=24%  Similarity=0.297  Sum_probs=86.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      |+++|||++++||.+++++|++.|++|+++.| +....++..+++...+.++.++.+|+++++++.++++++.+.+ +++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   79 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAEL-GPI   79 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            68999999999999999999999999999888 5555555555555556778899999999999999999999988 899


Q ss_pred             cEEEecCCCCCc-----------cceeeeeccceecc
Q 033396           93 NILVSSAQLPYS-----------QRKFFVKSRGPYGS  118 (120)
Q Consensus        93 d~li~~ag~~~~-----------~~~~~~n~~g~~~~  118 (120)
                      |+||||+|....           ...+.+|+.+++.+
T Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  116 (242)
T TIGR01829        80 DVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNV  116 (242)
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHH
Confidence            999999998642           34456777776554

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.74  E-value=9e-18  Score=116.92  Aligned_cols=103  Identities=21%  Similarity=0.283  Sum_probs=86.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      .|+++||||+++||++++++|+++|++|++++|+.+..++..+.+   +.++.++.+|++|++++.++++++.+.+ +++
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   77 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY---GDRLWVLQLDVTDSAAVRAVVDRAFAAL-GRI   77 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCceEEEEccCCCHHHHHHHHHHHHHHc-CCC
Confidence            378999999999999999999999999999999876665444332   4467889999999999999999998888 899


Q ss_pred             cEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           93 NILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        93 d~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      |+||||+|....           ...+++|+.|+++++
T Consensus        78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~  115 (276)
T PRK06482         78 DVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVI  115 (276)
T ss_pred             CEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHH
Confidence            999999998653           244668888887664

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.74  E-value=1.7e-17  Score=113.06  Aligned_cols=108  Identities=29%  Similarity=0.373  Sum_probs=88.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChH-HHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET-ELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ++++|+++|||++++||.+++++|+++|++|+++.++.. ..+...+++...+.++..+.+|+++++++.++++++.+.+
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF   81 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            467899999999999999999999999999988877654 3555555665567788999999999999999999999988


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceecc
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGS  118 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~  118 (120)
                       +++|++|||+|....           .+.+.+|+.+++.+
T Consensus        82 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l  121 (248)
T PRK05557         82 -GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNL  121 (248)
T ss_pred             -CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHH
Confidence             899999999998653           23355677666554

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.74  E-value=1.3e-17  Score=114.54  Aligned_cols=102  Identities=23%  Similarity=0.332  Sum_probs=85.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      ++++|||++++||.+++++|+++|++|++++|+++.++...+.+   +.++.++.+|+++++++.++++++.+.+ +++|
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-~~id   76 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEW-RNID   76 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---ccceEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            36899999999999999999999999999999987766554443   4568889999999999999999999988 8999


Q ss_pred             EEEecCCCCC------------ccceeeeeccceeccc
Q 033396           94 ILVSSAQLPY------------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        94 ~li~~ag~~~------------~~~~~~~n~~g~~~~~  119 (120)
                      ++|||+|...            +.+.+++|+.|++.++
T Consensus        77 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  114 (248)
T PRK10538         77 VLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMT  114 (248)
T ss_pred             EEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHH
Confidence            9999999743            1345788888877654

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.73  E-value=2.2e-17  Score=113.25  Aligned_cols=105  Identities=28%  Similarity=0.346  Sum_probs=88.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      +|+++|||++++||++++++|+++|++|++++|+....+...+.+...+.++..+.+|+++++++.++++++.+.+ +++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~   79 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEF-GGL   79 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc-CCC
Confidence            4689999999999999999999999999999999877777777666666788999999999999999999999888 789


Q ss_pred             cEEEecCCCCCc-----------cceeeeeccceecc
Q 033396           93 NILVSSAQLPYS-----------QRKFFVKSRGPYGS  118 (120)
Q Consensus        93 d~li~~ag~~~~-----------~~~~~~n~~g~~~~  118 (120)
                      |++|||+|....           ...+.+|+.|++.+
T Consensus        80 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~  116 (255)
T TIGR01963        80 DILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHT  116 (255)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHH
Confidence            999999998653           22345676665544

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.73  E-value=1.5e-17  Score=113.43  Aligned_cols=103  Identities=22%  Similarity=0.272  Sum_probs=87.0

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRN-ETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   94 (120)
                      ++|||++++||.+++++|+++|++|+++++. .+..+...+++...+.++.++.+|+++++++.++++++.+.+ +++|+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i~~   79 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEH-GAYYG   79 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHc-CCCCE
Confidence            5899999999999999999999999988765 455666667776667789999999999999999999988888 89999


Q ss_pred             EEecCCCCCc-----------cceeeeeccceeccc
Q 033396           95 LVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        95 li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +|||+|+...           ...+++|+.++++++
T Consensus        80 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  115 (239)
T TIGR01831        80 VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVI  115 (239)
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHH
Confidence            9999998542           345778888877654

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.73  E-value=9.5e-18  Score=116.77  Aligned_cols=99  Identities=22%  Similarity=0.322  Sum_probs=82.5

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      |+++||||++|||.+++++|+++|++|++++|+....+...    ..  .+.++.+|+++++++.++++++.+.+ +++|
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id   74 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA----AA--GFTAVQLDVNDGAALARLAEELEAEH-GGLD   74 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HC--CCeEEEeeCCCHHHHHHHHHHHHHhc-CCCC
Confidence            68999999999999999999999999999999876654332    22  35678899999999999999999988 8999


Q ss_pred             EEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           94 ILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        94 ~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      ++|||+|+...           .+.+++|+.|++.++
T Consensus        75 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  111 (274)
T PRK05693         75 VLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVT  111 (274)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHH
Confidence            99999997542           345678888877654

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.73  E-value=2.9e-17  Score=112.06  Aligned_cols=105  Identities=21%  Similarity=0.227  Sum_probs=86.0

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChH-HHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET-ELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      |+++|||++++||++++++|+++|++|++++|+.. ...+....+...+.++.++.+|+++++++.++++++.+.+ +++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-~~i   81 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEE-GPV   81 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence            68999999999999999999999999999999853 2333333333345678899999999999999999999998 899


Q ss_pred             cEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           93 NILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        93 d~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      |++|||+|....           +..+++|+.++++++
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  119 (245)
T PRK12824         82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVT  119 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHH
Confidence            999999998652           345678888877654

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.72  E-value=3.7e-17  Score=112.64  Aligned_cols=104  Identities=23%  Similarity=0.282  Sum_probs=86.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      +|+++|||++++||++++++|+++|++|++++|+....+...+.+  .+..+..+.+|+++++++.++++++.+++ +++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~   78 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADAL--GDARFVPVACDLTDAASLAAALANAAAER-GPV   78 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--cCCceEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            578999999999999999999999999999999987776666555  24568889999999999999999999998 889


Q ss_pred             cEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           93 NILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        93 d~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      |++|||+|....           .+.+.+|+.+++.+.
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  116 (257)
T PRK07074         79 DVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCV  116 (257)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHH
Confidence            999999998653           223457777766543

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.3e-17  Score=115.02  Aligned_cols=99  Identities=12%  Similarity=0.164  Sum_probs=76.5

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.....+.  .  ..+. ...+.+|+++.+++.+.       +
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~--~--~~~~-~~~~~~D~~~~~~~~~~-------~   77 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSES--N--DESP-NEWIKWECGKEESLDKQ-------L   77 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhh--h--ccCC-CeEEEeeCCCHHHHHHh-------c
Confidence            447899999999999999999999999999999999876321111  1  1122 25678999999876643       3


Q ss_pred             CCcccEEEecCCCCC--------ccceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPY--------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~--------~~~~~~~n~~g~~~~~~  120 (120)
                       +++|++|||||+..        +.+.+++|+.|++.++|
T Consensus        78 -~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~  116 (245)
T PRK12367         78 -ASLDVLILNHGINPGGRQDPENINKALEINALSSWRLLE  116 (245)
T ss_pred             -CCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHH
Confidence             78999999999853        25668999999988764

>PRK07069 short chain dehydrogenase; Validated

Probab=99.71  E-value=4.8e-17  Score=111.48  Aligned_cols=103  Identities=22%  Similarity=0.278  Sum_probs=85.1

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHHhcC--CeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRN-ETELNQRIQEWKSKG--LQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      ++|||++++||.++++.|+++|++|++++|+ .+.+++..+++....  ..+..+.+|+++++++.++++++.+++ +++
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   80 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAM-GGL   80 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHc-CCc
Confidence            7999999999999999999999999999998 566666666665432  345668899999999999999999999 899


Q ss_pred             cEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           93 NILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        93 d~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      |++|||+|....           .+.+++|+.+++.++
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  118 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGC  118 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHH
Confidence            999999998653           345678888776543

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.71  E-value=7e-17  Score=108.03  Aligned_cols=103  Identities=23%  Similarity=0.300  Sum_probs=87.5

Q ss_pred             cCcEEEEecC-CCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHh-hcC
Q 033396           12 KGMTALVTGG-TKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSS-QFD   89 (120)
Q Consensus        12 ~~~~~litGa-~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   89 (120)
                      ..|.++|||| .||||.+++++|++.|+.|+.+.|+.+...++..+.     ....+.+|+++++++..+..++++ .+ 
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~-----gl~~~kLDV~~~~~V~~v~~evr~~~~-   79 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF-----GLKPYKLDVSKPEEVVTVSGEVRANPD-   79 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh-----CCeeEEeccCChHHHHHHHHHHhhCCC-
Confidence            5678999997 588999999999999999999999987765554332     267788999999999999999998 55 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      |++|+|+||||..--           +++|++|++|.++|.|
T Consensus        80 Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~  121 (289)
T KOG1209|consen   80 GKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCR  121 (289)
T ss_pred             CceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHH
Confidence            999999999998652           5779999999988764

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.71  E-value=3.8e-17  Score=114.34  Aligned_cols=109  Identities=19%  Similarity=0.149  Sum_probs=91.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ...+|.|+||||.+|+|..+|++|.+.|.+|......++..+.+..+..  ..+...++.|++++++++++.+.++++.+
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~--s~rl~t~~LDVT~~esi~~a~~~V~~~l~  103 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK--SPRLRTLQLDVTKPESVKEAAQWVKKHLG  103 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc--CCcceeEeeccCCHHHHHHHHHHHHHhcc
Confidence            4688999999999999999999999999999988877777666666553  55677779999999999999998888763


Q ss_pred             -CcccEEEecCCCCCc------------cceeeeeccceecccC
Q 033396           90 -GKLNILVSSAQLPYS------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 -g~id~li~~ag~~~~------------~~~~~~n~~g~~~~~~  120 (120)
                       .++..||||||+...            ...+++|+.|++.++|
T Consensus       104 ~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~  147 (322)
T KOG1610|consen  104 EDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTK  147 (322)
T ss_pred             cccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHH
Confidence             359999999998752            5778999999988764

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.71  E-value=1.1e-16  Score=109.07  Aligned_cols=107  Identities=21%  Similarity=0.206  Sum_probs=87.1

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+++|+++|||++++||.++++.|+++|++|++++|++...+...+.+... ..+.++.+|+++++++.++++++...+ 
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   79 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY-GNIHYVVGDVSSTESARNVIEKAAKVL-   79 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEECCCCCHHHHHHHHHHHHHHh-
Confidence            367899999999999999999999999999999999987776655555443 357889999999999999999988888 


Q ss_pred             CcccEEEecCCCCCc---------cceeeeeccceecc
Q 033396           90 GKLNILVSSAQLPYS---------QRKFFVKSRGPYGS  118 (120)
Q Consensus        90 g~id~li~~ag~~~~---------~~~~~~n~~g~~~~  118 (120)
                      +++|.+|+|+|....         ...+++|+.+++.+
T Consensus        80 ~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~  117 (238)
T PRK05786         80 NAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYA  117 (238)
T ss_pred             CCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHH
Confidence            899999999986532         23356666665543

>PRK08324 short chain dehydrogenase; Validated

Probab=99.71  E-value=5.6e-17  Score=125.50  Aligned_cols=108  Identities=33%  Similarity=0.429  Sum_probs=92.7

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+.+|+++||||+++||.+++++|+++|++|++++|+...++...+++... ..+.++.+|+++++++.++++++.+.+ 
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~~-  496 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAALAF-  496 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHHHc-
Confidence            367899999999999999999999999999999999988777766666544 578899999999999999999999988 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      |++|++|||+|+...           ...+++|+.|++.++
T Consensus       497 g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  537 (681)
T PRK08324        497 GGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVA  537 (681)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            899999999997653           345678888877654

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.70  E-value=1.1e-16  Score=109.03  Aligned_cols=108  Identities=26%  Similarity=0.370  Sum_probs=86.4

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      +..|+++||||+++||.+++++|+++|++|++..+.. ...+.....+...+.++.++.+|+++++++.++++++.+.+ 
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-   82 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERF-   82 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHc-
Confidence            4467999999999999999999999999987766654 44555555566567778899999999999999999998888 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +++|++||++|...+           ...+++|+.++++++
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  123 (249)
T PRK12825         83 GRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLL  123 (249)
T ss_pred             CCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHH
Confidence            899999999997543           233566777666543

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.70  E-value=6e-18  Score=119.75  Aligned_cols=110  Identities=20%  Similarity=0.217  Sum_probs=75.9

Q ss_pred             ccccCcEEEEecCC--CchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH----------HhcCC-----eEEEEeccC
Q 033396            9 WSLKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW----------KSKGL-----QVSGNACDL   71 (120)
Q Consensus         9 ~~~~~~~~litGa~--~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~----------~~~~~-----~~~~~~~D~   71 (120)
                      .++.+|+++|||++  +|||+++|+.|+++|++|++.++.+ .+.......          ...+.     ++..+..|+
T Consensus         4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~   82 (299)
T PRK06300          4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASF   82 (299)
T ss_pred             cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhc
Confidence            45789999999996  9999999999999999999977542 000000000          00011     011112233


Q ss_pred             CCH------------------HHHHHHHHHHHhhcCCcccEEEecCCCCC-------------ccceeeeeccceecccC
Q 033396           72 KIR------------------AQREKLMETVSSQFDGKLNILVSSAQLPY-------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        72 ~~~------------------~~~~~~~~~~~~~~~g~id~li~~ag~~~-------------~~~~~~~n~~g~~~~~~  120 (120)
                      +++                  ++++++++++.+++ |++|+||||||+..             |++.+++|+.|+++++|
T Consensus        83 ~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~-G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~  161 (299)
T PRK06300         83 DTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDF-GHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLS  161 (299)
T ss_pred             CCCEEeecccCccccccCCCHHHHHHHHHHHHHHc-CCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            222                  35899999999999 89999999998642             25668999999988764

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.69  E-value=1.3e-16  Score=109.48  Aligned_cols=109  Identities=30%  Similarity=0.386  Sum_probs=86.6

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH--HHHHHHHHHhcC-CeEEEEeccCCC-HHHHHHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE--LNQRIQEWKSKG-LQVSGNACDLKI-RAQREKLMETVS   85 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~D~~~-~~~~~~~~~~~~   85 (120)
                      ++.+|+++|||+++|||++++++|+++|++|+++.+....  .+...+.....+ ..+....+|+++ +++++.+++++.
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999998888776543  233333222222 368888899998 999999999999


Q ss_pred             hhcCCcccEEEecCCCCC------------ccceeeeeccceeccc
Q 033396           86 SQFDGKLNILVSSAQLPY------------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~------------~~~~~~~n~~g~~~~~  119 (120)
                      +.+ |++|++|||||+..            +++.+++|+.|++.++
T Consensus        82 ~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~  126 (251)
T COG1028          82 EEF-GRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLT  126 (251)
T ss_pred             HHc-CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHH
Confidence            999 89999999999864            2466788888777654

>PRK12742 oxidoreductase; Provisional

Probab=99.69  E-value=1.1e-16  Score=108.92  Aligned_cols=100  Identities=28%  Similarity=0.389  Sum_probs=77.4

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .+++|+++||||+++||++++++|+++|++|+++.+ +.+..+++.+++   +  +.++.+|+++++++.+++++    +
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~---~--~~~~~~D~~~~~~~~~~~~~----~   73 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET---G--ATAVQTDSADRDAVIDVVRK----S   73 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh---C--CeEEecCCCCHHHHHHHHHH----h
Confidence            367899999999999999999999999999988866 444444443332   2  45678999999887777653    4


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                       +++|++|||+|....           ++.+++|+.|++.++
T Consensus        74 -~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  114 (237)
T PRK12742         74 -GALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHAS  114 (237)
T ss_pred             -CCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHH
Confidence             789999999998542           456788888887764

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.69  E-value=2.7e-16  Score=107.54  Aligned_cols=108  Identities=19%  Similarity=0.211  Sum_probs=95.2

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-----EEEEeeCChHHHHHHHHHHHhc----CCeEEEEeccCCCHHHHHHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-----IVHTCSRNETELNQRIQEWKSK----GLQVSGNACDLKIRAQREKLME   82 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-----~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~   82 (120)
                      .+|+++|||+++|||.++|++|++...     +++++.|+.++.++.+..+.+.    ..++.++..|+++..++.++..
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            478999999999999999999988552     4788899999999999988764    3588899999999999999999


Q ss_pred             HHHhhcCCcccEEEecCCCCCc--------------------------------------cceeeeeccceecccC
Q 033396           83 TVSSQFDGKLNILVSSAQLPYS--------------------------------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        83 ~~~~~~~g~id~li~~ag~~~~--------------------------------------~~~~~~n~~g~~~~~~  120 (120)
                      ++..+| .++|.+..|||....                                      +.+|++|++|+|++++
T Consensus        82 di~~rf-~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~  156 (341)
T KOG1478|consen   82 DIKQRF-QRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIR  156 (341)
T ss_pred             HHHHHh-hhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHh
Confidence            999999 899999999999762                                      4679999999998863

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.3e-16  Score=109.68  Aligned_cols=100  Identities=23%  Similarity=0.257  Sum_probs=81.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      +|+++||||+++||++++++|++.|++|++++|+.....+..+.+...+..+.++.+|+++++++.++++       +++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~i   74 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE-------WDV   74 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc-------CCC
Confidence            5689999999999999999999999999999998877666666555556678899999999988777652       479


Q ss_pred             cEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           93 NILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        93 d~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      |+||||+|....           .+.+++|+.+++.++
T Consensus        75 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  112 (257)
T PRK09291         75 DVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELT  112 (257)
T ss_pred             CEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHH
Confidence            999999998652           345677887776543

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.68  E-value=1.2e-16  Score=103.96  Aligned_cols=103  Identities=32%  Similarity=0.307  Sum_probs=88.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++.|+.+++||+..|||+++++.|++.|++|+.+.|+++.+..+.++.   ...+..+..|+++++.+.+.+-.+     
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~---p~~I~Pi~~Dls~wea~~~~l~~v-----   75 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET---PSLIIPIVGDLSAWEALFKLLVPV-----   75 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC---CcceeeeEecccHHHHHHHhhccc-----
Confidence            468999999999999999999999999999999999999988887765   444778889999988777666544     


Q ss_pred             CcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                      +++|.++||||+-.           +.+.|++|+.++++.+|
T Consensus        76 ~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q  117 (245)
T KOG1207|consen   76 FPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQ  117 (245)
T ss_pred             CchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHH
Confidence            79999999999955           36789999999998754

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.67  E-value=2.4e-16  Score=107.09  Aligned_cols=103  Identities=28%  Similarity=0.448  Sum_probs=85.3

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   94 (120)
                      ++|||++++||..++++|+++|++|++++|+. ...+...+.+...+.++..+.+|++++++++++++++.+.+ +++|+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~   79 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEEL-GPIDI   79 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh-CCCCE
Confidence            58999999999999999999999999998875 44555556666667778999999999999999999998888 89999


Q ss_pred             EEecCCCCCc-----------cceeeeeccceeccc
Q 033396           95 LVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        95 li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +||++|....           ++.+++|+.+++.++
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  115 (239)
T TIGR01830        80 LVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLT  115 (239)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHH
Confidence            9999998642           344667777766553

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.67  E-value=3.7e-16  Score=106.94  Aligned_cols=102  Identities=20%  Similarity=0.289  Sum_probs=83.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc-CCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      |+++||||+++||.+++++|++.|++|++++|+++..+...+.+... +.++.++.+|+++++++.++++++.+    ++
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~----~~   77 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA----LP   77 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh----cC
Confidence            57999999999999999999999999999999987776666665543 56889999999999999999887644    46


Q ss_pred             cEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           93 NILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        93 d~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      |++|||+|....           .+.+++|+.+++.++
T Consensus        78 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  115 (243)
T PRK07102         78 DIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALL  115 (243)
T ss_pred             CEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHH
Confidence            999999998653           234677888776654

>PRK08264 short chain dehydrogenase; Validated

Probab=99.67  E-value=1.8e-16  Score=108.02  Aligned_cols=99  Identities=29%  Similarity=0.366  Sum_probs=79.9

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +++.+++++||||+++||++++++|+++|+ +|++++|+.....+       .+..+.++.+|+++++++.+++++.   
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~---   71 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------LGPRVVPLQLDVTDPASVAAAAEAA---   71 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------cCCceEEEEecCCCHHHHHHHHHhc---
Confidence            457889999999999999999999999998 99999998765443       3557889999999999988877653   


Q ss_pred             cCCcccEEEecCCCCCc------------cceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPYS------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~------------~~~~~~n~~g~~~~~  119 (120)
                        +++|++||++|....            .+.+++|+.+++.++
T Consensus        72 --~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  113 (238)
T PRK08264         72 --SDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMA  113 (238)
T ss_pred             --CCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHH
Confidence              789999999998321            344667777766553

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.67  E-value=2.3e-16  Score=116.86  Aligned_cols=104  Identities=28%  Similarity=0.343  Sum_probs=84.1

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh--HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE--TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .+++++++|||++++||.+++++|+++|++|+++++..  +.+.+..+++   +  ...+.+|+++++++.++++++.+.
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~---~--~~~~~~Dv~~~~~~~~~~~~~~~~  281 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV---G--GTALALDITAPDAPARIAEHLAER  281 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc---C--CeEEEEeCCCHHHHHHHHHHHHHh
Confidence            35789999999999999999999999999999998843  2333333322   3  246789999999999999999998


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      + +++|++|||+|+...           ...+++|+.|++++.
T Consensus       282 ~-g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~  323 (450)
T PRK08261        282 H-GGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRIT  323 (450)
T ss_pred             C-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            8 899999999998652           455778888887764

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.67  E-value=1.5e-16  Score=116.57  Aligned_cols=101  Identities=25%  Similarity=0.345  Sum_probs=80.4

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..   ......+..+.+|++|++++.+.+       
T Consensus       174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~---~~~~~~v~~v~~Dvsd~~~v~~~l-------  243 (406)
T PRK07424        174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI---NGEDLPVKTLHWQVGQEAALAELL-------  243 (406)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---hhcCCCeEEEEeeCCCHHHHHHHh-------
Confidence            3468999999999999999999999999999999999876553322   222334678889999998876654       


Q ss_pred             CCcccEEEecCCCCC--------ccceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPY--------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~--------~~~~~~~n~~g~~~~~~  120 (120)
                       +++|++|||||+..        +.+.+++|+.|++.+++
T Consensus       244 -~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~  282 (406)
T PRK07424        244 -EKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLME  282 (406)
T ss_pred             -CCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence             78999999999864        25668999999887753

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.67  E-value=2.1e-16  Score=107.17  Aligned_cols=98  Identities=29%  Similarity=0.347  Sum_probs=80.5

Q ss_pred             EEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccEEE
Q 033396           17 LVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILV   96 (120)
Q Consensus        17 litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~li   96 (120)
                      +|||++++||.+++++|+++|++|++++|+....+...++++ .+..+.++.+|+++++++.+++++.     +++|++|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~id~li   74 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALG-GGAPVRTAALDITDEAAVDAFFAEA-----GPFDHVV   74 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHhc-----CCCCEEE
Confidence            589999999999999999999999999999877666665554 3567888999999999998888763     7899999


Q ss_pred             ecCCCCCc-----------cceeeeeccceecccC
Q 033396           97 SSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        97 ~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      ||+|....           .+.+++|+.+++.++|
T Consensus        75 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  109 (230)
T PRK07041         75 ITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR  109 (230)
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh
Confidence            99998542           3456788888776653

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.67  E-value=9.6e-16  Score=101.39  Aligned_cols=89  Identities=25%  Similarity=0.360  Sum_probs=71.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC-CEEEEeeCCh---HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           15 TALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNE---TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      +++|||+.++||..++++|++++ .+|++++|+.   ...++..++++..+.++.++.+|++|++++.++++++.+.+ +
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~-~   80 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRF-G   80 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTS-S
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhcc-C
Confidence            79999999999999999999998 5799999983   24556788888889999999999999999999999999999 9


Q ss_pred             cccEEEecCCCCCc
Q 033396           91 KLNILVSSAQLPYS  104 (120)
Q Consensus        91 ~id~li~~ag~~~~  104 (120)
                      +|+++||++|...+
T Consensus        81 ~i~gVih~ag~~~~   94 (181)
T PF08659_consen   81 PIDGVIHAAGVLAD   94 (181)
T ss_dssp             -EEEEEE-------
T ss_pred             Ccceeeeeeeeecc
Confidence            99999999999874

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.66  E-value=3.9e-16  Score=106.59  Aligned_cols=101  Identities=28%  Similarity=0.311  Sum_probs=80.6

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++++++++|||++++||..+++.|+++|++|++++|+.+..++..+..     .+.++.+|+++++++.++++.    .
T Consensus         5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~----~   75 (245)
T PRK07060          5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-----GCEPLRLDVGDDAAIRAALAA----A   75 (245)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeEEEecCCCHHHHHHHHHH----h
Confidence            4578999999999999999999999999999999999876665444332     245678999999988887765    3


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                       +++|++|||+|....           .+.+.+|+.+++.++
T Consensus        76 -~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  116 (245)
T PRK07060         76 -GAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVA  116 (245)
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence             789999999998642           344567888777654

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.66  E-value=9.7e-16  Score=104.86  Aligned_cols=100  Identities=21%  Similarity=0.224  Sum_probs=79.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHH-HHhhcC--Cc
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMET-VSSQFD--GK   91 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~~~~~~--g~   91 (120)
                      +++|||++++||.+++++|+++|++|++++|+..+..     ....+.++.++.+|+++++++++++.+ +.+.++  ++
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~   77 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL-----AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGAS   77 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh-----hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCC
Confidence            6999999999999999999999999999998764321     122356788999999999999998876 554441  47


Q ss_pred             ccEEEecCCCCCc------------cceeeeeccceeccc
Q 033396           92 LNILVSSAQLPYS------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        92 id~li~~ag~~~~------------~~~~~~n~~g~~~~~  119 (120)
                      +|++|||+|....            .+.+++|+.|++.++
T Consensus        78 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  117 (243)
T PRK07023         78 RVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLT  117 (243)
T ss_pred             ceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHH
Confidence            9999999998542            466899999977654

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.66  E-value=4.7e-16  Score=104.58  Aligned_cols=109  Identities=19%  Similarity=0.287  Sum_probs=85.4

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHH-CCCEEEEe-eCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAA-FGAIVHTC-SRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~-~g~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ..|.++||||++|||..++++|.+ .|..+++. .|+++...+..+.......+++.++.|+++.++++++++++.+-.+
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg   81 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVG   81 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcc
Confidence            456699999999999999999988 44565555 4556554333333334578999999999999999999999988632


Q ss_pred             -CcccEEEecCCCCCc------------cceeeeeccceecccC
Q 033396           90 -GKLNILVSSAQLPYS------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 -g~id~li~~ag~~~~------------~~~~~~n~~g~~~~~~  120 (120)
                       .++|+||||||+...            .+.+++|..||..++|
T Consensus        82 ~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q  125 (249)
T KOG1611|consen   82 SDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQ  125 (249)
T ss_pred             cCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHH
Confidence             579999999999773            4668999999877654

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.65  E-value=8.8e-16  Score=104.12  Aligned_cols=98  Identities=19%  Similarity=0.282  Sum_probs=79.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      |+++|||++++||.+++++|+++|++|++++|++...+++. +   . ..+.++.+|++|+++++++++++.+   +++|
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~---~-~~~~~~~~D~~d~~~~~~~~~~~~~---~~id   73 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-A---L-PGVHIEKLDMNDPASLDQLLQRLQG---QRFD   73 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-h---c-cccceEEcCCCCHHHHHHHHHHhhc---CCCC
Confidence            67999999999999999999999999999999876654332 1   1 2466788999999999999988754   5799


Q ss_pred             EEEecCCCCCc-------------cceeeeeccceeccc
Q 033396           94 ILVSSAQLPYS-------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        94 ~li~~ag~~~~-------------~~~~~~n~~g~~~~~  119 (120)
                      ++|||+|+...             .+.+.+|+.+++.++
T Consensus        74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  112 (225)
T PRK08177         74 LLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLA  112 (225)
T ss_pred             EEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHH
Confidence            99999998531             456788988887654

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.65  E-value=5.4e-16  Score=100.27  Aligned_cols=105  Identities=25%  Similarity=0.320  Sum_probs=84.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHH---HHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQ---RIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      |+++|||++++||.+++++|+++|+ .|++++|++...+.   ..+++...+.++.++.+|+++++++.+++++....+ 
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   79 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARL-   79 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            5789999999999999999999996 68888886543322   234555557788899999999999999999998888 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +++|.+|||+|....           +..+++|+.+++.++
T Consensus        80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  120 (180)
T smart00822       80 GPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLH  120 (180)
T ss_pred             CCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHH
Confidence            899999999997542           345778888776654

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.64  E-value=8.9e-16  Score=105.34  Aligned_cols=102  Identities=20%  Similarity=0.234  Sum_probs=80.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc-
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK-   91 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~-   91 (120)
                      |+++|||++++||++++++|+++|++|++++|+. +.+.+..+   ..+.++.++.+|++++++++++++++.+.+ +. 
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~   77 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE---QYNSNLTFHSLDLQDVHELETNFNEILSSI-QED   77 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh---ccCCceEEEEecCCCHHHHHHHHHHHHHhc-Ccc
Confidence            5899999999999999999999999999999986 33332222   235678889999999999999999988766 32 


Q ss_pred             -c--cEEEecCCCCCc------------cceeeeeccceeccc
Q 033396           92 -L--NILVSSAQLPYS------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        92 -i--d~li~~ag~~~~------------~~~~~~n~~g~~~~~  119 (120)
                       +  .++|+|+|...+            .+.+++|+.+++.++
T Consensus        78 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  120 (251)
T PRK06924         78 NVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILT  120 (251)
T ss_pred             cCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHH
Confidence             2  279999998532            355788998877654

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.64  E-value=5.7e-16  Score=106.05  Aligned_cols=98  Identities=22%  Similarity=0.237  Sum_probs=79.0

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      ++++||||++|||.+++++|+++|++|++++|+++.+++..+    ...++.++.+|++++++++++++++.    ..+|
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~----~~~d   73 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT----QSANIFTLAFDVTDHPGTKAALSQLP----FIPE   73 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----hcCCCeEEEeeCCCHHHHHHHHHhcc----cCCC
Confidence            679999999999999999999999999999998766544433    23467889999999999999987753    2479


Q ss_pred             EEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           94 ILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        94 ~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      .+|||+|....           ++.+++|+.|+++++
T Consensus        74 ~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  110 (240)
T PRK06101         74 LWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCI  110 (240)
T ss_pred             EEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999986431           346788888887765

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.63  E-value=5.9e-16  Score=105.21  Aligned_cols=97  Identities=19%  Similarity=0.235  Sum_probs=78.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   94 (120)
                      .++||||++|||++++++|+++|++|++++|+.+++++..+++     .+.++.+|++++++++++++++.    +++|+
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~----~~id~   72 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFP----HHLDT   72 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHh----hcCcE
Confidence            4899999999999999999999999999999987766555443     24578899999999999887663    25899


Q ss_pred             EEecCCCCC----------------ccceeeeeccceecccC
Q 033396           95 LVSSAQLPY----------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        95 li~~ag~~~----------------~~~~~~~n~~g~~~~~~  120 (120)
                      +|||+|...                +.+.+++|+.++++++|
T Consensus        73 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~  114 (223)
T PRK05884         73 IVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQ  114 (223)
T ss_pred             EEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHH
Confidence            999998421                24557899999887764

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.63  E-value=1.1e-15  Score=129.77  Aligned_cols=106  Identities=19%  Similarity=0.240  Sum_probs=87.2

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHC-CCEEEEeeCCh-------------------------------------------
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNE-------------------------------------------   47 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~-g~~v~~~~~~~-------------------------------------------   47 (120)
                      +++++|||||++|||.+++++|+++ |++|++++|+.                                           
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            6889999999999999999999998 69999999982                                           


Q ss_pred             ----HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccEEEecCCCCCc-----------cceeeeec
Q 033396           48 ----TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSAQLPYS-----------QRKFFVKS  112 (120)
Q Consensus        48 ----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~-----------~~~~~~n~  112 (120)
                          .+.....+.+...|..+.++.+|++|.+++.++++++.+.  ++||+||||||+...           .+++++|+
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~--g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv 2153 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT--LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKV 2153 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh--CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHH
Confidence                0111223344556788999999999999999999998776  579999999998663           56789999


Q ss_pred             cceeccc
Q 033396          113 RGPYGSI  119 (120)
Q Consensus       113 ~g~~~~~  119 (120)
                      .|++++.
T Consensus      2154 ~G~~~Ll 2160 (2582)
T TIGR02813      2154 DGLLSLL 2160 (2582)
T ss_pred             HHHHHHH
Confidence            9988764

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.62  E-value=6.3e-16  Score=105.89  Aligned_cols=98  Identities=30%  Similarity=0.470  Sum_probs=81.3

Q ss_pred             cCC--CchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc-CCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccEEE
Q 033396           20 GGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILV   96 (120)
Q Consensus        20 Ga~--~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~li   96 (120)
                      |++  +|||++++++|+++|++|++++|+.+.+++..+++... +.+  ++.+|++++++++++++++.+.++|++|+||
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV   78 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVERFGGRIDILV   78 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHHHCSSESEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhhcCCCeEEEE
Confidence            556  99999999999999999999999998876666666554 444  5999999999999999999999868999999


Q ss_pred             ecCCCCCc---------------cceeeeeccceeccc
Q 033396           97 SSAQLPYS---------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        97 ~~ag~~~~---------------~~~~~~n~~g~~~~~  119 (120)
                      ||+|...+               ...+++|+.+++.++
T Consensus        79 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (241)
T PF13561_consen   79 NNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLA  116 (241)
T ss_dssp             EEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHH
T ss_pred             ecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHH
Confidence            99988764               244677777776654

...

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.62  E-value=5.5e-16  Score=105.43  Aligned_cols=94  Identities=21%  Similarity=0.176  Sum_probs=74.4

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++++|+++|||++++||.+++++|+++|++|++++|+....         ...++..+.+|++++      ++++.+.+ 
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~------~~~~~~~~-   65 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---------LSGNFHFLQLDLSDD------LEPLFDWV-   65 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---------cCCcEEEEECChHHH------HHHHHHhh-
Confidence            46789999999999999999999999999999999875321         134578889999887      44444555 


Q ss_pred             CcccEEEecCCCCC------------ccceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPY------------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~------------~~~~~~~n~~g~~~~~  119 (120)
                      +++|++|||+|+..            +++.+++|+.|+++++
T Consensus        66 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  107 (235)
T PRK06550         66 PSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLT  107 (235)
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHH
Confidence            89999999999742            1355788888887765

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.61  E-value=1.4e-14  Score=104.94  Aligned_cols=91  Identities=20%  Similarity=0.209  Sum_probs=75.3

Q ss_pred             ccCcEEEEecCCCchHHH--HHHHHHHCCCEEEEeeCChHH------------HHHHHHHHHhcCCeEEEEeccCCCHHH
Q 033396           11 LKGMTALVTGGTKGIGYA--VVEELAAFGAIVHTCSRNETE------------LNQRIQEWKSKGLQVSGNACDLKIRAQ   76 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~--~a~~l~~~g~~v~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~D~~~~~~   76 (120)
                      -.+|++||||+++|+|.+  +++.| +.|++++++++....            .+...+.+...+..+..+.+|++++++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            357899999999999999  89999 999998888753321            122333444557678889999999999


Q ss_pred             HHHHHHHHHhhcCCcccEEEecCCCCC
Q 033396           77 REKLMETVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        77 ~~~~~~~~~~~~~g~id~li~~ag~~~  103 (120)
                      ++++++++.+.+ |++|+||||+|...
T Consensus       118 v~~lie~I~e~~-G~IDiLVnSaA~~~  143 (398)
T PRK13656        118 KQKVIELIKQDL-GQVDLVVYSLASPR  143 (398)
T ss_pred             HHHHHHHHHHhc-CCCCEEEECCccCC
Confidence            999999999999 89999999999985

>PRK08017 oxidoreductase; Provisional

Probab=99.59  E-value=6e-15  Score=101.42  Aligned_cols=99  Identities=24%  Similarity=0.266  Sum_probs=79.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      |+++||||+++||.+++++|+++|++|++++|+.+.++...    ..+  +..+.+|+++++++.++++++....++++|
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~----~~~--~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~   76 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN----SLG--FTGILLDLDDPESVERAADEVIALTDNRLY   76 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH----hCC--CeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence            68999999999999999999999999999999876654332    222  567889999999999999988775447899


Q ss_pred             EEEecCCCCCc-----------cceeeeeccceecc
Q 033396           94 ILVSSAQLPYS-----------QRKFFVKSRGPYGS  118 (120)
Q Consensus        94 ~li~~ag~~~~-----------~~~~~~n~~g~~~~  118 (120)
                      .+|||+|...+           ++.+++|+.|++++
T Consensus        77 ~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~  112 (256)
T PRK08017         77 GLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQL  112 (256)
T ss_pred             EEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHH
Confidence            99999997542           34567777776654

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.59  E-value=5e-15  Score=103.75  Aligned_cols=106  Identities=23%  Similarity=0.231  Sum_probs=94.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      +.++|||+++|||.++|.++..+|+.|.++.|+...+.++.++++..  ..++.+..+|+.|-+++..++++..+.+ ++
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~-~~  112 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE-GP  112 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc-CC
Confidence            58999999999999999999999999999999999999998888753  3448899999999999999999999988 99


Q ss_pred             ccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           92 LNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        92 id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      +|.+|+|||+..+           +..+++|+.|+++++|
T Consensus       113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~  152 (331)
T KOG1210|consen  113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAK  152 (331)
T ss_pred             cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHH
Confidence            9999999999663           4668999999988764

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.59  E-value=6.4e-15  Score=111.20  Aligned_cols=102  Identities=19%  Similarity=0.231  Sum_probs=79.8

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc-----C----CeEEEEeccCCCHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-----G----LQVSGNACDLKIRAQREKL   80 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~D~~~~~~~~~~   80 (120)
                      ..++|+++||||+|+||++++++|++.|++|++++|+...++.+..++...     +    .++.++.+|+++.+++.+.
T Consensus        77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a  156 (576)
T PLN03209         77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA  156 (576)
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence            468899999999999999999999999999999999988776665544321     1    3578899999999887665


Q ss_pred             HHHHHhhcCCcccEEEecCCCCC-----ccceeeeeccceeccc
Q 033396           81 METVSSQFDGKLNILVSSAQLPY-----SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        81 ~~~~~~~~~g~id~li~~ag~~~-----~~~~~~~n~~g~~~~~  119 (120)
                      +        +++|+||||+|...     +...+++|+.|+.+++
T Consensus       157 L--------ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl  192 (576)
T PLN03209        157 L--------GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLV  192 (576)
T ss_pred             h--------cCCCEEEEccccccccccchhhHHHHHHHHHHHHH
Confidence            5        78999999999764     2234556666665543

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.58  E-value=6.7e-15  Score=99.62  Aligned_cols=97  Identities=23%  Similarity=0.218  Sum_probs=77.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      |+++|||++++||++++++|+++|++|++++|+....+++.    ..+  +.++.+|++++++++++++++..   +++|
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~----~~~--~~~~~~D~~~~~~v~~~~~~~~~---~~~d   72 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ----ALG--AEALALDVADPASVAGLAWKLDG---EALD   72 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH----hcc--ceEEEecCCCHHHHHHHHHHhcC---CCCC
Confidence            57999999999999999999999999999999876554332    222  45789999999999988776532   4799


Q ss_pred             EEEecCCCCC-------------ccceeeeeccceeccc
Q 033396           94 ILVSSAQLPY-------------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        94 ~li~~ag~~~-------------~~~~~~~n~~g~~~~~  119 (120)
                      ++|||+|...             +++.+++|+.+++.++
T Consensus        73 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  111 (222)
T PRK06953         73 AAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLL  111 (222)
T ss_pred             EEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHH
Confidence            9999999862             1456788888877664

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.58  E-value=4.1e-15  Score=110.95  Aligned_cols=105  Identities=27%  Similarity=0.300  Sum_probs=92.2

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCHHHHHHHHHHHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      ..++||+++||||+|+||.++++++++.+ .++++.++++.+......+++..  ..+..++-+|+.|.+.+.++++.  
T Consensus       246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~--  323 (588)
T COG1086         246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEG--  323 (588)
T ss_pred             hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhc--
Confidence            45899999999999999999999999988 56999999999988888888875  47888999999999999998864  


Q ss_pred             hhcCCcccEEEecCCCCC-------ccceeeeeccceeccc
Q 033396           86 SQFDGKLNILVSSAQLPY-------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~-------~~~~~~~n~~g~~~~~  119 (120)
                          -++|+++|+|++-+       +.+.+++|+.|+.+++
T Consensus       324 ----~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~  360 (588)
T COG1086         324 ----HKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVA  360 (588)
T ss_pred             ----CCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHH
Confidence                37999999999977       4677899999988764

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.58  E-value=4.9e-15  Score=100.62  Aligned_cols=95  Identities=25%  Similarity=0.290  Sum_probs=77.4

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+|+++|||++++||++++++|+++|++|++++|+....         ..  ..++.+|++++++++++++++.+.+  +
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~~--~~~~~~D~~~~~~~~~~~~~~~~~~--~   68 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD---------FP--GELFACDLADIEQTAATLAQINEIH--P   68 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc---------cC--ceEEEeeCCCHHHHHHHHHHHHHhC--C
Confidence            578999999999999999999999999999999986431         11  2467899999999999999988875  5


Q ss_pred             ccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           92 LNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        92 id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +|++|||+|+...           .+.+++|+.+++.++
T Consensus        69 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  107 (234)
T PRK07577         69 VDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVT  107 (234)
T ss_pred             CcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHH
Confidence            8999999998653           234677777776653

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.58  E-value=5.3e-15  Score=105.64  Aligned_cols=99  Identities=18%  Similarity=0.180  Sum_probs=77.1

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++|+++||||+|+||++++++|+++|  ++|++++|+..........+.  +..+.++.+|++|++.+.+++       
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~-------   72 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP--APCLRFFIGDVRDKERLTRAL-------   72 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHH-------
Confidence            468999999999999999999999986  789999887654433333221  246788999999999888877       


Q ss_pred             CCcccEEEecCCCCCc-------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                       .++|+|||+||....       ...+++|+.|+++++
T Consensus        73 -~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll  109 (324)
T TIGR03589        73 -RGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVI  109 (324)
T ss_pred             -hcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHH
Confidence             458999999997531       345778888887765

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.55  E-value=1e-14  Score=103.72  Aligned_cols=100  Identities=14%  Similarity=0.051  Sum_probs=76.7

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+|+++||||+|+||++++++|+++|++|+++.|+..........+...  ..++.++.+|+++++++.+++        
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--------   75 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAI--------   75 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHH--------
Confidence            4789999999999999999999999999998888765443332222211  246888999999999888877        


Q ss_pred             CcccEEEecCCCCC-------ccceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPY-------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~-------~~~~~~~n~~g~~~~~  119 (120)
                      .++|+|||+||...       +...+++|+.|+++++
T Consensus        76 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll  112 (325)
T PLN02989         76 DGCETVFHTASPVAITVKTDPQVELINPAVNGTINVL  112 (325)
T ss_pred             cCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHH
Confidence            45899999999643       1345677888877664

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.55  E-value=1.2e-14  Score=104.54  Aligned_cols=102  Identities=21%  Similarity=0.146  Sum_probs=78.2

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      +++|+++||||+|+||.+++++|++.|++|+.++|+..........+. .+.++.++.+|+++++++.+++++      .
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~------~   74 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN-LAKKIEDHFGDIRDAAKLRKAIAE------F   74 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh-hcCCceEEEccCCCHHHHHHHHhh------c
Confidence            467899999999999999999999999999999987654333322222 233567789999999998888875      3


Q ss_pred             cccEEEecCCCCC-------ccceeeeeccceeccc
Q 033396           91 KLNILVSSAQLPY-------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        91 ~id~li~~ag~~~-------~~~~~~~n~~g~~~~~  119 (120)
                      ++|+|||+|+...       +...+++|+.|+++++
T Consensus        75 ~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll  110 (349)
T TIGR02622        75 KPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLL  110 (349)
T ss_pred             CCCEEEECCcccccccchhCHHHHHHHhHHHHHHHH
Confidence            6899999999643       2345678888776654

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.53  E-value=7.8e-15  Score=97.79  Aligned_cols=82  Identities=29%  Similarity=0.277  Sum_probs=68.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   94 (120)
                      +++|||+++|||.+++++|+++ ++|++++|+..                 .+.+|+++++++++++++    + +++|+
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------------~~~~D~~~~~~~~~~~~~----~-~~id~   58 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------------DVQVDITDPASIRALFEK----V-GKVDA   58 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------------ceEecCCChHHHHHHHHh----c-CCCCE
Confidence            6899999999999999999999 99999998752                 357999999999888865    3 78999


Q ss_pred             EEecCCCCCc-----------cceeeeeccceeccc
Q 033396           95 LVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        95 li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +|||+|...+           .+.+++|+.++++++
T Consensus        59 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~   94 (199)
T PRK07578         59 VVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLV   94 (199)
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHH
Confidence            9999998542           345678888877665

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.53  E-value=1.5e-14  Score=98.52  Aligned_cols=93  Identities=25%  Similarity=0.279  Sum_probs=70.5

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      ++++|||+++|||++++++|++++  ..|+...|+....        ..+.++.++.+|+++.++++++.    +++ ++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--------~~~~~~~~~~~Dls~~~~~~~~~----~~~-~~   67 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--------FQHDNVQWHALDVTDEAEIKQLS----EQF-TQ   67 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--------cccCceEEEEecCCCHHHHHHHH----Hhc-CC
Confidence            469999999999999999999985  5666666654321        12457788999999999887754    445 78


Q ss_pred             ccEEEecCCCCCc-----------------cceeeeeccceeccc
Q 033396           92 LNILVSSAQLPYS-----------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        92 id~li~~ag~~~~-----------------~~~~~~n~~g~~~~~  119 (120)
                      +|+||||+|...+                 .+.+++|+.+++.++
T Consensus        68 id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~  112 (235)
T PRK09009         68 LDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLA  112 (235)
T ss_pred             CCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHH
Confidence            9999999999742                 234677887776654

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.53  E-value=1.9e-14  Score=103.04  Aligned_cols=104  Identities=18%  Similarity=0.112  Sum_probs=77.5

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH-----HHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-----LNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETV   84 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (120)
                      ++++++++||||+|+||++++++|+++|++|++++|....     ++.........+..+.++.+|++|.+++.++++..
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            4678999999999999999999999999999999886432     21111111112346889999999999988888753


Q ss_pred             HhhcCCcccEEEecCCCCCc-------cceeeeeccceeccc
Q 033396           85 SSQFDGKLNILVSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        85 ~~~~~g~id~li~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                            .+|+|||+|+....       ...+++|+.|+.+++
T Consensus        83 ------~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll  118 (340)
T PLN02653         83 ------KPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLL  118 (340)
T ss_pred             ------CCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHH
Confidence                  58999999998542       233577887776654

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.53  E-value=2.5e-13  Score=91.73  Aligned_cols=92  Identities=25%  Similarity=0.368  Sum_probs=80.9

Q ss_pred             cccCcEEEEec--CCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           10 SLKGMTALVTG--GTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        10 ~~~~~~~litG--a~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .++||+++|+|  ...+|+..+|+.|.++|+++.++..++ .+++..+++.+..+....++||+++.++++++++++.++
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~   81 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKK   81 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHh
Confidence            57899999999  468899999999999999999998876 666666666555555778999999999999999999999


Q ss_pred             cCCcccEEEecCCCCC
Q 033396           88 FDGKLNILVSSAQLPY  103 (120)
Q Consensus        88 ~~g~id~li~~ag~~~  103 (120)
                      + |.+|+|||+-++..
T Consensus        82 ~-g~lD~lVHsIaFa~   96 (259)
T COG0623          82 W-GKLDGLVHSIAFAP   96 (259)
T ss_pred             h-CcccEEEEEeccCC
Confidence            9 99999999999876

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.51  E-value=8e-14  Score=94.11  Aligned_cols=95  Identities=26%  Similarity=0.318  Sum_probs=73.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      .|+++||||+++||.+++++|+++ ++|++++|+....++.....    ..+.++.+|++|++++.++++++     +++
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~-----~~i   72 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL----PGATPFPVDLTDPEAIAAAVEQL-----GRL   72 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh----ccceEEecCCCCHHHHHHHHHhc-----CCC
Confidence            468999999999999999999999 99999999876654443322    24678899999999888887653     589


Q ss_pred             cEEEecCCCCCc-----------cceeeeeccceec
Q 033396           93 NILVSSAQLPYS-----------QRKFFVKSRGPYG  117 (120)
Q Consensus        93 d~li~~ag~~~~-----------~~~~~~n~~g~~~  117 (120)
                      |++||++|....           .+.+++|+.+++.
T Consensus        73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~  108 (227)
T PRK08219         73 DVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAE  108 (227)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHH
Confidence            999999998653           2235666666544

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.50  E-value=1.6e-13  Score=98.78  Aligned_cols=85  Identities=22%  Similarity=0.171  Sum_probs=69.5

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      +..+++++|||++|+||++++++|+++|++|++++|+..........+.. +.++.++.+|+++.+.+.+++        
T Consensus         7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~--------   77 (353)
T PLN02896          7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-GDRLRLFRADLQEEGSFDEAV--------   77 (353)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-CCeEEEEECCCCCHHHHHHHH--------
Confidence            46788999999999999999999999999999999886655444444332 456888999999998887777        


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                      ..+|+|||+|+...
T Consensus        78 ~~~d~Vih~A~~~~   91 (353)
T PLN02896         78 KGCDGVFHVAASME   91 (353)
T ss_pred             cCCCEEEECCcccc
Confidence            45899999999754

>PLN02240 UDP-glucose 4-epimerase

Probab=99.49  E-value=1.1e-13  Score=99.38  Aligned_cols=104  Identities=24%  Similarity=0.252  Sum_probs=76.1

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHH---HHHHHH-hcCCeEEEEeccCCCHHHHHHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQ---RIQEWK-SKGLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      ++.+|+++||||+|++|.+++++|+++|++|+++++.......   ....+. ..+..+.++.+|+++++++.+++++  
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~--   79 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAS--   79 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHh--
Confidence            4668899999999999999999999999999999875322111   111111 1234678889999999998888764  


Q ss_pred             hhcCCcccEEEecCCCCCc-------cceeeeeccceeccc
Q 033396           86 SQFDGKLNILVSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                          ..+|+|||+|+....       ...+++|+.++.+++
T Consensus        80 ----~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~  116 (352)
T PLN02240         80 ----TRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLL  116 (352)
T ss_pred             ----CCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHH
Confidence                368999999997542       234667777766553

>PLN02214 cinnamoyl-CoA reductase

Probab=99.49  E-value=1.2e-13  Score=99.26  Aligned_cols=101  Identities=18%  Similarity=0.089  Sum_probs=77.1

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHH-HHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQ-RIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .++++++||||+|+||.+++++|+++|++|+.++|+...... ....+.....++.++.+|+++++++.+++        
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--------   79 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAI--------   79 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHH--------
Confidence            467899999999999999999999999999999987654221 12223222345788899999999888877        


Q ss_pred             CcccEEEecCCCCCc--cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS--QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~--~~~~~~n~~g~~~~~  119 (120)
                      .++|+|||+|+....  ...+++|+.|+.+++
T Consensus        80 ~~~d~Vih~A~~~~~~~~~~~~~nv~gt~~ll  111 (342)
T PLN02214         80 DGCDGVFHTASPVTDDPEQMVEPAVNGAKFVI  111 (342)
T ss_pred             hcCCEEEEecCCCCCCHHHHHHHHHHHHHHHH
Confidence            458999999997543  455677877776654

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.48  E-value=1.6e-14  Score=101.29  Aligned_cols=98  Identities=21%  Similarity=0.299  Sum_probs=71.6

Q ss_pred             EEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhc--C--C--eEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           16 ALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSK--G--L--QVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~--~--~--~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ++||||+|+||++++++|++.+ .+++++++++..+-....++...  +  .  .+..+.+|++|.+.+.+++++     
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~-----   75 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEE-----   75 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhh-----
Confidence            6899999999999999999998 57999999999988888888532  2  2  234568899999998888854     


Q ss_pred             CCcccEEEecCCCCC-------ccceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPY-------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~-------~~~~~~~n~~g~~~~~  119 (120)
                       -++|+++|.|++-+       +.+.+++|+.|+.+++
T Consensus        76 -~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~  112 (293)
T PF02719_consen   76 -YKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVA  112 (293)
T ss_dssp             --T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHH
T ss_pred             -cCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHH
Confidence             48999999999987       3567888998887764

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.47  E-value=1.6e-13  Score=97.59  Aligned_cols=101  Identities=16%  Similarity=0.080  Sum_probs=76.0

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHH--hcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK--SKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      -++++++||||+|+||.+++++|+++|++|+++.|+....+.......  ....++.++.+|+++++++.+++       
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------   75 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAI-------   75 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHH-------
Confidence            357899999999999999999999999999988887654332222111  11346788999999999888887       


Q ss_pred             CCcccEEEecCCCCCc------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~------~~~~~~n~~g~~~~~  119 (120)
                       ..+|++||+|+....      ...+++|+.|+.+++
T Consensus        76 -~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll  111 (322)
T PLN02986         76 -EGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVL  111 (322)
T ss_pred             -hCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHH
Confidence             358999999997532      234677888877654

>PLN02583 cinnamoyl-CoA reductase

Probab=99.46  E-value=2.6e-13  Score=95.86  Aligned_cols=101  Identities=14%  Similarity=0.122  Sum_probs=75.7

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChH--HHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET--ELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      -++|+++||||+|+||++++++|+++|++|+++.|+..  ........+...+.++.++.+|++|++++.+++       
T Consensus         4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l-------   76 (297)
T PLN02583          4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDAL-------   76 (297)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHH-------
Confidence            35689999999999999999999999999999988532  222233333222446788899999998887666       


Q ss_pred             CCcccEEEecCCCCC-----ccceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPY-----SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~-----~~~~~~~n~~g~~~~~  119 (120)
                       ...|.++|.++...     +...+++|+.|+++++
T Consensus        77 -~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll  111 (297)
T PLN02583         77 -KGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVL  111 (297)
T ss_pred             -cCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHH
Confidence             45788888765543     2456788999888765

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.46  E-value=1.5e-13  Score=98.60  Aligned_cols=100  Identities=18%  Similarity=0.135  Sum_probs=73.0

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH-----HHHHHHHHHh-cCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-----LNQRIQEWKS-KGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      |+++||||+|+||++++++|++.|++|+.++|....     ++...+.+.. .+..+.++.+|++|++++.++++..   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            589999999999999999999999999999987532     2211111111 1345788999999999988888652   


Q ss_pred             cCCcccEEEecCCCCCc-------cceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                         ++|+|||+|+....       ...+++|+.|+.+++
T Consensus        78 ---~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll  113 (343)
T TIGR01472        78 ---KPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLL  113 (343)
T ss_pred             ---CCCEEEECCcccccchhhhChHHHHHHHHHHHHHHH
Confidence               58999999998542       223456766665543

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02650 dihydroflavonol-4-reductase

Probab=99.44  E-value=4e-13  Score=96.65  Aligned_cols=100  Identities=15%  Similarity=0.068  Sum_probs=76.3

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ..|+++||||+|+||++++++|+++|++|++++|+..............  ...+.++.+|+++.+.+.+++        
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--------   75 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAI--------   75 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHH--------
Confidence            4678999999999999999999999999999988765443332222111  235788899999998888777        


Q ss_pred             CcccEEEecCCCCCc------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~------~~~~~~n~~g~~~~~  119 (120)
                      ..+|+|||+|+....      ...+++|+.|+++++
T Consensus        76 ~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll  111 (351)
T PLN02650         76 RGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIM  111 (351)
T ss_pred             hCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHH
Confidence            358999999986532      246788888887764

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.44  E-value=2.6e-13  Score=96.22  Aligned_cols=99  Identities=14%  Similarity=0.117  Sum_probs=74.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh---cCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS---KGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ++|+++||||+|+||++++++|+++|++|+++.|+....... ..+..   ...++.++.+|+++++.+.+++       
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------   74 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKT-EHLLALDGAKERLHLFKANLLEEGSFDSVV-------   74 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhH-HHHHhccCCCCceEEEeccccCcchHHHHH-------
Confidence            468899999999999999999999999999888875432211 11111   1246788999999998888777       


Q ss_pred             CCcccEEEecCCCCCc------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~------~~~~~~n~~g~~~~~  119 (120)
                       .++|+|||+|+....      ...+++|+.|+.+++
T Consensus        75 -~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll  110 (322)
T PLN02662         75 -DGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVL  110 (322)
T ss_pred             -cCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHH
Confidence             458999999986431      145677888877654

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.43  E-value=4.4e-13  Score=95.94  Aligned_cols=101  Identities=16%  Similarity=0.069  Sum_probs=74.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHH--HHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRI--QEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .+.+++++||||+|+||++++++|+++|++|+++.|+........  ..+.. ..++.++.+|++|++++.+++      
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~------   78 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQE-LGDLKIFGADLTDEESFEAPI------   78 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCC-CCceEEEEcCCCChHHHHHHH------
Confidence            356889999999999999999999999999988887754332211  11211 135788899999998887776      


Q ss_pred             cCCcccEEEecCCCCCc------cceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPYS------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~------~~~~~~n~~g~~~~~  119 (120)
                        .++|+|||+|+....      ...+++|+.|+.+++
T Consensus        79 --~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll  114 (338)
T PLN00198         79 --AGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVL  114 (338)
T ss_pred             --hcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHH
Confidence              468999999986431      123467888876654

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.43  E-value=4.3e-13  Score=95.15  Aligned_cols=100  Identities=16%  Similarity=0.130  Sum_probs=82.8

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHH--HHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQ--RIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .++.+.||||+|.||+.++++|+++||+|+.+.|++...+.  .+.+++....+...+..|+.+++++++++        
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai--------   76 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAI--------   76 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHH--------
Confidence            67899999999999999999999999999999998876433  35566655667899999999999999998        


Q ss_pred             CcccEEEecCCCCCc-----c-ceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-----Q-RKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-----~-~~~~~n~~g~~~~~  119 (120)
                      .++|+|+|.|....+     + +.++..+.|+.+++
T Consensus        77 ~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL  112 (327)
T KOG1502|consen   77 DGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVL  112 (327)
T ss_pred             hCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHH
Confidence            569999999988774     1 45677777766543

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.43  E-value=5.8e-13  Score=98.86  Aligned_cols=105  Identities=17%  Similarity=0.157  Sum_probs=76.0

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChH---H----H---------HHHHHHHH-hcCCeEEEEeccC
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET---E----L---------NQRIQEWK-SKGLQVSGNACDL   71 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~---~----~---------~~~~~~~~-~~~~~~~~~~~D~   71 (120)
                      ...++++++||||+|+||++++++|+++|++|+++++...   .    .         .+....+. ..+..+.++.+|+
T Consensus        43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl  122 (442)
T PLN02572         43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDI  122 (442)
T ss_pred             ccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCC
Confidence            3478889999999999999999999999999999874211   0    0         01111111 1234578899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCcccEEEecCCCCCc----------cceeeeeccceeccc
Q 033396           72 KIRAQREKLMETVSSQFDGKLNILVSSAQLPYS----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~----------~~~~~~n~~g~~~~~  119 (120)
                      +|++.+.+++++      .++|+|||+|+....          ...+++|+.|+++++
T Consensus       123 ~d~~~v~~~l~~------~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nll  174 (442)
T PLN02572        123 CDFEFLSEAFKS------FEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVL  174 (442)
T ss_pred             CCHHHHHHHHHh------CCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHH
Confidence            999998888865      268999999976431          123578998888764

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.42  E-value=3.2e-13  Score=94.48  Aligned_cols=95  Identities=23%  Similarity=0.182  Sum_probs=77.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      +++|||||+|.||++++.+|++.|++|+++|.......+.....+     ..++.+|+.|.+.++++|++      .+||
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~-----~~f~~gDi~D~~~L~~vf~~------~~id   69 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ-----FKFYEGDLLDRALLTAVFEE------NKID   69 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc-----CceEEeccccHHHHHHHHHh------cCCC
Confidence            368999999999999999999999999999986544333332211     57889999999998888877      5899


Q ss_pred             EEEecCCCCC-------ccceeeeeccceeccc
Q 033396           94 ILVSSAQLPY-------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        94 ~li~~ag~~~-------~~~~~~~n~~g~~~~~  119 (120)
                      .|||.||...       +.++++.|+.|+..++
T Consensus        70 aViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll  102 (329)
T COG1087          70 AVVHFAASISVGESVQNPLKYYDNNVVGTLNLI  102 (329)
T ss_pred             EEEECccccccchhhhCHHHHHhhchHhHHHHH
Confidence            9999999876       4577899999888765

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.40  E-value=1.7e-12  Score=95.06  Aligned_cols=105  Identities=20%  Similarity=0.163  Sum_probs=76.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHH--HHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQ--RIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +.++++++||||+|+||++++++|+++|++|++++|+......  ...+.......+.++.+|++|++++.++++..   
T Consensus        57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~---  133 (390)
T PLN02657         57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE---  133 (390)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh---
Confidence            3567799999999999999999999999999999998654321  11112222346788999999999998888643   


Q ss_pred             cCCcccEEEecCCCCC--ccceeeeeccceecc
Q 033396           88 FDGKLNILVSSAQLPY--SQRKFFVKSRGPYGS  118 (120)
Q Consensus        88 ~~g~id~li~~ag~~~--~~~~~~~n~~g~~~~  118 (120)
                       ++++|+||||++...  ....+++|+.++.++
T Consensus       134 -~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~l  165 (390)
T PLN02657        134 -GDPVDVVVSCLASRTGGVKDSWKIDYQATKNS  165 (390)
T ss_pred             -CCCCcEEEECCccCCCCCccchhhHHHHHHHH
Confidence             127999999998643  233456666655443

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.37  E-value=2e-11  Score=80.61  Aligned_cols=86  Identities=21%  Similarity=0.179  Sum_probs=72.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   94 (120)
                      +++||||+ |+|..++++|+++|++|++++|+++..+.....+.. ...+..+.+|++|++++.++++.+.+.+ +++|+
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~-g~id~   78 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKN-GPFDL   78 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCeE
Confidence            58999998 677779999999999999999988776665554533 4578888999999999999999998888 89999


Q ss_pred             EEecCCCCC
Q 033396           95 LVSSAQLPY  103 (120)
Q Consensus        95 li~~ag~~~  103 (120)
                      +|+.+-...
T Consensus        79 lv~~vh~~~   87 (177)
T PRK08309         79 AVAWIHSSA   87 (177)
T ss_pred             EEEeccccc
Confidence            998876655

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.37  E-value=1e-12  Score=94.46  Aligned_cols=98  Identities=15%  Similarity=0.092  Sum_probs=70.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEE-EeeCChHH--HHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVH-TCSRNETE--LNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      +.++||||+|+||++++++|.++|+.++ +.++....  .... ..+. .+..+.++.+|++|.+++.+++++      .
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~------~   73 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSL-APVA-QSERFAFEKVDICDRAELARVFTE------H   73 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhh-hhcc-cCCceEEEECCCcChHHHHHHHhh------c
Confidence            4799999999999999999999998744 55554321  1111 1111 134577889999999998888864      3


Q ss_pred             cccEEEecCCCCCc-------cceeeeeccceeccc
Q 033396           91 KLNILVSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        91 ~id~li~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                      ++|+|||+||....       ...+++|+.|+++++
T Consensus        74 ~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll  109 (355)
T PRK10217         74 QPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLL  109 (355)
T ss_pred             CCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHH
Confidence            68999999998642       356778888877664

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.35  E-value=2.4e-12  Score=92.68  Aligned_cols=102  Identities=16%  Similarity=0.092  Sum_probs=75.0

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHH----h-cCCeEEEEeccCCCHHHHHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK----S-KGLQVSGNACDLKIRAQREKLMETV   84 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~~~   84 (120)
                      -++.++++||||+|.||..++++|.+.|++|+.+++.............    . ...++.++.+|+.+.+.+.+++   
T Consensus        12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~---   88 (348)
T PRK15181         12 VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKAC---   88 (348)
T ss_pred             cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh---
Confidence            4677899999999999999999999999999999885432221111111    1 1245778999999988877777   


Q ss_pred             HhhcCCcccEEEecCCCCCc-------cceeeeeccceeccc
Q 033396           85 SSQFDGKLNILVSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        85 ~~~~~g~id~li~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                           ..+|+|||.|+....       ...+++|+.|+.+++
T Consensus        89 -----~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll  125 (348)
T PRK15181         89 -----KNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNML  125 (348)
T ss_pred             -----hCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHH
Confidence                 358999999987542       234677887776653

>PLN02686 cinnamoyl-CoA reductase

Probab=99.34  E-value=6.6e-12  Score=91.20  Aligned_cols=101  Identities=12%  Similarity=0.098  Sum_probs=72.6

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc------CCeEEEEeccCCCHHHHHHHHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK------GLQVSGNACDLKIRAQREKLME   82 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~   82 (120)
                      ...++|+++||||+|+||++++++|+++|++|+++.|+......+ .++...      ...+.++.+|++|++++.++++
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~  127 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD  127 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence            357889999999999999999999999999999888876544333 222211      1357788999999998888884


Q ss_pred             HHHhhcCCcccEEEecCCCCCc-------cceeeeeccceecc
Q 033396           83 TVSSQFDGKLNILVSSAQLPYS-------QRKFFVKSRGPYGS  118 (120)
Q Consensus        83 ~~~~~~~g~id~li~~ag~~~~-------~~~~~~n~~g~~~~  118 (120)
                              .+|.+||.++....       ....++|+.++.++
T Consensus       128 --------~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~l  162 (367)
T PLN02686        128 --------GCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENV  162 (367)
T ss_pred             --------hccEEEecCeeecccccccccchhhhhhHHHHHHH
Confidence                    36777777765421       23345566655444

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.33  E-value=3.9e-12  Score=89.83  Aligned_cols=97  Identities=21%  Similarity=0.179  Sum_probs=70.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   94 (120)
                      .++||||+|+||..++++|+++|++|+++++...........+...+ .+..+.+|+++++++.++++.      +++|+
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~------~~~d~   73 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERIT-RVTFVEGDLRDRELLDRLFEE------HKIDA   73 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcccc-ceEEEECCCCCHHHHHHHHHh------CCCcE
Confidence            37899999999999999999999999888764332222222222212 577889999999998888764      57999


Q ss_pred             EEecCCCCCc-------cceeeeeccceecc
Q 033396           95 LVSSAQLPYS-------QRKFFVKSRGPYGS  118 (120)
Q Consensus        95 li~~ag~~~~-------~~~~~~n~~g~~~~  118 (120)
                      +||++|....       ...++.|+.++.++
T Consensus        74 vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l  104 (328)
T TIGR01179        74 VIHFAGLIAVGESVQDPLKYYRNNVVNTLNL  104 (328)
T ss_pred             EEECccccCcchhhcCchhhhhhhHHHHHHH
Confidence            9999997532       23456677666554

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.32  E-value=6.6e-12  Score=90.21  Aligned_cols=97  Identities=19%  Similarity=0.153  Sum_probs=71.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCE-EEEeeCCh--HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNE--TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~-v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .++||||+|+||.+++++|++.|.. |+.+++..  ...+.. ..+. .+..+.++.+|++|.+++.+++++      .+
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~------~~   73 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESL-ADVS-DSERYVFEHADICDRAELDRIFAQ------HQ   73 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHH-Hhcc-cCCceEEEEecCCCHHHHHHHHHh------cC
Confidence            5899999999999999999999976 55555532  112111 1111 134577889999999999888865      36


Q ss_pred             ccEEEecCCCCC-------ccceeeeeccceeccc
Q 033396           92 LNILVSSAQLPY-------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        92 id~li~~ag~~~-------~~~~~~~n~~g~~~~~  119 (120)
                      +|+|||+|+...       +...+++|+.|+.+++
T Consensus        74 ~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll  108 (352)
T PRK10084         74 PDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLL  108 (352)
T ss_pred             CCEEEECCcccCCcchhcCchhhhhhhhHHHHHHH
Confidence            999999999754       2466889998887764

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.32  E-value=4.8e-12  Score=90.35  Aligned_cols=98  Identities=16%  Similarity=0.114  Sum_probs=69.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh-cCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      +++||||+|+||.+++++|+++|++|+++++...........+.. .+.++.++.+|++|++++.++++.      .++|
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------~~~d   75 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD------HAID   75 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc------CCCC
Confidence            589999999999999999999999999887643222222222222 234567788999999988887753      4699


Q ss_pred             EEEecCCCCCc-------cceeeeeccceecc
Q 033396           94 ILVSSAQLPYS-------QRKFFVKSRGPYGS  118 (120)
Q Consensus        94 ~li~~ag~~~~-------~~~~~~n~~g~~~~  118 (120)
                      +|||+|+....       ...+++|+.++.++
T Consensus        76 ~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l  107 (338)
T PRK10675         76 TVIHFAGLKAVGESVQKPLEYYDNNVNGTLRL  107 (338)
T ss_pred             EEEECCccccccchhhCHHHHHHHHHHHHHHH
Confidence            99999987542       23345555555443

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.30  E-value=1.9e-11  Score=86.38  Aligned_cols=101  Identities=25%  Similarity=0.229  Sum_probs=79.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH---HHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE---LNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++.++||||+|.||.+.+.+|.+.|+.|+++|.-...   .....+++...+..+.++..|+.|.+.+++++++.     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            5789999999999999999999999999999874322   22223333333688999999999999999998773     


Q ss_pred             CcccEEEecCCCCC-------ccceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPY-------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~-------~~~~~~~n~~g~~~~~  119 (120)
                       ++|.|+|-|+.-.       +...+..|+.|+.+++
T Consensus        77 -~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlL  112 (343)
T KOG1371|consen   77 -KFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLL  112 (343)
T ss_pred             -CCceEEeehhhhccchhhhCchhheehhhhhHHHHH
Confidence             6999999998866       3456788888877653

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.29  E-value=2.8e-11  Score=83.50  Aligned_cols=97  Identities=18%  Similarity=0.192  Sum_probs=69.3

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCH-HHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR-AQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   89 (120)
                      ..+++++||||+|+||+.++++|++.|++|+.+.|+.........    .+..+.++.+|+++. .++.+.+       +
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~l~~~~-------~   83 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----QDPSLQIVRADVTEGSDKLVEAI-------G   83 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----cCCceEEEEeeCCCCHHHHHHHh-------h
Confidence            567899999999999999999999999999999998765432221    134578889999984 3332222       1


Q ss_pred             CcccEEEecCCCCCc---cceeeeeccceecc
Q 033396           90 GKLNILVSSAQLPYS---QRKFFVKSRGPYGS  118 (120)
Q Consensus        90 g~id~li~~ag~~~~---~~~~~~n~~g~~~~  118 (120)
                      .++|+||+++|....   ...+++|..++.++
T Consensus        84 ~~~d~vi~~~g~~~~~~~~~~~~~n~~~~~~l  115 (251)
T PLN00141         84 DDSDAVICATGFRRSFDPFAPWKVDNFGTVNL  115 (251)
T ss_pred             cCCCEEEECCCCCcCCCCCCceeeehHHHHHH
Confidence            268999999987532   23356676665544

>PLN02427 UDP-apiose/xylose synthase

Probab=99.28  E-value=8e-12  Score=91.06  Aligned_cols=101  Identities=12%  Similarity=0.088  Sum_probs=72.1

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHH-hcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQRIQEWK-SKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~-g~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      ..+.++++||||+|.||+.++++|+++ |++|+.++|+............ ....++.++.+|++|.+.+.+++      
T Consensus        11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~------   84 (386)
T PLN02427         11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLI------   84 (386)
T ss_pred             cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHh------
Confidence            356678999999999999999999998 5899999987644332211100 01236889999999998888777      


Q ss_pred             cCCcccEEEecCCCCCc-------cceeeeeccceecc
Q 033396           88 FDGKLNILVSSAQLPYS-------QRKFFVKSRGPYGS  118 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-------~~~~~~n~~g~~~~  118 (120)
                        ..+|+|||+|+....       ...+..|+.++.++
T Consensus        85 --~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~l  120 (386)
T PLN02427         85 --KMADLTINLAAICTPADYNTRPLDTIYSNFIDALPV  120 (386)
T ss_pred             --hcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHH
Confidence              347999999987542       12345666665543

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.23  E-value=1.9e-11  Score=86.06  Aligned_cols=97  Identities=18%  Similarity=0.077  Sum_probs=68.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC--CEEEEeeCChH-HHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           15 TALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNET-ELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      +++||||+|+||.+++++|++.|  .+|+++++... ...+....+.. ...+.++.+|+++++++.++++.      -+
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~------~~   73 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED-NPRYRFVKGDIGDRELVSRLFTE------HQ   73 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc-CCCcEEEEcCCcCHHHHHHHHhh------cC
Confidence            37999999999999999999987  78888876421 11111122211 23577889999999998888754      25


Q ss_pred             ccEEEecCCCCCc-------cceeeeeccceecc
Q 033396           92 LNILVSSAQLPYS-------QRKFFVKSRGPYGS  118 (120)
Q Consensus        92 id~li~~ag~~~~-------~~~~~~n~~g~~~~  118 (120)
                      +|+|||+++....       ...+++|+.++.++
T Consensus        74 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l  107 (317)
T TIGR01181        74 PDAVVHFAAESHVDRSISGPAAFIETNVVGTYTL  107 (317)
T ss_pred             CCEEEEcccccCchhhhhCHHHHHHHHHHHHHHH
Confidence            8999999997642       23456676665544

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.21  E-value=1.3e-11  Score=86.88  Aligned_cols=92  Identities=17%  Similarity=0.174  Sum_probs=70.5

Q ss_pred             EEecCCCchHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 033396           17 LVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        17 litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   94 (120)
                      |||||+|.||++++++|+++|  ++|.++++.......  ..+... ....++.+|++|++++.+++        .+.|+
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~~-~~~~~~~~Di~d~~~l~~a~--------~g~d~   69 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQKS-GVKEYIQGDITDPESLEEAL--------EGVDV   69 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhcc-cceeEEEeccccHHHHHHHh--------cCCce
Confidence            689999999999999999999  789998887644221  111111 22238899999999999988        56899


Q ss_pred             EEecCCCCCc------cceeeeeccceeccc
Q 033396           95 LVSSAQLPYS------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        95 li~~ag~~~~------~~~~~~n~~g~~~~~  119 (120)
                      |||+|+....      +..+++|+.|+-+++
T Consensus        70 V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl  100 (280)
T PF01073_consen   70 VFHTAAPVPPWGDYPPEEYYKVNVDGTRNVL  100 (280)
T ss_pred             EEEeCccccccCcccHHHHHHHHHHHHHHHH
Confidence            9999987543      346889999987765

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.21  E-value=1.3e-11  Score=87.37  Aligned_cols=91  Identities=26%  Similarity=0.235  Sum_probs=69.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      ++++|||++|+||+.++++|+++|++|+.++|++.....    +.  ...+.++.+|+++++++.+++        ..+|
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~--~~~~~~~~~D~~~~~~l~~~~--------~~~d   66 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN----LE--GLDVEIVEGDLRDPASLRKAV--------AGCR   66 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc----cc--cCCceEEEeeCCCHHHHHHHH--------hCCC
Confidence            368999999999999999999999999999997654321    11  224778899999998887777        4689


Q ss_pred             EEEecCCCCC-----ccceeeeeccceecc
Q 033396           94 ILVSSAQLPY-----SQRKFFVKSRGPYGS  118 (120)
Q Consensus        94 ~li~~ag~~~-----~~~~~~~n~~g~~~~  118 (120)
                      ++||+++...     +...+++|+.++.++
T Consensus        67 ~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l   96 (328)
T TIGR03466        67 ALFHVAADYRLWAPDPEEMYAANVEGTRNL   96 (328)
T ss_pred             EEEEeceecccCCCCHHHHHHHHHHHHHHH
Confidence            9999997643     234456676666544

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.20  E-value=9.8e-11  Score=83.37  Aligned_cols=89  Identities=17%  Similarity=0.120  Sum_probs=66.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   94 (120)
                      +++||||+|.+|++++++|.++|++|+.+.|+......    +..  ..+.++.+|++|++++.+++        .++|+
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~----l~~--~~v~~v~~Dl~d~~~l~~al--------~g~d~   67 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF----LKE--WGAELVYGDLSLPETLPPSF--------KGVTA   67 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh----Hhh--cCCEEEECCCCCHHHHHHHH--------CCCCE
Confidence            59999999999999999999999999999998654321    111  24678899999999888777        46899


Q ss_pred             EEecCCCCCc--cceeeeeccceec
Q 033396           95 LVSSAQLPYS--QRKFFVKSRGPYG  117 (120)
Q Consensus        95 li~~ag~~~~--~~~~~~n~~g~~~  117 (120)
                      |||+++....  ....++|+.++.+
T Consensus        68 Vi~~~~~~~~~~~~~~~~~~~~~~~   92 (317)
T CHL00194         68 IIDASTSRPSDLYNAKQIDWDGKLA   92 (317)
T ss_pred             EEECCCCCCCCccchhhhhHHHHHH
Confidence            9998865432  2344556555443

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.16  E-value=6.1e-10  Score=73.11  Aligned_cols=72  Identities=21%  Similarity=0.160  Sum_probs=64.0

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccEE
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNIL   95 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~l   95 (120)
                      ++|+||+|.+|..++++|++.|++|+++.|++.+.++        ...+.++.+|+.|++++.+++        .+.|.+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--------~~~~~~~~~d~~d~~~~~~al--------~~~d~v   64 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--------SPGVEIIQGDLFDPDSVKAAL--------KGADAV   64 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--------CTTEEEEESCTTCHHHHHHHH--------TTSSEE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--------ccccccceeeehhhhhhhhhh--------hhcchh
Confidence            6899999999999999999999999999999887654        567889999999998888888        679999


Q ss_pred             EecCCCCC
Q 033396           96 VSSAQLPY  103 (120)
Q Consensus        96 i~~ag~~~  103 (120)
                      |+++|...
T Consensus        65 i~~~~~~~   72 (183)
T PF13460_consen   65 IHAAGPPP   72 (183)
T ss_dssp             EECCHSTT
T ss_pred             hhhhhhhc
Confidence            99998654

...

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.15  E-value=6e-11  Score=80.39  Aligned_cols=76  Identities=29%  Similarity=0.318  Sum_probs=62.5

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccEE
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNIL   95 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~l   95 (120)
                      ++||||+|.||.+++++|.++|..|+.+.+............     ++.++.+|+.+.+.++++++..      ++|.+
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~dl~~~~~~~~~~~~~------~~d~v   69 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-----NVEFVIGDLTDKEQLEKLLEKA------NIDVV   69 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-----TEEEEESETTSHHHHHHHHHHH------TESEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-----eEEEEEeecccccccccccccc------CceEE
Confidence            689999999999999999999999887777654432222211     6889999999999999999773      68999


Q ss_pred             EecCCCC
Q 033396           96 VSSAQLP  102 (120)
Q Consensus        96 i~~ag~~  102 (120)
                      ||+|+..
T Consensus        70 i~~a~~~   76 (236)
T PF01370_consen   70 IHLAAFS   76 (236)
T ss_dssp             EEEBSSS
T ss_pred             EEeeccc
Confidence            9999986

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.15  E-value=1.8e-10  Score=80.69  Aligned_cols=99  Identities=17%  Similarity=0.105  Sum_probs=75.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCC--EEEEeeCCh-HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNE-TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~--~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      +.+|||||+|+||.++++.+.+...  +|+.+|.-. ..-.+....+ ....+..++++|+.|.+.+.+++.+      -
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~-~~~~~~~fv~~DI~D~~~v~~~~~~------~   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADV-EDSPRYRFVQGDICDRELVDRLFKE------Y   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhh-hcCCCceEEeccccCHHHHHHHHHh------c
Confidence            4689999999999999999999774  467666532 2211222222 1245789999999999998888865      3


Q ss_pred             cccEEEecCCCCC-------ccceeeeeccceeccc
Q 033396           91 KLNILVSSAQLPY-------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        91 ~id~li~~ag~~~-------~~~~~~~n~~g~~~~~  119 (120)
                      .+|+++|-|+-.+       +...+++|+.|+++++
T Consensus        74 ~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LL  109 (340)
T COG1088          74 QPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLL  109 (340)
T ss_pred             CCCeEEEechhccccccccChhhhhhcchHHHHHHH
Confidence            7999999998766       4677899999998875

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.14  E-value=1.3e-10  Score=84.50  Aligned_cols=96  Identities=13%  Similarity=0.107  Sum_probs=68.5

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      |.-++++++|||++|.||++++++|.++|++|+.++|......      ......+.++.+|+++.+.+.+++       
T Consensus        17 ~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~-------   83 (370)
T PLN02695         17 WPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM------SEDMFCHEFHLVDLRVMENCLKVT-------   83 (370)
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc------ccccccceEEECCCCCHHHHHHHH-------
Confidence            4457889999999999999999999999999999998643210      011112456789999988776665       


Q ss_pred             CCcccEEEecCCCCCc--------cceeeeeccceecc
Q 033396           89 DGKLNILVSSAQLPYS--------QRKFFVKSRGPYGS  118 (120)
Q Consensus        89 ~g~id~li~~ag~~~~--------~~~~~~n~~g~~~~  118 (120)
                       .++|+|||+|+....        ...+..|+.++.++
T Consensus        84 -~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nl  120 (370)
T PLN02695         84 -KGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNM  120 (370)
T ss_pred             -hCCCEEEEcccccCCccccccCchhhHHHHHHHHHHH
Confidence             358999999976531        22344566665544

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.13  E-value=1.4e-10  Score=89.96  Aligned_cols=101  Identities=12%  Similarity=-0.016  Sum_probs=72.1

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHC--CCEEEEeeCCh--HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAF--GAIVHTCSRNE--TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~--g~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      .++.++++||||+|+||++++++|++.  +++|+.+++..  ........ . .....+.++.+|++|.+.+.+++..  
T Consensus         3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~-~-~~~~~v~~~~~Dl~d~~~~~~~~~~--   78 (668)
T PLN02260          3 TYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNP-S-KSSPNFKFVKGDIASADLVNYLLIT--   78 (668)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhh-c-ccCCCeEEEECCCCChHHHHHHHhh--
Confidence            356789999999999999999999997  57898888753  22221111 0 1134678899999998877666533  


Q ss_pred             hhcCCcccEEEecCCCCCc-------cceeeeeccceecc
Q 033396           86 SQFDGKLNILVSSAQLPYS-------QRKFFVKSRGPYGS  118 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~~-------~~~~~~n~~g~~~~  118 (120)
                          .++|+|||+|+....       ...+++|+.|+.++
T Consensus        79 ----~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~l  114 (668)
T PLN02260         79 ----EGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVL  114 (668)
T ss_pred             ----cCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHH
Confidence                479999999998653       23456777666554

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.12  E-value=1.7e-10  Score=78.98  Aligned_cols=77  Identities=16%  Similarity=0.184  Sum_probs=60.2

Q ss_pred             EEEEec-CCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           15 TALVTG-GTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        15 ~~litG-a~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      +=.||. ++||||+++|++|+++|++|+++++.. .       +....    ...+|+++.+++.++++++.+.+ +++|
T Consensus        16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~-~-------l~~~~----~~~~Dv~d~~s~~~l~~~v~~~~-g~iD   82 (227)
T TIGR02114        16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKR-A-------LKPEP----HPNLSIREIETTKDLLITLKELV-QEHD   82 (227)
T ss_pred             ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChh-h-------ccccc----CCcceeecHHHHHHHHHHHHHHc-CCCC
Confidence            344565 478899999999999999999987631 1       11101    13579999999999999999999 8999


Q ss_pred             EEEecCCCCCc
Q 033396           94 ILVSSAQLPYS  104 (120)
Q Consensus        94 ~li~~ag~~~~  104 (120)
                      ++|||||+..+
T Consensus        83 iLVnnAgv~d~   93 (227)
T TIGR02114        83 ILIHSMAVSDY   93 (227)
T ss_pred             EEEECCEeccc
Confidence            99999998664

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=99.12  E-value=8.3e-10  Score=78.04  Aligned_cols=84  Identities=20%  Similarity=0.205  Sum_probs=65.8

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCE-EEEeeCCh---HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNE---TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~-v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      .+++|+++|+|+ ||+|++++..|++.|++ |++++|+.   ++.+++.+++...+..+....+|+++.+++...+    
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~----  197 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEI----  197 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhh----
Confidence            467899999999 69999999999999986 99999986   5666777777655555566677888776666554    


Q ss_pred             hhcCCcccEEEecCCCC
Q 033396           86 SQFDGKLNILVSSAQLP  102 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~  102 (120)
                          ...|+||||..+.
T Consensus       198 ----~~~DilINaTp~G  210 (289)
T PRK12548        198 ----ASSDILVNATLVG  210 (289)
T ss_pred             ----ccCCEEEEeCCCC
Confidence                4579999998543

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.11  E-value=2.4e-10  Score=82.13  Aligned_cols=92  Identities=12%  Similarity=0.044  Sum_probs=65.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCC-CHHHHHHHHHHHHhhcCCc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLK-IRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~g~   91 (120)
                      ++++||||+|.||+.++++|++. |++|+.++|+......    +.. ...+.++.+|++ +.+.+.+++        .+
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~----~~~-~~~~~~~~~Dl~~~~~~~~~~~--------~~   68 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGD----LVN-HPRMHFFEGDITINKEWIEYHV--------KK   68 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----hcc-CCCeEEEeCCCCCCHHHHHHHH--------cC
Confidence            36999999999999999999986 6999999986543221    111 235788899997 556555554        45


Q ss_pred             ccEEEecCCCCCc-------cceeeeeccceecc
Q 033396           92 LNILVSSAQLPYS-------QRKFFVKSRGPYGS  118 (120)
Q Consensus        92 id~li~~ag~~~~-------~~~~~~n~~g~~~~  118 (120)
                      +|+|||+|+....       ...+++|+.|+.++
T Consensus        69 ~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~l  102 (347)
T PRK11908         69 CDVILPLVAIATPATYVKQPLRVFELDFEANLPI  102 (347)
T ss_pred             CCEEEECcccCChHHhhcCcHHHHHHHHHHHHHH
Confidence            8999999987542       23456677666554

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.11  E-value=5e-12  Score=85.39  Aligned_cols=104  Identities=16%  Similarity=0.095  Sum_probs=73.9

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHH-hcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK-SKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .++++++||++.|||..++..+...+.......++...++  .+.+. ..+........|++....+.++++..+... +
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~-g   81 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKG-G   81 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcC-C
Confidence            4778999999999999999888887755433333322221  11111 224444555668888777888888888887 8


Q ss_pred             cccEEEecCCCCC--------------ccceeeeeccceecc
Q 033396           91 KLNILVSSAQLPY--------------SQRKFFVKSRGPYGS  118 (120)
Q Consensus        91 ~id~li~~ag~~~--------------~~~~~~~n~~g~~~~  118 (120)
                      +.|++|||||...              |++.+++|++++..+
T Consensus        82 kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL  123 (253)
T KOG1204|consen   82 KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSL  123 (253)
T ss_pred             ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhh
Confidence            9999999999987              367789999887654

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.10  E-value=1.6e-10  Score=89.63  Aligned_cols=95  Identities=14%  Similarity=0.065  Sum_probs=70.0

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHH-HHHHHHHHHhhc
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQ-REKLMETVSSQF   88 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~   88 (120)
                      .++++++||||+|.||++++++|+++ |++|+.++|........    . ....+.++.+|++|... +.+++       
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~----~-~~~~~~~~~gDl~d~~~~l~~~l-------  380 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF----L-GHPRFHFVEGDISIHSEWIEYHI-------  380 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh----c-CCCceEEEeccccCcHHHHHHHh-------
Confidence            57889999999999999999999985 69999999876432211    1 12357788999998654 34444       


Q ss_pred             CCcccEEEecCCCCCc-------cceeeeeccceecc
Q 033396           89 DGKLNILVSSAQLPYS-------QRKFFVKSRGPYGS  118 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-------~~~~~~n~~g~~~~  118 (120)
                       ..+|+|||+|+....       ...+++|+.++.++
T Consensus       381 -~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~l  416 (660)
T PRK08125        381 -KKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKI  416 (660)
T ss_pred             -cCCCEEEECccccCchhhccCHHHHHHhhHHHHHHH
Confidence             358999999987653       23456777776654

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.09  E-value=3.1e-10  Score=81.23  Aligned_cols=96  Identities=23%  Similarity=0.189  Sum_probs=65.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC--CEEEEeeCChHH---HHHHHHHHHhcC--------CeEEEEeccCCCHH------
Q 033396           15 TALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETE---LNQRIQEWKSKG--------LQVSGNACDLKIRA------   75 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~~~---~~~~~~~~~~~~--------~~~~~~~~D~~~~~------   75 (120)
                      +++||||+|+||.+++++|+++|  ++|+++.|+...   .+.+.+.+....        .++.++.+|++++.      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            47999999999999999999998  779999887542   222222222111        46889999998753      


Q ss_pred             HHHHHHHHHHhhcCCcccEEEecCCCCCc----cceeeeeccceecc
Q 033396           76 QREKLMETVSSQFDGKLNILVSSAQLPYS----QRKFFVKSRGPYGS  118 (120)
Q Consensus        76 ~~~~~~~~~~~~~~g~id~li~~ag~~~~----~~~~~~n~~g~~~~  118 (120)
                      ....+.        ..+|++|||++...+    ....++|+.|+.++
T Consensus        81 ~~~~~~--------~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~l  119 (367)
T TIGR01746        81 EWERLA--------ENVDTIVHNGALVNWVYPYSELRAANVLGTREV  119 (367)
T ss_pred             HHHHHH--------hhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHH
Confidence            222222        569999999997653    23345666665544

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=99.07  E-value=9.9e-10  Score=80.69  Aligned_cols=80  Identities=21%  Similarity=0.255  Sum_probs=62.3

Q ss_pred             cccCcEEEEecC----------------CCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCC
Q 033396           10 SLKGMTALVTGG----------------TKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKI   73 (120)
Q Consensus        10 ~~~~~~~litGa----------------~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   73 (120)
                      ++++|+++||||                +|.+|.++|++|+++|++|++++++.. +.       . ..  ....+|+++
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-------~-~~--~~~~~dv~~  253 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-------T-PA--GVKRIDVES  253 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-------C-CC--CcEEEccCC
Confidence            478999999999                555999999999999999999987652 11       0 11  134579999


Q ss_pred             HHHHHHHHHHHHhhcCCcccEEEecCCCCCc
Q 033396           74 RAQREKLMETVSSQFDGKLNILVSSAQLPYS  104 (120)
Q Consensus        74 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  104 (120)
                      .+++.+.+.   +.+ +++|++|||||+..+
T Consensus       254 ~~~~~~~v~---~~~-~~~DilI~~Aav~d~  280 (399)
T PRK05579        254 AQEMLDAVL---AAL-PQADIFIMAAAVADY  280 (399)
T ss_pred             HHHHHHHHH---Hhc-CCCCEEEEccccccc
Confidence            888766665   446 789999999999775

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.07  E-value=1.1e-10  Score=82.54  Aligned_cols=81  Identities=14%  Similarity=0.158  Sum_probs=62.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   94 (120)
                      ++|||||+|.||++++++|.+.| +|+.++|...                 .+..|++|++.+.++++.      -++|+
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------------~~~~Dl~d~~~~~~~~~~------~~~D~   57 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------------DYCGDFSNPEGVAETVRK------IRPDV   57 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------------cccCCCCCHHHHHHHHHh------cCCCE
Confidence            59999999999999999999999 7888887521                 235799999988888764      26899


Q ss_pred             EEecCCCCCc-------cceeeeeccceeccc
Q 033396           95 LVSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        95 li~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                      |||+|+....       ...+.+|+.|+.+++
T Consensus        58 Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~   89 (299)
T PRK09987         58 IVNAAAHTAVDKAESEPEFAQLLNATSVEAIA   89 (299)
T ss_pred             EEECCccCCcchhhcCHHHHHHHHHHHHHHHH
Confidence            9999998653       223467777766553

>PRK05865 hypothetical protein; Provisional

Probab=99.04  E-value=5.5e-10  Score=88.31  Aligned_cols=85  Identities=18%  Similarity=0.194  Sum_probs=68.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   94 (120)
                      .++||||+|+||.+++++|+++|++|+.++|+....      +   ...+.++.+|+++.+++.+++        ..+|+
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~---~~~v~~v~gDL~D~~~l~~al--------~~vD~   64 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W---PSSADFIAADIRDATAVESAM--------TGADV   64 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c---ccCceEEEeeCCCHHHHHHHH--------hCCCE
Confidence            589999999999999999999999999999875321      1   124678899999999888777        35899


Q ss_pred             EEecCCCCCccceeeeeccceecc
Q 033396           95 LVSSAQLPYSQRKFFVKSRGPYGS  118 (120)
Q Consensus        95 li~~ag~~~~~~~~~~n~~g~~~~  118 (120)
                      |||+|+....  .+++|+.++.++
T Consensus        65 VVHlAa~~~~--~~~vNv~GT~nL   86 (854)
T PRK05865         65 VAHCAWVRGR--NDHINIDGTANV   86 (854)
T ss_pred             EEECCCcccc--hHHHHHHHHHHH
Confidence            9999987543  457777776654

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.02  E-value=2.9e-10  Score=79.43  Aligned_cols=76  Identities=22%  Similarity=0.343  Sum_probs=61.1

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccEE
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNIL   95 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~l   95 (120)
                      ++|||++|+||.+++++|.+.|++|+.++|.                     .+|+.+++.+.++++.      ..+|++
T Consensus         2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------------~~d~~~~~~~~~~~~~------~~~d~v   54 (287)
T TIGR01214         2 ILITGANGQLGRELVQQLSPEGRVVVALTSS---------------------QLDLTDPEALERLLRA------IRPDAV   54 (287)
T ss_pred             EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------------ccCCCCHHHHHHHHHh------CCCCEE
Confidence            7999999999999999999999999999874                     3799999988888754      368999


Q ss_pred             EecCCCCCc-------cceeeeeccceecc
Q 033396           96 VSSAQLPYS-------QRKFFVKSRGPYGS  118 (120)
Q Consensus        96 i~~ag~~~~-------~~~~~~n~~g~~~~  118 (120)
                      ||+++....       ...+++|+.++.++
T Consensus        55 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l   84 (287)
T TIGR01214        55 VNTAAYTDVDGAESDPEKAFAVNALAPQNL   84 (287)
T ss_pred             EECCccccccccccCHHHHHHHHHHHHHHH
Confidence            999997542       22456666665544

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=98.96  E-value=4.1e-10  Score=79.60  Aligned_cols=93  Identities=15%  Similarity=0.152  Sum_probs=58.8

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHh--hcCCccc
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSS--QFDGKLN   93 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~~g~id   93 (120)
                      ++||||+|.||++++++|++.|++++++.++....... ..         ...+|+.|..+.+.+++++.+  .+ +++|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~~---------~~~~~~~d~~~~~~~~~~~~~~~~~-~~~d   70 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-VN---------LVDLDIADYMDKEDFLAQIMAGDDF-GDIE   70 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-Hh---------hhhhhhhhhhhHHHHHHHHhccccc-CCcc
Confidence            78999999999999999999998655554432221110 01         123466665555555555432  23 4799


Q ss_pred             EEEecCCCCCc-----cceeeeeccceeccc
Q 033396           94 ILVSSAQLPYS-----QRKFFVKSRGPYGSI  119 (120)
Q Consensus        94 ~li~~ag~~~~-----~~~~~~n~~g~~~~~  119 (120)
                      +|||+|+....     ...++.|+.++.+++
T Consensus        71 ~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll  101 (308)
T PRK11150         71 AIFHEGACSSTTEWDGKYMMDNNYQYSKELL  101 (308)
T ss_pred             EEEECceecCCcCCChHHHHHHHHHHHHHHH
Confidence            99999986442     124566777665543

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=98.95  E-value=8.3e-10  Score=76.24  Aligned_cols=98  Identities=15%  Similarity=0.128  Sum_probs=58.7

Q ss_pred             EecCCCchHHHHHHHHHHCCC--EEEEeeCChH--H-HHHHHHHHH----------hcCCeEEEEeccCCCHHH-H-HHH
Q 033396           18 VTGGTKGIGYAVVEELAAFGA--IVHTCSRNET--E-LNQRIQEWK----------SKGLQVSGNACDLKIRAQ-R-EKL   80 (120)
Q Consensus        18 itGa~~~ig~~~a~~l~~~g~--~v~~~~~~~~--~-~~~~~~~~~----------~~~~~~~~~~~D~~~~~~-~-~~~   80 (120)
                      +|||+|.||..+.++|++++.  +|+++.|...  . .+.+.+.+.          ....++.++.+|++++.- + ...
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999886  8999988652  2 233322222          126789999999999751 1 111


Q ss_pred             HHHHHhhcCCcccEEEecCCCCCc----cceeeeeccceeccc
Q 033396           81 METVSSQFDGKLNILVSSAQLPYS----QRKFFVKSRGPYGSI  119 (120)
Q Consensus        81 ~~~~~~~~~g~id~li~~ag~~~~----~~~~~~n~~g~~~~~  119 (120)
                      +++..    ..+|++||||+...+    ....++|+.|+.+++
T Consensus        81 ~~~L~----~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll  119 (249)
T PF07993_consen   81 YQELA----EEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLL  119 (249)
T ss_dssp             HHHHH----HH--EEEE--SS-SBS-S--EEHHHHHHHHHHHH
T ss_pred             hhccc----cccceeeecchhhhhcccchhhhhhHHHHHHHHH
Confidence            22221    358999999999875    345677888877654

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=98.95  E-value=2.6e-09  Score=77.22  Aligned_cols=99  Identities=20%  Similarity=0.183  Sum_probs=73.9

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      +..+++||||+|.+|++++.+|.+.+  .++.++|..+....-..+........+.++.+|+.+..++.+++        
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~--------   74 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAF--------   74 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhc--------
Confidence            56789999999999999999999988  78999988764211111212224678899999999999888888        


Q ss_pred             CcccEEEecCCCCCc-------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                      .+. .++|+|....+       +..+++|+.|+-+++
T Consensus        75 ~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi  110 (361)
T KOG1430|consen   75 QGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVI  110 (361)
T ss_pred             cCc-eEEEeccccCccccccchhhheeecchhHHHHH
Confidence            455 66777665543       566899999976543

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.94  E-value=2.5e-08  Score=66.58  Aligned_cols=84  Identities=24%  Similarity=0.275  Sum_probs=66.5

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc-CCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ++++++++|.|++|++|+.+++.|++.|++|++++|+.+..++..+.+... +.  ....+|..+.+++.+.+       
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~--~~~~~~~~~~~~~~~~~-------   95 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGE--GVGAVETSDDAARAAAI-------   95 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCC--cEEEeeCCCHHHHHHHH-------
Confidence            578899999999999999999999999999999999988877777766532 33  34456788877776666       


Q ss_pred             CCcccEEEecCCCCC
Q 033396           89 DGKLNILVSSAQLPY  103 (120)
Q Consensus        89 ~g~id~li~~ag~~~  103 (120)
                       ...|++|++.....
T Consensus        96 -~~~diVi~at~~g~  109 (194)
T cd01078          96 -KGADVVFAAGAAGV  109 (194)
T ss_pred             -hcCCEEEECCCCCc
Confidence             35788888776544

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.93  E-value=8.9e-10  Score=77.54  Aligned_cols=89  Identities=26%  Similarity=0.235  Sum_probs=67.7

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc-cE
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL-NI   94 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i-d~   94 (120)
                      ++|||++|.||.+++++|.++|+.|+.++|.........       ..+.++.+|+++.+....+++        .. |.
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~--------~~~d~   67 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-------SGVEFVVLDLTDRDLVDELAK--------GVPDA   67 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-------cccceeeecccchHHHHHHHh--------cCCCE
Confidence            899999999999999999999999999999765432111       356788889998855554443        23 99


Q ss_pred             EEecCCCCCcc--------ceeeeeccceeccc
Q 033396           95 LVSSAQLPYSQ--------RKFFVKSRGPYGSI  119 (120)
Q Consensus        95 li~~ag~~~~~--------~~~~~n~~g~~~~~  119 (120)
                      +||+++.....        ..+.+|+.|+.+++
T Consensus        68 vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll  100 (314)
T COG0451          68 VIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLL  100 (314)
T ss_pred             EEEccccCchhhhhhhCHHHHHHHHHHHHHHHH
Confidence            99999998631        15678888876653

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=98.92  E-value=4.5e-10  Score=79.21  Aligned_cols=77  Identities=22%  Similarity=0.281  Sum_probs=57.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   94 (120)
                      .++|||++|.||.++.+.|.++|..|+.++|.                     .+|++|.+.+.+++++.      ++|+
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------------~~dl~d~~~~~~~~~~~------~pd~   54 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS---------------------DLDLTDPEAVAKLLEAF------KPDV   54 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------------CS-TTSHHHHHHHHHHH--------SE
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------------hcCCCCHHHHHHHHHHh------CCCe
Confidence            58999999999999999999999999988776                     57999999998888763      6899


Q ss_pred             EEecCCCCCc-------cceeeeeccceecc
Q 033396           95 LVSSAQLPYS-------QRKFFVKSRGPYGS  118 (120)
Q Consensus        95 li~~ag~~~~-------~~~~~~n~~g~~~~  118 (120)
                      |||+|++...       ...+.+|+.++.++
T Consensus        55 Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~l   85 (286)
T PF04321_consen   55 VINCAAYTNVDACEKNPEEAYAINVDATKNL   85 (286)
T ss_dssp             EEE------HHHHHHSHHHHHHHHTHHHHHH
T ss_pred             EeccceeecHHhhhhChhhhHHHhhHHHHHH
Confidence            9999999763       35567777766554

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=98.91  E-value=8.4e-10  Score=75.72  Aligned_cols=77  Identities=19%  Similarity=0.131  Sum_probs=61.8

Q ss_pred             HHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccEEEecCCCCC---cc
Q 033396           29 VVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSAQLPY---SQ  105 (120)
Q Consensus        29 ~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~---~~  105 (120)
                      ++++|+++|++|++++|+....+     +      ..++.+|+++.++++++++++.    +++|+||||||+..   +.
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~------~~~~~~Dl~~~~~v~~~~~~~~----~~iD~li~nAG~~~~~~~~   65 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-----L------DGFIQADLGDPASIDAAVAALP----GRIDALFNIAGVPGTAPVE   65 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-----h------hHhhcccCCCHHHHHHHHHHhc----CCCeEEEECCCCCCCCCHH
Confidence            47899999999999999875532     1      2356899999999999987762    57999999999864   46


Q ss_pred             ceeeeeccceecccC
Q 033396          106 RKFFVKSRGPYGSIH  120 (120)
Q Consensus       106 ~~~~~n~~g~~~~~~  120 (120)
                      +.+++|+.+++++++
T Consensus        66 ~~~~vN~~~~~~l~~   80 (241)
T PRK12428         66 LVARVNFLGLRHLTE   80 (241)
T ss_pred             HhhhhchHHHHHHHH
Confidence            678999999987753

>PLN02996 fatty acyl-CoA reductase

Probab=98.90  E-value=4.7e-09  Score=79.07  Aligned_cols=102  Identities=19%  Similarity=0.182  Sum_probs=69.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCC---CEEEEeeCChH--H-HHHHHHH---------HHh-c--------CCeEE
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFG---AIVHTCSRNET--E-LNQRIQE---------WKS-K--------GLQVS   65 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g---~~v~~~~~~~~--~-~~~~~~~---------~~~-~--------~~~~~   65 (120)
                      .+++|+++||||+|+||..++++|++.+   .+|+++.|...  . .+....+         +.+ .        ..++.
T Consensus         8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~   87 (491)
T PLN02996          8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT   87 (491)
T ss_pred             HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence            3789999999999999999999998865   36788877542  1 1111111         111 0        15789


Q ss_pred             EEeccCCCH-------HHHHHHHHHHHhhcCCcccEEEecCCCCCc----cceeeeeccceeccc
Q 033396           66 GNACDLKIR-------AQREKLMETVSSQFDGKLNILVSSAQLPYS----QRKFFVKSRGPYGSI  119 (120)
Q Consensus        66 ~~~~D~~~~-------~~~~~~~~~~~~~~~g~id~li~~ag~~~~----~~~~~~n~~g~~~~~  119 (120)
                      ++.+|++++       +.+..++        ..+|+|||+|+...+    ...+++|+.|+.+++
T Consensus        88 ~i~GDl~~~~LGLs~~~~~~~l~--------~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll  144 (491)
T PLN02996         88 PVPGDISYDDLGVKDSNLREEMW--------KEIDIVVNLAATTNFDERYDVALGINTLGALNVL  144 (491)
T ss_pred             EEecccCCcCCCCChHHHHHHHH--------hCCCEEEECccccCCcCCHHHHHHHHHHHHHHHH
Confidence            999999854       3344444        358999999998663    344677877776543

>PLN02206 UDP-glucuronate decarboxylase

Probab=98.90  E-value=1.9e-09  Score=80.28  Aligned_cols=94  Identities=17%  Similarity=0.158  Sum_probs=65.9

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHH-HHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQ-RIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+++.++||||+|.||+.++++|+++|++|+.+++......+ ....+  ...++.++..|+.++.     +        
T Consensus       117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~--~~~~~~~i~~D~~~~~-----l--------  181 (442)
T PLN02206        117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHF--SNPNFELIRHDVVEPI-----L--------  181 (442)
T ss_pred             cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhc--cCCceEEEECCccChh-----h--------
Confidence            467899999999999999999999999999998875322111 11111  1235677788886542     2        


Q ss_pred             CcccEEEecCCCCCc-------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                      ..+|.|||+|+....       ...+++|+.|+.+++
T Consensus       182 ~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLl  218 (442)
T PLN02206        182 LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNML  218 (442)
T ss_pred             cCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHH
Confidence            258999999986542       344568888776653

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=98.89  E-value=2.1e-09  Score=75.90  Aligned_cols=92  Identities=15%  Similarity=0.093  Sum_probs=62.3

Q ss_pred             EEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   94 (120)
                      ++|||++|.||.+++++|.++|+ .|+++++..... . ..++   ..  ..+..|+++++.++.+.+.   .+ .++|+
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~-~~~~---~~--~~~~~d~~~~~~~~~~~~~---~~-~~~D~   69 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-K-FLNL---AD--LVIADYIDKEDFLDRLEKG---AF-GKIEA   69 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-h-hhhh---hh--eeeeccCcchhHHHHHHhh---cc-CCCCE
Confidence            58999999999999999999997 688887654321 1 1111   11  2456788887666655542   23 57999


Q ss_pred             EEecCCCCCc-----cceeeeeccceecc
Q 033396           95 LVSSAQLPYS-----QRKFFVKSRGPYGS  118 (120)
Q Consensus        95 li~~ag~~~~-----~~~~~~n~~g~~~~  118 (120)
                      |||+|+....     ...+++|+.++.++
T Consensus        70 vvh~A~~~~~~~~~~~~~~~~n~~~~~~l   98 (314)
T TIGR02197        70 IFHQGACSDTTETDGEYMMENNYQYSKRL   98 (314)
T ss_pred             EEECccccCccccchHHHHHHHHHHHHHH
Confidence            9999997542     23456676666554

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=98.86  E-value=3.3e-09  Score=78.83  Aligned_cols=94  Identities=15%  Similarity=0.102  Sum_probs=64.7

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      ++++++||||+|.||+.++++|++.|++|+.+++...........+.. ...+.++..|+.+..     +        .+
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~-~~~~~~~~~Di~~~~-----~--------~~  184 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFG-NPRFELIRHDVVEPI-----L--------LE  184 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhcc-CCceEEEECcccccc-----c--------cC
Confidence            456899999999999999999999999999998753221111111111 234667777876532     2        35


Q ss_pred             ccEEEecCCCCCc-------cceeeeeccceeccc
Q 033396           92 LNILVSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        92 id~li~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                      +|+|||+|+....       ...+++|+.|+.+++
T Consensus       185 ~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLl  219 (436)
T PLN02166        185 VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNML  219 (436)
T ss_pred             CCEEEECceeccchhhccCHHHHHHHHHHHHHHHH
Confidence            8999999986542       234668888776653

>PLN02503 fatty acyl-CoA reductase 2

Probab=98.86  E-value=4.5e-09  Score=80.68  Aligned_cols=101  Identities=14%  Similarity=0.202  Sum_probs=69.7

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCC---CEEEEeeCCh--HHHHHHH-HHH---------Hhc---------CCeEEE
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFG---AIVHTCSRNE--TELNQRI-QEW---------KSK---------GLQVSG   66 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g---~~v~~~~~~~--~~~~~~~-~~~---------~~~---------~~~~~~   66 (120)
                      +++|+++||||+|.||..++++|++.+   .+|+++.|..  ....+.. +++         .+.         ..++..
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            689999999999999999999999866   3678887743  2222221 121         111         246889


Q ss_pred             EeccCCCHH------HHHHHHHHHHhhcCCcccEEEecCCCCCc----cceeeeeccceeccc
Q 033396           67 NACDLKIRA------QREKLMETVSSQFDGKLNILVSSAQLPYS----QRKFFVKSRGPYGSI  119 (120)
Q Consensus        67 ~~~D~~~~~------~~~~~~~~~~~~~~g~id~li~~ag~~~~----~~~~~~n~~g~~~~~  119 (120)
                      +.+|++++.      ..+.+.        ..+|+|||+|+...+    ...+++|+.|+.+++
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~--------~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLL  251 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIA--------KEVDVIINSAANTTFDERYDVAIDINTRGPCHLM  251 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHH--------hcCCEEEECccccccccCHHHHHHHHHHHHHHHH
Confidence            999999873      233322        358999999998763    334577777766543

>PLN02778 3,5-epimerase/4-reductase

Probab=98.86  E-value=4.2e-09  Score=74.60  Aligned_cols=77  Identities=19%  Similarity=0.082  Sum_probs=56.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      .+.++||||+|.||+.++++|+++|++|+...                        .|+++.+.+...++.      .++
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~------------------------~~~~~~~~v~~~l~~------~~~   58 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS------------------------GRLENRASLEADIDA------VKP   58 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec------------------------CccCCHHHHHHHHHh------cCC
Confidence            35799999999999999999999999886432                        234555555555543      368


Q ss_pred             cEEEecCCCCCc----------cceeeeeccceeccc
Q 033396           93 NILVSSAQLPYS----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        93 d~li~~ag~~~~----------~~~~~~n~~g~~~~~  119 (120)
                      |+|||+|+....          ...+++|+.|+.+++
T Consensus        59 D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll   95 (298)
T PLN02778         59 THVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLA   95 (298)
T ss_pred             CEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHH
Confidence            999999998641          234678888776653

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=98.85  E-value=1.5e-09  Score=76.38  Aligned_cols=76  Identities=18%  Similarity=0.134  Sum_probs=58.1

Q ss_pred             EEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccEEE
Q 033396           17 LVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILV   96 (120)
Q Consensus        17 litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~li   96 (120)
                      +||||+|.||..+++.|++.|+.|+++.+.                    ..+|+++.++++++++.      .++|+||
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~--------------------~~~Dl~~~~~l~~~~~~------~~~d~Vi   54 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH--------------------KELDLTRQADVEAFFAK------EKPTYVI   54 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc--------------------ccCCCCCHHHHHHHHhc------cCCCEEE
Confidence            689999999999999999999887765432                    14799999988888765      3579999


Q ss_pred             ecCCCCC--------ccceeeeeccceecc
Q 033396           97 SSAQLPY--------SQRKFFVKSRGPYGS  118 (120)
Q Consensus        97 ~~ag~~~--------~~~~~~~n~~g~~~~  118 (120)
                      |+|+...        +...++.|+.++.++
T Consensus        55 h~A~~~~~~~~~~~~~~~~~~~n~~~~~~l   84 (306)
T PLN02725         55 LAAAKVGGIHANMTYPADFIRENLQIQTNV   84 (306)
T ss_pred             EeeeeecccchhhhCcHHHHHHHhHHHHHH
Confidence            9998643        223456777776654

>PRK12320 hypothetical protein; Provisional

Probab=98.83  E-value=9.7e-09  Score=79.90  Aligned_cols=85  Identities=21%  Similarity=0.185  Sum_probs=63.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   94 (120)
                      +++||||+|.||+.++++|.++|++|+.+++.+...         ....+.++.+|++++. +.+++        .++|+
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---------~~~~ve~v~~Dl~d~~-l~~al--------~~~D~   63 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---------LDPRVDYVCASLRNPV-LQELA--------GEADA   63 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---------ccCCceEEEccCCCHH-HHHHh--------cCCCE
Confidence            589999999999999999999999999999865321         1235678899999873 44443        46899


Q ss_pred             EEecCCCCCccceeeeeccceecc
Q 033396           95 LVSSAQLPYSQRKFFVKSRGPYGS  118 (120)
Q Consensus        95 li~~ag~~~~~~~~~~n~~g~~~~  118 (120)
                      +||+++..... ...+|+.|+.++
T Consensus        64 VIHLAa~~~~~-~~~vNv~Gt~nL   86 (699)
T PRK12320         64 VIHLAPVDTSA-PGGVGITGLAHV   86 (699)
T ss_pred             EEEcCccCccc-hhhHHHHHHHHH
Confidence            99999875432 224566665554

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=98.82  E-value=3.7e-09  Score=74.12  Aligned_cols=76  Identities=17%  Similarity=0.213  Sum_probs=65.2

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccEE
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNIL   95 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~l   95 (120)
                      ++|||++|-+|.++++.|. .+..|+.+++..                     +|++|++.+.+++.+      -++|+|
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------------~Ditd~~~v~~~i~~------~~PDvV   54 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE---------------------LDITDPDAVLEVIRE------TRPDVV   54 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------------ccccChHHHHHHHHh------hCCCEE
Confidence            8999999999999999999 668898888764                     799999999999987      489999


Q ss_pred             EecCCCCCc-------cceeeeeccceeccc
Q 033396           96 VSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        96 i~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                      ||+|++...       ...+.+|..|+.+++
T Consensus        55 In~AAyt~vD~aE~~~e~A~~vNa~~~~~lA   85 (281)
T COG1091          55 INAAAYTAVDKAESEPELAFAVNATGAENLA   85 (281)
T ss_pred             EECccccccccccCCHHHHHHhHHHHHHHHH
Confidence            999999874       455788888877654

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.82  E-value=2.7e-08  Score=72.96  Aligned_cols=81  Identities=21%  Similarity=0.278  Sum_probs=61.5

Q ss_pred             cccCcEEEEecC---------------CCc-hHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCC
Q 033396           10 SLKGMTALVTGG---------------TKG-IGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKI   73 (120)
Q Consensus        10 ~~~~~~~litGa---------------~~~-ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   73 (120)
                      ++++|.++|||+               ++| +|.+++++|..+|++|+++.+.....         ....  ...+|+++
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---------~~~~--~~~~~v~~  250 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---------TPPG--VKSIKVST  250 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---------CCCC--cEEEEecc
Confidence            478999999999               556 99999999999999999987654221         1111  24579999


Q ss_pred             HHHH-HHHHHHHHhhcCCcccEEEecCCCCCcc
Q 033396           74 RAQR-EKLMETVSSQFDGKLNILVSSAQLPYSQ  105 (120)
Q Consensus        74 ~~~~-~~~~~~~~~~~~g~id~li~~ag~~~~~  105 (120)
                      .+++ ++++++.   + +.+|++|+|||+..+.
T Consensus       251 ~~~~~~~~~~~~---~-~~~D~~i~~Aavsd~~  279 (390)
T TIGR00521       251 AEEMLEAALNEL---A-KDFDIFISAAAVADFK  279 (390)
T ss_pred             HHHHHHHHHHhh---c-ccCCEEEEcccccccc
Confidence            8887 5555442   3 6799999999998753

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK07201 short chain dehydrogenase; Provisional

Probab=98.80  E-value=1.7e-08  Score=78.03  Aligned_cols=97  Identities=24%  Similarity=0.226  Sum_probs=64.8

Q ss_pred             EEEEecCCCchHHHHHHHHH--HCCCEEEEeeCChHH--HHHHHHHHHhcCCeEEEEeccCCCHHH--HHHHHHHHHhhc
Q 033396           15 TALVTGGTKGIGYAVVEELA--AFGAIVHTCSRNETE--LNQRIQEWKSKGLQVSGNACDLKIRAQ--REKLMETVSSQF   88 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~--~~g~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~--~~~~~~~~~~~~   88 (120)
                      +++||||+|.||++++++|+  +.|++|++++|+...  +......+  ...++..+.+|+++++.  ....++++    
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~~~~l----   75 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYW--GADRVVPLVGDLTEPGLGLSEADIAEL----   75 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhc--CCCcEEEEecccCCccCCcCHHHHHHh----
Confidence            69999999999999999999  588999999996432  22211111  11468888999998531  01122222    


Q ss_pred             CCcccEEEecCCCCCc----cceeeeeccceecc
Q 033396           89 DGKLNILVSSAQLPYS----QRKFFVKSRGPYGS  118 (120)
Q Consensus        89 ~g~id~li~~ag~~~~----~~~~~~n~~g~~~~  118 (120)
                       .++|++||+|+....    ....++|+.|+.++
T Consensus        76 -~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~l  108 (657)
T PRK07201         76 -GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNV  108 (657)
T ss_pred             -cCCCEEEECceeecCCCCHHHHHHHHhHHHHHH
Confidence             468999999997552    23345666665443

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.74  E-value=4.9e-08  Score=70.59  Aligned_cols=97  Identities=20%  Similarity=0.142  Sum_probs=69.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCCh---HHHHHHHHHHH-------hcCCeEEEEeccCCCHH------H
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNE---TELNQRIQEWK-------SKGLQVSGNACDLKIRA------Q   76 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~---~~~~~~~~~~~-------~~~~~~~~~~~D~~~~~------~   76 (120)
                      +++++|||+|++|..+.++|+.+- ++|++.-|-.   ...+.+.+.+.       ....++..+.+|++.+.      .
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            478999999999999999988755 6888887732   22333444333       23689999999999653      3


Q ss_pred             HHHHHHHHHhhcCCcccEEEecCCCCCc----cceeeeeccceecc
Q 033396           77 REKLMETVSSQFDGKLNILVSSAQLPYS----QRKFFVKSRGPYGS  118 (120)
Q Consensus        77 ~~~~~~~~~~~~~g~id~li~~ag~~~~----~~~~~~n~~g~~~~  118 (120)
                      ++++.        ..+|.++||++...+    .+....|+.|+..+
T Consensus        81 ~~~La--------~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~ev  118 (382)
T COG3320          81 WQELA--------ENVDLIIHNAALVNHVFPYSELRGANVLGTAEV  118 (382)
T ss_pred             HHHHh--------hhcceEEecchhhcccCcHHHhcCcchHhHHHH
Confidence            33333        569999999999885    34457777776544

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=98.72  E-value=3.5e-08  Score=69.13  Aligned_cols=77  Identities=16%  Similarity=0.110  Sum_probs=59.0

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccEE
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNIL   95 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~l   95 (120)
                      ++||||+|.+|+.++++|++.|++|.++.|++....         ...+..+.+|+.|++++..+++.. +...|.+|.+
T Consensus         2 ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---------~~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~v   71 (285)
T TIGR03649         2 ILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---------GPNEKHVKFDWLDEDTWDNPFSSD-DGMEPEISAV   71 (285)
T ss_pred             EEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---------CCCCccccccCCCHHHHHHHHhcc-cCcCCceeEE
Confidence            789999999999999999999999999999875431         113445678999999988888643 2231238988


Q ss_pred             EecCCCC
Q 033396           96 VSSAQLP  102 (120)
Q Consensus        96 i~~ag~~  102 (120)
                      +++++..
T Consensus        72 ~~~~~~~   78 (285)
T TIGR03649        72 YLVAPPI   78 (285)
T ss_pred             EEeCCCC
Confidence            8887753

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.67  E-value=4.4e-07  Score=61.84  Aligned_cols=76  Identities=22%  Similarity=0.227  Sum_probs=60.1

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccEE
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNIL   95 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~l   95 (120)
                      ++|+|++|.+|+.+++.|.+.+++|.++.|+..+  ...+++...|.  ..+..|..|++++.+++        .++|.+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~g~--~vv~~d~~~~~~l~~al--------~g~d~v   68 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQALGA--EVVEADYDDPESLVAAL--------KGVDAV   68 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHTTT--EEEES-TT-HHHHHHHH--------TTCSEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhcccc--eEeecccCCHHHHHHHH--------cCCceE
Confidence            6899999999999999999999999999998743  22334444555  45699999999998888        689999


Q ss_pred             EecCCCCC
Q 033396           96 VSSAQLPY  103 (120)
Q Consensus        96 i~~ag~~~  103 (120)
                      +.+.+...
T Consensus        69 ~~~~~~~~   76 (233)
T PF05368_consen   69 FSVTPPSH   76 (233)
T ss_dssp             EEESSCSC
T ss_pred             EeecCcch
Confidence            99988653

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.66  E-value=2.8e-07  Score=67.40  Aligned_cols=77  Identities=21%  Similarity=0.270  Sum_probs=61.0

Q ss_pred             EEEecCCCchHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      ++|.|+ |.+|+.+++.|++.+.  +|++.+|+...+++..+++  .+.++....+|+.|.+++.+++        .+.|
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~--------~~~d   69 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELL--------RGCD   69 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHH--------TTSS
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHH--------hcCC
Confidence            678999 9999999999999884  8999999998887776654  4678999999999999988888        5679


Q ss_pred             EEEecCCCCC
Q 033396           94 ILVSSAQLPY  103 (120)
Q Consensus        94 ~li~~ag~~~  103 (120)
                      +|||++|...
T Consensus        70 vVin~~gp~~   79 (386)
T PF03435_consen   70 VVINCAGPFF   79 (386)
T ss_dssp             EEEE-SSGGG
T ss_pred             EEEECCccch
Confidence            9999998764

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=98.63  E-value=2.5e-08  Score=69.62  Aligned_cols=84  Identities=19%  Similarity=0.086  Sum_probs=54.4

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccEE
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNIL   95 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~l   95 (120)
                      ++||||+|.||..++++|+++|++|+.++|++.......      .  ...  .|... ...       .+.+ ..+|+|
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~--~~~--~~~~~-~~~-------~~~~-~~~D~V   61 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK------W--EGY--KPWAP-LAE-------SEAL-EGADAV   61 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc------c--eee--ecccc-cch-------hhhc-CCCCEE
Confidence            589999999999999999999999999999875432110      0  011  12221 111       1233 579999


Q ss_pred             EecCCCCCc---------cceeeeeccceecc
Q 033396           96 VSSAQLPYS---------QRKFFVKSRGPYGS  118 (120)
Q Consensus        96 i~~ag~~~~---------~~~~~~n~~g~~~~  118 (120)
                      ||++|....         ...+++|+.++.++
T Consensus        62 vh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l   93 (292)
T TIGR01777        62 INLAGEPIADKRWTEERKQEIRDSRIDTTRAL   93 (292)
T ss_pred             EECCCCCcccccCCHHHHHHHHhcccHHHHHH
Confidence            999997542         12345666665443

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.62  E-value=4.1e-07  Score=67.69  Aligned_cols=79  Identities=24%  Similarity=0.337  Sum_probs=60.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ++++|+++|+|+++ +|.++++.|++.|++|++++++. ..+++..+++...+  +.++..|..+.            ..
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~------------~~   66 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELG--IELVLGEYPEE------------FL   66 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CEEEeCCcchh------------Hh
Confidence            46789999999877 99999999999999999999975 44555555565445  34666777651            12


Q ss_pred             CCcccEEEecCCCCCc
Q 033396           89 DGKLNILVSSAQLPYS  104 (120)
Q Consensus        89 ~g~id~li~~ag~~~~  104 (120)
                       +.+|+||+++|+...
T Consensus        67 -~~~d~vv~~~g~~~~   81 (450)
T PRK14106         67 -EGVDLVVVSPGVPLD   81 (450)
T ss_pred             -hcCCEEEECCCCCCC
Confidence             679999999998663

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.62  E-value=6.4e-08  Score=75.29  Aligned_cols=77  Identities=14%  Similarity=0.025  Sum_probs=58.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      .+.++|||++|.||++++++|.++|++|..                        ...|++|.+.+.+++.+      -++
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~------------------------~~~~l~d~~~v~~~i~~------~~p  429 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEY------------------------GKGRLEDRSSLLADIRN------VKP  429 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEe------------------------eccccccHHHHHHHHHh------hCC
Confidence            346999999999999999999999987631                        12467788777777654      268


Q ss_pred             cEEEecCCCCC----------ccceeeeeccceeccc
Q 033396           93 NILVSSAQLPY----------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        93 d~li~~ag~~~----------~~~~~~~n~~g~~~~~  119 (120)
                      |+|||+|++..          +...+++|+.|+.+++
T Consensus       430 d~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~  466 (668)
T PLN02260        430 THVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLA  466 (668)
T ss_pred             CEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHH
Confidence            99999999763          1344678888877654

>PRK09620 hypothetical protein; Provisional

Probab=98.60  E-value=1.1e-07  Score=65.24  Aligned_cols=86  Identities=21%  Similarity=0.197  Sum_probs=54.1

Q ss_pred             ccCcEEEEecCC----------------CchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCH
Q 033396           11 LKGMTALVTGGT----------------KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR   74 (120)
Q Consensus        11 ~~~~~~litGa~----------------~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   74 (120)
                      ++||.++||+|.                |.+|.++|++|.++|+.|+++++.......   .. ..+..+..+..+    
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~-~~~~~~~~V~s~----   72 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DI-NNQLELHPFEGI----   72 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---cc-CCceeEEEEecH----
Confidence            468999999886                899999999999999999988764221100   00 012222333332    


Q ss_pred             HHHHHHHHHHHhhcCCcccEEEecCCCCCccc
Q 033396           75 AQREKLMETVSSQFDGKLNILVSSAQLPYSQR  106 (120)
Q Consensus        75 ~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  106 (120)
                      .++...+.++.+.  .++|++||+|++..+.+
T Consensus        73 ~d~~~~l~~~~~~--~~~D~VIH~AAvsD~~~  102 (229)
T PRK09620         73 IDLQDKMKSIITH--EKVDAVIMAAAGSDWVV  102 (229)
T ss_pred             HHHHHHHHHHhcc--cCCCEEEECccccceec
Confidence            2222333333322  36899999999988643

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.57  E-value=9.6e-07  Score=55.83  Aligned_cols=78  Identities=26%  Similarity=0.389  Sum_probs=59.8

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCE-EEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++++.++|.|+ ||.|++++..|++.|++ |.++.|+.++++++.+.+  .+..+..+.  +.+   +...+       
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~--~~~~~~~~~--~~~---~~~~~-------   73 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF--GGVNIEAIP--LED---LEEAL-------   73 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH--TGCSEEEEE--GGG---HCHHH-------
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc--Cccccceee--HHH---HHHHH-------
Confidence            589999999998 99999999999999976 999999999988888877  223344433  322   22333       


Q ss_pred             CCcccEEEecCCCCC
Q 033396           89 DGKLNILVSSAQLPY  103 (120)
Q Consensus        89 ~g~id~li~~ag~~~  103 (120)
                       ...|++|++.+...
T Consensus        74 -~~~DivI~aT~~~~   87 (135)
T PF01488_consen   74 -QEADIVINATPSGM   87 (135)
T ss_dssp             -HTESEEEE-SSTTS
T ss_pred             -hhCCeEEEecCCCC
Confidence             56899999998865

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.56  E-value=6.3e-07  Score=65.59  Aligned_cols=79  Identities=22%  Similarity=0.267  Sum_probs=66.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      +.++|.|| |++|+.+|..|++.+ .+|++.+|+..+..++....   +.++....+|+.+.+.+.++++        ..
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~---~~~v~~~~vD~~d~~al~~li~--------~~   69 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI---GGKVEALQVDAADVDALVALIK--------DF   69 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc---cccceeEEecccChHHHHHHHh--------cC
Confidence            46888898 999999999999999 89999999987776665443   3478899999999999998884        45


Q ss_pred             cEEEecCCCCCc
Q 033396           93 NILVSSAQLPYS  104 (120)
Q Consensus        93 d~li~~ag~~~~  104 (120)
                      |++||++.....
T Consensus        70 d~VIn~~p~~~~   81 (389)
T COG1748          70 DLVINAAPPFVD   81 (389)
T ss_pred             CEEEEeCCchhh
Confidence            999999987764

>PLN00016 RNA-binding protein; Provisional

Probab=98.50  E-value=4.5e-07  Score=66.13  Aligned_cols=79  Identities=18%  Similarity=0.173  Sum_probs=54.3

Q ss_pred             cCcEEEEe----cCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHH-------HHHHHhcCCeEEEEeccCCCHHHHHHH
Q 033396           12 KGMTALVT----GGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR-------IQEWKSKGLQVSGNACDLKIRAQREKL   80 (120)
Q Consensus        12 ~~~~~lit----Ga~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~D~~~~~~~~~~   80 (120)
                      ..++++||    ||+|.||..++++|+++|++|++++|+.......       ..++..  ..+.++.+|+.+   +.++
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~v~~v~~D~~d---~~~~  125 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSS--AGVKTVWGDPAD---VKSK  125 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhh--cCceEEEecHHH---HHhh
Confidence            45679999    9999999999999999999999999976432111       112211  235677778765   3333


Q ss_pred             HHHHHhhcCCcccEEEecCCC
Q 033396           81 METVSSQFDGKLNILVSSAQL  101 (120)
Q Consensus        81 ~~~~~~~~~g~id~li~~ag~  101 (120)
                      +.     . ..+|+||++++.
T Consensus       126 ~~-----~-~~~d~Vi~~~~~  140 (378)
T PLN00016        126 VA-----G-AGFDVVYDNNGK  140 (378)
T ss_pred             hc-----c-CCccEEEeCCCC
Confidence            31     1 368888888764

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.48  E-value=1.4e-06  Score=60.13  Aligned_cols=73  Identities=27%  Similarity=0.135  Sum_probs=60.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   94 (120)
                      .++||||+|.+|++++++|.+.|+.|....|++.......       ..+.+...|+.++.++...+        .+++.
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-------~~v~~~~~d~~~~~~l~~a~--------~G~~~   66 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-------GGVEVVLGDLRDPKSLVAGA--------KGVDG   66 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-------CCcEEEEeccCCHhHHHHHh--------ccccE
Confidence            5899999999999999999999999999999987765433       45778889999999888887        56777


Q ss_pred             EEecCCCC
Q 033396           95 LVSSAQLP  102 (120)
Q Consensus        95 li~~ag~~  102 (120)
                      +++..+..
T Consensus        67 ~~~i~~~~   74 (275)
T COG0702          67 VLLISGLL   74 (275)
T ss_pred             EEEEeccc
Confidence            66666644

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=98.46  E-value=4e-07  Score=63.88  Aligned_cols=97  Identities=16%  Similarity=0.191  Sum_probs=68.0

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +...+++++||||+|+||++++.+|..+|..|+.+|.-..........+-. ...+..+..|+..+     ++.      
T Consensus        23 ~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~-~~~fel~~hdv~~p-----l~~------   90 (350)
T KOG1429|consen   23 KPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIG-HPNFELIRHDVVEP-----LLK------   90 (350)
T ss_pred             cCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhcc-CcceeEEEeechhH-----HHH------
Confidence            456788999999999999999999999999999999865554444444322 34566777787665     332      


Q ss_pred             CCcccEEEecCCCCC-------ccceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPY-------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~-------~~~~~~~n~~g~~~~~  119 (120)
                        .+|-++|-|..-.       +.+.+.+|..|+.++.
T Consensus        91 --evD~IyhLAapasp~~y~~npvktIktN~igtln~l  126 (350)
T KOG1429|consen   91 --EVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNML  126 (350)
T ss_pred             --HhhhhhhhccCCCCcccccCccceeeecchhhHHHH
Confidence              3455555554433       3566788888877653

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.44  E-value=6.1e-07  Score=63.16  Aligned_cols=98  Identities=21%  Similarity=0.132  Sum_probs=73.3

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .+++|-++-|.||+|.+|+.++-+|++.|..|++..|..+......+-+... +.+.+...|..|+++++++++      
T Consensus        57 sS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdL-GQvl~~~fd~~DedSIr~vvk------  129 (391)
T KOG2865|consen   57 SSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDL-GQVLFMKFDLRDEDSIRAVVK------  129 (391)
T ss_pred             ccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccc-cceeeeccCCCCHHHHHHHHH------
Confidence            3578888889999999999999999999999999999654322222222222 568999999999999999994      


Q ss_pred             CCcccEEEecCCCCCc---cceeeeeccce
Q 033396           89 DGKLNILVSSAQLPYS---QRKFFVKSRGP  115 (120)
Q Consensus        89 ~g~id~li~~ag~~~~---~~~~~~n~~g~  115 (120)
                        .-++|||-.|--.+   ....++|+.++
T Consensus       130 --~sNVVINLIGrd~eTknf~f~Dvn~~~a  157 (391)
T KOG2865|consen  130 --HSNVVINLIGRDYETKNFSFEDVNVHIA  157 (391)
T ss_pred             --hCcEEEEeeccccccCCcccccccchHH
Confidence              46899998887553   23345555544

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.43  E-value=6.1e-07  Score=63.01  Aligned_cols=100  Identities=21%  Similarity=0.143  Sum_probs=72.7

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHH--HHH-HHHHH-hcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETEL--NQR-IQEWK-SKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~--~~~-~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .|++||||=+|--|..+++.|++.|+.|+.+.|.....  ... +-++. ....+++.+.+|++|..++.++++++    
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v----   77 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV----   77 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc----
Confidence            68999999999999999999999999999997753221  111 11111 22566889999999999999999874    


Q ss_pred             CCcccEEEecCCCCC-------ccceeeeeccceecc
Q 033396           89 DGKLNILVSSAQLPY-------SQRKFFVKSRGPYGS  118 (120)
Q Consensus        89 ~g~id~li~~ag~~~-------~~~~~~~n~~g~~~~  118 (120)
                        ++|-+.|-++-.+       +....+++..|+.++
T Consensus        78 --~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrl  112 (345)
T COG1089          78 --QPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRL  112 (345)
T ss_pred             --CchhheeccccccccccccCcceeeeechhHHHHH
Confidence              6777777776655       233456666665544

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.42  E-value=3e-06  Score=61.20  Aligned_cols=74  Identities=28%  Similarity=0.305  Sum_probs=55.0

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHC-C-CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAF-G-AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~-g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      ++++|+++||||+|.||+.++++|+++ | .++++++|+...+..+..++..         .++.   ++.+.+      
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~---------~~i~---~l~~~l------  213 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG---------GKIL---SLEEAL------  213 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc---------ccHH---hHHHHH------
Confidence            578999999999999999999999864 5 5899999988777666554311         1222   233233      


Q ss_pred             cCCcccEEEecCCCCC
Q 033396           88 FDGKLNILVSSAQLPY  103 (120)
Q Consensus        88 ~~g~id~li~~ag~~~  103 (120)
                        ...|++|++++...
T Consensus       214 --~~aDiVv~~ts~~~  227 (340)
T PRK14982        214 --PEADIVVWVASMPK  227 (340)
T ss_pred             --ccCCEEEECCcCCc
Confidence              56899999999855

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=98.42  E-value=1e-06  Score=73.28  Aligned_cols=102  Identities=14%  Similarity=0.119  Sum_probs=65.5

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCC----CEEEEeeCChHH---HHHHHHHHHhc-------CCeEEEEeccCCCHHH-H
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFG----AIVHTCSRNETE---LNQRIQEWKSK-------GLQVSGNACDLKIRAQ-R   77 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g----~~v~~~~~~~~~---~~~~~~~~~~~-------~~~~~~~~~D~~~~~~-~   77 (120)
                      .++++|||++|++|..++++|++.+    .+|+.+.|....   .+.....+...       ..++.++.+|++++.- +
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            5789999999999999999999887    788888886422   22222222111       2368889999986521 0


Q ss_pred             -HHHHHHHHhhcCCcccEEEecCCCCCcc----ceeeeeccceecc
Q 033396           78 -EKLMETVSSQFDGKLNILVSSAQLPYSQ----RKFFVKSRGPYGS  118 (120)
Q Consensus        78 -~~~~~~~~~~~~g~id~li~~ag~~~~~----~~~~~n~~g~~~~  118 (120)
                       ...++++   . ..+|++||||+...+.    .....|+.|+.++
T Consensus      1051 ~~~~~~~l---~-~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~l 1092 (1389)
T TIGR03443      1051 SDEKWSDL---T-NEVDVIIHNGALVHWVYPYSKLRDANVIGTINV 1092 (1389)
T ss_pred             CHHHHHHH---H-hcCCEEEECCcEecCccCHHHHHHhHHHHHHHH
Confidence             1112221   1 4689999999987642    1123566665544

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.41  E-value=3.2e-07  Score=68.36  Aligned_cols=106  Identities=21%  Similarity=0.165  Sum_probs=71.2

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCC---CEEEEeeCCh--HHHHH---------HHHHHHhc----CCeEEEEeccC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFG---AIVHTCSRNE--TELNQ---------RIQEWKSK----GLQVSGNACDL   71 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g---~~v~~~~~~~--~~~~~---------~~~~~~~~----~~~~~~~~~D~   71 (120)
                      .+++|+++||||+|++|..++++|++..   .++++.-|..  ...++         +-+.+.+.    -.++..+.+|+
T Consensus         9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi   88 (467)
T KOG1221|consen    9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI   88 (467)
T ss_pred             HhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence            3789999999999999999999999855   4677776642  11111         11122221    36888899999


Q ss_pred             CCHHH-HH-HHHHHHHhhcCCcccEEEecCCCCCcc----ceeeeeccceeccc
Q 033396           72 KIRAQ-RE-KLMETVSSQFDGKLNILVSSAQLPYSQ----RKFFVKSRGPYGSI  119 (120)
Q Consensus        72 ~~~~~-~~-~~~~~~~~~~~g~id~li~~ag~~~~~----~~~~~n~~g~~~~~  119 (120)
                      ++++- +. .-++..   . ..+|++||+|+...+.    ..+.+|+.|+.+++
T Consensus        89 ~~~~LGis~~D~~~l---~-~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l  138 (467)
T KOG1221|consen   89 SEPDLGISESDLRTL---A-DEVNIVIHSAATVRFDEPLDVALGINTRGTRNVL  138 (467)
T ss_pred             cCcccCCChHHHHHH---H-hcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHH
Confidence            88752 11 111111   1 5799999999998864    44678888876654

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.37  E-value=2.5e-06  Score=61.49  Aligned_cols=80  Identities=18%  Similarity=0.181  Sum_probs=69.0

Q ss_pred             EEEecCCCchHHHHHHHHHH----CCCEEEEeeCChHHHHHHHHHHHhcC----CeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           16 ALVTGGTKGIGYAVVEELAA----FGAIVHTCSRNETELNQRIQEWKSKG----LQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~----~g~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      ++|-||+|.-|..+++++.+    .+..+.+.+|++.++++..+.+.+..    .....+.+|.+|+++++++..     
T Consensus         8 vVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak-----   82 (423)
T KOG2733|consen    8 VVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK-----   82 (423)
T ss_pred             EEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh-----
Confidence            78999999999999999999    78889999999999999988887653    223388899999999999884     


Q ss_pred             cCCcccEEEecCCCCC
Q 033396           88 FDGKLNILVSSAQLPY  103 (120)
Q Consensus        88 ~~g~id~li~~ag~~~  103 (120)
                         +..+++||+|-..
T Consensus        83 ---~~~vivN~vGPyR   95 (423)
T KOG2733|consen   83 ---QARVIVNCVGPYR   95 (423)
T ss_pred             ---hhEEEEeccccce
Confidence               4689999999866

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.30  E-value=5.1e-06  Score=57.05  Aligned_cols=77  Identities=14%  Similarity=0.094  Sum_probs=48.8

Q ss_pred             EEEEecCC-CchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           15 TALVTGGT-KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        15 ~~litGa~-~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      +=+||+.+ |++|.+++++|+++|++|+++++.....       ......+.++.+  .+.+++   .+.+.+.+ +.+|
T Consensus        17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~-------~~~~~~v~~i~v--~s~~~m---~~~l~~~~-~~~D   83 (229)
T PRK06732         17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK-------PEPHPNLSIIEI--ENVDDL---LETLEPLV-KDHD   83 (229)
T ss_pred             ceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc-------CCCCCCeEEEEE--ecHHHH---HHHHHHHh-cCCC
Confidence            55677654 5599999999999999999998753210       001123444443  222322   23333334 5789


Q ss_pred             EEEecCCCCCc
Q 033396           94 ILVSSAQLPYS  104 (120)
Q Consensus        94 ~li~~ag~~~~  104 (120)
                      ++|||||+..+
T Consensus        84 ivIh~AAvsd~   94 (229)
T PRK06732         84 VLIHSMAVSDY   94 (229)
T ss_pred             EEEeCCccCCc
Confidence            99999999764

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.27  E-value=3.1e-06  Score=63.01  Aligned_cols=80  Identities=25%  Similarity=0.390  Sum_probs=55.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++++|.++|||+++ +|.+.++.|++.|++|++.+++........+++...+..+.  ...  ++..   ++.       
T Consensus         2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~--~~~--~~~~---~~~-------   66 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVI--CGS--HPLE---LLD-------   66 (447)
T ss_pred             CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEE--eCC--CCHH---Hhc-------
Confidence            46789999999976 99999999999999999999875443333444555454332  211  1111   111       


Q ss_pred             CcccEEEecCCCCCc
Q 033396           90 GKLNILVSSAQLPYS  104 (120)
Q Consensus        90 g~id~li~~ag~~~~  104 (120)
                      ..+|+||+++|+...
T Consensus        67 ~~~d~vV~s~gi~~~   81 (447)
T PRK02472         67 EDFDLMVKNPGIPYT   81 (447)
T ss_pred             CcCCEEEECCCCCCC
Confidence            248999999999874

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.23  E-value=2.6e-06  Score=59.58  Aligned_cols=69  Identities=22%  Similarity=0.278  Sum_probs=48.9

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccEE
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNIL   95 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~l   95 (120)
                      ++|||++|.||++++.+|.+.|+.|+++.|++.......      +.       .+...+.+....+       .++|+|
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~------~~-------~v~~~~~~~~~~~-------~~~Dav   60 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL------HP-------NVTLWEGLADALT-------LGIDAV   60 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc------Cc-------cccccchhhhccc-------CCCCEE
Confidence            589999999999999999999999999999886643111      11       1111222222221       269999


Q ss_pred             EecCCCCCc
Q 033396           96 VSSAQLPYS  104 (120)
Q Consensus        96 i~~ag~~~~  104 (120)
                      ||-||.+-.
T Consensus        61 INLAG~~I~   69 (297)
T COG1090          61 INLAGEPIA   69 (297)
T ss_pred             EECCCCccc
Confidence            999999874

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=98.18  E-value=2.8e-05  Score=49.73  Aligned_cols=77  Identities=21%  Similarity=0.309  Sum_probs=55.8

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .++++.++|+|+ |++|.++++.|.+.| .+|++++|+....++..+++....     +..+.++..+   ++       
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~---~~-------   79 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-----IAIAYLDLEE---LL-------   79 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-----cceeecchhh---cc-------
Confidence            467889999998 899999999999986 789999999887776666553221     1223333332   22       


Q ss_pred             CCcccEEEecCCCCC
Q 033396           89 DGKLNILVSSAQLPY  103 (120)
Q Consensus        89 ~g~id~li~~ag~~~  103 (120)
                       ...|++|+++....
T Consensus        80 -~~~Dvvi~~~~~~~   93 (155)
T cd01065          80 -AEADLIINTTPVGM   93 (155)
T ss_pred             -ccCCEEEeCcCCCC
Confidence             67899999987754

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=98.14  E-value=1.7e-05  Score=55.82  Aligned_cols=76  Identities=20%  Similarity=0.360  Sum_probs=55.1

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .+.++.++|+|+ ||+|+++++.|++.| .+|++++|+.++.+++.+.+.... .+.   .+.    +....+       
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~~---~~~----~~~~~~-------  183 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KAE---LDL----ELQEEL-------  183 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-cee---ecc----cchhcc-------
Confidence            477899999997 899999999999999 789999999888877776654322 111   111    111112       


Q ss_pred             CCcccEEEecCCCC
Q 033396           89 DGKLNILVSSAQLP  102 (120)
Q Consensus        89 ~g~id~li~~ag~~  102 (120)
                       ...|++||+....
T Consensus       184 -~~~DivInaTp~g  196 (278)
T PRK00258        184 -ADFDLIINATSAG  196 (278)
T ss_pred             -ccCCEEEECCcCC
Confidence             5689999998654

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=98.12  E-value=4.2e-05  Score=53.63  Aligned_cols=75  Identities=13%  Similarity=0.229  Sum_probs=55.4

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .++|.++|+|+ |++|++++..|++.|++|++++|+..+.++..+.+...+. +.....     ++   .      .. .
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~-~~~~~~-----~~---~------~~-~  177 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGE-IQAFSM-----DE---L------PL-H  177 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCc-eEEech-----hh---h------cc-c
Confidence            46789999999 6999999999999999999999998887777776654332 222211     11   0      12 4


Q ss_pred             cccEEEecCCCC
Q 033396           91 KLNILVSSAQLP  102 (120)
Q Consensus        91 ~id~li~~ag~~  102 (120)
                      ..|++||+.+..
T Consensus       178 ~~DivInatp~g  189 (270)
T TIGR00507       178 RVDLIINATSAG  189 (270)
T ss_pred             CccEEEECCCCC
Confidence            689999999874

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.98  E-value=6.4e-05  Score=50.05  Aligned_cols=79  Identities=23%  Similarity=0.228  Sum_probs=48.3

Q ss_pred             ccCcEEEEecCC----------------CchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCH
Q 033396           11 LKGMTALVTGGT----------------KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR   74 (120)
Q Consensus        11 ~~~~~~litGa~----------------~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   74 (120)
                      ++||.++||+|.                |-.|.++|+++..+|++|+++..... +..        ...+..+  ++.+.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~--------p~~~~~i--~v~sa   69 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP--------PPGVKVI--RVESA   69 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-------------TTEEEE--E-SSH
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc--------cccceEE--Eecch
Confidence            467888888664                66999999999999999999977631 110        2234443  46666


Q ss_pred             HHHHHHHHHHHhhcCCcccEEEecCCCCCc
Q 033396           75 AQREKLMETVSSQFDGKLNILVSSAQLPYS  104 (120)
Q Consensus        75 ~~~~~~~~~~~~~~~g~id~li~~ag~~~~  104 (120)
                      +++.+.+.+   .+ ..-|++|++|++.++
T Consensus        70 ~em~~~~~~---~~-~~~Di~I~aAAVsDf   95 (185)
T PF04127_consen   70 EEMLEAVKE---LL-PSADIIIMAAAVSDF   95 (185)
T ss_dssp             HHHHHHHHH---HG-GGGSEEEE-SB--SE
T ss_pred             hhhhhhhcc---cc-CcceeEEEecchhhe
Confidence            665555543   34 445999999999886

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=97.98  E-value=2.2e-05  Score=64.24  Aligned_cols=107  Identities=18%  Similarity=0.264  Sum_probs=81.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCE-EEEeeCChHH--HH-HHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETE--LN-QRIQEWKSKGLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~-v~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      ....|.++|+|+-||+|.+++.+|..+|++ +++++|+.-+  .+ .....++++|..+.+-..|++..+...+++++..
T Consensus      1765 ~hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~ 1844 (2376)
T KOG1202|consen 1765 CHPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESN 1844 (2376)
T ss_pred             cCccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhh
Confidence            356789999999999999999999999976 7888887532  22 2355677789999888889998888888888765


Q ss_pred             hhcCCcccEEEecCCCCCc-----------cceeeeeccceecc
Q 033396           86 SQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGS  118 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~  118 (120)
                      +-  +++-+++|-|.+..+           +.+-+.++.|+.++
T Consensus      1845 kl--~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~L 1886 (2376)
T KOG1202|consen 1845 KL--GPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINL 1886 (2376)
T ss_pred             hc--ccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeeh
Confidence            53  788889998887663           34445566666554

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.93  E-value=0.0002  Score=50.69  Aligned_cols=76  Identities=14%  Similarity=0.130  Sum_probs=55.1

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .++++.++|.|+ ||.|++++..|++.|+ +|++++|+..+.+.+.+.+............     +++...+       
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~-----~~~~~~~-------  190 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAG-----SDLAAAL-------  190 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec-----cchHhhh-------
Confidence            467889999998 7899999999999996 7999999998888888777554332222221     1111122       


Q ss_pred             CCcccEEEecC
Q 033396           89 DGKLNILVSSA   99 (120)
Q Consensus        89 ~g~id~li~~a   99 (120)
                       ...|+|||+.
T Consensus       191 -~~aDiVInaT  200 (284)
T PRK12549        191 -AAADGLVHAT  200 (284)
T ss_pred             -CCCCEEEECC
Confidence             4689999994

>PRK06849 hypothetical protein; Provisional

Probab=97.88  E-value=0.00036  Score=51.28  Aligned_cols=83  Identities=10%  Similarity=0.041  Sum_probs=54.7

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      +.+++||||++..+|..+++.|.+.|++|++++.++.........+    .....+...-.+++...+.+.++.++.  +
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~----d~~~~~p~p~~d~~~~~~~L~~i~~~~--~   76 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV----DGFYTIPSPRWDPDAYIQALLSIVQRE--N   76 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh----hheEEeCCCCCCHHHHHHHHHHHHHHc--C
Confidence            4688999999999999999999999999999998865543222222    112222222334444444444444443  5


Q ss_pred             ccEEEecCC
Q 033396           92 LNILVSSAQ  100 (120)
Q Consensus        92 id~li~~ag  100 (120)
                      +|++|....
T Consensus        77 id~vIP~~e   85 (389)
T PRK06849         77 IDLLIPTCE   85 (389)
T ss_pred             CCEEEECCh
Confidence            899998775

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.86  E-value=0.00018  Score=53.48  Aligned_cols=77  Identities=12%  Similarity=0.227  Sum_probs=57.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .+.++.++|.|+ |+.|+.+++.|+..| .+++++.|+....+.+.+++..  .  .     +...+++...+       
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~--~--~-----~~~~~~l~~~l-------  240 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN--A--S-----AHYLSELPQLI-------  240 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC--C--e-----EecHHHHHHHh-------
Confidence            478999999999 999999999999999 4699999998777766665421  1  1     11123333333       


Q ss_pred             CCcccEEEecCCCCCc
Q 033396           89 DGKLNILVSSAQLPYS  104 (120)
Q Consensus        89 ~g~id~li~~ag~~~~  104 (120)
                       ...|++|++.+.+++
T Consensus       241 -~~aDiVI~aT~a~~~  255 (414)
T PRK13940        241 -KKADIIIAAVNVLEY  255 (414)
T ss_pred             -ccCCEEEECcCCCCe
Confidence             678999999999874

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=97.85  E-value=8.5e-05  Score=49.34  Aligned_cols=72  Identities=17%  Similarity=0.125  Sum_probs=59.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   94 (120)
                      .+.|.||+|-.|..++++..++|+.|..+.|++.++...        ..+..++.|+-|+.++.+.+        .+.|+
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--------~~~~i~q~Difd~~~~a~~l--------~g~Da   65 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--------QGVTILQKDIFDLTSLASDL--------AGHDA   65 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--------ccceeecccccChhhhHhhh--------cCCce
Confidence            477899999999999999999999999999998775422        24567788999988876666        67899


Q ss_pred             EEecCCCC
Q 033396           95 LVSSAQLP  102 (120)
Q Consensus        95 li~~ag~~  102 (120)
                      ||...|..
T Consensus        66 VIsA~~~~   73 (211)
T COG2910          66 VISAFGAG   73 (211)
T ss_pred             EEEeccCC
Confidence            99888876

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.81  E-value=0.0003  Score=49.76  Aligned_cols=79  Identities=24%  Similarity=0.298  Sum_probs=55.0

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++++.++|.|+ ||.+++++..|++.|+ +|.++.|+.++.+++.+.+.... .+..    +...+++...+        
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~-~~~~----~~~~~~~~~~~--------  188 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVG-VITR----LEGDSGGLAIE--------  188 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcC-ccee----ccchhhhhhcc--------
Confidence            57889999987 9999999999999995 69999999888877777654321 1111    11112222222        


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                      ...|+|||+..+..
T Consensus       189 ~~~DiVInaTp~g~  202 (282)
T TIGR01809       189 KAAEVLVSTVPADV  202 (282)
T ss_pred             cCCCEEEECCCCCC
Confidence            46899999987654

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.79  E-value=0.00056  Score=48.45  Aligned_cols=81  Identities=14%  Similarity=0.139  Sum_probs=55.2

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ..++|.++|.|+ ||-+++++..|++.|+ ++.+++|+.++.+++.+.+............+   .......+       
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~---~~~~~~~~-------  192 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD---ARGIEDVI-------  192 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecC---HhHHHHHH-------
Confidence            356889999998 8999999999999995 69999999988888877765432211111122   12222222       


Q ss_pred             CCcccEEEecCCCC
Q 033396           89 DGKLNILVSSAQLP  102 (120)
Q Consensus        89 ~g~id~li~~ag~~  102 (120)
                       ...|++||+..+.
T Consensus       193 -~~~divINaTp~G  205 (283)
T PRK14027        193 -AAADGVVNATPMG  205 (283)
T ss_pred             -hhcCEEEEcCCCC
Confidence             3579999997543

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.78  E-value=0.00014  Score=52.30  Aligned_cols=78  Identities=17%  Similarity=0.145  Sum_probs=62.6

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      ..-++|-||+|.-|.-++++|+++|.+-.+.+|+..++..+-.+|   |...-.+.+.+  +..++..+        .+.
T Consensus         6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L---G~~~~~~p~~~--p~~~~~~~--------~~~   72 (382)
T COG3268           6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL---GPEAAVFPLGV--PAALEAMA--------SRT   72 (382)
T ss_pred             ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc---CccccccCCCC--HHHHHHHH--------hcc
Confidence            345889999999999999999999988899999999988777766   55555555555  56566555        568


Q ss_pred             cEEEecCCCCC
Q 033396           93 NILVSSAQLPY  103 (120)
Q Consensus        93 d~li~~ag~~~  103 (120)
                      ++|+||+|-..
T Consensus        73 ~VVlncvGPyt   83 (382)
T COG3268          73 QVVLNCVGPYT   83 (382)
T ss_pred             eEEEecccccc
Confidence            99999999865

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.72  E-value=0.00044  Score=47.39  Aligned_cols=75  Identities=17%  Similarity=0.220  Sum_probs=56.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHH-HHHHHhhcCCccc
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKL-METVSSQFDGKLN   93 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~~~~~~g~id   93 (120)
                      .++|.|+ |-+|..+|+.|.+.|++|+++++++...++....    ...++.+.+|.++++.+.++ +        ...|
T Consensus         2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~----~~~~~~v~gd~t~~~~L~~agi--------~~aD   68 (225)
T COG0569           2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD----ELDTHVVIGDATDEDVLEEAGI--------DDAD   68 (225)
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh----hcceEEEEecCCCHHHHHhcCC--------CcCC
Confidence            4666666 7899999999999999999999998876653321    13577888999998876655 2        4567


Q ss_pred             EEEecCCCC
Q 033396           94 ILVSSAQLP  102 (120)
Q Consensus        94 ~li~~ag~~  102 (120)
                      ++|-..|-.
T Consensus        69 ~vva~t~~d   77 (225)
T COG0569          69 AVVAATGND   77 (225)
T ss_pred             EEEEeeCCC
Confidence            777666653

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.71  E-value=0.00078  Score=48.89  Aligned_cols=82  Identities=13%  Similarity=0.280  Sum_probs=56.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCCh---------------------HHHHHHHHHHHhc--CCeEE
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE---------------------TELNQRIQEWKSK--GLQVS   65 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~---------------------~~~~~~~~~~~~~--~~~~~   65 (120)
                      .++++.++|.|+ |++|..+++.|+..|. ++.++|++.                     .+.+.+.+.+.+.  ...+.
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~   99 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV   99 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence            478889999998 7899999999999995 788888863                     2333444555544  45666


Q ss_pred             EEeccCCCHHHHHHHHHHHHhhcCCcccEEEecCCC
Q 033396           66 GNACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL  101 (120)
Q Consensus        66 ~~~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  101 (120)
                      .+..|++. +.++.++        ...|++|.+..-
T Consensus       100 ~~~~~~~~-~~~~~~~--------~~~DlVid~~D~  126 (338)
T PRK12475        100 PVVTDVTV-EELEELV--------KEVDLIIDATDN  126 (338)
T ss_pred             EEeccCCH-HHHHHHh--------cCCCEEEEcCCC
Confidence            66667753 3444443        457888777643

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=97.69  E-value=0.00049  Score=53.27  Aligned_cols=95  Identities=21%  Similarity=0.156  Sum_probs=69.8

Q ss_pred             ccccCcEEEEecCC-CchHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHh----cCCeEEEEeccCCCHHHHHHHHH
Q 033396            9 WSLKGMTALVTGGT-KGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWKS----KGLQVSGNACDLKIRAQREKLME   82 (120)
Q Consensus         9 ~~~~~~~~litGa~-~~ig~~~a~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   82 (120)
                      -.+.+++++|||++ ++|+.+++.+|+..|++|+.+.++. ....+..+.|..    .+....++..+..+-.+++.+++
T Consensus       392 ~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIe  471 (866)
T COG4982         392 GTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIE  471 (866)
T ss_pred             CCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHH
Confidence            35788999999987 5699999999999999999886654 344455555543    36777888889999888999987


Q ss_pred             HHHhh----cC---------CcccEEEecCCCCC
Q 033396           83 TVSSQ----FD---------GKLNILVSSAQLPY  103 (120)
Q Consensus        83 ~~~~~----~~---------g~id~li~~ag~~~  103 (120)
                      =+-..    .+         -.++.++..|....
T Consensus       472 wIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v  505 (866)
T COG4982         472 WIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRV  505 (866)
T ss_pred             HhccccccccCCcceecccccCcceeeecccCCc
Confidence            55331    10         13677888777655

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.68  E-value=0.00069  Score=48.87  Aligned_cols=80  Identities=23%  Similarity=0.317  Sum_probs=52.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC-c
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG-K   91 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g-~   91 (120)
                      +.++||+||+||+|...+......|+.++.+..++++.+ .   +.+.|.....   |..+.+    +.+++++..+| +
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~---~~~lGAd~vi---~y~~~~----~~~~v~~~t~g~g  211 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-L---LKELGADHVI---NYREED----FVEQVRELTGGKG  211 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-H---HHhcCCCEEE---cCCccc----HHHHHHHHcCCCC
Confidence            889999999999999999988889977666665554443 3   3334543332   233333    33333333323 6


Q ss_pred             ccEEEecCCCCC
Q 033396           92 LNILVSSAQLPY  103 (120)
Q Consensus        92 id~li~~ag~~~  103 (120)
                      +|+++...|-..
T Consensus       212 vDvv~D~vG~~~  223 (326)
T COG0604         212 VDVVLDTVGGDT  223 (326)
T ss_pred             ceEEEECCCHHH
Confidence            999999988655

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.68  E-value=0.00073  Score=49.60  Aligned_cols=77  Identities=18%  Similarity=0.258  Sum_probs=54.5

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      +.++.++|.|+ |.+|+..++.+...|++|+++++++...+.....+   +..+   ..+..+++.+.+.+        .
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~---g~~v---~~~~~~~~~l~~~l--------~  229 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF---GGRI---HTRYSNAYEIEDAV--------K  229 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc---Ccee---EeccCCHHHHHHHH--------c
Confidence            46677889988 78999999999999999999999876655443322   2222   23455555555444        4


Q ss_pred             cccEEEecCCCC
Q 033396           91 KLNILVSSAQLP  102 (120)
Q Consensus        91 ~id~li~~ag~~  102 (120)
                      ..|++|++++++
T Consensus       230 ~aDvVI~a~~~~  241 (370)
T TIGR00518       230 RADLLIGAVLIP  241 (370)
T ss_pred             cCCEEEEccccC
Confidence            679999998653

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.68  E-value=0.001  Score=46.98  Aligned_cols=81  Identities=23%  Similarity=0.352  Sum_probs=56.1

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+..++|+|+++++|.++++.+...|++|++++++....+.+ ..   .+...   ..|..+.+....+......   ++
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~---~~~~~---~~~~~~~~~~~~~~~~~~~---~~  235 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KE---LGADY---VIDYRKEDFVREVRELTGK---RG  235 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH---cCCCe---EEecCChHHHHHHHHHhCC---CC
Confidence            577899999999999999999999999999998887655433 22   23221   2355555544444433221   46


Q ss_pred             ccEEEecCCCC
Q 033396           92 LNILVSSAQLP  102 (120)
Q Consensus        92 id~li~~ag~~  102 (120)
                      +|++++++|..
T Consensus       236 ~d~~i~~~g~~  246 (342)
T cd08266         236 VDVVVEHVGAA  246 (342)
T ss_pred             CcEEEECCcHH
Confidence            89999998763

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.68  E-value=6.4e-05  Score=54.19  Aligned_cols=79  Identities=16%  Similarity=0.235  Sum_probs=47.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCC-------CEEEEeeCChHH--HHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHH
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFG-------AIVHTCSRNETE--LNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETV   84 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g-------~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (120)
                      -.++||||+|.+|..++..|+..+       ..|+++++++..  ++....++.....   ....|+....++...+   
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~---~~~~~~~~~~~~~~~l---   76 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAF---PLLKSVVATTDPEEAF---   76 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccc---cccCCceecCCHHHHh---
Confidence            358999999999999999999855       489999986532  2111111100000   0111332222222333   


Q ss_pred             HhhcCCcccEEEecCCCCC
Q 033396           85 SSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        85 ~~~~~g~id~li~~ag~~~  103 (120)
                           ...|+||++||...
T Consensus        77 -----~~aDiVI~tAG~~~   90 (325)
T cd01336          77 -----KDVDVAILVGAMPR   90 (325)
T ss_pred             -----CCCCEEEEeCCcCC
Confidence                 57999999999976

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.66  E-value=0.00013  Score=49.14  Aligned_cols=47  Identities=30%  Similarity=0.335  Sum_probs=40.1

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE   56 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~   56 (120)
                      .++++|+++|.|.+ .+|..+++.|.+.|++|++.++++...+...+.
T Consensus        24 ~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          24 DSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            45899999999995 899999999999999999999988766555443

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.65  E-value=0.00018  Score=55.10  Aligned_cols=47  Identities=23%  Similarity=0.219  Sum_probs=41.1

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW   57 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~   57 (120)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.+..+++.+++
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            477899999999 69999999999999999999999987777666554

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=97.64  E-value=0.0006  Score=47.63  Aligned_cols=81  Identities=22%  Similarity=0.360  Sum_probs=53.6

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+++++|+|+++++|..++..+...|++|++++++....+.. .++   +...   ..+..+.+...++. +....  ++
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~~~~~-~~~~~--~~  208 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL---GADV---AINYRTEDFAEEVK-EATGG--RG  208 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc---CCCE---EEeCCchhHHHHHH-HHhCC--CC
Confidence            578999999999999999999999999999998876654433 222   3221   23333333223222 22211  46


Q ss_pred             ccEEEecCCCC
Q 033396           92 LNILVSSAQLP  102 (120)
Q Consensus        92 id~li~~ag~~  102 (120)
                      +|.+++++|..
T Consensus       209 ~d~vi~~~g~~  219 (323)
T cd05276         209 VDVILDMVGGD  219 (323)
T ss_pred             eEEEEECCchH
Confidence            89999998753

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.63  E-value=0.00072  Score=47.91  Aligned_cols=79  Identities=18%  Similarity=0.246  Sum_probs=57.0

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +.+++.++|.|+ ||-+++++..|++.| .+++++.|+.++.+++.+.+...+..+..  .+..+.+..           
T Consensus       123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~--~~~~~~~~~-----------  188 (283)
T COG0169         123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEA--AALADLEGL-----------  188 (283)
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccc--ccccccccc-----------
Confidence            456889999998 889999999999999 57999999999988888887665542211  122221110           


Q ss_pred             CCcccEEEecCCCCC
Q 033396           89 DGKLNILVSSAQLPY  103 (120)
Q Consensus        89 ~g~id~li~~ag~~~  103 (120)
                       ...|++||+..+.-
T Consensus       189 -~~~dliINaTp~Gm  202 (283)
T COG0169         189 -EEADLLINATPVGM  202 (283)
T ss_pred             -cccCEEEECCCCCC
Confidence             13799999986543

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.61  E-value=0.00071  Score=47.36  Aligned_cols=81  Identities=16%  Similarity=0.259  Sum_probs=54.2

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+++++|+|+++++|.++++.+...|.+|++++++....+.+ .+   .+....   .|..+.+...++.+.. ..  .+
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~~~---~~~~~~~~~~~~~~~~-~~--~~  213 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV-RQ---AGADAV---FNYRAEDLADRILAAT-AG--QG  213 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH---cCCCEE---EeCCCcCHHHHHHHHc-CC--Cc
Confidence            578999999999999999999999999999998877654433 22   232211   3444433333332221 11  46


Q ss_pred             ccEEEecCCCC
Q 033396           92 LNILVSSAQLP  102 (120)
Q Consensus        92 id~li~~ag~~  102 (120)
                      +|.+++++|..
T Consensus       214 ~d~vi~~~~~~  224 (325)
T cd08253         214 VDVIIEVLANV  224 (325)
T ss_pred             eEEEEECCchH
Confidence            99999988653

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.59  E-value=0.00093  Score=47.86  Aligned_cols=81  Identities=15%  Similarity=0.219  Sum_probs=52.0

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .|.+++|+|+++++|..++......|++|+.+.++..+.+.+.+.+   |... +  .|..+.+++.+.+.+.   .+++
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l---Ga~~-v--i~~~~~~~~~~~i~~~---~~~g  221 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL---GFDD-A--FNYKEEPDLDAALKRY---FPNG  221 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCce-e--EEcCCcccHHHHHHHh---CCCC
Confidence            5789999999999999999888889999998888876654443322   3321 1  2222222233333322   1246


Q ss_pred             ccEEEecCCC
Q 033396           92 LNILVSSAQL  101 (120)
Q Consensus        92 id~li~~ag~  101 (120)
                      +|+++.+.|-
T Consensus       222 vd~v~d~~g~  231 (338)
T cd08295         222 IDIYFDNVGG  231 (338)
T ss_pred             cEEEEECCCH
Confidence            8888888764

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.58  E-value=0.0012  Score=46.62  Aligned_cols=76  Identities=25%  Similarity=0.343  Sum_probs=51.0

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+.+++|+|+++++|.++++.+...|.+|+.+.+++...+.+ .   ..+... .+  +..   ++.+.+    .+. .+
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~---~~~~~~-~~--~~~---~~~~~~----~~~-~~  226 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-K---ELGADY-VI--DGS---KFSEDV----KKL-GG  226 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-H---HcCCcE-EE--ecH---HHHHHH----Hhc-cC
Confidence            467899999999999999999999999999988877554433 2   223221 11  221   122222    223 46


Q ss_pred             ccEEEecCCCC
Q 033396           92 LNILVSSAQLP  102 (120)
Q Consensus        92 id~li~~ag~~  102 (120)
                      +|++++++|..
T Consensus       227 ~d~v~~~~g~~  237 (332)
T cd08259         227 ADVVIELVGSP  237 (332)
T ss_pred             CCEEEECCChH
Confidence            89999998764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.57  E-value=0.0012  Score=47.09  Aligned_cols=80  Identities=15%  Similarity=0.157  Sum_probs=51.8

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+.+++|+|+++++|..++......|++|+.+.+++.+.+.+ .   +.|....+   |..+.+.+.+.+....   +++
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~---~lGa~~vi---~~~~~~~~~~~~~~~~---~~g  207 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-K---KLGFDVAF---NYKTVKSLEETLKKAS---PDG  207 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-H---HcCCCEEE---eccccccHHHHHHHhC---CCC
Confidence            578999999999999999888888999999888877654433 2   23433222   2222222333333321   146


Q ss_pred             ccEEEecCCC
Q 033396           92 LNILVSSAQL  101 (120)
Q Consensus        92 id~li~~ag~  101 (120)
                      +|+++.+.|-
T Consensus       208 vdvv~d~~G~  217 (325)
T TIGR02825       208 YDCYFDNVGG  217 (325)
T ss_pred             eEEEEECCCH
Confidence            8888888774

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.57  E-value=0.001  Score=47.66  Aligned_cols=78  Identities=12%  Similarity=0.120  Sum_probs=50.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      .+++|+|+++++|..++......|+ +|+.+.+++++.+.+.+++   |.... +  |..++ ++.+.+.+.   .++++
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l---Ga~~v-i--~~~~~-~~~~~i~~~---~~~gv  225 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL---GFDAA-I--NYKTD-NVAERLREL---CPEGV  225 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc---CCcEE-E--ECCCC-CHHHHHHHH---CCCCc
Confidence            7999999999999999887777898 7999888876654443333   43222 2  22222 222223322   12468


Q ss_pred             cEEEecCCC
Q 033396           93 NILVSSAQL  101 (120)
Q Consensus        93 d~li~~ag~  101 (120)
                      |+++.++|.
T Consensus       226 d~vid~~g~  234 (345)
T cd08293         226 DVYFDNVGG  234 (345)
T ss_pred             eEEEECCCc
Confidence            999988774

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.54  E-value=0.0014  Score=47.43  Aligned_cols=81  Identities=14%  Similarity=0.198  Sum_probs=51.2

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+.+++|.|++|++|...+......|++|+.+++++.+.+.+..++   |....+   |..+.+.+.+.+.+.   .+++
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l---Ga~~vi---~~~~~~~~~~~i~~~---~~~g  228 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFDEAF---NYKEEPDLDAALKRY---FPEG  228 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc---CCCEEE---ECCCcccHHHHHHHH---CCCC
Confidence            5789999999999999998888889999998888776654333222   432221   222221222223222   1245


Q ss_pred             ccEEEecCCC
Q 033396           92 LNILVSSAQL  101 (120)
Q Consensus        92 id~li~~ag~  101 (120)
                      +|+++.++|-
T Consensus       229 vD~v~d~vG~  238 (348)
T PLN03154        229 IDIYFDNVGG  238 (348)
T ss_pred             cEEEEECCCH
Confidence            8888888774

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.52  E-value=0.001  Score=47.21  Aligned_cols=42  Identities=24%  Similarity=0.459  Sum_probs=37.0

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN   51 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~   51 (120)
                      .++.+++++|.|. |.+|+++++.|...|++|++++|++....
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~  188 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLA  188 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            3678999999999 67999999999999999999999876543

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.50  E-value=0.0026  Score=42.82  Aligned_cols=84  Identities=15%  Similarity=0.227  Sum_probs=54.4

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCCh-------------------HHHHHHHHHHHhcC--CeEEE
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE-------------------TELNQRIQEWKSKG--LQVSG   66 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~~~~~~--~~~~~   66 (120)
                      ..+.++.++|.|+ ||+|..+++.|+..|. ++.++|.+.                   .+.+...+.+++..  .++..
T Consensus        17 ~kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~   95 (202)
T TIGR02356        17 QRLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTA   95 (202)
T ss_pred             HHhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEE
Confidence            3478889999986 8999999999999995 799988762                   23334445555433  34444


Q ss_pred             EeccCCCHHHHHHHHHHHHhhcCCcccEEEecCCCC
Q 033396           67 NACDLKIRAQREKLMETVSSQFDGKLNILVSSAQLP  102 (120)
Q Consensus        67 ~~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  102 (120)
                      +...+++ +.+..++        .+.|++|.+..-.
T Consensus        96 ~~~~i~~-~~~~~~~--------~~~D~Vi~~~d~~  122 (202)
T TIGR02356        96 LKERVTA-ENLELLI--------NNVDLVLDCTDNF  122 (202)
T ss_pred             ehhcCCH-HHHHHHH--------hCCCEEEECCCCH
Confidence            4444432 3333333        4678888876443

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.49  E-value=0.0019  Score=45.87  Aligned_cols=81  Identities=19%  Similarity=0.206  Sum_probs=51.7

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCCh---HHHHHHHHHHHhcC-CeEEEEeccCCCHHHHHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE---TELNQRIQEWKSKG-LQVSGNACDLKIRAQREKLMETV   84 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~   84 (120)
                      ++++|+++|.|+ ||-+++++..|+..|+ +|.++.|+.   ++.+++.+.+.... ..+.+.  +..+...+..     
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~--~~~~~~~l~~-----  192 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVT--DLADQQAFAE-----  192 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEe--chhhhhhhhh-----
Confidence            468899999998 6669999999999995 799999984   35666666554322 112221  1111111111     


Q ss_pred             HhhcCCcccEEEecCCC
Q 033396           85 SSQFDGKLNILVSSAQL  101 (120)
Q Consensus        85 ~~~~~g~id~li~~ag~  101 (120)
                        .. ...|+|||+.-+
T Consensus       193 --~~-~~aDivINaTp~  206 (288)
T PRK12749        193 --AL-ASADILTNGTKV  206 (288)
T ss_pred             --hc-ccCCEEEECCCC
Confidence              22 568999998854

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.48  E-value=0.0012  Score=49.21  Aligned_cols=60  Identities=17%  Similarity=0.216  Sum_probs=44.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHH
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKL   80 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   80 (120)
                      .++|.|+ |.+|..+++.|.++|..|+++++++...+...+.     ..+.++.+|.+++..+.++
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~-----~~~~~~~gd~~~~~~l~~~   61 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR-----LDVRTVVGNGSSPDVLREA   61 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh-----cCEEEEEeCCCCHHHHHHc
Confidence            4788887 9999999999999999999999988765544321     1345666777776654443

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.48  E-value=0.0013  Score=49.01  Aligned_cols=75  Identities=23%  Similarity=0.318  Sum_probs=53.4

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ++.+++++|.|+ |.+|..+++.|...|+ +|++++|+..........+   +..       +.+.+++...+       
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~---g~~-------~~~~~~~~~~l-------  240 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF---GGE-------AIPLDELPEAL-------  240 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc---CCc-------EeeHHHHHHHh-------
Confidence            368899999987 9999999999999996 7999999987766555543   221       11122232233       


Q ss_pred             CCcccEEEecCCCCC
Q 033396           89 DGKLNILVSSAQLPY  103 (120)
Q Consensus        89 ~g~id~li~~ag~~~  103 (120)
                       ...|++|.+.|...
T Consensus       241 -~~aDvVI~aT~s~~  254 (423)
T PRK00045        241 -AEADIVISSTGAPH  254 (423)
T ss_pred             -ccCCEEEECCCCCC
Confidence             45788988887765

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=97.46  E-value=6.9e-05  Score=52.82  Aligned_cols=86  Identities=15%  Similarity=0.081  Sum_probs=62.0

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCC--CEEEEeeCCh-HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNE-TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      ++.+.++|||+.|.||..++..+...-  ++.+..+--. ..-....++.. ...+..++..|+.+...+..++.+    
T Consensus         4 ~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~-n~p~ykfv~~di~~~~~~~~~~~~----   78 (331)
T KOG0747|consen    4 YKEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVR-NSPNYKFVEGDIADADLVLYLFET----   78 (331)
T ss_pred             CccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhc-cCCCceEeeccccchHHHHhhhcc----
Confidence            455899999999999999999999865  4555544321 11111222221 246778999999999988888765    


Q ss_pred             cCCcccEEEecCCCCC
Q 033396           88 FDGKLNILVSSAQLPY  103 (120)
Q Consensus        88 ~~g~id~li~~ag~~~  103 (120)
                        .++|.|+|.|+-.+
T Consensus        79 --~~id~vihfaa~t~   92 (331)
T KOG0747|consen   79 --EEIDTVIHFAAQTH   92 (331)
T ss_pred             --CchhhhhhhHhhhh
Confidence              68999999998766

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.43  E-value=0.0006  Score=49.16  Aligned_cols=81  Identities=15%  Similarity=0.088  Sum_probs=52.6

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .+.+.+.|+|++|.+|..++..|+..+  .+++++|++....  ...++......  ....+.+++.++.+.+       
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g--~a~Dl~~~~~~--~~v~~~td~~~~~~~l-------   74 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPG--VAADLSHIDTP--AKVTGYADGELWEKAL-------   74 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcc--cccchhhcCcC--ceEEEecCCCchHHHh-------
Confidence            345589999999999999999999655  6799999843221  11122211112  2233555544434444       


Q ss_pred             CCcccEEEecCCCCC
Q 033396           89 DGKLNILVSSAQLPY  103 (120)
Q Consensus        89 ~g~id~li~~ag~~~  103 (120)
                       ...|++|+++|...
T Consensus        75 -~gaDvVVitaG~~~   88 (321)
T PTZ00325         75 -RGADLVLICAGVPR   88 (321)
T ss_pred             -CCCCEEEECCCCCC
Confidence             67899999999965

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=97.42  E-value=0.00099  Score=46.50  Aligned_cols=73  Identities=27%  Similarity=0.241  Sum_probs=56.9

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHH-HHHHHHHHh-----cCCeEEEEeccCCCHHHHHHHHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETEL-NQRIQEWKS-----KGLQVSGNACDLKIRAQREKLMETV   84 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~   84 (120)
                      ..|++||||=+|--|..+++.|++.|++|..+-|..... ...++.+-.     .++......+|++|...+.++++.+
T Consensus        27 ~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i  105 (376)
T KOG1372|consen   27 PRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI  105 (376)
T ss_pred             cceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc
Confidence            556999999999999999999999999999876644332 233444432     2677778889999999999998765

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.41  E-value=0.0011  Score=46.98  Aligned_cols=42  Identities=26%  Similarity=0.343  Sum_probs=36.5

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETEL   50 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~   50 (120)
                      .+++||.++|.|+++-.|++++..|.+.|++|.++.+....+
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~L  196 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQNL  196 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchhH
Confidence            357999999999988899999999999999999998854443

>PLN00106 malate dehydrogenase

Probab=97.40  E-value=0.00053  Score=49.45  Aligned_cols=80  Identities=14%  Similarity=0.128  Sum_probs=52.2

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ..+.+.|+|++|.+|..++..|+..+  .+++++|.++..  ....++........  ..++++.+++...+        
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~--g~a~Dl~~~~~~~~--i~~~~~~~d~~~~l--------   84 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTP--GVAADVSHINTPAQ--VRGFLGDDQLGDAL--------   84 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCC--eeEchhhhCCcCce--EEEEeCCCCHHHHc--------
Confidence            44689999999999999999999766  479999987721  11112221111211  22433333344444        


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                      ...|++|+.||...
T Consensus        85 ~~aDiVVitAG~~~   98 (323)
T PLN00106         85 KGADLVIIPAGVPR   98 (323)
T ss_pred             CCCCEEEEeCCCCC
Confidence            67999999999976

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.39  E-value=0.0007  Score=47.34  Aligned_cols=74  Identities=16%  Similarity=0.137  Sum_probs=51.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   94 (120)
                      .++|+||++- |+.++++|.+.|++|+.+.++....+...    ..+.  ..+..+.-+.+++.+++.+      .++|+
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~----~~g~--~~v~~g~l~~~~l~~~l~~------~~i~~   68 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP----IHQA--LTVHTGALDPQELREFLKR------HSIDI   68 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc----ccCC--ceEEECCCCHHHHHHHHHh------cCCCE
Confidence            5899999997 99999999999999998888764432111    1121  1233455666767777755      57898


Q ss_pred             EEecCCC
Q 033396           95 LVSSAQL  101 (120)
Q Consensus        95 li~~ag~  101 (120)
                      ||..+--
T Consensus        69 VIDAtHP   75 (256)
T TIGR00715        69 LVDATHP   75 (256)
T ss_pred             EEEcCCH
Confidence            8888744

This enzyme was found to be a monomer by gel filtration.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.39  E-value=0.0041  Score=45.20  Aligned_cols=82  Identities=17%  Similarity=0.262  Sum_probs=54.4

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCCh---------------------HHHHHHHHHHHhc--CCeEE
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE---------------------TELNQRIQEWKSK--GLQVS   65 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~---------------------~~~~~~~~~~~~~--~~~~~   65 (120)
                      .++.+.++|.|+ ||+|..+++.|+..|. ++.++|.+.                     .+.+...+.+.+.  ...+.
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~   99 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVE   99 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEE
Confidence            467888999998 8999999999999995 799998862                     2233333445443  34555


Q ss_pred             EEeccCCCHHHHHHHHHHHHhhcCCcccEEEecCCC
Q 033396           66 GNACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL  101 (120)
Q Consensus        66 ~~~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  101 (120)
                      .+..+++. +.+..++        .+.|++|.+..-
T Consensus       100 ~~~~~~~~-~~~~~~~--------~~~DlVid~~Dn  126 (339)
T PRK07688        100 AIVQDVTA-EELEELV--------TGVDLIIDATDN  126 (339)
T ss_pred             EEeccCCH-HHHHHHH--------cCCCEEEEcCCC
Confidence            55556653 3344443        456777776543

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.39  E-value=0.0038  Score=42.75  Aligned_cols=83  Identities=18%  Similarity=0.298  Sum_probs=54.6

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCC-------------------hHHHHHHHHHHHhcC--CeEEEE
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRN-------------------ETELNQRIQEWKSKG--LQVSGN   67 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~~~~~~--~~~~~~   67 (120)
                      .+..++++|.|+ ||+|..+++.|+..|. ++.++|.+                   ..+.+.+.+.+++..  .++..+
T Consensus        18 ~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~   96 (228)
T cd00757          18 KLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY   96 (228)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            477888999986 8999999999999994 67777543                   123444555565543  455555


Q ss_pred             eccCCCHHHHHHHHHHHHhhcCCcccEEEecCCCC
Q 033396           68 ACDLKIRAQREKLMETVSSQFDGKLNILVSSAQLP  102 (120)
Q Consensus        68 ~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  102 (120)
                      ..+++ ++.+..++        .+.|++|.+..-.
T Consensus        97 ~~~i~-~~~~~~~~--------~~~DvVi~~~d~~  122 (228)
T cd00757          97 NERLD-AENAEELI--------AGYDLVLDCTDNF  122 (228)
T ss_pred             cceeC-HHHHHHHH--------hCCCEEEEcCCCH
Confidence            55553 33344444        4578888876543

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.37  E-value=0.0028  Score=46.61  Aligned_cols=83  Identities=19%  Similarity=0.258  Sum_probs=54.7

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCC-------------------hHHHHHHHHHHHhcC--CeEEEE
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRN-------------------ETELNQRIQEWKSKG--LQVSGN   67 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~~~~~~--~~~~~~   67 (120)
                      .++++.++|.|+ ||+|..+++.|+..|. ++.++|++                   ..+.+.+.+.+.+..  .++..+
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  210 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV  210 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            367788888876 8999999999999995 68888886                   234455555565543  344444


Q ss_pred             eccCCCHHHHHHHHHHHHhhcCCcccEEEecCCCC
Q 033396           68 ACDLKIRAQREKLMETVSSQFDGKLNILVSSAQLP  102 (120)
Q Consensus        68 ~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  102 (120)
                      ...+++ +.+..++        ...|++|++..-.
T Consensus       211 ~~~~~~-~~~~~~~--------~~~D~Vv~~~d~~  236 (376)
T PRK08762        211 QERVTS-DNVEALL--------QDVDVVVDGADNF  236 (376)
T ss_pred             eccCCh-HHHHHHH--------hCCCEEEECCCCH
Confidence            444432 3334344        4578888887653

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=97.37  E-value=0.002  Score=45.16  Aligned_cols=80  Identities=20%  Similarity=0.324  Sum_probs=51.7

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+++++|+|+++++|.+++..+...|++|+.+.+++...+.. .+   .+....   .+....+....+. +....  .+
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~~~---~~~~~~~~~~~~~-~~~~~--~~  208 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EA---LGADIA---INYREEDFVEVVK-AETGG--KG  208 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH---cCCcEE---EecCchhHHHHHH-HHcCC--CC
Confidence            578999999999999999999999999999998877655422 22   232211   2233333222222 21111  35


Q ss_pred             ccEEEecCCC
Q 033396           92 LNILVSSAQL  101 (120)
Q Consensus        92 id~li~~ag~  101 (120)
                      +|.+++++|-
T Consensus       209 ~d~~i~~~~~  218 (325)
T TIGR02824       209 VDVILDIVGG  218 (325)
T ss_pred             eEEEEECCch
Confidence            9999998774

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=97.36  E-value=0.00088  Score=49.63  Aligned_cols=46  Identities=30%  Similarity=0.338  Sum_probs=40.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQ   55 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~   55 (120)
                      +.+...++|+||+|.+|+-+++.|.++|..|..+-|+....++...
T Consensus        76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~  121 (411)
T KOG1203|consen   76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG  121 (411)
T ss_pred             CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc
Confidence            4677899999999999999999999999999999999877655544

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.36  E-value=0.0056  Score=42.49  Aligned_cols=36  Identities=33%  Similarity=0.410  Sum_probs=31.0

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRN   46 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~   46 (120)
                      .++.+.++|.|+ ||+|..+++.|+..| .++.++|.+
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            367889999998 999999999999999 568877664

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.33  E-value=0.0046  Score=38.82  Aligned_cols=80  Identities=15%  Similarity=0.267  Sum_probs=55.1

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCCh-------------------HHHHHHHHHHHhc--CCeEEEEecc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE-------------------TELNQRIQEWKSK--GLQVSGNACD   70 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~~~~~--~~~~~~~~~D   70 (120)
                      .++++|.|+ |++|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+.+.  ..++..+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            467888887 8999999999999995 688887641                   1234445555554  5677777777


Q ss_pred             CCCHHHHHHHHHHHHhhcCCcccEEEecCCCC
Q 033396           71 LKIRAQREKLMETVSSQFDGKLNILVSSAQLP  102 (120)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  102 (120)
                      ++ ++....++        .+.|++|.+..-.
T Consensus        81 ~~-~~~~~~~~--------~~~d~vi~~~d~~  103 (135)
T PF00899_consen   81 ID-EENIEELL--------KDYDIVIDCVDSL  103 (135)
T ss_dssp             CS-HHHHHHHH--------HTSSEEEEESSSH
T ss_pred             cc-cccccccc--------cCCCEEEEecCCH
Confidence            73 34455555        3579999887653

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PLN00203 glutamyl-tRNA reductase

Probab=97.33  E-value=0.0029  Score=48.47  Aligned_cols=78  Identities=15%  Similarity=0.195  Sum_probs=55.4

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      +.++.++|.|+ |.+|..+++.|...|+ +|+++.|+....+.+.+++.  +..+.+     ...++....+        
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~--g~~i~~-----~~~~dl~~al--------  327 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP--DVEIIY-----KPLDEMLACA--------  327 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC--CCceEe-----ecHhhHHHHH--------
Confidence            67899999999 9999999999999996 69999999888776665542  222221     1112233333        


Q ss_pred             CcccEEEecCCCCCc
Q 033396           90 GKLNILVSSAQLPYS  104 (120)
Q Consensus        90 g~id~li~~ag~~~~  104 (120)
                      ...|+||.+.+...+
T Consensus       328 ~~aDVVIsAT~s~~p  342 (519)
T PLN00203        328 AEADVVFTSTSSETP  342 (519)
T ss_pred             hcCCEEEEccCCCCC
Confidence            467999988876663

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=97.31  E-value=0.0031  Score=44.73  Aligned_cols=40  Identities=23%  Similarity=0.356  Sum_probs=34.4

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN   51 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~   51 (120)
                      .+.+++|+|+++++|..++......|++|+.+.+++.+.+
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~  182 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVA  182 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            5789999999999999998888889999998888776543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=97.31  E-value=0.0028  Score=47.28  Aligned_cols=75  Identities=25%  Similarity=0.327  Sum_probs=53.6

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .+.+++++|.|+ |.+|..+++.|...| .+|++++|+.....+..+.+   +..  .+.     .+++...+       
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~---g~~--~i~-----~~~l~~~l-------  238 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL---GGE--AVK-----FEDLEEYL-------  238 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc---CCe--Eee-----HHHHHHHH-------
Confidence            377899999997 999999999999999 78999999987765555443   221  111     12333333       


Q ss_pred             CCcccEEEecCCCCC
Q 033396           89 DGKLNILVSSAQLPY  103 (120)
Q Consensus        89 ~g~id~li~~ag~~~  103 (120)
                       ...|++|.+.+...
T Consensus       239 -~~aDvVi~aT~s~~  252 (417)
T TIGR01035       239 -AEADIVISSTGAPH  252 (417)
T ss_pred             -hhCCEEEECCCCCC
Confidence             45789998887665

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=97.27  E-value=0.0033  Score=46.77  Aligned_cols=75  Identities=19%  Similarity=0.262  Sum_probs=59.4

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      +++++++|.|+ |-+|...+++|.+.| ..|+++.|+....+++..++.          .++...+++...+        
T Consensus       176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~----------~~~~~l~el~~~l--------  236 (414)
T COG0373         176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG----------AEAVALEELLEAL--------  236 (414)
T ss_pred             cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC----------CeeecHHHHHHhh--------
Confidence            78999999998 779999999999999 779999999999888887763          2233334444444        


Q ss_pred             CcccEEEecCCCCCc
Q 033396           90 GKLNILVSSAQLPYS  104 (120)
Q Consensus        90 g~id~li~~ag~~~~  104 (120)
                      ...|++|.+.|-+.+
T Consensus       237 ~~~DvVissTsa~~~  251 (414)
T COG0373         237 AEADVVISSTSAPHP  251 (414)
T ss_pred             hhCCEEEEecCCCcc
Confidence            678999999888774

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.27  E-value=0.0013  Score=43.25  Aligned_cols=46  Identities=22%  Similarity=0.367  Sum_probs=39.0

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQ   55 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~   55 (120)
                      ++++|.++|.|++.-.|..+++.|.+.|++|.++.|+.+++.+...
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~~l~   86 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLKEHTK   86 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHHHHHh
Confidence            5899999999997778999999999999999999998765544443

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.24  E-value=0.004  Score=43.66  Aligned_cols=80  Identities=14%  Similarity=0.161  Sum_probs=51.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+++++|+|+++++|.+++..+...|++++.++++....+.+ .+   .+.. ..+  +........++.+.. ..  .+
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~---~g~~-~~~--~~~~~~~~~~~~~~~-~~--~~  213 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LA---LGAA-HVI--VTDEEDLVAEVLRIT-GG--KG  213 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HH---cCCC-EEE--ecCCccHHHHHHHHh-CC--CC
Confidence            577899999999999999999999999999998887655433 22   2321 122  222222222222221 11  35


Q ss_pred             ccEEEecCCC
Q 033396           92 LNILVSSAQL  101 (120)
Q Consensus        92 id~li~~ag~  101 (120)
                      +|.+++++|-
T Consensus       214 ~d~vi~~~~~  223 (328)
T cd08268         214 VDVVFDPVGG  223 (328)
T ss_pred             ceEEEECCch
Confidence            8999998765

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=97.23  E-value=0.0043  Score=43.97  Aligned_cols=80  Identities=15%  Similarity=0.224  Sum_probs=50.9

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+.+++|.|+++++|.+++..+...|++|+.+.++..+.+...+.+   +.. .++  +..+.+..++ +.+..   +++
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~---g~~-~~~--~~~~~~~~~~-v~~~~---~~~  214 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEEL---GFD-AAI--NYKTPDLAEA-LKEAA---PDG  214 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhc---CCc-eEE--ecCChhHHHH-HHHhc---cCC
Confidence            5679999999999999999999999999999988776554332212   321 111  2223222222 22221   246


Q ss_pred             ccEEEecCCC
Q 033396           92 LNILVSSAQL  101 (120)
Q Consensus        92 id~li~~ag~  101 (120)
                      +|+++.++|-
T Consensus       215 ~d~vi~~~g~  224 (329)
T cd05288         215 IDVYFDNVGG  224 (329)
T ss_pred             ceEEEEcchH
Confidence            8888888764

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.22  E-value=0.0031  Score=51.83  Aligned_cols=79  Identities=14%  Similarity=0.133  Sum_probs=60.9

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCC-CE-------------EEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFG-AI-------------VHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQR   77 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g-~~-------------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   77 (120)
                      +.|.++|.|+ |.+|...++.|++.. +.             |.+++++....+++.+.+    ..+..+..|++|.+++
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~----~~~~~v~lDv~D~e~L  642 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI----ENAEAVQLDVSDSESL  642 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc----CCCceEEeecCCHHHH
Confidence            4668999997 999999999998854 33             788888877766655543    2356788999999888


Q ss_pred             HHHHHHHHhhcCCcccEEEecCCCCC
Q 033396           78 EKLMETVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        78 ~~~~~~~~~~~~g~id~li~~ag~~~  103 (120)
                      .+++        .++|+||++.....
T Consensus       643 ~~~v--------~~~DaVIsalP~~~  660 (1042)
T PLN02819        643 LKYV--------SQVDVVISLLPASC  660 (1042)
T ss_pred             HHhh--------cCCCEEEECCCchh
Confidence            7777        45899999987644

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=97.21  E-value=0.0014  Score=45.16  Aligned_cols=63  Identities=27%  Similarity=0.243  Sum_probs=46.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCC---EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGA---IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~---~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      +.++|||++|-.|.++.+.+..+|.   +.++.++                     -.+|+++.++.+.++++      .
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s---------------------kd~DLt~~a~t~~lF~~------e   54 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS---------------------KDADLTNLADTRALFES------E   54 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc---------------------ccccccchHHHHHHHhc------c
Confidence            6799999999999999999999884   2333332                     23788998888888876      3


Q ss_pred             cccEEEecCCCCC
Q 033396           91 KLNILVSSAQLPY  103 (120)
Q Consensus        91 ~id~li~~ag~~~  103 (120)
                      ++-.||+.|++.+
T Consensus        55 kPthVIhlAAmVG   67 (315)
T KOG1431|consen   55 KPTHVIHLAAMVG   67 (315)
T ss_pred             CCceeeehHhhhc
Confidence            5566666665543

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.21  E-value=0.0087  Score=40.69  Aligned_cols=36  Identities=22%  Similarity=0.313  Sum_probs=31.2

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRN   46 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~   46 (120)
                      .++.+.++|.|+ ||+|..+++.|+..|. +++++|.+
T Consensus        25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            467888999997 8999999999999995 58888876

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.21  E-value=0.006  Score=41.64  Aligned_cols=79  Identities=24%  Similarity=0.249  Sum_probs=52.2

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      ..+.+++|+|+++ +|.+++..+...|.+|+.+++++...+.+ .+   .+... .  .|..+.....++.   .... +
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~~-~--~~~~~~~~~~~~~---~~~~-~  200 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KE---LGADH-V--IDYKEEDLEEELR---LTGG-G  200 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HH---hCCce-e--ccCCcCCHHHHHH---HhcC-C
Confidence            3577899999988 99999998888999999999887554333 22   23221 1  2333333333332   1122 5


Q ss_pred             cccEEEecCCC
Q 033396           91 KLNILVSSAQL  101 (120)
Q Consensus        91 ~id~li~~ag~  101 (120)
                      ++|+++++++.
T Consensus       201 ~~d~vi~~~~~  211 (271)
T cd05188         201 GADVVIDAVGG  211 (271)
T ss_pred             CCCEEEECCCC
Confidence            79999999886

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.20  E-value=0.0042  Score=44.55  Aligned_cols=75  Identities=24%  Similarity=0.309  Sum_probs=52.0

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      +.+++++|.|+ |.+|..+++.|...| .+|++++|++....+...++   +..  .+     +.+++...+        
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~---g~~--~~-----~~~~~~~~l--------  236 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL---GGN--AV-----PLDELLELL--------  236 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc---CCe--EE-----eHHHHHHHH--------
Confidence            57899999988 999999999999866 67999999987766665554   221  11     122233333        


Q ss_pred             CcccEEEecCCCCCc
Q 033396           90 GKLNILVSSAQLPYS  104 (120)
Q Consensus        90 g~id~li~~ag~~~~  104 (120)
                      ...|++|.+.+....
T Consensus       237 ~~aDvVi~at~~~~~  251 (311)
T cd05213         237 NEADVVISATGAPHY  251 (311)
T ss_pred             hcCCEEEECCCCCch
Confidence            346888888876653

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.20  E-value=0.0037  Score=46.74  Aligned_cols=78  Identities=22%  Similarity=0.167  Sum_probs=51.6

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      +.+|.++|+|.+ +.|.+.++.|+++|+.|.+.+......  ...+++.....+.+...... ..    .+        .
T Consensus         3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~--~~~~l~~~~~gi~~~~g~~~-~~----~~--------~   66 (445)
T PRK04308          3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPE--RVAQIGKMFDGLVFYTGRLK-DA----LD--------N   66 (445)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCch--hHHHHhhccCCcEEEeCCCC-HH----HH--------h
Confidence            568899999985 899999999999999999998765321  12233332112333333221 11    12        3


Q ss_pred             cccEEEecCCCCCc
Q 033396           91 KLNILVSSAQLPYS  104 (120)
Q Consensus        91 ~id~li~~ag~~~~  104 (120)
                      ..|.||...|+...
T Consensus        67 ~~d~vv~spgi~~~   80 (445)
T PRK04308         67 GFDILALSPGISER   80 (445)
T ss_pred             CCCEEEECCCCCCC
Confidence            57999999999874

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.17  E-value=0.0062  Score=44.42  Aligned_cols=81  Identities=21%  Similarity=0.302  Sum_probs=52.2

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      -.|+.+||.||++|+|.+.+.-....+ .+|+.+.+. +.. ++.+   ..|....   .|..+++    +.+++++..+
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~-e~~-~l~k---~lGAd~v---vdy~~~~----~~e~~kk~~~  223 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSK-EKL-ELVK---KLGADEV---VDYKDEN----VVELIKKYTG  223 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEccc-chH-HHHH---HcCCcEe---ecCCCHH----HHHHHHhhcC
Confidence            468899999999999999998888888 444444433 332 1222   2353322   4666644    3333333212


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                      +++|+|+-|.|-..
T Consensus       224 ~~~DvVlD~vg~~~  237 (347)
T KOG1198|consen  224 KGVDVVLDCVGGST  237 (347)
T ss_pred             CCccEEEECCCCCc
Confidence            78999999999855

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.17  E-value=0.0091  Score=43.65  Aligned_cols=82  Identities=13%  Similarity=0.176  Sum_probs=55.4

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCCh-------------------HHHHHHHHHHHhcC--CeEEEE
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNE-------------------TELNQRIQEWKSKG--LQVSGN   67 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~-------------------~~~~~~~~~~~~~~--~~~~~~   67 (120)
                      .++.++++|.|+ ||+|..+++.|+..| .++.++|.+.                   .+.+...+.+.+..  .++..+
T Consensus        25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~  103 (355)
T PRK05597         25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVS  103 (355)
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEE
Confidence            478889999988 899999999999999 5688887652                   23445555665543  445555


Q ss_pred             eccCCCHHHHHHHHHHHHhhcCCcccEEEecCCC
Q 033396           68 ACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL  101 (120)
Q Consensus        68 ~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  101 (120)
                      ...++. +....++        ...|++|.+..-
T Consensus       104 ~~~i~~-~~~~~~~--------~~~DvVvd~~d~  128 (355)
T PRK05597        104 VRRLTW-SNALDEL--------RDADVILDGSDN  128 (355)
T ss_pred             EeecCH-HHHHHHH--------hCCCEEEECCCC
Confidence            555543 3333333        457888887654

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.15  E-value=0.0056  Score=43.64  Aligned_cols=40  Identities=30%  Similarity=0.433  Sum_probs=35.4

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETEL   50 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~   50 (120)
                      .+.+++++|.|. |.+|+.+++.|...|++|++++|++...
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~  188 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHL  188 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            467999999998 6799999999999999999999986553

>PRK08223 hypothetical protein; Validated

Probab=97.14  E-value=0.0065  Score=43.18  Aligned_cols=82  Identities=11%  Similarity=0.180  Sum_probs=53.7

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCCh-------------------HHHHHHHHHHHhc--CCeEEEE
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNE-------------------TELNQRIQEWKSK--GLQVSGN   67 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~-------------------~~~~~~~~~~~~~--~~~~~~~   67 (120)
                      .++...++|.|+ ||+|..+++.|+..| -++.++|.+.                   .+.+...+.+.+.  ..++..+
T Consensus        24 kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~  102 (287)
T PRK08223         24 RLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAF  102 (287)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            467888999988 899999999999999 5688777651                   2233444455544  3455555


Q ss_pred             eccCCCHHHHHHHHHHHHhhcCCcccEEEecCCC
Q 033396           68 ACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL  101 (120)
Q Consensus        68 ~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  101 (120)
                      ...++. +....++        .+.|++|.+.-.
T Consensus       103 ~~~l~~-~n~~~ll--------~~~DlVvD~~D~  127 (287)
T PRK08223        103 PEGIGK-ENADAFL--------DGVDVYVDGLDF  127 (287)
T ss_pred             ecccCc-cCHHHHH--------hCCCEEEECCCC
Confidence            555553 3344444        457888766543

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.13  E-value=0.0043  Score=37.65  Aligned_cols=58  Identities=21%  Similarity=0.192  Sum_probs=43.0

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHH
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKL   80 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   80 (120)
                      ++|.|. +.+|..+++.|.+.+.+|+++++++...+...+    .+  +.++.+|.++++.++++
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~----~~--~~~i~gd~~~~~~l~~a   58 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELRE----EG--VEVIYGDATDPEVLERA   58 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH----TT--SEEEES-TTSHHHHHHT
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHh----cc--cccccccchhhhHHhhc
Confidence            466776 579999999999977799999999877544433    34  56788999998876554

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=97.12  E-value=0.011  Score=41.03  Aligned_cols=36  Identities=31%  Similarity=0.376  Sum_probs=30.4

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRN   46 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~   46 (120)
                      .++++.++|.|+ ||+|..+++.|+..| -++.++|.+
T Consensus        21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D   57 (240)
T TIGR02355        21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFD   57 (240)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            467888999987 899999999999999 568877764

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=97.12  E-value=0.0089  Score=43.42  Aligned_cols=73  Identities=21%  Similarity=0.214  Sum_probs=49.3

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .|++++|+|.+ |+|...++.....|++|+.+++++.+++...+    .|....+   +.++++..+.+-        +.
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~----lGAd~~i---~~~~~~~~~~~~--------~~  229 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK----LGADHVI---NSSDSDALEAVK--------EI  229 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH----hCCcEEE---EcCCchhhHHhH--------hh
Confidence            58899999998 99988777777799999999999887654432    2443332   222444333322        12


Q ss_pred             ccEEEecCC
Q 033396           92 LNILVSSAQ  100 (120)
Q Consensus        92 id~li~~ag  100 (120)
                      +|++|.+++
T Consensus       230 ~d~ii~tv~  238 (339)
T COG1064         230 ADAIIDTVG  238 (339)
T ss_pred             CcEEEECCC
Confidence            677777777

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.12  E-value=0.012  Score=37.46  Aligned_cols=74  Identities=16%  Similarity=0.153  Sum_probs=52.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhc----CCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           15 TALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKSK----GLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .+.|+|++|.+|..++..|...+  .+++++|+++..++....+++..    ..+.....   .+.+    .+       
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~----~~-------   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYE----AL-------   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGG----GG-------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---cccc----cc-------
Confidence            47899999999999999999987  67999999987665555554431    22232222   2222    12       


Q ss_pred             CCcccEEEecCCCCC
Q 033396           89 DGKLNILVSSAQLPY  103 (120)
Q Consensus        89 ~g~id~li~~ag~~~  103 (120)
                       ...|++|..+|.+.
T Consensus        68 -~~aDivvitag~~~   81 (141)
T PF00056_consen   68 -KDADIVVITAGVPR   81 (141)
T ss_dssp             -TTESEEEETTSTSS
T ss_pred             -ccccEEEEeccccc
Confidence             57899999999875

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd00704 MDH Malate dehydrogenase

Probab=97.11  E-value=0.0018  Score=46.78  Aligned_cols=74  Identities=20%  Similarity=0.288  Sum_probs=47.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC-C------EEEEeeCCh--HHHHHHHHHHHhcCCeEEEEeccCCCHH--HHH--HHH
Q 033396           15 TALVTGGTKGIGYAVVEELAAFG-A------IVHTCSRNE--TELNQRIQEWKSKGLQVSGNACDLKIRA--QRE--KLM   81 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g-~------~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~--~~~--~~~   81 (120)
                      .+.|+||+|.+|..++..|+..+ +      .+++.|+++  +.++              ....|+.+..  ...  .+-
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~--------------g~~~Dl~d~~~~~~~~~~i~   67 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALE--------------GVVMELQDCAFPLLKGVVIT   67 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccc--------------eeeeehhhhcccccCCcEEe
Confidence            47899999999999999999866 2      499999876  3221              2223343331  000  000


Q ss_pred             HHHHhhcCCcccEEEecCCCCC
Q 033396           82 ETVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        82 ~~~~~~~~g~id~li~~ag~~~  103 (120)
                      ....+.+ ...|++|+.||.+.
T Consensus        68 ~~~~~~~-~~aDiVVitAG~~~   88 (323)
T cd00704          68 TDPEEAF-KDVDVAILVGAFPR   88 (323)
T ss_pred             cChHHHh-CCCCEEEEeCCCCC
Confidence            1112233 67999999999976

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.11  E-value=0.015  Score=44.46  Aligned_cols=85  Identities=21%  Similarity=0.252  Sum_probs=55.8

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCH-------------HHH
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR-------------AQR   77 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-------------~~~   77 (120)
                      ..+.+++|.|+ |.+|...+......|+.|+.+|+++..++...    ..|.....+  |..+.             +..
T Consensus       163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae----slGA~~v~i--~~~e~~~~~~gya~~~s~~~~  235 (509)
T PRK09424        163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE----SMGAEFLEL--DFEEEGGSGDGYAKVMSEEFI  235 (509)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HcCCeEEEe--ccccccccccchhhhcchhHH
Confidence            46889999998 88999999999999999999999887665332    235543322  22211             111


Q ss_pred             HHHHHHHHhhcCCcccEEEecCCCCC
Q 033396           78 EKLMETVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        78 ~~~~~~~~~~~~g~id~li~~ag~~~  103 (120)
                      ++..+...+.. +..|++|.++|.+.
T Consensus       236 ~~~~~~~~~~~-~gaDVVIetag~pg  260 (509)
T PRK09424        236 KAEMALFAEQA-KEVDIIITTALIPG  260 (509)
T ss_pred             HHHHHHHHhcc-CCCCEEEECCCCCc
Confidence            22222223333 56999999999854

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=97.08  E-value=0.0042  Score=47.04  Aligned_cols=80  Identities=23%  Similarity=0.205  Sum_probs=55.2

Q ss_pred             cccCcEEEEecCC----------------CchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCC
Q 033396           10 SLKGMTALVTGGT----------------KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKI   73 (120)
Q Consensus        10 ~~~~~~~litGa~----------------~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   73 (120)
                      +++||.++||+|.                |-.|.++|+.+..+|++|.++.-... +       . ....+..+  ++.+
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~-------~-~p~~v~~i--~V~t  321 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-L-------A-DPQGVKVI--HVES  321 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-C-------C-CCCCceEE--EecC
Confidence            4899999999875                55999999999999999999874321 1       0 12223443  3444


Q ss_pred             HHHHHHHHHHHHhhcCCcccEEEecCCCCCcc
Q 033396           74 RAQREKLMETVSSQFDGKLNILVSSAQLPYSQ  105 (120)
Q Consensus        74 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  105 (120)
                      ..++.+.+   .+.+  +.|++|.+|++.++.
T Consensus       322 a~eM~~av---~~~~--~~Di~I~aAAVaDyr  348 (475)
T PRK13982        322 ARQMLAAV---EAAL--PADIAIFAAAVADWR  348 (475)
T ss_pred             HHHHHHHH---HhhC--CCCEEEEecccccee
Confidence            45544444   4444  369999999998863

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=97.08  E-value=0.0023  Score=48.46  Aligned_cols=46  Identities=20%  Similarity=0.260  Sum_probs=39.4

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE   56 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~   56 (120)
                      .+++++++|+|+ ||+|++++..|++.|++|++++|+..+.++..+.
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~  374 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR  374 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            467899999996 7999999999999999999999988776655544

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=97.04  E-value=0.013  Score=43.12  Aligned_cols=82  Identities=16%  Similarity=0.314  Sum_probs=53.8

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCCh-------------------HHHHHHHHHHHhc--CCeEEEE
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNE-------------------TELNQRIQEWKSK--GLQVSGN   67 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~-------------------~~~~~~~~~~~~~--~~~~~~~   67 (120)
                      .++.+.++|.|+ ||+|..+++.|+..| .++.++|.+.                   .+.+.+.+.+.+.  ..++..+
T Consensus        38 ~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~  116 (370)
T PRK05600         38 RLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNAL  116 (370)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEe
Confidence            367788999988 899999999999999 5788887751                   2333444455544  3455555


Q ss_pred             eccCCCHHHHHHHHHHHHhhcCCcccEEEecCCC
Q 033396           68 ACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL  101 (120)
Q Consensus        68 ~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  101 (120)
                      ...++ ++....++        ...|++|.|.--
T Consensus       117 ~~~i~-~~~~~~~~--------~~~DlVid~~Dn  141 (370)
T PRK05600        117 RERLT-AENAVELL--------NGVDLVLDGSDS  141 (370)
T ss_pred             eeecC-HHHHHHHH--------hCCCEEEECCCC
Confidence            55554 23344444        456777777644

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=97.02  E-value=0.01  Score=42.69  Aligned_cols=77  Identities=17%  Similarity=0.270  Sum_probs=50.1

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .+.+++|+|+ |++|...+..+...|+ +|+.+++++.+++.+ .+   .|....   .|..+. ++.++.    +.. +
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~---lGa~~v---i~~~~~-~~~~~~----~~~-g  234 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-RE---MGADKL---VNPQND-DLDHYK----AEK-G  234 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HH---cCCcEE---ecCCcc-cHHHHh----ccC-C
Confidence            5789999986 8999999888888897 588888887665432 22   354322   233332 222222    222 5


Q ss_pred             cccEEEecCCCC
Q 033396           91 KLNILVSSAQLP  102 (120)
Q Consensus        91 ~id~li~~ag~~  102 (120)
                      .+|++|.++|..
T Consensus       235 ~~D~vid~~G~~  246 (343)
T PRK09880        235 YFDVSFEVSGHP  246 (343)
T ss_pred             CCCEEEECCCCH
Confidence            689999999863

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=97.01  E-value=0.017  Score=38.06  Aligned_cols=31  Identities=19%  Similarity=0.252  Sum_probs=26.4

Q ss_pred             EEEecCCCchHHHHHHHHHHCCC-EEEEeeCCh
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE   47 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~   47 (120)
                      ++|.|+ ||+|..+++.|++.|. ++.++|.+.
T Consensus         2 VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           2 VGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            567776 8999999999999996 599988764

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=97.00  E-value=0.022  Score=38.36  Aligned_cols=36  Identities=25%  Similarity=0.272  Sum_probs=31.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRN   46 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~   46 (120)
                      .++.+.++|.|+ ||+|..++..|++.|. +++++|.+
T Consensus        18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            467888999998 8899999999999996 69998887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK08328 hypothetical protein; Provisional

Probab=97.00  E-value=0.021  Score=39.31  Aligned_cols=36  Identities=31%  Similarity=0.318  Sum_probs=30.6

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRN   46 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~   46 (120)
                      .+++++++|.|+ ||+|.++++.|+..| .+++++|.+
T Consensus        24 ~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D   60 (231)
T PRK08328         24 KLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQ   60 (231)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            467788999988 799999999999999 568888754

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=96.98  E-value=0.0091  Score=42.24  Aligned_cols=42  Identities=29%  Similarity=0.317  Sum_probs=35.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR   53 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~   53 (120)
                      .+.+++|.|+++++|.+++......|++|+.+.+++++.+..
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL  187 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            357999999999999999998888999999998887665433

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.97  E-value=0.0094  Score=42.64  Aligned_cols=79  Identities=15%  Similarity=0.169  Sum_probs=50.1

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCE-EEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .+.+++|+|+ |++|..++..+...|++ |+.+++++.+.+.+ .++   +....   .|..+.+ .+++. +....  .
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~---ga~~~---i~~~~~~-~~~~~-~~~~~--~  230 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL---GADFV---INSGQDD-VQEIR-ELTSG--A  230 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh---CCCEE---EcCCcch-HHHHH-HHhCC--C
Confidence            4789999986 89999999988889988 98888877665432 333   43221   2333322 22222 21111  3


Q ss_pred             cccEEEecCCCC
Q 033396           91 KLNILVSSAQLP  102 (120)
Q Consensus        91 ~id~li~~ag~~  102 (120)
                      ++|++|.+.|..
T Consensus       231 ~~d~vid~~g~~  242 (339)
T cd08239         231 GADVAIECSGNT  242 (339)
T ss_pred             CCCEEEECCCCH
Confidence            689999888754

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.97  E-value=0.008  Score=44.85  Aligned_cols=63  Identities=19%  Similarity=0.122  Sum_probs=47.9

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHH
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQRE   78 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   78 (120)
                      ...+.++|.|+ |.+|..+++.|.+.|.+|++++++++..+...++    +..+.++.+|.++++.+.
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~----~~~~~~i~gd~~~~~~L~  291 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE----LPNTLVLHGDGTDQELLE  291 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----CCCCeEEECCCCCHHHHH
Confidence            34678999999 9999999999999999999999998765544332    233556777887776543

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=96.97  E-value=0.014  Score=41.71  Aligned_cols=73  Identities=16%  Similarity=0.129  Sum_probs=50.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhc----CCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           15 TALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKSK----GLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .+.|.|+ |++|..++..|+..|  .++++++++++..+....++...    +.......   .+.+    .+       
T Consensus         2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~----~l-------   66 (306)
T cd05291           2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYS----DC-------   66 (306)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHH----Hh-------
Confidence            5778886 899999999999999  58999999887766666655432    22222221   1211    12       


Q ss_pred             CCcccEEEecCCCCC
Q 033396           89 DGKLNILVSSAQLPY  103 (120)
Q Consensus        89 ~g~id~li~~ag~~~  103 (120)
                       ...|++|+++|.+.
T Consensus        67 -~~aDIVIitag~~~   80 (306)
T cd05291          67 -KDADIVVITAGAPQ   80 (306)
T ss_pred             -CCCCEEEEccCCCC
Confidence             56899999999965

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=96.96  E-value=0.011  Score=41.70  Aligned_cols=81  Identities=20%  Similarity=0.244  Sum_probs=52.3

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+.+++|+|+++++|.+++..+...|++|+.++++....+.+ .+   .+... .  .+..+.+..+++.. ...  +.+
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~---~g~~~-~--~~~~~~~~~~~~~~-~~~--~~~  211 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RA---LGADV-A--VDYTRPDWPDQVRE-ALG--GGG  211 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HH---cCCCE-E--EecCCccHHHHHHH-HcC--CCC
Confidence            467899999999999999999999999999998887665433 32   23321 1  23333332232221 111  135


Q ss_pred             ccEEEecCCCC
Q 033396           92 LNILVSSAQLP  102 (120)
Q Consensus        92 id~li~~ag~~  102 (120)
                      +|.++++.|-.
T Consensus       212 ~d~vl~~~g~~  222 (324)
T cd08244         212 VTVVLDGVGGA  222 (324)
T ss_pred             ceEEEECCChH
Confidence            89999987753

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.96  E-value=0.0036  Score=39.89  Aligned_cols=45  Identities=27%  Similarity=0.356  Sum_probs=39.0

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR   53 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~   53 (120)
                      .+++||.++|.|.+.-.|..++..|.++|++|..+.+....+++.
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~~   68 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQSK   68 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHHH
Confidence            368999999999999999999999999999999998765554443

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK04148 hypothetical protein; Provisional

Probab=96.94  E-value=0.0044  Score=39.19  Aligned_cols=94  Identities=13%  Similarity=0.143  Sum_probs=61.1

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHH----------------
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRA----------------   75 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~----------------   75 (120)
                      +++.++..|.+  .|.+++..|++.|+.|+.+|.++...+...+.    +  +.++..|+.+++                
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~----~--~~~v~dDlf~p~~~~y~~a~liysirpp   87 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL----G--LNAFVDDLFNPNLEIYKNAKLIYSIRPP   87 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh----C--CeEEECcCCCCCHHHHhcCCEEEEeCCC
Confidence            45679999987  67788999999999999999998865544332    2  456667776653                


Q ss_pred             -HHHHHHHHHHhhcCCcccEEEecCCCCCc-cceeeeeccce
Q 033396           76 -QREKLMETVSSQFDGKLNILVSSAQLPYS-QRKFFVKSRGP  115 (120)
Q Consensus        76 -~~~~~~~~~~~~~~g~id~li~~ag~~~~-~~~~~~n~~g~  115 (120)
                       ++...+-++.++.  ..|.+|.--+.-.+ .+.--+|+.|.
T Consensus        88 ~el~~~~~~la~~~--~~~~~i~~l~~e~~~~~~kl~ny~~~  127 (134)
T PRK04148         88 RDLQPFILELAKKI--NVPLIIKPLSGEEPIKELKLINYKGK  127 (134)
T ss_pred             HHHHHHHHHHHHHc--CCCEEEEcCCCCCCCcceEEEecCCe
Confidence             3444444554444  46766665544432 34445666653

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=96.94  E-value=0.01  Score=41.38  Aligned_cols=40  Identities=38%  Similarity=0.520  Sum_probs=34.9

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN   51 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~   51 (120)
                      .+.+++|+|+++++|.+++..+...|+.|+.++++....+
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~  178 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLA  178 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHH
Confidence            5789999999999999999999999999999988765543

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=96.93  E-value=0.0096  Score=42.05  Aligned_cols=80  Identities=13%  Similarity=0.086  Sum_probs=51.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+.+++|.|+++++|.+++......|++++.+.++.+..+.+.+    .+.. .++  +..+.. ..+.+.+....  .+
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~----~g~~-~~~--~~~~~~-~~~~i~~~~~~--~~  208 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA----LGIG-PVV--STEQPG-WQDKVREAAGG--AP  208 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh----cCCC-EEE--cCCCch-HHHHHHHHhCC--CC
Confidence            57889999999999999999989999999988887765443322    2332 122  222222 22222222211  35


Q ss_pred             ccEEEecCCC
Q 033396           92 LNILVSSAQL  101 (120)
Q Consensus        92 id~li~~ag~  101 (120)
                      +|.++.++|.
T Consensus       209 ~d~v~d~~g~  218 (324)
T cd08292         209 ISVALDSVGG  218 (324)
T ss_pred             CcEEEECCCC
Confidence            8999998775

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.91  E-value=0.0032  Score=43.99  Aligned_cols=78  Identities=13%  Similarity=0.101  Sum_probs=50.3

Q ss_pred             EEEecCCCchHHHHHHHHHHCC----CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           16 ALVTGGTKGIGYAVVEELAAFG----AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      +.|.|++|.+|..++..|+..+    .+++++|.+++.++....+++......  ....++...+....+        ..
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~--~~~~i~~~~d~~~~~--------~~   70 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL--ADIKVSITDDPYEAF--------KD   70 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc--cCcEEEECCchHHHh--------CC
Confidence            3688998899999999999988    789999998866655555554321111  011111111122233        56


Q ss_pred             ccEEEecCCCCC
Q 033396           92 LNILVSSAQLPY  103 (120)
Q Consensus        92 id~li~~ag~~~  103 (120)
                      .|++|..+|...
T Consensus        71 aDiVv~t~~~~~   82 (263)
T cd00650          71 ADVVIITAGVGR   82 (263)
T ss_pred             CCEEEECCCCCC
Confidence            899999988855

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.87  E-value=0.025  Score=38.41  Aligned_cols=73  Identities=21%  Similarity=0.166  Sum_probs=48.2

Q ss_pred             EEecCCCchHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhc-----------CCeEEEEeccCCCHHHHHHHHHHH
Q 033396           17 LVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWKSK-----------GLQVSGNACDLKIRAQREKLMETV   84 (120)
Q Consensus        17 litGa~~~ig~~~a~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~   84 (120)
                      +..+++|.||.+++++|++.|++|++.+|.. +.++...+.+...           ...+.++..-.   +.+..++.++
T Consensus         4 ~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~---~a~~~v~~~l   80 (211)
T COG2085           4 IAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPF---EAIPDVLAEL   80 (211)
T ss_pred             EEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccH---HHHHhHHHHH
Confidence            4456779999999999999999999996654 4455444444321           34555555433   4456667777


Q ss_pred             HhhcCCcc
Q 033396           85 SSQFDGKL   92 (120)
Q Consensus        85 ~~~~~g~i   92 (120)
                      .+.+++++
T Consensus        81 ~~~~~~KI   88 (211)
T COG2085          81 RDALGGKI   88 (211)
T ss_pred             HHHhCCeE
Confidence            77663343

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.85  E-value=0.017  Score=43.59  Aligned_cols=78  Identities=19%  Similarity=0.213  Sum_probs=53.8

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH-HHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-LNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .++++.++|.|+ |++|.++|+.|.++|++|.++++.... .....+.++..|..+.  ..+-..      .       .
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~--~~~~~~------~-------~   76 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVR--LGPGPT------L-------P   76 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEE--ECCCcc------c-------c
Confidence            467889999997 779999999999999999999865433 3334455655564432  222111      0       1


Q ss_pred             CCcccEEEecCCCCCc
Q 033396           89 DGKLNILVSSAQLPYS  104 (120)
Q Consensus        89 ~g~id~li~~ag~~~~  104 (120)
                       ...|.+|.+.|+...
T Consensus        77 -~~~D~Vv~s~Gi~~~   91 (480)
T PRK01438         77 -EDTDLVVTSPGWRPD   91 (480)
T ss_pred             -CCCCEEEECCCcCCC
Confidence             357999999998763

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.84  E-value=0.0052  Score=43.65  Aligned_cols=44  Identities=23%  Similarity=0.273  Sum_probs=38.2

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR   53 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~   53 (120)
                      +++||.++|.|.+.-+|+.++..|...|++|.++.+....+.+.
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~~~  198 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMASY  198 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHHH
Confidence            58999999999999999999999999999999998865544433

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=96.84  E-value=0.017  Score=42.01  Aligned_cols=38  Identities=29%  Similarity=0.279  Sum_probs=30.7

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETEL   50 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~   50 (120)
                      .+++++|.|+ |++|..++......|++|++++.+..+.
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~  220 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKE  220 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchh
Confidence            5778999775 8999999888888999988877665443

>PRK05086 malate dehydrogenase; Provisional

Probab=96.83  E-value=0.0042  Score=44.63  Aligned_cols=79  Identities=15%  Similarity=0.107  Sum_probs=45.5

Q ss_pred             cEEEEecCCCchHHHHHHHHHH-C--CCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           14 MTALVTGGTKGIGYAVVEELAA-F--GAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~-~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      +.++|.||+|++|.+++..+.. .  +..+++.++++.. ....-.+....... .+..  .+.+++.+.+        .
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g~alDl~~~~~~~-~i~~--~~~~d~~~~l--------~   68 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PGVAVDLSHIPTAV-KIKG--FSGEDPTPAL--------E   68 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cceehhhhcCCCCc-eEEE--eCCCCHHHHc--------C
Confidence            3588999999999999998855 2  3578888887432 11111121111111 1121  1111222222        4


Q ss_pred             cccEEEecCCCCCc
Q 033396           91 KLNILVSSAQLPYS  104 (120)
Q Consensus        91 ~id~li~~ag~~~~  104 (120)
                      ..|++|.++|..+.
T Consensus        69 ~~DiVIitaG~~~~   82 (312)
T PRK05086         69 GADVVLISAGVARK   82 (312)
T ss_pred             CCCEEEEcCCCCCC
Confidence            59999999999763

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.83  E-value=0.017  Score=41.64  Aligned_cols=77  Identities=14%  Similarity=0.258  Sum_probs=49.2

Q ss_pred             EEEecCCCchHHHHHHHHHHCC-CEEEEeeCCh-------------------HHHHHHHHHHHhc--CCeEEEEeccCCC
Q 033396           16 ALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNE-------------------TELNQRIQEWKSK--GLQVSGNACDLKI   73 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~-------------------~~~~~~~~~~~~~--~~~~~~~~~D~~~   73 (120)
                      ++|.|+ ||+|.++++.|+..| -++.++|.+.                   .+.+.+.+.+.+.  ..++..+..++++
T Consensus         2 VlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~~   80 (312)
T cd01489           2 VLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIKD   80 (312)
T ss_pred             EEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCCC
Confidence            677886 999999999999999 5688877541                   2233444455543  4566666667765


Q ss_pred             HHHHHHHHHHHHhhcCCcccEEEecCCC
Q 033396           74 RAQREKLMETVSSQFDGKLNILVSSAQL  101 (120)
Q Consensus        74 ~~~~~~~~~~~~~~~~g~id~li~~ag~  101 (120)
                      ......++        .+.|++|++.--
T Consensus        81 ~~~~~~f~--------~~~DvVv~a~Dn  100 (312)
T cd01489          81 PDFNVEFF--------KQFDLVFNALDN  100 (312)
T ss_pred             ccchHHHH--------hcCCEEEECCCC
Confidence            32222333        457887777643

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=96.82  E-value=0.014  Score=40.70  Aligned_cols=41  Identities=27%  Similarity=0.333  Sum_probs=35.2

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQ   52 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~   52 (120)
                      ++.+++|.|+++++|.+++......|++|+.+.+++...+.
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  176 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAEL  176 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence            57899999999999999999888899999988877665443

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=96.80  E-value=0.016  Score=41.38  Aligned_cols=36  Identities=19%  Similarity=0.306  Sum_probs=31.9

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      .+.+++|.|+++++|.+++......|++++++.+..
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~  181 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDR  181 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCC
Confidence            578999999999999999999989999988887755

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.79  E-value=0.038  Score=34.92  Aligned_cols=78  Identities=12%  Similarity=0.206  Sum_probs=49.6

Q ss_pred             EEEecCCCchHHHHHHHHHHCCC-EEEEeeCCh-------------------HHHHHHHHHHHhc--CCeEEEEeccCCC
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE-------------------TELNQRIQEWKSK--GLQVSGNACDLKI   73 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~~~~~--~~~~~~~~~D~~~   73 (120)
                      ++|.|+ |++|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+++.  ..++..+..++.+
T Consensus         2 VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~   80 (143)
T cd01483           2 VLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISE   80 (143)
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecCh
Confidence            677887 8999999999999995 688887541                   2233344455544  3455555555543


Q ss_pred             HHHHHHHHHHHHhhcCCcccEEEecCCCCC
Q 033396           74 RAQREKLMETVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        74 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~  103 (120)
                      .. ....+        .+.|++|.+..-..
T Consensus        81 ~~-~~~~~--------~~~diVi~~~d~~~  101 (143)
T cd01483          81 DN-LDDFL--------DGVDLVIDAIDNIA  101 (143)
T ss_pred             hh-HHHHh--------cCCCEEEECCCCHH
Confidence            22 22222        57899988876644

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.79  E-value=0.012  Score=38.11  Aligned_cols=87  Identities=13%  Similarity=0.049  Sum_probs=53.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH-------HhcCCeEEEEeccCCCHHHHHHHHHH--HH
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW-------KSKGLQVSGNACDLKIRAQREKLMET--VS   85 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~~--~~   85 (120)
                      ++-+.|. |.+|..+++.|++.|++|+..+|+++..++..+.-       .+.-..+.++-.=+.+.+.++.++..  +.
T Consensus         3 ~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i~   81 (163)
T PF03446_consen    3 KIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENIL   81 (163)
T ss_dssp             EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTHG
T ss_pred             EEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHHh
Confidence            4556666 89999999999999999999999987766555421       11101112233347777888888877  66


Q ss_pred             hhcCCcccEEEecCCCCC
Q 033396           86 SQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~  103 (120)
                      ... .+=.++|++.-...
T Consensus        82 ~~l-~~g~iiid~sT~~p   98 (163)
T PF03446_consen   82 AGL-RPGKIIIDMSTISP   98 (163)
T ss_dssp             GGS--TTEEEEE-SS--H
T ss_pred             hcc-ccceEEEecCCcch
Confidence            655 34455665555443

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.78  E-value=0.021  Score=38.40  Aligned_cols=36  Identities=22%  Similarity=0.374  Sum_probs=29.7

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRN   46 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~   46 (120)
                      .++.++++|.|+ +|+|.++++.|+..| .++.++|.+
T Consensus        18 ~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          18 RLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            467888999986 669999999999999 458888754

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=96.78  E-value=0.02  Score=40.88  Aligned_cols=40  Identities=23%  Similarity=0.304  Sum_probs=35.2

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN   51 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~   51 (120)
                      .+.+++|.|+++++|.+++..+...|.+|+.+.+++++.+
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~  204 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLE  204 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence            4679999999999999999999999999999988876554

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=96.78  E-value=0.021  Score=40.65  Aligned_cols=79  Identities=13%  Similarity=0.070  Sum_probs=47.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      +.+++++|+++++|...+......|++|+.+++++.+.+.+.    ..+... ++  |..+.+..++ +.+....  .++
T Consensus       144 ~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~----~~g~~~-~i--~~~~~~~~~~-v~~~~~~--~~~  213 (324)
T cd08291         144 AKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK----KIGAEY-VL--NSSDPDFLED-LKELIAK--LNA  213 (324)
T ss_pred             CcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HcCCcE-EE--ECCCccHHHH-HHHHhCC--CCC
Confidence            344555699999999988877778999998888876554332    234332 22  2222222222 2222111  368


Q ss_pred             cEEEecCCC
Q 033396           93 NILVSSAQL  101 (120)
Q Consensus        93 d~li~~ag~  101 (120)
                      |+++.+.|-
T Consensus       214 d~vid~~g~  222 (324)
T cd08291         214 TIFFDAVGG  222 (324)
T ss_pred             cEEEECCCc
Confidence            999998874

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=96.78  E-value=0.014  Score=41.10  Aligned_cols=80  Identities=8%  Similarity=0.135  Sum_probs=50.4

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+.+++|.|+++.+|.+++..+...|++++.+.+++.+.+.+ .+   .+....   .+..+.....+ +.+...  +.+
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~~~---~~~~~~~~~~~-~~~~~~--~~~  207 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KA---LGADEV---IDSSPEDLAQR-VKEATG--GAG  207 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-Hh---cCCCEE---ecccchhHHHH-HHHHhc--CCC
Confidence            567999999999999999999999999998888877554333 22   232211   12222222222 222211  136


Q ss_pred             ccEEEecCCC
Q 033396           92 LNILVSSAQL  101 (120)
Q Consensus        92 id~li~~ag~  101 (120)
                      +|.++.+.|-
T Consensus       208 ~d~vl~~~g~  217 (323)
T cd05282         208 ARLALDAVGG  217 (323)
T ss_pred             ceEEEECCCC
Confidence            8999988764

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=96.77  E-value=0.019  Score=40.72  Aligned_cols=79  Identities=16%  Similarity=0.151  Sum_probs=50.7

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+..++|.|+++.+|.+++......|.+|+.+.+++.....+ .+   .+... ++  +..+. +..+.+.+..   ++.
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~~-v~--~~~~~-~~~~~~~~~~---~~~  207 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KS---LGCDR-PI--NYKTE-DLGEVLKKEY---PKG  207 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HH---cCCce-EE--eCCCc-cHHHHHHHhc---CCC
Confidence            577899999999999999988888999999888876554433 22   23221 22  22222 2222333221   145


Q ss_pred             ccEEEecCCC
Q 033396           92 LNILVSSAQL  101 (120)
Q Consensus        92 id~li~~ag~  101 (120)
                      +|.++++.|-
T Consensus       208 vd~v~~~~g~  217 (329)
T cd08250         208 VDVVYESVGG  217 (329)
T ss_pred             CeEEEECCcH
Confidence            8999998763

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.74  E-value=0.0038  Score=40.69  Aligned_cols=45  Identities=24%  Similarity=0.370  Sum_probs=34.7

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR   53 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~   53 (120)
                      .+++||.++|.|.+.-+|+.++..|.++|+.|.++.+....+++.
T Consensus        32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~   76 (160)
T PF02882_consen   32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEI   76 (160)
T ss_dssp             -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHH
T ss_pred             CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccce
Confidence            358999999999999999999999999999999988776555433

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.74  E-value=0.0092  Score=39.49  Aligned_cols=37  Identities=22%  Similarity=0.277  Sum_probs=29.9

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR   53 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~   53 (120)
                      +.|.|+ |.+|..+|..++..|++|+++++++..++..
T Consensus         2 V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~   38 (180)
T PF02737_consen    2 VAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERA   38 (180)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHH
T ss_pred             EEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhh
Confidence            567777 9999999999999999999999997665433

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=96.72  E-value=0.026  Score=39.55  Aligned_cols=77  Identities=22%  Similarity=0.289  Sum_probs=50.3

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+.+++|.|+++++|.+++......|++|+.+.+++.+.+.. .+   .+.... +. +  .. +....+.+.    +.+
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~~~-~~-~--~~-~~~~~i~~~----~~~  208 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KE---LGADEV-VI-D--DG-AIAEQLRAA----PGG  208 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hh---cCCcEE-Ee-c--Cc-cHHHHHHHh----CCC
Confidence            578999999999999999999999999999888876554333 22   243221 11 1  11 122222222    256


Q ss_pred             ccEEEecCCC
Q 033396           92 LNILVSSAQL  101 (120)
Q Consensus        92 id~li~~ag~  101 (120)
                      +|.++++.|-
T Consensus       209 ~d~vl~~~~~  218 (320)
T cd08243         209 FDKVLELVGT  218 (320)
T ss_pred             ceEEEECCCh
Confidence            8999998764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=96.71  E-value=0.032  Score=40.92  Aligned_cols=76  Identities=20%  Similarity=0.223  Sum_probs=47.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+.+++|.|+ +++|...+......|++|++++++.+...+..++   .|.... +  |..+.+.+       .+.. ++
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~---lGa~~~-i--~~~~~~~v-------~~~~-~~  242 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDR---LGADSF-L--VTTDSQKM-------KEAV-GT  242 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHh---CCCcEE-E--cCcCHHHH-------HHhh-CC
Confidence            5778999886 8999999988888999998888765442223222   343221 1  22222212       1222 45


Q ss_pred             ccEEEecCCCC
Q 033396           92 LNILVSSAQLP  102 (120)
Q Consensus        92 id~li~~ag~~  102 (120)
                      +|+++.++|..
T Consensus       243 ~D~vid~~G~~  253 (375)
T PLN02178        243 MDFIIDTVSAE  253 (375)
T ss_pred             CcEEEECCCcH
Confidence            88888888754

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.70  E-value=0.0053  Score=43.87  Aligned_cols=44  Identities=20%  Similarity=0.228  Sum_probs=38.4

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR   53 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~   53 (120)
                      +++||.+.|.|.++-+|+.++..|.+.|++|.++.+....+.+.
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~  199 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKAL  199 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHH
Confidence            57999999999999999999999999999999997765544433

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=96.69  E-value=0.042  Score=40.05  Aligned_cols=79  Identities=15%  Similarity=0.185  Sum_probs=49.2

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCC-HHHHHHHHHHHHhhcC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKI-RAQREKLMETVSSQFD   89 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   89 (120)
                      .+.+++|+|+ +++|...+......|+ +|+.+++++.+++.+ .++   |....   .|..+ .+.+.+.+.+...   
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~---Ga~~~---i~~~~~~~~~~~~v~~~~~---  253 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKL---GATDC---VNPNDYDKPIQEVIVEITD---  253 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCCeE---EcccccchhHHHHHHHHhC---
Confidence            4778999985 8999999888888898 799888887665433 222   43221   13222 1222222322221   


Q ss_pred             CcccEEEecCCC
Q 033396           90 GKLNILVSSAQL  101 (120)
Q Consensus        90 g~id~li~~ag~  101 (120)
                      +.+|++|.++|.
T Consensus       254 ~g~d~vid~~G~  265 (368)
T TIGR02818       254 GGVDYSFECIGN  265 (368)
T ss_pred             CCCCEEEECCCC
Confidence            368999998874

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.69  E-value=0.029  Score=36.65  Aligned_cols=42  Identities=21%  Similarity=0.268  Sum_probs=32.3

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN   51 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~   51 (120)
                      .++.||.++|.|= |.+|+.+|+.|...|++|++++.++-...
T Consensus        19 ~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~al   60 (162)
T PF00670_consen   19 LMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRAL   60 (162)
T ss_dssp             S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHH
T ss_pred             eeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHH
Confidence            4689999999886 89999999999999999999999986543

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.68  E-value=0.016  Score=43.41  Aligned_cols=40  Identities=20%  Similarity=0.265  Sum_probs=35.5

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETEL   50 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~   50 (120)
                      .+.+++++|.|. |.+|+.++..+...|++|+++++++...
T Consensus       209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra  248 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICA  248 (425)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhh
Confidence            468999999997 7899999999999999999999887553

>PRK07411 hypothetical protein; Validated

Probab=96.67  E-value=0.029  Score=41.57  Aligned_cols=83  Identities=17%  Similarity=0.173  Sum_probs=54.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCCh-------------------HHHHHHHHHHHhc--CCeEEEE
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNE-------------------TELNQRIQEWKSK--GLQVSGN   67 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~-------------------~~~~~~~~~~~~~--~~~~~~~   67 (120)
                      .++...++|.|+ ||+|..+++.|+..| -++.++|.+.                   .+.+...+.+.+.  ..++..+
T Consensus        35 ~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~  113 (390)
T PRK07411         35 RLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLY  113 (390)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEE
Confidence            467788999988 899999999999999 5688776641                   1233445555554  3555555


Q ss_pred             eccCCCHHHHHHHHHHHHhhcCCcccEEEecCCCC
Q 033396           68 ACDLKIRAQREKLMETVSSQFDGKLNILVSSAQLP  102 (120)
Q Consensus        68 ~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  102 (120)
                      ...++. +...+++        ...|++|.+..-.
T Consensus       114 ~~~~~~-~~~~~~~--------~~~D~Vvd~~d~~  139 (390)
T PRK07411        114 ETRLSS-ENALDIL--------APYDVVVDGTDNF  139 (390)
T ss_pred             ecccCH-HhHHHHH--------hCCCEEEECCCCH
Confidence            555554 2333344        4678888886543

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.67  E-value=0.01  Score=40.38  Aligned_cols=41  Identities=24%  Similarity=0.253  Sum_probs=34.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHH
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQ   55 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~   55 (120)
                      ++.|.|++|.+|.++++.|++.|++|++.+|+++..+....
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~   42 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAA   42 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHH
Confidence            47889989999999999999999999999998776654433

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.65  E-value=0.044  Score=39.55  Aligned_cols=40  Identities=30%  Similarity=0.419  Sum_probs=34.3

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQ   52 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~   52 (120)
                      .+.+++|.|+ +++|..++......|++|+.+++++.+++.
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~  205 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEM  205 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence            4789999999 999999988888899999999888776543

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=96.65  E-value=0.023  Score=40.15  Aligned_cols=81  Identities=14%  Similarity=0.214  Sum_probs=50.3

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+.+++|.|+++++|.+++..+...|++++++.+++...+.+ .+   .+... ++  +..+.+...+.+.+....  .+
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~~-~~--~~~~~~~~~~~~~~~~~~--~~  210 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC-KK---LAAII-LI--RYPDEEGFAPKVKKLTGE--KG  210 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH---cCCcE-EE--ecCChhHHHHHHHHHhCC--CC
Confidence            567899999999999999999999999988888776554433 22   24321 11  222222122222222111  35


Q ss_pred             ccEEEecCCC
Q 033396           92 LNILVSSAQL  101 (120)
Q Consensus        92 id~li~~ag~  101 (120)
                      +|.++++.|.
T Consensus       211 ~d~~i~~~~~  220 (334)
T PTZ00354        211 VNLVLDCVGG  220 (334)
T ss_pred             ceEEEECCch
Confidence            8999988763

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.64  E-value=0.041  Score=36.97  Aligned_cols=36  Identities=17%  Similarity=0.380  Sum_probs=29.5

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRN   46 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~   46 (120)
                      .+++..++|.|++ |+|.++++.|+..| .++.++|.+
T Consensus        16 ~L~~s~VlviG~g-glGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          16 KLRSAKVLIIGAG-ALGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             HHhhCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEECC
Confidence            3677889999885 59999999999999 458888754

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=96.63  E-value=0.046  Score=39.75  Aligned_cols=79  Identities=18%  Similarity=0.191  Sum_probs=51.0

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCH-HHHHHHHHHHHhhcC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR-AQREKLMETVSSQFD   89 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   89 (120)
                      .+.+++|.|+ +++|...+..+...|+ +|+.++++..+.+.+ .+   .+... +  .|..+. +++.+.+.+...   
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~---lGa~~-~--i~~~~~~~~~~~~v~~~~~---  254 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KK---FGATD-C--VNPKDHDKPIQQVLVEMTD---  254 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HH---cCCCE-E--EcccccchHHHHHHHHHhC---
Confidence            4788999975 8999999988888998 698888887765433 22   24322 2  233322 123333333322   


Q ss_pred             CcccEEEecCCC
Q 033396           90 GKLNILVSSAQL  101 (120)
Q Consensus        90 g~id~li~~ag~  101 (120)
                      +++|+++.++|-
T Consensus       255 ~g~d~vid~~g~  266 (368)
T cd08300         255 GGVDYTFECIGN  266 (368)
T ss_pred             CCCcEEEECCCC
Confidence            468999998874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.63  E-value=0.049  Score=38.44  Aligned_cols=36  Identities=22%  Similarity=0.248  Sum_probs=30.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRN   46 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~   46 (120)
                      .+++..++|.|+ ||+|..+++.|+..| .++.++|.+
T Consensus        27 kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         27 LFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             HhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            367888998887 899999999999999 678888765

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=96.62  E-value=0.048  Score=39.27  Aligned_cols=76  Identities=11%  Similarity=0.041  Sum_probs=52.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhcC---CeEEEEeccCCCHHHHHHHHHHHHh
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKG---LQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      .++.+.|+|+ |.+|..++..|+..+.  .++++|++++.++....++....   .++.. ..  .+   . ..+     
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i-~~--~~---~-~~~-----   71 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKI-YA--GD---Y-SDC-----   71 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEE-Ee--CC---H-HHh-----
Confidence            4668999998 9999999999999884  79999998776655555554321   12222 11  11   1 112     


Q ss_pred             hcCCcccEEEecCCCCC
Q 033396           87 QFDGKLNILVSSAQLPY  103 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~  103 (120)
                         ..-|++|..+|.+.
T Consensus        72 ---~~adivIitag~~~   85 (315)
T PRK00066         72 ---KDADLVVITAGAPQ   85 (315)
T ss_pred             ---CCCCEEEEecCCCC
Confidence               57899999999865

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.61  E-value=0.042  Score=40.75  Aligned_cols=81  Identities=17%  Similarity=0.233  Sum_probs=51.9

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCCh-------------------HHHHHHHHHHHhcC--CeEEEEe
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNE-------------------TELNQRIQEWKSKG--LQVSGNA   68 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~-------------------~~~~~~~~~~~~~~--~~~~~~~   68 (120)
                      ++...++|.|+ ||+|..+++.|+..| -++.++|.+.                   .+.+...+.+.+..  .++..+.
T Consensus        40 L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~  118 (392)
T PRK07878         40 LKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHE  118 (392)
T ss_pred             HhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEe
Confidence            56778999988 899999999999999 4688777641                   22333444555543  4455555


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCcccEEEecCCC
Q 033396           69 CDLKIRAQREKLMETVSSQFDGKLNILVSSAQL  101 (120)
Q Consensus        69 ~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  101 (120)
                      ..++. +....++        ...|++|.+..-
T Consensus       119 ~~i~~-~~~~~~~--------~~~D~Vvd~~d~  142 (392)
T PRK07878        119 FRLDP-SNAVELF--------SQYDLILDGTDN  142 (392)
T ss_pred             ccCCh-hHHHHHH--------hcCCEEEECCCC
Confidence            55543 2333344        457888777543

>PRK14851 hypothetical protein; Provisional

Probab=96.61  E-value=0.041  Score=43.61  Aligned_cols=82  Identities=11%  Similarity=0.194  Sum_probs=55.7

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCCh-------------------HHHHHHHHHHHhc--CCeEEEE
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNE-------------------TELNQRIQEWKSK--GLQVSGN   67 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~-------------------~~~~~~~~~~~~~--~~~~~~~   67 (120)
                      .++++.++|.|+ ||+|..+++.|+..| -++.++|.+.                   .+.+...+.+.+.  ..++..+
T Consensus        40 kL~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~  118 (679)
T PRK14851         40 RLAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPF  118 (679)
T ss_pred             HHhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEE
Confidence            467889999996 899999999999999 5677776541                   2233334444443  4567777


Q ss_pred             eccCCCHHHHHHHHHHHHhhcCCcccEEEecCCC
Q 033396           68 ACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL  101 (120)
Q Consensus        68 ~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  101 (120)
                      ...++. +.+..++        ..+|+||.+.-.
T Consensus       119 ~~~i~~-~n~~~~l--------~~~DvVid~~D~  143 (679)
T PRK14851        119 PAGINA-DNMDAFL--------DGVDVVLDGLDF  143 (679)
T ss_pred             ecCCCh-HHHHHHH--------hCCCEEEECCCC
Confidence            767753 4455555        457888877653

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=96.59  E-value=0.027  Score=42.11  Aligned_cols=41  Identities=22%  Similarity=0.220  Sum_probs=35.7

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN   51 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~   51 (120)
                      .+.|++++|.|+ |.||+.+++.+...|++|+++++++..+.
T Consensus       199 ~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~  239 (413)
T cd00401         199 MIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICAL  239 (413)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHH
Confidence            368999999998 68999999999999999999998876543

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.57  E-value=0.014  Score=41.73  Aligned_cols=38  Identities=29%  Similarity=0.413  Sum_probs=34.7

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEee-CCh
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCS-RNE   47 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~-~~~   47 (120)
                      +++||.++|.|.++-+|..++..|.+.|++|.++. |+.
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~  193 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR  193 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence            57999999999999999999999999999999995 553

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.56  E-value=0.012  Score=41.78  Aligned_cols=43  Identities=21%  Similarity=0.358  Sum_probs=37.4

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQ   52 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~   52 (120)
                      +++||.++|.|.+.-+|..++..|.++|++|.++......+.+
T Consensus       154 ~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~~  196 (285)
T PRK14191        154 EIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLSF  196 (285)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHHH
Confidence            5789999999999999999999999999999998765555443

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=96.56  E-value=0.021  Score=40.77  Aligned_cols=86  Identities=17%  Similarity=0.239  Sum_probs=64.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      +|-+++--||+++.|++....-...|++-+-+-|+.+..+++.+.|...|..-++     ++++--++-+.+.+... ++
T Consensus       160 ~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~Vi-----Teeel~~~~~~k~~~~~-~~  233 (354)
T KOG0025|consen  160 KGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVI-----TEEELRDRKMKKFKGDN-PR  233 (354)
T ss_pred             CCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEe-----cHHHhcchhhhhhhccC-CC
Confidence            5678888999999999988877789999888889998888899998888865543     33332233343333445 78


Q ss_pred             ccEEEecCCCCC
Q 033396           92 LNILVSSAQLPY  103 (120)
Q Consensus        92 id~li~~ag~~~  103 (120)
                      +..-+||+|--.
T Consensus       234 prLalNcVGGks  245 (354)
T KOG0025|consen  234 PRLALNCVGGKS  245 (354)
T ss_pred             ceEEEeccCchh
Confidence            889999998744

>PLN02740 Alcohol dehydrogenase-like

Probab=96.55  E-value=0.043  Score=40.18  Aligned_cols=80  Identities=19%  Similarity=0.169  Sum_probs=50.1

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCH-HHHHHHHHHHHhhcC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR-AQREKLMETVSSQFD   89 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   89 (120)
                      .+.+++|.|+ |++|...+..+...|+ +|+.+++++..++.. .+   .|... ++  |..++ +.+.+.+.+.   .+
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a-~~---~Ga~~-~i--~~~~~~~~~~~~v~~~---~~  266 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG-KE---MGITD-FI--NPKDSDKPVHERIREM---TG  266 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH-HH---cCCcE-EE--ecccccchHHHHHHHH---hC
Confidence            5778999986 8999999988888998 598888887665433 22   24322 22  33322 1222222222   11


Q ss_pred             CcccEEEecCCCC
Q 033396           90 GKLNILVSSAQLP  102 (120)
Q Consensus        90 g~id~li~~ag~~  102 (120)
                      +.+|++|.++|..
T Consensus       267 ~g~dvvid~~G~~  279 (381)
T PLN02740        267 GGVDYSFECAGNV  279 (381)
T ss_pred             CCCCEEEECCCCh
Confidence            3588888888864

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.55  E-value=0.045  Score=37.76  Aligned_cols=36  Identities=25%  Similarity=0.287  Sum_probs=30.6

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRN   46 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~   46 (120)
                      .++++.++|.|+ ||+|..+++.|++.| .+++++|.+
T Consensus         8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755           8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            367788999987 899999999999999 578888765

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=96.54  E-value=0.031  Score=40.21  Aligned_cols=78  Identities=24%  Similarity=0.256  Sum_probs=49.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC-
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD-   89 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-   89 (120)
                      .+.+++|.|+ +++|..++..+...|+ .|+.++++..+.+.+ .+   .+....   .|..+.+..+.    +.+..+ 
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~---~ga~~~---i~~~~~~~~~~----l~~~~~~  239 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EE---LGATIV---LDPTEVDVVAE----VRKLTGG  239 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HH---hCCCEE---ECCCccCHHHH----HHHHhCC
Confidence            5778999985 8999999998888998 788888777665433 22   243222   23333322222    222221 


Q ss_pred             CcccEEEecCCC
Q 033396           90 GKLNILVSSAQL  101 (120)
Q Consensus        90 g~id~li~~ag~  101 (120)
                      +++|.++.++|.
T Consensus       240 ~~~d~vid~~g~  251 (351)
T cd08233         240 GGVDVSFDCAGV  251 (351)
T ss_pred             CCCCEEEECCCC
Confidence            349999999874

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=96.53  E-value=0.0089  Score=41.33  Aligned_cols=50  Identities=26%  Similarity=0.320  Sum_probs=40.7

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCe
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ   63 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~   63 (120)
                      +.++.++=.||++|   .+++.+|+.|++|...|-+++..+.......+.+..
T Consensus        58 l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~gv~  107 (243)
T COG2227          58 LPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKLHALESGVN  107 (243)
T ss_pred             CCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHHhhhhcccc
Confidence            68899999999999   599999999999999999988876665554444543

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.53  E-value=0.02  Score=41.37  Aligned_cols=76  Identities=20%  Similarity=0.194  Sum_probs=51.0

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCC-CHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLK-IRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~g   90 (120)
                      .|+++-|+|++| ||.--++.-..-|++|+..+++..+-++..+.|   |.+...   |.+ +++.++++.    +...+
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L---GAd~fv---~~~~d~d~~~~~~----~~~dg  249 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL---GADVFV---DSTEDPDIMKAIM----KTTDG  249 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc---CcceeE---EecCCHHHHHHHH----HhhcC
Confidence            789999999977 987666666668999999999876655555544   655433   455 555544444    22235


Q ss_pred             cccEEEec
Q 033396           91 KLNILVSS   98 (120)
Q Consensus        91 ~id~li~~   98 (120)
                      .+|.++|-
T Consensus       250 ~~~~v~~~  257 (360)
T KOG0023|consen  250 GIDTVSNL  257 (360)
T ss_pred             cceeeeec
Confidence            56666644

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=96.53  E-value=0.023  Score=32.90  Aligned_cols=36  Identities=39%  Similarity=0.516  Sum_probs=31.6

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHC-CCEEEEeeC
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAF-GAIVHTCSR   45 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~-g~~v~~~~~   45 (120)
                      .++++++++|.|+ |..|..++..+.+. +.+|.+++|
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            3478899999999 99999999999998 577888887

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.53  E-value=0.065  Score=41.14  Aligned_cols=85  Identities=22%  Similarity=0.271  Sum_probs=56.2

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCC-------------CHHHH
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLK-------------IRAQR   77 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-------------~~~~~   77 (120)
                      ..+.+++|.|+ |.+|...+..+...|+.|++++++...++... +   .+...  +..|..             +.+..
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~---lGa~~--v~v~~~e~g~~~~gYa~~~s~~~~  234 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-S---MGAEF--LELDFKEEGGSGDGYAKVMSEEFI  234 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-H---cCCeE--EeccccccccccccceeecCHHHH
Confidence            45678999996 89999999999999999999999887644322 2   24332  233321             12333


Q ss_pred             HHHHHHHHhhcCCcccEEEecCCCCC
Q 033396           78 EKLMETVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        78 ~~~~~~~~~~~~g~id~li~~ag~~~  103 (120)
                      ++..+...++. ...|++|+++-++.
T Consensus       235 ~~~~~~~~e~~-~~~DIVI~TalipG  259 (511)
T TIGR00561       235 AAEMELFAAQA-KEVDIIITTALIPG  259 (511)
T ss_pred             HHHHHHHHHHh-CCCCEEEECcccCC
Confidence            44444445555 67999999994433

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.52  E-value=0.05  Score=37.63  Aligned_cols=77  Identities=16%  Similarity=0.293  Sum_probs=47.2

Q ss_pred             EEEecCCCchHHHHHHHHHHCC-CEEEEeeCCh-------------------HHHHHHHHHHHhc--CCeEEEEeccCCC
Q 033396           16 ALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNE-------------------TELNQRIQEWKSK--GLQVSGNACDLKI   73 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~-------------------~~~~~~~~~~~~~--~~~~~~~~~D~~~   73 (120)
                      ++|.| .||+|.++++.|+..| .++.++|.+.                   .+.+...+.+.+.  ..++..+..++++
T Consensus         2 VlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~~   80 (234)
T cd01484           2 VLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVGP   80 (234)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCCh
Confidence            56676 4899999999999999 5677776641                   1222333344443  3556666666654


Q ss_pred             HHHHH-HHHHHHHhhcCCcccEEEecCCC
Q 033396           74 RAQRE-KLMETVSSQFDGKLNILVSSAQL  101 (120)
Q Consensus        74 ~~~~~-~~~~~~~~~~~g~id~li~~ag~  101 (120)
                      +.... .++        .++|++|.+.--
T Consensus        81 ~~~~~~~f~--------~~~DvVi~a~Dn  101 (234)
T cd01484          81 EQDFNDTFF--------EQFHIIVNALDN  101 (234)
T ss_pred             hhhchHHHH--------hCCCEEEECCCC
Confidence            33221 222        467888877543

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=96.52  E-value=0.028  Score=40.69  Aligned_cols=79  Identities=16%  Similarity=0.208  Sum_probs=48.4

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCE-EEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .+.+++|.|+ +++|...+......|++ |+.+++++.+.+.+ ++   .|... ++  |..+++..+. +.+....  .
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~---~Ga~~-~i--~~~~~~~~~~-i~~~~~~--~  244 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-RE---FGATH-TV--NSSGTDPVEA-IRALTGG--F  244 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HH---cCCce-EE--cCCCcCHHHH-HHHHhCC--C
Confidence            4778999985 89999998888888985 88888877665433 22   24322 21  3333222222 2221111  2


Q ss_pred             cccEEEecCCC
Q 033396           91 KLNILVSSAQL  101 (120)
Q Consensus        91 ~id~li~~ag~  101 (120)
                      ++|++|.++|.
T Consensus       245 g~d~vid~~g~  255 (358)
T TIGR03451       245 GADVVIDAVGR  255 (358)
T ss_pred             CCCEEEECCCC
Confidence            58999998885

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.51  E-value=0.026  Score=35.38  Aligned_cols=88  Identities=14%  Similarity=0.042  Sum_probs=50.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHH--------hcCCeEEEEeccCCCHHHHHHHHHH
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWK--------SKGLQVSGNACDLKIRAQREKLMET   83 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~-~~~~~~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~   83 (120)
                      .-.+-|.|+ |-+|.++++.|.+.|+.|..+ +|+....+.....+.        +.-.+...+-.-+.| +.+..+.++
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpD-daI~~va~~   87 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPD-DAIAEVAEQ   87 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-C-CHHHHHHHH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEech-HHHHHHHHH
Confidence            445778888 889999999999999998776 455544444433321        111122233334555 357777777


Q ss_pred             HHhh--cCCcccEEEecCCCCC
Q 033396           84 VSSQ--FDGKLNILVSSAQLPY  103 (120)
Q Consensus        84 ~~~~--~~g~id~li~~ag~~~  103 (120)
                      +...  + .+=.+++|+.|-..
T Consensus        88 La~~~~~-~~g~iVvHtSGa~~  108 (127)
T PF10727_consen   88 LAQYGAW-RPGQIVVHTSGALG  108 (127)
T ss_dssp             HHCC--S--TT-EEEES-SS--
T ss_pred             HHHhccC-CCCcEEEECCCCCh
Confidence            7665  3 23358999999876

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=96.51  E-value=0.06  Score=38.89  Aligned_cols=82  Identities=18%  Similarity=0.219  Sum_probs=48.9

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .+.+++|+| ++++|..++..+...|+ +|+.+++++.....+ .+   .+... ++..+-.+.....+.+.+....  .
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~-~~---~g~~~-vi~~~~~~~~~~~~~i~~~~~~--~  248 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELA-RE---FGADA-TIDIDELPDPQRRAIVRDITGG--R  248 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HH---cCCCe-EEcCcccccHHHHHHHHHHhCC--C
Confidence            677899997 59999999988888998 898888876654322 22   24322 2211111111111222222111  3


Q ss_pred             cccEEEecCCC
Q 033396           91 KLNILVSSAQL  101 (120)
Q Consensus        91 ~id~li~~ag~  101 (120)
                      ++|+++.+.|.
T Consensus       249 ~~d~vid~~g~  259 (361)
T cd08231         249 GADVVIEASGH  259 (361)
T ss_pred             CCcEEEECCCC
Confidence            68999999874

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=96.51  E-value=0.0098  Score=42.99  Aligned_cols=76  Identities=20%  Similarity=0.261  Sum_probs=47.4

Q ss_pred             EEEecCCCchHHHHHHHHHHCC-C------EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHH-H-HHHH-H-HH
Q 033396           16 ALVTGGTKGIGYAVVEELAAFG-A------IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQ-R-EKLM-E-TV   84 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g-~------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~-~~~~-~-~~   84 (120)
                      +.|+|++|.+|..++..|+..+ +      .+++.|+++...            .......|+.+... . .... . ..
T Consensus         2 V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~------------~a~g~~~Dl~d~~~~~~~~~~~~~~~   69 (324)
T TIGR01758         2 VVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK------------VLEGVVMELMDCAFPLLDGVVPTHDP   69 (324)
T ss_pred             EEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc------------ccceeEeehhcccchhcCceeccCCh
Confidence            6899999999999999999866 2      599999864321            01122344444331 1 0000 0 11


Q ss_pred             HhhcCCcccEEEecCCCCCc
Q 033396           85 SSQFDGKLNILVSSAQLPYS  104 (120)
Q Consensus        85 ~~~~~g~id~li~~ag~~~~  104 (120)
                      .+.+ ...|++|+.||.+..
T Consensus        70 ~~~~-~~aDiVVitAG~~~~   88 (324)
T TIGR01758        70 AVAF-TDVDVAILVGAFPRK   88 (324)
T ss_pred             HHHh-CCCCEEEEcCCCCCC
Confidence            2233 679999999999763

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=96.51  E-value=0.013  Score=45.26  Aligned_cols=58  Identities=16%  Similarity=0.140  Sum_probs=43.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHH
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREK   79 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   79 (120)
                      .++|.|+ |.+|+.++++|.++|.++++.+.+++..++..+    .  ....+.+|.+|++.+++
T Consensus       419 hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~----~--g~~~i~GD~~~~~~L~~  476 (558)
T PRK10669        419 HALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE----R--GIRAVLGNAANEEIMQL  476 (558)
T ss_pred             CEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----C--CCeEEEcCCCCHHHHHh
Confidence            4566666 889999999999999999999999876554432    2  24566788888765443

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=96.51  E-value=0.03  Score=40.62  Aligned_cols=64  Identities=20%  Similarity=0.196  Sum_probs=45.6

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHH---HHHHh--cCCeEEEEeccCCC
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRI---QEWKS--KGLQVSGNACDLKI   73 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~D~~~   73 (120)
                      ..+.++++.|.|. |.||+++|+.|...|++|+..+++........   ..+.+  ...++.++.+-.+.
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~  210 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANK  210 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcH
Confidence            3578999999987 78999999999999999999998764322111   12222  24567777766554

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.51  E-value=0.012  Score=38.70  Aligned_cols=42  Identities=33%  Similarity=0.356  Sum_probs=35.8

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHH
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETEL   50 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~   50 (120)
                      ..++.++++.|.|. |.||+++++.+...|++|+.+++.....
T Consensus        31 ~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~   72 (178)
T PF02826_consen   31 GRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPE   72 (178)
T ss_dssp             BS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHH
T ss_pred             ccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChh
Confidence            34689999999987 9999999999999999999999987654

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.50  E-value=0.05  Score=36.82  Aligned_cols=39  Identities=23%  Similarity=0.298  Sum_probs=33.6

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET   48 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~   48 (120)
                      .++++|.++|.|+ |.+|..-++.|++.|++|++++....
T Consensus         5 l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~   43 (205)
T TIGR01470         5 ANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE   43 (205)
T ss_pred             EEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            4578999999998 77889999999999999999987653

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=96.50  E-value=0.066  Score=32.84  Aligned_cols=69  Identities=19%  Similarity=0.269  Sum_probs=44.1

Q ss_pred             chHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC-CcccEEEecCCCC
Q 033396           24 GIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD-GKLNILVSSAQLP  102 (120)
Q Consensus        24 ~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-g~id~li~~ag~~  102 (120)
                      ++|...+..+...|++|+.+++++.+.+.+    ++.|....   .|.++.+    +.+++.+..+ .++|++|.|+|..
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~----~~~Ga~~~---~~~~~~~----~~~~i~~~~~~~~~d~vid~~g~~   69 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELA----KELGADHV---IDYSDDD----FVEQIRELTGGRGVDVVIDCVGSG   69 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHH----HHTTESEE---EETTTSS----HHHHHHHHTTTSSEEEEEESSSSH
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHH----Hhhccccc---ccccccc----cccccccccccccceEEEEecCcH
Confidence            578888888888999999999998776433    23353222   3344333    3333334332 3799999999953


Q ss_pred             C
Q 033396          103 Y  103 (120)
Q Consensus       103 ~  103 (120)
                      .
T Consensus        70 ~   70 (130)
T PF00107_consen   70 D   70 (130)
T ss_dssp             H
T ss_pred             H
Confidence            3

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=96.49  E-value=0.047  Score=40.42  Aligned_cols=42  Identities=14%  Similarity=0.228  Sum_probs=32.8

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC---EEEEeeCChHHHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA---IVHTCSRNETELNQR   53 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~---~v~~~~~~~~~~~~~   53 (120)
                      .+.+++|.|++|++|...+..+...|+   +|+.+++++.+++..
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a  219 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARA  219 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHH
Confidence            457899999999999998776666543   799999888776544

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.48  E-value=0.044  Score=39.35  Aligned_cols=83  Identities=13%  Similarity=0.141  Sum_probs=54.3

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .|.+++|++|+|..|.-...--.-.|++|+.+..++++..-+.+++   |-...   .|...+ ++.+.+   .+..+..
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~l---GfD~~---idyk~~-d~~~~L---~~a~P~G  219 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEEL---GFDAG---IDYKAE-DFAQAL---KEACPKG  219 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhc---CCcee---eecCcc-cHHHHH---HHHCCCC
Confidence            6899999999999996544433347899999988877654444433   43221   345444 233333   3344467


Q ss_pred             ccEEEecCCCCCc
Q 033396           92 LNILVSSAQLPYS  104 (120)
Q Consensus        92 id~li~~ag~~~~  104 (120)
                      ||+-+-|+|-..+
T Consensus       220 IDvyfeNVGg~v~  232 (340)
T COG2130         220 IDVYFENVGGEVL  232 (340)
T ss_pred             eEEEEEcCCchHH
Confidence            9999999987653

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.46  E-value=0.048  Score=33.82  Aligned_cols=78  Identities=13%  Similarity=0.200  Sum_probs=53.4

Q ss_pred             EEEEecCCCchHHHHHHHHHH-CCCEEE-EeeCCh----------------------HHHHHHHHHHHhcCCeEEEEecc
Q 033396           15 TALVTGGTKGIGYAVVEELAA-FGAIVH-TCSRNE----------------------TELNQRIQEWKSKGLQVSGNACD   70 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~-~g~~v~-~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~D   70 (120)
                      .+.|.|++|-+|+.+++.+.+ .+.+++ .+++.+                      ..+++..++     .+   +..|
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-----~D---VvID   73 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-----AD---VVID   73 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH------S---EEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-----CC---EEEE
Confidence            478999999999999999999 667744 446655                      122222221     23   3469


Q ss_pred             CCCHHHHHHHHHHHHhhcCCcccEEEecCCCCC
Q 033396           71 LKIRAQREKLMETVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  103 (120)
                      +|.++.....++...++   ++.+++-+.|...
T Consensus        74 fT~p~~~~~~~~~~~~~---g~~~ViGTTG~~~  103 (124)
T PF01113_consen   74 FTNPDAVYDNLEYALKH---GVPLVIGTTGFSD  103 (124)
T ss_dssp             ES-HHHHHHHHHHHHHH---T-EEEEE-SSSHH
T ss_pred             cCChHHhHHHHHHHHhC---CCCEEEECCCCCH
Confidence            99999888888887775   5888998888865

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=96.46  E-value=0.035  Score=40.41  Aligned_cols=79  Identities=23%  Similarity=0.226  Sum_probs=49.0

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .+.+++|.|+ +++|...+..+...|+ +|+.+++++.+++.. .+   .|... +  .|..+++.    .+++.+..++
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~---~Ga~~-~--i~~~~~~~----~~~i~~~~~~  258 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-RE---LGATA-T--VNAGDPNA----VEQVRELTGG  258 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HH---cCCce-E--eCCCchhH----HHHHHHHhCC
Confidence            4678999985 8999998887777898 588888887665433 22   24322 2  23333221    2222222224


Q ss_pred             cccEEEecCCCC
Q 033396           91 KLNILVSSAQLP  102 (120)
Q Consensus        91 ~id~li~~ag~~  102 (120)
                      ++|++|.++|..
T Consensus       259 g~d~vid~~G~~  270 (371)
T cd08281         259 GVDYAFEMAGSV  270 (371)
T ss_pred             CCCEEEECCCCh
Confidence            689999888753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=96.45  E-value=0.045  Score=38.58  Aligned_cols=39  Identities=33%  Similarity=0.423  Sum_probs=33.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHH
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN   51 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~   51 (120)
                      +.+++|.|+++++|.+++......|++|++++++.++.+
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~  185 (325)
T cd05280         147 DGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQAD  185 (325)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            458999999999999999888889999998988876544

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.45  E-value=0.041  Score=37.12  Aligned_cols=39  Identities=18%  Similarity=0.206  Sum_probs=34.6

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      ..++++|.++|.|+ |.+|...++.|.+.|++|+++++..
T Consensus         5 ~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          5 MIDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            34689999999998 8899999999999999999998764

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=96.44  E-value=0.036  Score=39.32  Aligned_cols=40  Identities=15%  Similarity=0.167  Sum_probs=34.3

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN   51 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~   51 (120)
                      .+.+++|.|+++.+|..++......|++|+.+.++.....
T Consensus       140 ~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~  179 (327)
T PRK10754        140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQ  179 (327)
T ss_pred             CCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            5679999999999999999888889999998887766543

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.44  E-value=0.01  Score=42.12  Aligned_cols=43  Identities=28%  Similarity=0.442  Sum_probs=37.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQ   52 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~   52 (120)
                      +++||.++|.|.+.-+|+.++..|.++|++|.++.+....+.+
T Consensus       155 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~  197 (285)
T PRK14189        155 PLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAA  197 (285)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHH
Confidence            5799999999999999999999999999999988766544443

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.43  E-value=0.015  Score=41.31  Aligned_cols=44  Identities=23%  Similarity=0.319  Sum_probs=38.1

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR   53 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~   53 (120)
                      +++||.++|.|.+.-+|+.++..|.+++++|.++.+....+.+.
T Consensus       155 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~~~  198 (284)
T PRK14190        155 DISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLAEL  198 (284)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHHHH
Confidence            57999999999999999999999999999999987665554443

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.43  E-value=0.0077  Score=34.28  Aligned_cols=33  Identities=30%  Similarity=0.226  Sum_probs=21.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHH-HCCCEEEEeeC
Q 033396           13 GMTALVTGGTKGIGYAVVEELA-AFGAIVHTCSR   45 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~-~~g~~v~~~~~   45 (120)
                      .|.+||+|+++|.|++..-.++ ..|+..+-+..
T Consensus        39 pK~VLViGaStGyGLAsRIa~aFg~gA~TiGV~f   72 (78)
T PF12242_consen   39 PKKVLVIGASTGYGLASRIAAAFGAGADTIGVSF   72 (78)
T ss_dssp             -SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE-
T ss_pred             CceEEEEecCCcccHHHHHHHHhcCCCCEEEEee
Confidence            3899999999999999444444 45666665544

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=96.43  E-value=0.03  Score=42.49  Aligned_cols=40  Identities=25%  Similarity=0.307  Sum_probs=35.1

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE   49 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~   49 (120)
                      ..+.||+++|.|.+ .||+.+++.+...|++|+++++++..
T Consensus       250 ~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~  289 (476)
T PTZ00075        250 VMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPIC  289 (476)
T ss_pred             CCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchh
Confidence            35899999999985 69999999999999999999887644

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=96.41  E-value=0.049  Score=40.01  Aligned_cols=75  Identities=15%  Similarity=0.188  Sum_probs=51.0

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .+.++++|+|++ -+|..+++.+.+.|++|++++.++........        -..+..|..|.+.+.+++++      .
T Consensus        10 ~~~~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~a--------d~~~~~~~~d~~~l~~~~~~------~   74 (395)
T PRK09288         10 PSATRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA--------HRSHVIDMLDGDALRAVIER------E   74 (395)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchHHhh--------hheEECCCCCHHHHHHHHHH------h
Confidence            467789999875 68999999999999999999887633111110        11455677787766666543      3


Q ss_pred             cccEEEecCC
Q 033396           91 KLNILVSSAQ  100 (120)
Q Consensus        91 ~id~li~~ag  100 (120)
                      ++|.++....
T Consensus        75 ~id~vi~~~e   84 (395)
T PRK09288         75 KPDYIVPEIE   84 (395)
T ss_pred             CCCEEEEeeC
Confidence            6788776543

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=96.41  E-value=0.065  Score=39.45  Aligned_cols=39  Identities=18%  Similarity=0.176  Sum_probs=33.1

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETEL   50 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~   50 (120)
                      .+.+++|.|+++.+|.+++..+...|++++.++++..+.
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~  227 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKA  227 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHH
Confidence            467999999999999999988888999988887766544

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=96.40  E-value=0.075  Score=38.94  Aligned_cols=40  Identities=23%  Similarity=0.298  Sum_probs=34.2

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN   51 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~   51 (120)
                      .+.+++|+|+++++|.+++......|++++.++++.++.+
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~  232 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAE  232 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHH
Confidence            4679999999999999999888889999888887766554

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>PLN02494 adenosylhomocysteinase

Probab=96.38  E-value=0.033  Score=42.28  Aligned_cols=39  Identities=21%  Similarity=0.245  Sum_probs=34.8

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE   49 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~   49 (120)
                      .+.||+++|.|. |.||+.+++.+...|++|+++++++..
T Consensus       251 ~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r  289 (477)
T PLN02494        251 MIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPIC  289 (477)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchh
Confidence            468999999998 599999999999999999999888754

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=96.35  E-value=0.075  Score=37.94  Aligned_cols=73  Identities=19%  Similarity=0.365  Sum_probs=45.7

Q ss_pred             EEEecCCCchHHHHHHHHHHCC-CEEEEeeCCh-------------------HHHHHHHHHHHhc--CCeEEEEeccCCC
Q 033396           16 ALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNE-------------------TELNQRIQEWKSK--GLQVSGNACDLKI   73 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~-------------------~~~~~~~~~~~~~--~~~~~~~~~D~~~   73 (120)
                      ++|.|+ ||+|.++++.|+..| -++.++|.+.                   .+.+.+.+.+.+.  ..++..+..++.+
T Consensus         2 VlVVGa-GGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~I~~~~~~i~~   80 (291)
T cd01488           2 ILVIGA-GGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVNVTPHFGKIQD   80 (291)
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCEEEEEecccCc
Confidence            667775 899999999999999 5677776541                   2233344445443  3566666666654


Q ss_pred             HHHHHHHHHHHHhhcCCcccEEEecC
Q 033396           74 RAQREKLMETVSSQFDGKLNILVSSA   99 (120)
Q Consensus        74 ~~~~~~~~~~~~~~~~g~id~li~~a   99 (120)
                      .+  ..++        ..+|++|.+.
T Consensus        81 ~~--~~f~--------~~fdvVi~al   96 (291)
T cd01488          81 KD--EEFY--------RQFNIIICGL   96 (291)
T ss_pred             hh--HHHh--------cCCCEEEECC
Confidence            21  2222        4577777764

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=96.34  E-value=0.08  Score=38.47  Aligned_cols=80  Identities=19%  Similarity=0.206  Sum_probs=50.0

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCH-HHHHHHHHHHHhhcC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR-AQREKLMETVSSQFD   89 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   89 (120)
                      .+.+++|.|+ +++|...+......|+ +|+.++++.+..+.+ ++   .|....+   |..+. +++.+.+.+..   +
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~---~Ga~~~i---~~~~~~~~~~~~v~~~~---~  255 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KK---FGVTEFV---NPKDHDKPVQEVIAEMT---G  255 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HH---cCCceEE---cccccchhHHHHHHHHh---C
Confidence            5788999985 8999998888888998 799998887655433 22   3432211   22221 22333333332   2


Q ss_pred             CcccEEEecCCCC
Q 033396           90 GKLNILVSSAQLP  102 (120)
Q Consensus        90 g~id~li~~ag~~  102 (120)
                      +++|+++.+.|..
T Consensus       256 ~~~d~vid~~G~~  268 (369)
T cd08301         256 GGVDYSFECTGNI  268 (369)
T ss_pred             CCCCEEEECCCCh
Confidence            4688888888753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.32  E-value=0.059  Score=38.52  Aligned_cols=36  Identities=39%  Similarity=0.504  Sum_probs=31.6

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      .+.+++|.|+++++|..++......|++|+.+.+..
T Consensus       177 ~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~  212 (350)
T cd08274         177 AGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA  212 (350)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch
Confidence            578999999999999999999889999988887653

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis]

Probab=96.32  E-value=0.066  Score=35.90  Aligned_cols=64  Identities=20%  Similarity=0.095  Sum_probs=48.2

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRA   75 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   75 (120)
                      -+++|++++=.||+-|+   ++...+-.| ++|+.++.+++.++...+...+..+++.++.+|+++..
T Consensus        42 g~l~g~~V~DlG~GTG~---La~ga~~lGa~~V~~vdiD~~a~ei~r~N~~~l~g~v~f~~~dv~~~~  106 (198)
T COG2263          42 GDLEGKTVLDLGAGTGI---LAIGAALLGASRVLAVDIDPEALEIARANAEELLGDVEFVVADVSDFR  106 (198)
T ss_pred             CCcCCCEEEEcCCCcCH---HHHHHHhcCCcEEEEEecCHHHHHHHHHHHHhhCCceEEEEcchhhcC
Confidence            35799999988876554   222223346 57999999998888777777777889999999998754

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=96.31  E-value=0.057  Score=38.80  Aligned_cols=39  Identities=26%  Similarity=0.413  Sum_probs=31.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCE-EEEeeCChHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETELN   51 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~-v~~~~~~~~~~~   51 (120)
                      .+.+++|.|+ +++|..++......|++ |+.+++++.+.+
T Consensus       160 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~  199 (347)
T PRK10309        160 EGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLA  199 (347)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHH
Confidence            5789999975 99999999888889987 677777776654

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.31  E-value=0.015  Score=41.32  Aligned_cols=44  Identities=27%  Similarity=0.440  Sum_probs=38.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR   53 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~   53 (120)
                      +++||.++|.|.+.-+|+.++..|.+++++|.++.+....+++.
T Consensus       156 ~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~~  199 (285)
T PRK10792        156 DTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRHH  199 (285)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHHH
Confidence            57899999999999999999999999999999998765554433

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.30  E-value=0.042  Score=35.60  Aligned_cols=39  Identities=26%  Similarity=0.391  Sum_probs=33.6

Q ss_pred             ccccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396            7 KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus         7 ~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      -..+++++.++|.|| |-+|...++.|.+.|++|.+++..
T Consensus         7 ~~l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp~   45 (157)
T PRK06719          7 LMFNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSPE   45 (157)
T ss_pred             eEEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCc
Confidence            345689999999998 789999999999999999888643

>PRK07877 hypothetical protein; Provisional

Probab=96.30  E-value=0.066  Score=42.74  Aligned_cols=81  Identities=17%  Similarity=0.164  Sum_probs=56.5

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCC--CEEEEeeCCh------------------HHHHHHHHHHHhc--CCeEEEE
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNE------------------TELNQRIQEWKSK--GLQVSGN   67 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~------------------~~~~~~~~~~~~~--~~~~~~~   67 (120)
                      .++.+.|+|.|+ | +|..++..|+..|  -+++++|.+.                  .+.+...+.+.+.  ..++..+
T Consensus       104 ~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~  181 (722)
T PRK07877        104 RLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVF  181 (722)
T ss_pred             HHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEE
Confidence            368889999999 4 9999999999998  3788887651                  2233344445443  4567777


Q ss_pred             eccCCCHHHHHHHHHHHHhhcCCcccEEEecCCC
Q 033396           68 ACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL  101 (120)
Q Consensus        68 ~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  101 (120)
                      ...++ ++.+..++        ...|+||.|.--
T Consensus       182 ~~~i~-~~n~~~~l--------~~~DlVvD~~D~  206 (722)
T PRK07877        182 TDGLT-EDNVDAFL--------DGLDVVVEECDS  206 (722)
T ss_pred             eccCC-HHHHHHHh--------cCCCEEEECCCC
Confidence            76676 45666666        457888877644

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.27  E-value=0.015  Score=41.35  Aligned_cols=44  Identities=20%  Similarity=0.238  Sum_probs=37.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR   53 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~   53 (120)
                      +++||.++|.|.+.-+|+.++..|.+++++|.++.+....+++.
T Consensus       152 ~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~~~  195 (287)
T PRK14173        152 PLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLPAV  195 (287)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHHHH
Confidence            57999999999999999999999999999999887665554433

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.25  E-value=0.015  Score=41.26  Aligned_cols=45  Identities=22%  Similarity=0.365  Sum_probs=38.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRI   54 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~   54 (120)
                      +++||.++|.|.+.-+|+.++..|.+++++|.++.+....+++..
T Consensus       156 ~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~~~  200 (284)
T PRK14177        156 DVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPSIV  200 (284)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHH
Confidence            579999999999999999999999999999999987655554443

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.25  E-value=0.011  Score=40.52  Aligned_cols=36  Identities=19%  Similarity=0.332  Sum_probs=32.7

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCC---EEEEeeCC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGA---IVHTCSRN   46 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~---~v~~~~~~   46 (120)
                      ++++++++|.|+ |+.|..+++.|.+.|.   ++++++|+
T Consensus        22 ~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          22 KIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            578899999998 9999999999999995   59999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=96.24  E-value=0.015  Score=38.79  Aligned_cols=80  Identities=15%  Similarity=0.125  Sum_probs=55.2

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      +.++.+.++|.||+|--|..+.+++++++  .+|+++.|.+...++       ....+.....|.+..+   +..+..  
T Consensus        14 f~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~a-------t~k~v~q~~vDf~Kl~---~~a~~~--   81 (238)
T KOG4039|consen   14 FRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPA-------TDKVVAQVEVDFSKLS---QLATNE--   81 (238)
T ss_pred             HhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcc-------ccceeeeEEechHHHH---HHHhhh--
Confidence            34677889999999999999999999988  678888887533221       1334555555654433   333322  


Q ss_pred             hcCCcccEEEecCCCCC
Q 033396           87 QFDGKLNILVSSAQLPY  103 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~  103 (120)
                         -.+|+++++-|...
T Consensus        82 ---qg~dV~FcaLgTTR   95 (238)
T KOG4039|consen   82 ---QGPDVLFCALGTTR   95 (238)
T ss_pred             ---cCCceEEEeecccc
Confidence               56889888877655

>PRK06153 hypothetical protein; Provisional

Probab=96.24  E-value=0.11  Score=38.63  Aligned_cols=36  Identities=19%  Similarity=0.289  Sum_probs=30.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRN   46 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~   46 (120)
                      .++++.++|.|+ ||+|..++..|++.| -+++++|.+
T Consensus       173 kL~~~~VaIVG~-GG~GS~Va~~LAR~GVgeI~LVD~D  209 (393)
T PRK06153        173 KLEGQRIAIIGL-GGTGSYILDLVAKTPVREIHLFDGD  209 (393)
T ss_pred             HHhhCcEEEEcC-CccHHHHHHHHHHcCCCEEEEECCC
Confidence            467889999998 899999999999999 578888664

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.22  E-value=0.017  Score=40.95  Aligned_cols=44  Identities=23%  Similarity=0.370  Sum_probs=38.1

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR   53 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~   53 (120)
                      +++||.++|.|.+.-+|+.++..|.+++++|.++.+....+.+.
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~  198 (278)
T PRK14172        155 DIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEV  198 (278)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHH
Confidence            57999999999999999999999999999999997665555443

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.21  E-value=0.017  Score=40.96  Aligned_cols=43  Identities=23%  Similarity=0.336  Sum_probs=36.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQ   52 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~   52 (120)
                      +++||.++|.|.+.-+|+.++..|.+++++|.++.+....+.+
T Consensus       154 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~~  196 (281)
T PRK14183        154 DVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDLKA  196 (281)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence            5799999999999999999999999999999988655444443

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=96.21  E-value=0.063  Score=38.48  Aligned_cols=40  Identities=33%  Similarity=0.371  Sum_probs=31.3

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCE-EEEeeCChHHHH
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETELN   51 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~-v~~~~~~~~~~~   51 (120)
                      ..+.+++|.| ++++|.+++..+...|++ |+.+.+++.+.+
T Consensus       161 ~~g~~vlI~g-~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~  201 (343)
T cd05285         161 RPGDTVLVFG-AGPIGLLTAAVAKAFGATKVVVTDIDPSRLE  201 (343)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHH
Confidence            3577899986 479999998888889987 888877765543

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=96.19  E-value=0.055  Score=37.87  Aligned_cols=38  Identities=29%  Similarity=0.337  Sum_probs=30.9

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCE-EEEeeCChHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETEL   50 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~-v~~~~~~~~~~   50 (120)
                      .+.+++|.|+ +++|...+..+...|++ |+++++++.++
T Consensus       120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~  158 (280)
T TIGR03366       120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRR  158 (280)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence            6788999986 89999998888888986 88887776554

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=96.19  E-value=0.09  Score=37.72  Aligned_cols=91  Identities=25%  Similarity=0.264  Sum_probs=59.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHH-CCCEEEEe--eC-----Ch--HHH---HHHHHHHHhcCCeEEEEeccCCCHHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAA-FGAIVHTC--SR-----NE--TEL---NQRIQEWKSKGLQVSGNACDLKIRAQRE   78 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~-~g~~v~~~--~~-----~~--~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~   78 (120)
                      -.|.+||.|+++|.|.+.--..+- .|+.-+.+  .+     .+  ..+   ....+.....|--...+..|.=+-+--+
T Consensus        40 gPKkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k~  119 (398)
T COG3007          40 GPKKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMKQ  119 (398)
T ss_pred             CCceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHHH
Confidence            467899999999999885443333 33433322  22     11  111   1222233344667778888987767678


Q ss_pred             HHHHHHHhhcCCcccEEEecCCCCC
Q 033396           79 KLMETVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        79 ~~~~~~~~~~~g~id~li~~ag~~~  103 (120)
                      ++++.++..+ |.+|.+|+.-+-+.
T Consensus       120 kvIe~Ik~~~-g~vDlvvYSlAsp~  143 (398)
T COG3007         120 KVIEAIKQDF-GKVDLVVYSLASPR  143 (398)
T ss_pred             HHHHHHHHhh-ccccEEEEeccCcc
Confidence            8889999999 89999999877655

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=96.17  E-value=0.09  Score=37.58  Aligned_cols=35  Identities=34%  Similarity=0.574  Sum_probs=30.9

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      .+.+++|+|+++.+|.+++......|++|+.+.++
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~  196 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST  196 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc
Confidence            38899999999999999999888899998887754

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=96.17  E-value=0.02  Score=37.11  Aligned_cols=40  Identities=20%  Similarity=0.199  Sum_probs=31.9

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW   57 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~   57 (120)
                      ++++|+.+-+|+++|..|.++|.+|+++  +.+..+.+..++
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~   40 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEA   40 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHc
Confidence            5789999999999999999999999999  444444444444

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=96.16  E-value=0.06  Score=37.72  Aligned_cols=79  Identities=19%  Similarity=0.164  Sum_probs=47.8

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCE-EEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .+..++|.| ++++|.+++..+...|++ |+++.+.+...+ ....+   +.. .++.  - +..++.+.+.+....  .
T Consensus       129 ~~~~vlI~g-~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~-~~~~~---g~~-~~~~--~-~~~~~~~~l~~~~~~--~  197 (312)
T cd08269         129 AGKTVAVIG-AGFIGLLFLQLAAAAGARRVIAIDRRPARLA-LAREL---GAT-EVVT--D-DSEAIVERVRELTGG--A  197 (312)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHH-HHHHh---CCc-eEec--C-CCcCHHHHHHHHcCC--C
Confidence            567889996 589999999988889998 888887765544 22222   332 1211  1 112222223222211  3


Q ss_pred             cccEEEecCCC
Q 033396           91 KLNILVSSAQL  101 (120)
Q Consensus        91 ~id~li~~ag~  101 (120)
                      ++|+++++.|.
T Consensus       198 ~vd~vld~~g~  208 (312)
T cd08269         198 GADVVIEAVGH  208 (312)
T ss_pred             CCCEEEECCCC
Confidence            58999998764

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.15  E-value=0.019  Score=40.79  Aligned_cols=44  Identities=20%  Similarity=0.360  Sum_probs=37.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR   53 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~   53 (120)
                      +++||.++|.|.+.-+|+.++..|.++|++|.++.+....+++.
T Consensus       161 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~~  204 (287)
T PRK14176        161 DIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKKY  204 (287)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHHH
Confidence            57999999999999999999999999999999998665544433

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.14  E-value=0.025  Score=40.77  Aligned_cols=38  Identities=16%  Similarity=-0.018  Sum_probs=32.3

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETEL   50 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~   50 (120)
                      +.+.+.|.|+ |.+|..++..++..| +.++++|.+++.+
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~   42 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVP   42 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccc
Confidence            4567899997 889999999999988 7899999987543

>PRK14852 hypothetical protein; Provisional

Probab=96.14  E-value=0.081  Score=43.50  Aligned_cols=82  Identities=15%  Similarity=0.159  Sum_probs=54.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCCh-------------------HHHHHHHHHHHhc--CCeEEEE
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNE-------------------TELNQRIQEWKSK--GLQVSGN   67 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~-------------------~~~~~~~~~~~~~--~~~~~~~   67 (120)
                      .++...|+|.|+ ||+|..+++.|+..| -++.++|.+.                   .+.+...+.+.+.  ..++..+
T Consensus       329 kL~~srVlVvGl-GGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~  407 (989)
T PRK14852        329 RLLRSRVAIAGL-GGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSF  407 (989)
T ss_pred             HHhcCcEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEE
Confidence            467888999986 899999999999999 4677776541                   2333344455543  3555556


Q ss_pred             eccCCCHHHHHHHHHHHHhhcCCcccEEEecCCC
Q 033396           68 ACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL  101 (120)
Q Consensus        68 ~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  101 (120)
                      ...++ ++.++.++        ..+|+||.+.-.
T Consensus       408 ~~~I~-~en~~~fl--------~~~DiVVDa~D~  432 (989)
T PRK14852        408 PEGVA-AETIDAFL--------KDVDLLVDGIDF  432 (989)
T ss_pred             ecCCC-HHHHHHHh--------hCCCEEEECCCC
Confidence            55553 35556555        467888876543

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=96.13  E-value=0.085  Score=37.50  Aligned_cols=41  Identities=17%  Similarity=0.284  Sum_probs=32.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHC-CCEEEEeeCChHHHHHH
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQR   53 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~-g~~v~~~~~~~~~~~~~   53 (120)
                      +.+++|.|+++++|.+++...... |++|+.+.++++..+.+
T Consensus       149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l  190 (336)
T TIGR02817       149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWV  190 (336)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHH
Confidence            789999999999999987666656 99999998876554433

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=96.12  E-value=0.093  Score=38.14  Aligned_cols=39  Identities=23%  Similarity=0.269  Sum_probs=31.9

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELN   51 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~   51 (120)
                      .+.+++|.|+ +++|..++......|+ +|+.+++++.+.+
T Consensus       184 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~  223 (365)
T cd08277         184 PGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFE  223 (365)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHH
Confidence            5778999975 8999999888888898 6888888776654

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.12  E-value=0.02  Score=40.59  Aligned_cols=44  Identities=16%  Similarity=0.271  Sum_probs=37.6

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR   53 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~   53 (120)
                      +++||.++|.|.+.-+|+.++..|.+++++|.++.+....+++.
T Consensus       153 ~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~  196 (282)
T PRK14169        153 DVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQL  196 (282)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHHH
Confidence            57999999999999999999999999999999886655444433

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.11  E-value=0.02  Score=40.63  Aligned_cols=44  Identities=32%  Similarity=0.433  Sum_probs=37.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR   53 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~   53 (120)
                      +++||.++|.|.+.-+|+.++..|.+++++|.++.+....+.+.
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~~  198 (282)
T PRK14180        155 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSH  198 (282)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHHH
Confidence            57899999999999999999999999999999997765544433

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.11  E-value=0.02  Score=40.68  Aligned_cols=44  Identities=25%  Similarity=0.305  Sum_probs=37.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR   53 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~   53 (120)
                      +++||.++|.|.+.-+|+.++..|.+++++|.++.+....+++.
T Consensus       154 ~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~  197 (284)
T PRK14170        154 QIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQV  197 (284)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHH
Confidence            57999999999999999999999999999999887655544443

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.09  E-value=0.02  Score=40.87  Aligned_cols=45  Identities=22%  Similarity=0.245  Sum_probs=38.2

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRI   54 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~   54 (120)
                      +++||.++|.|.+.-+|+.++..|.+++++|.++.+....+++..
T Consensus       155 ~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~  199 (297)
T PRK14186        155 DIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLASIT  199 (297)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHH
Confidence            578999999999999999999999999999998876555454433

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.09  E-value=0.065  Score=40.63  Aligned_cols=78  Identities=17%  Similarity=0.127  Sum_probs=50.7

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      ...+.++.++|.|. |+.|.++++.|.+.|+.|.+.+++.....+.   +...|..+  +..+- +++    .+      
T Consensus        10 ~~~~~~~~v~v~G~-G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~---l~~~gi~~--~~~~~-~~~----~~------   72 (473)
T PRK00141         10 LPQELSGRVLVAGA-GVSGRGIAAMLSELGCDVVVADDNETARHKL---IEVTGVAD--ISTAE-ASD----QL------   72 (473)
T ss_pred             cccccCCeEEEEcc-CHHHHHHHHHHHHCCCEEEEECCChHHHHHH---HHhcCcEE--EeCCC-chh----Hh------
Confidence            34567788999985 8899999999999999999999865443221   22224332  22111 111    12      


Q ss_pred             cCCcccEEEecCCCCCc
Q 033396           88 FDGKLNILVSSAQLPYS  104 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~  104 (120)
                        ...|.||.+.|+...
T Consensus        73 --~~~d~vV~Spgi~~~   87 (473)
T PRK00141         73 --DSFSLVVTSPGWRPD   87 (473)
T ss_pred             --cCCCEEEeCCCCCCC
Confidence              346888999888764

>cd08230 glucose_DH Glucose dehydrogenase

Probab=96.05  E-value=0.085  Score=38.11  Aligned_cols=75  Identities=17%  Similarity=0.240  Sum_probs=47.4

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC---hHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN---ETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .+++++|+|+ |++|...+..+...|++|+.++++   +.+.+ ..   ++.|...  +  |..+.+ +..     ....
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~-~~---~~~Ga~~--v--~~~~~~-~~~-----~~~~  236 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD-IV---EELGATY--V--NSSKTP-VAE-----VKLV  236 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HH---HHcCCEE--e--cCCccc-hhh-----hhhc
Confidence            5788999986 999999998777789999999884   33332 22   2335432  1  332221 111     1112


Q ss_pred             CCcccEEEecCCCC
Q 033396           89 DGKLNILVSSAQLP  102 (120)
Q Consensus        89 ~g~id~li~~ag~~  102 (120)
                       +.+|++|.++|..
T Consensus       237 -~~~d~vid~~g~~  249 (355)
T cd08230         237 -GEFDLIIEATGVP  249 (355)
T ss_pred             -CCCCEEEECcCCH
Confidence             5689999988853

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.04  E-value=0.02  Score=40.71  Aligned_cols=41  Identities=24%  Similarity=0.297  Sum_probs=35.4

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETEL   50 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~   50 (120)
                      +++||.++|.|.++-+|..++..|.++|++|.++......+
T Consensus       155 ~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l  195 (284)
T PRK14179        155 ELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNL  195 (284)
T ss_pred             CCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCH
Confidence            57999999999999999999999999999999984443333

>smart00829 PKS_ER Enoylreductase

Probab=96.04  E-value=0.089  Score=35.97  Aligned_cols=41  Identities=20%  Similarity=0.331  Sum_probs=34.7

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQ   52 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~   52 (120)
                      .+.+++|.|+++++|..++......|++|+.+.++......
T Consensus       104 ~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  144 (288)
T smart00829      104 PGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDF  144 (288)
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            57789999999999999988888899999999887765543

Enoylreductase in Polyketide synthases.

>PLN02928 oxidoreductase family protein

Probab=96.03  E-value=0.037  Score=40.38  Aligned_cols=36  Identities=28%  Similarity=0.463  Sum_probs=33.6

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      ++.||++.|.|. |.||+.+++.+...|++|+.+++.
T Consensus       156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~  191 (347)
T PLN02928        156 TLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRS  191 (347)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCC
Confidence            588999999998 999999999999999999999886

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=96.02  E-value=0.079  Score=37.75  Aligned_cols=78  Identities=19%  Similarity=0.203  Sum_probs=47.4

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .+.+++|.|+ +++|.+++..+...| .+|+.+.+++.+.+.+ .+   .+.. ..  .+..+.  +...+.+....  .
T Consensus       167 ~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~-~~---~g~~-~~--~~~~~~--~~~~i~~~~~~--~  234 (340)
T cd05284         167 PGSTVVVIGV-GGLGHIAVQILRALTPATVIAVDRSEEALKLA-ER---LGAD-HV--LNASDD--VVEEVRELTGG--R  234 (340)
T ss_pred             CCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHH-HH---hCCc-EE--EcCCcc--HHHHHHHHhCC--C
Confidence            5788999995 559999988888888 8999888876654433 32   2322 11  122221  22222222111  3


Q ss_pred             cccEEEecCCC
Q 033396           91 KLNILVSSAQL  101 (120)
Q Consensus        91 ~id~li~~ag~  101 (120)
                      ++|+++.+.|.
T Consensus       235 ~~dvvld~~g~  245 (340)
T cd05284         235 GADAVIDFVGS  245 (340)
T ss_pred             CCCEEEEcCCC
Confidence            58999988874

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=96.02  E-value=0.028  Score=39.67  Aligned_cols=44  Identities=20%  Similarity=0.223  Sum_probs=36.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHH
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEW   57 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~   57 (120)
                      ++.++|.|+ ||-+++++..|++.|+ +|.+++|+.++.+++.+.+
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            467888886 9999999999999996 5999999988777665543

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.02  E-value=0.026  Score=42.40  Aligned_cols=37  Identities=24%  Similarity=0.258  Sum_probs=32.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHH
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN   51 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~   51 (120)
                      ++.|.||.|.+|.++++.|.+.|.+|++++|+++...
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~   38 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGK   38 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHH
Confidence            5789999999999999999999999999999876543

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.02  E-value=0.023  Score=40.48  Aligned_cols=44  Identities=18%  Similarity=0.301  Sum_probs=38.0

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR   53 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~   53 (120)
                      +++||.++|.|.+.-+|+.++..|.+++++|.++.+....+++.
T Consensus       156 ~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~~~  199 (288)
T PRK14171        156 NLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLSSI  199 (288)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHH
Confidence            57999999999999999999999999999999887655555443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	120
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		3e-32
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		4e-32
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		3e-29
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		3e-29
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		4e-10
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		3e-09
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		3e-09
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		1e-08
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		1e-08
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		1e-08
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		1e-08
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		1e-08
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		1e-08
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		4e-08
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		5e-08
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		5e-08
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		1e-07
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		2e-07
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		1e-06
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		8e-06
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		1e-05
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		2e-05
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-05
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		2e-05
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		4e-05
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		4e-05
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		5e-05
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		5e-05
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		5e-05
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		6e-05
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		7e-05
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		1e-04
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		1e-04
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		1e-04
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		1e-04
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		1e-04
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		2e-04
2pfg_A	276	Crystal Structure Of Human Cbr1 In Complex With Big		2e-04
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		2e-04
1wma_A	276	Crystal Structure Of Human Cbr1 In Complex With Hyd		2e-04
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		2e-04
4imr_A	275	Crystal Structure Of 3-oxoacyl (acyl-carrier-protei		2e-04
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		2e-04
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		3e-04
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		3e-04
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		5e-04
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-04
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		6e-04
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		6e-04
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		6e-04
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		7e-04
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		7e-04
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		7e-04
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		8e-04
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		8e-04
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		8e-04
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		8e-04
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		8e-04

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score =  132 bits (333), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 80/111 (72%), Gaps = 7/111 (6%)
Query: 5   REKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQV 64
           + +RWSLK  T LVTGGTKGIG+A+VEE A FGA++HTC+RNE ELN+ + +W+ KG QV
Sbjct: 6   QSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQV 65
Query: 65  SGNACDLKIRAQREKLMETVSSQFDGKLNILV-------SSAQLPYSQRKF 108
           +G+ CD  +R +REKLM+TVSS F GKL+IL+       S   L Y+   F
Sbjct: 66  TGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDF 116

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score =  132 bits (333), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 63/99 (63%), Positives = 79/99 (79%)
Query: 1   MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
           M+   E RWSLKG TALVTGG+KGIGYA+VEELA  GA V+TCSRNE EL++ ++ W+ K
Sbjct: 9   MNCNNEGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK 68
Query: 61  GLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           GL V G+ CDL  R +R+KLM+TV+  FDGKLNILV++A
Sbjct: 69  GLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNA 107

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score =  123 bits (308), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 54/94 (57%), Positives = 76/94 (80%)
Query: 8   RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGN 67
           RW+L+G TALVTGG++GIGY +VEELA+ GA V+TCSRN+ ELN  + +W+SKG +V  +
Sbjct: 4   RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEAS 63
Query: 68  ACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL 101
            CDL  R++R++LM TV++ F GKLNILV++A +
Sbjct: 64  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGI 97

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score =  122 bits (307), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 54/94 (57%), Positives = 76/94 (80%)
Query: 8   RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGN 67
           RW+L+G TALVTGG++GIGY +VEELA+ GA V+TCSRN+ ELN  + +W+SKG +V  +
Sbjct: 3   RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEAS 62
Query: 68  ACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL 101
            CDL  R++R++LM TV++ F GKLNILV++A +
Sbjct: 63  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGI 96

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 7   KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSG 66
           +R  L    ALVT  T GIG+A+   LA  GA V   SR +  ++Q +   + +GL V+G
Sbjct: 9   RRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTG 68
Query: 67  NACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL-PY 103
             C +     RE+L+ T + +  G ++ILVS+A + P+
Sbjct: 69  TVCHVGKAEDRERLVAT-AVKLHGGIDILVSNAAVNPF 105

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 6   EKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVS 65
           E+R  L+   ALVT  T GIG A+   LA  GA V   SR +  +++ +   + +GL V+
Sbjct: 7   ERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVT 66
Query: 66  GNACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL-PY 103
           G  C +     RE+L+  ++    G ++ILVS+A + P+
Sbjct: 67  GTVCHVGKAEDRERLV-AMAVNLHGGVDILVSNAAVNPF 104

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Query: 9   WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGN 67
           + L+G  ALVTGG++G+G+ + + LA  G  V   SRN  E ++  Q+   K G++    
Sbjct: 17  FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAF 76
Query: 68  ACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL 101
            CD+    + +KL+E V  +F GKL+ +V++A +
Sbjct: 77  RCDVSNYEEVKKLLEAVKEKF-GKLDTVVNAAGI 109

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 16  ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRA 75
           ALVTG T GIG  +   L   G  V  C+R E  L   ++E +  G++  G  CD++   
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 76  QREKLMETVSSQFDGKLNILVSSAQLP 102
           + E L+  V  ++ G +++LV++A  P
Sbjct: 89  EIEALVAAVVERY-GPVDVLVNNAGRP 114

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 16  ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRA 75
           ALVTG T GIG  +   L   G  V  C+R E  L   ++E +  G++  G  CD++   
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 76  QREKLMETVSSQFDGKLNILVSSAQLP 102
           + E L+  V  ++ G +++LV++A  P
Sbjct: 89  EIEALVAAVVERY-GPVDVLVNNAGRP 114

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 16  ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRA 75
           ALVTG T GIG  +   L   G  V  C+R E  L   ++E +  G++  G  CD++   
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 76  QREKLMETVSSQFDGKLNILVSSAQLP 102
           + E L+  V  ++ G +++LV++A  P
Sbjct: 89  EIEALVAAVVERY-GPVDVLVNNAGRP 114

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 16  ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRA 75
           ALVTG T GIG  +   L   G  V  C+R E  L   ++E +  G++  G  CD++   
Sbjct: 25  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 84
Query: 76  QREKLMETVSSQFDGKLNILVSSAQLP 102
           + E L+  V  ++ G +++LV++A  P
Sbjct: 85  EIEALVAAVVERY-GPVDVLVNNAGRP 110

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 16  ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRA 75
           ALVTG T GIG  +   L   G  V  C+R E  L   ++E +  G++  G  CD++   
Sbjct: 9   ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 68
Query: 76  QREKLMETVSSQFDGKLNILVSSAQLP 102
           + E L+  V  ++ G +++LV++A  P
Sbjct: 69  EIEALVAAVVERY-GPVDVLVNNAGRP 94

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 16  ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRA 75
           ALVTG T GIG  +   L   G  V  C+R E  L   ++E +  G++  G  CD++   
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 76  QREKLMETVSSQFDGKLNILVSSAQLP 102
           + E L+  V  ++ G +++LV++A  P
Sbjct: 89  EIEALVAAVVERY-GPVDVLVNNAGRP 114

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 4   FREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ 63
           F   ++SLKG  ALVTG + GIG+A+    A  GA +     N+  +++ +  +K+ G+ 
Sbjct: 25  FSLDQFSLKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGIN 84
Query: 64  VSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL 101
             G  CD+      + ++  + S+  G ++ILV++A +
Sbjct: 85  AHGYVCDVTDEDGIQAMVAQIESEV-GIIDILVNNAGI 121

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 16  ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRA 75
           ALVTG T GIG  +   L   G  V  C+R E  L   ++E +  G++  G  CD++   
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 76  QREKLMETVSSQFDGKLNILVSSA 99
           + E L+  V  ++ G +++LV++A
Sbjct: 89  EIEALVAAVVERY-GPVDVLVNNA 111

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 16  ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRA 75
           ALVTG T GIG  +   L   G  V  C+R E  L   ++E +  G++  G  CD++   
Sbjct: 25  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 84
Query: 76  QREKLMETVSSQFDGKLNILVSSA 99
           + E L+  V  ++ G +++LV++A
Sbjct: 85  EIEALVAAVVERY-GPVDVLVNNA 107

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           LKG TA+VTG ++G+G A+  +L   GA IV   S   T L+   +E+K+ G+ V     
Sbjct: 3   LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKG 62
Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSAQL 101
           D+K     E +++T    F G+++ILV++A +
Sbjct: 63  DVKNPEDVENMVKTAMDAF-GRIDILVNNAGI 93

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 15  TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR 74
           TA VTG + GIG AV   LAA G  V+ C+R+   ++  +   ++ G  V G++CD+   
Sbjct: 26  TAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTST 85
Query: 75  AQREKLMETVSSQFDGKLNILVSSA 99
            +    +     +F G + ILV+SA
Sbjct: 86  DEVHAAVAAAVERF-GPIGILVNSA 109

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          + G   +VTG ++GIG  +  +L   GA V+   R+   L    QE +S G Q     CD
Sbjct: 3  MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCD 62
Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
              ++   L E V  +  G+L++LV++A
Sbjct: 63 SSQESEVRSLFEQVDREQQGRLDVLVNNA 91

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 9   WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
           + L G TALVTG  +G+G+A  E LAA GA V       T L + +     KG    G A
Sbjct: 5   FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVA 64
Query: 69  CDLKIRAQREKLMETVSSQFDGK---LNILVSSAQLPY 103
            D+      E  +E   S+ D +   ++IL+++A + Y
Sbjct: 65  FDVT----DELAIEAAFSKLDAEGIHVDILINNAGIQY 98

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRI--QEWKSKGLQVSGN 67
           SL G TA VTGG++GIG A+ + LA  GA V     N  E  Q +  +  ++ G  V+  
Sbjct: 28  SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIR 87
Query: 68  ACDLKIRAQREKLMETVSSQFDGKLNILVSSAQLPYS 104
           A +    A  + + ETV +   G L+ILV+SA + +S
Sbjct: 88  ADNRDAEAIEQAIRETVEAL--GGLDILVNSAGIWHS 122

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 31/50 (62%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
          LKG TALVTG T GIG A+   L A GA V    R E  +N+ I+E +++
Sbjct: 8  LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQ 57

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           +L    A+VTG ++GIG A+  ELA  GA+V   +  E         +K  GL+  G   
Sbjct: 25  TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVL 84
Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSAQLPYSQRKFFVK 111
           ++      + L+E+   +F G LN+LV++A +   Q    +K
Sbjct: 85  NVNDATAVDALVESTLKEF-GALNVLVNNAGITQDQLAMRMK 125

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
          LKG  ALVTG ++GIG A+  +LA  GA +V   + NE + N+ + E K  G        
Sbjct: 2  LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61
Query: 70 DLKIRAQREKLMETVSSQFD--GKLNILVSSA 99
          D+   A  E +   V    D  G+++ILV++A
Sbjct: 62 DV---ANAEDVTNMVKQTVDVFGQVDILVNNA 90

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 21/104 (20%)
Query: 7  KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN-------ETELNQRIQEWKS 59
          K + L    A+VTGG+ GIG A VE L   GA V  C+R+       E+ L QR      
Sbjct: 2  KPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRF----- 56
Query: 60 KGLQVSGNACD----LKIRAQREKLMETVSSQFDGKLNILVSSA 99
           G ++  + CD    L++RA  E    T+     G  +ILV++A
Sbjct: 57 PGARLFASVCDVLDALQVRAFAEACERTL-----GCASILVNNA 95

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 39/71 (54%)
Query: 1  MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
          + D  +   SL G  A+VTG ++GIG A+  +L + GA V   +R+  +L    +E  + 
Sbjct: 17 IDDDDKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA 76
Query: 61 GLQVSGNACDL 71
          G +   +ACDL
Sbjct: 77 GGEAESHACDL 87

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 10/96 (10%)
Query: 9   WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW---KSKGLQVS 65
            + +G  ALVTG ++GIG A+ E LAA GA V   + +E    Q I ++     KGL + 
Sbjct: 1   MNFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGA-QAISDYLGANGKGLML- 58
Query: 66  GNACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL 101
            N  D    A  E ++E + ++F G+++ILV++A +
Sbjct: 59  -NVTD---PASIESVLEKIRAEF-GEVDILVNNAGI 89

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 10/96 (10%)
Query: 9   WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW---KSKGLQVS 65
            + +G  ALVTG ++GIG A+ E LAA GA V   + +E    Q I ++     KGL + 
Sbjct: 1   MNFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGA-QAISDYLGANGKGLML- 58
Query: 66  GNACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL 101
            N  D    A  E ++E + ++F G+++ILV++A +
Sbjct: 59  -NVTD---PASIESVLEKIRAEF-GEVDILVNNAGI 89

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 10/96 (10%)
Query: 9   WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW---KSKGLQVS 65
            + +G  ALVTG ++GIG A+ E LAA GA V   + +E    Q I ++     KGL + 
Sbjct: 1   MNFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGA-QAISDYLGANGKGLML- 58
Query: 66  GNACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL 101
            N  D    A  E ++E + ++F G+++ILV++A +
Sbjct: 59  -NVTD---PASIESVLEKIRAEF-GEVDILVNNAGI 89

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK-----SKGLQVS 65
           L+G  A+VTGG  GIG A+V+EL   G+ V   SR    L     E +     +K  +V 
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75
Query: 66  GNACDLKIRAQREKLMETVSSQFDGKLNILVSSAQLPYSQRKFFVKSRG 114
              C+++   +   L+++    F GK+N LV++    +      + S+G
Sbjct: 76  PIQCNIRNEEEVNNLVKSTLDTF-GKINFLVNNGGGQFLSPAEHISSKG 123

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 7   KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSG 66
           ++  L    A+VTGG + IG A V  LA  GA V     +E    + +++ + +G  VS 
Sbjct: 7   EKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSS 66
Query: 67  NACDLKIRAQREKLMETVSSQFDGKLNILVSSAQLPYSQRK 107
              D+      +  + +V  Q +G+++ILV+ A +  S+ K
Sbjct: 67  VVMDVTNTESVQNAVRSVHEQ-EGRVDILVACAGICISEVK 106

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 13/112 (11%)
Query: 1   MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
           M+ F EK        A++TG + GIG A     A  GA V    R+   L +  Q+  + 
Sbjct: 1   MTRFAEK-------VAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAA 53
Query: 61  GL---QVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSS--AQLPYSQRK 107
           G+    V+    D+   A +++++ T   +F GKL+ILV++  A +P SQ K
Sbjct: 54  GVSEQNVNSVVADVTTDAGQDEILSTTLGKF-GKLDILVNNAGAAIPDSQSK 104

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGNAC 69
          + G  A++TG + GIG A+ E  A  GA +   +R    L++  +  K K G++V   A 
Sbjct: 5  ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D+      + ++E+V S F G  +ILV++A
Sbjct: 65 DVATPEGVDAVVESVRSSFGGA-DILVNNA 93

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGNAC 69
          + G  A++TG + GIG A+ E  A  GA +   +R    L++  +  K K G++V   A 
Sbjct: 5  ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D+      + ++E+V S F G  +ILV++A
Sbjct: 65 DVATPEGVDAVVESVRSSFGGA-DILVNNA 93

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 9   WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
           +SL G  ALVTGG++GIG  + + L   GA V  C+R+            + G       
Sbjct: 25  FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIP 83
Query: 69  CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            DL   A   +L + +  +   +L+ILV++A
Sbjct: 84  ADLSSEAGARRLAQAL-GELSARLDILVNNA 113

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           +LKG TALVTG T GIG  + + LA  GA  +       +    + E    G++   +  
Sbjct: 1   TLKGKTALVTGSTSGIGLGIAQVLARAGA--NIVLNGFGDPAPALAEIARHGVKAVHHPA 58
Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSAQLPY 103
           DL   AQ E L      +F G ++ILV++A + +
Sbjct: 59  DLSDVAQIEALFALAEREF-GGVDILVNNAGIQH 91

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 9/118 (7%)
Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
             G  A+VTGG  GIG A   E A  GA +     ++  L Q +   + +G    G  CD
Sbjct: 29  FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCD 88
Query: 71  LKIRAQREKLMETVSSQFDGKLNILVSSAQL----PYSQRKF----FVKSRGPYGSIH 120
           ++   +  +L +  + +  G ++++ S+A +    P +Q       +V     +GSIH
Sbjct: 89  VRHLDEMVRLADE-AFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIH 145

>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Query: 15  TALVTGGTKGIGYAVVEELA-AFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLK- 72
            ALVTGG KGIG A+V +L   F   V   +R+ T     +Q+ +++GL    +  D+  
Sbjct: 6   VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD 65
Query: 73  ---IRAQREKLMETVSSQFDGKLNILVSSAQLPY 103
              IRA R+ L +       G L++LV++A + +
Sbjct: 66  LQSIRALRDFLRKEY-----GGLDVLVNNAGIAF 94

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Query: 4  FREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ 63
          F      L G  A++TG   GIG  +    A  GA V     N    N  + E +  G Q
Sbjct: 2  FNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ 61
Query: 64 VSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
               CD+    +   L +   S+  GK++ILV++A
Sbjct: 62 AFACRCDITSEQELSALADFAISKL-GKVDILVNNA 96

>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Query: 15  TALVTGGTKGIGYAVVEELA-AFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLK- 72
            ALVTGG KGIG A+V +L   F   V   +R+ T     +Q+ +++GL    +  D+  
Sbjct: 6   VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD 65
Query: 73  ---IRAQREKLMETVSSQFDGKLNILVSSAQLPY 103
              IRA R+ L +       G L++LV++A + +
Sbjct: 66  LQSIRALRDFLRKEY-----GGLDVLVNNAGIAF 94

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 9  WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
          + L G TALVTG ++G+G A+ E LA  GA +     + + + Q +QE+++ G      A
Sbjct: 22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVA 81
Query: 69 CDL 71
           D+
Sbjct: 82 FDV 84

>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 51/104 (49%), Gaps = 15/104 (14%)
Query: 6   EKRWSLKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNET-ELNQRI-------Q 55
           E  + L+G TALVTG ++GIG A+ E LA  GA  I+H      T  + QRI       Q
Sbjct: 26  ETIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQ 85
Query: 56  EWKSKGLQVSGNACDLKIRAQR----EKLMETVSSQFDGKLNIL 95
           E     L  +G   DL  RA+     + L+   S+Q +  L+ L
Sbjct: 86  ELAGD-LSEAGAGTDLIERAEAIAPVDILVINASAQINATLSAL 128

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 9  WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL-QVSGN 67
          + L+G + +VTGGTKGIG  +    A  GA V    R+  +++  + +    G  +V G 
Sbjct: 6  FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGV 65
Query: 68 ACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            D+  RAQ + L      +F G ++++ ++A
Sbjct: 66 QTDVSDRAQCDALAGRAVEEF-GGIDVVCANA 96

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIV--HTCSRNETELNQRIQEWKSKGLQVSGNA 68
          LKG  ALVTG ++GIG A+ + LA  GA+V  H  +R E E  + + E +S G    G+A
Sbjct: 5  LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKE-EAEETVYEIQSNG----GSA 59
Query: 69 CDLKIRAQREKL--METVSSQFDGKL 92
              I A  E L  +E + S  D +L
Sbjct: 60 --FSIGANLESLHGVEALYSSLDNEL 83

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           SLK    +VTG   GIG A+ ++ A   +IV      E  LNQ +QE +  G +V G   
Sbjct: 4   SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKA 63
Query: 70  DLKIRAQREKLMETVSSQFD--GKLNILVSSAQL 101
           D+   ++++ + E V   F+   ++++L ++A +
Sbjct: 64  DV---SKKKDVEEFVRRTFETYSRIDVLCNNAGI 94

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGNAC 69
           L+G  +LVTG T+GIG A+ E+LA+ G+ V     +        +E  +K G++  G   
Sbjct: 5   LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEM 64
Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSAQLPYSQRKFFVK 111
           +L       K  E + +  DG ++ILV++A +  ++ K F++
Sbjct: 65  NLLSEESINKAFEEIYNLVDG-IDILVNNAGI--TRDKLFLR 103

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 8/101 (7%)
Query: 1   MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
           MS F     +L+G  ALVTG ++GIG A+ E LA  GA V   + +E+   Q I ++   
Sbjct: 4   MSQF----MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGA-QAISDY--L 56
Query: 61  GLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL 101
           G    G A ++      E +++ ++ +F G ++ILV++A +
Sbjct: 57  GDNGKGMALNVTNPESIEAVLKAITDEF-GGVDILVNNADI 96

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 37/65 (56%)
Query: 7  KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSG 66
          +  SL+G  ALVTG ++GIG A+  EL   GA+V   + + +   +  +  K+ G++ +G
Sbjct: 21 QSMSLQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAG 80
Query: 67 NACDL 71
             D+
Sbjct: 81 LVLDV 85

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ-VSGNACDLKIR 74
          A+VTGG KGIG+ + ++L++ G +V    R+ T+ ++ +++ K+   + V  +  D+   
Sbjct: 15 AVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDP 74
Query: 75 -AQREKLMETVSSQFDGKLNILVSSA 99
           A    L + + + F GKL+ILV++A
Sbjct: 75 IATMSSLADFIKTHF-GKLDILVNNA 99

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 38.9 bits (89), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 8/101 (7%)
Query: 1   MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
           MS F     +L+G  ALVTG ++GIG A+ E LA  GA V   + +E+   Q I ++   
Sbjct: 4   MSQF----MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGA-QAISDY--L 56
Query: 61  GLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL 101
           G    G A ++      E +++ ++ +F G ++ILV++A +
Sbjct: 57  GDNGKGMALNVTNPESIEAVLKAITDEFGG-VDILVNNAAI 96

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 4/92 (4%)
Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           +L+G  ALVTG ++GIG A+ E LA  GA V   + +E+   Q I ++   G    G A 
Sbjct: 6   NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGA-QAISDY--LGDNGKGXAL 62
Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSAQL 101
           ++      E +++ ++ +F G ++ILV++A +
Sbjct: 63  NVTNPESIEAVLKAITDEFGG-VDILVNNAGI 93

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTC--SRNETELNQRIQEWKSKGLQVSGN 67
           SLKG  A VTG + GIG+AV E  A  GA V     S    E  + +Q  K+ G+     
Sbjct: 31  SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQ--KTYGVHSKAY 88
Query: 68  ACDLKIRAQREKLMETVSSQFD--GKLNILVSSAQLPYSQ 105
            C++   +  + + ET+S Q    G +++ V++A + ++Q
Sbjct: 89  KCNI---SDPKSVEETISQQEKDFGTIDVFVANAGVTWTQ 125

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR-IQEWKSKGLQVSGNAC 69
           L G  ALVTG  +GIG AV   L   GA V     N T+  ++ + E K+ G        
Sbjct: 16  LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA 75
Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           D++   +  KL +   + F G L+I VS++
Sbjct: 76  DIRQVPEIVKLFDQAVAHF-GHLDIAVSNS 104

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR-IQEWKSKGLQVSGNAC 69
           L G  ALVTG  +GIG AV   L   GA V     N T+  ++ + E K+ G        
Sbjct: 16  LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA 75
Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           D++   +  KL +   + F G L+I VS++
Sbjct: 76  DIRQVPEIVKLFDQAVAHF-GHLDIAVSNS 104

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 49/117 (41%), Gaps = 13/117 (11%)
Query: 16  ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRA 75
           AL+TG   GIG A    LAA G  V    R  TE+ +   E    G Q      D+    
Sbjct: 31  ALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDEL 90
Query: 76  QREKLMETVSSQFDGKLNILVSSAQL-----PYSQRKFF-------VKSRGPYGSIH 120
           Q    +  +  +F G L+I+V++A +     P    K F       V  RG + ++H
Sbjct: 91  QXRNAVRDLVLKF-GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLH 146

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 8/101 (7%)
Query: 1   MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
           MS F     +L+G  ALVTG ++GIG A+ E LA  GA V   + +E+   Q I ++   
Sbjct: 4   MSQF----MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGA-QAISDY--L 56
Query: 61  GLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL 101
           G    G A ++      E +++ ++ +F G ++ILV++A +
Sbjct: 57  GDNGKGMALNVTNPESIEAVLKAITDEFGG-VDILVNNAGI 96

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 8/101 (7%)
Query: 1   MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
           MS F     +L+G  ALVTG ++GIG A+ E LA  GA V   + +E+   Q I ++   
Sbjct: 4   MSQF----MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGA-QAISDY--L 56
Query: 61  GLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL 101
           G    G A ++      E +++ ++ +F G ++ILV++A +
Sbjct: 57  GDNGKGMALNVTNPESIEAVLKAITDEFGG-VDILVNNAGI 96

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 38.5 bits (88), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 8/101 (7%)
Query: 1   MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
           MS F     +L+G  ALVTG ++GIG A+ E LA  GA V   + +E+   Q I ++   
Sbjct: 4   MSQF----MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGA-QAISDY--L 56
Query: 61  GLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL 101
           G    G A ++      E +++ ++ +F G ++ILV++A +
Sbjct: 57  GDNGKGMALNVTNPESIEAVLKAITDEFGG-VDILVNNAGI 96

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	120
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	2e-45
1xq1_A	266	Putative tropinone reducatse; structural genomics,	9e-45
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	9e-44
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	2e-22
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	3e-20
3imf_A	257	Short chain dehydrogenase; structural genomics, in	4e-20
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	2e-19
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	7e-19
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	9e-19
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	1e-18
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	2e-18
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	3e-18
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	3e-18
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	4e-18
3cxt_A	291	Dehydrogenase with different specificities; rossma	5e-18
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	5e-18
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	1e-17
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	1e-17
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	1e-17
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	1e-17
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	2e-17
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	2e-17
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	3e-17
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	3e-17
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	3e-17
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	3e-17
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	5e-17
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	5e-17
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	5e-17
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	5e-17
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	6e-17
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	7e-17
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	7e-17
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	8e-17
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	1e-16
3rih_A	293	Short chain dehydrogenase or reductase; structural	1e-16
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	1e-16
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	1e-16
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	1e-16
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	2e-16
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	2e-16
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	2e-16
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	2e-16
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	2e-16
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	2e-16
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	3e-16
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	4e-16
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	4e-16
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	4e-16
1xhl_A	297	Short-chain dehydrogenase/reductase family member	6e-16
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	7e-16
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	7e-16
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	7e-16
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	7e-16
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	1e-15
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	1e-15
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	2e-15
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	2e-15
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	2e-15
1xkq_A	280	Short-chain reductase family member (5D234); parra	2e-15
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	2e-15
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	3e-15
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	3e-15
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	3e-15
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	3e-15
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	4e-15
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	4e-15
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	4e-15
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	7e-15
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	7e-15
1spx_A	278	Short-chain reductase family member (5L265); paral	7e-15
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	9e-15
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	1e-14
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	1e-14
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	1e-14
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	2e-14
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	2e-14
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	2e-14
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	2e-14
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	2e-14
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	2e-14
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	2e-14
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	2e-14
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-14
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	4e-14
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-14
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	5e-14
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	5e-14
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	6e-14
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	6e-14
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	7e-14
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	8e-14
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	9e-14
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	9e-14
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	9e-14
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	1e-13
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	1e-13
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	1e-13
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	1e-13
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	1e-13
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	2e-13
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	2e-13
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	2e-13
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	2e-13
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	2e-13
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	3e-13
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	3e-13
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	3e-13
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	3e-13
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	4e-13
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	5e-13
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	5e-13
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	6e-13
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	7e-13
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	7e-13
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	9e-13
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	1e-12
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	1e-12
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	1e-12
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	1e-12
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	2e-12
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	2e-12
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	2e-12
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	2e-12
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	2e-12
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	2e-12
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	2e-12
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	3e-12
4dqx_A	277	Probable oxidoreductase protein; structural genomi	3e-12
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	3e-12
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	4e-12
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	4e-12
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	4e-12
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	5e-12
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	6e-12
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	7e-12
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	7e-12
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	7e-12
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	1e-11
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	2e-11
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	2e-11
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	2e-11
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	2e-11
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	2e-11
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	3e-11
4e4y_A	244	Short chain dehydrogenase family protein; structur	3e-11
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	5e-11
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	7e-11
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	7e-11
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	7e-11
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	9e-11
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	1e-10
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	1e-10
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	2e-10
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	2e-10
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	2e-10
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	2e-10
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	3e-10
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	3e-10
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	3e-10
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	5e-10
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	5e-10
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	1e-09
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	1e-09
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	2e-09
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	2e-09
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	3e-09
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	3e-09
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	4e-09
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	5e-09
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	1e-08
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	8e-08
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	1e-07
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	1e-07
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	1e-07
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	2e-07
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	2e-07
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	3e-07
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	9e-07
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	1e-06
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	3e-06
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	3e-06
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	3e-06
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-06
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	5e-06
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	7e-06
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	1e-05
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	6e-05
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	7e-05
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	1e-04
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	1e-04
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	2e-04
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	3e-04
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	4e-04
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	5e-04
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	5e-04
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	7e-04
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	8e-04
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	8e-04

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  146 bits (372), Expect = 2e-45
 Identities = 63/99 (63%), Positives = 79/99 (79%)

Query: 1   MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
           M+   E RWSLKG TALVTGG+KGIGYA+VEELA  GA V+TCSRNE EL++ ++ W+ K
Sbjct: 9   MNCNNEGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK 68

Query: 61  GLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           GL V G+ CDL  R +R+KLM+TV+  FDGKLNILV++A
Sbjct: 69  GLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNA 107

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  145 bits (368), Expect = 9e-45
 Identities = 57/98 (58%), Positives = 77/98 (78%)

Query: 2   SDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG 61
              + +RWSLK  T LVTGGTKGIG+A+VEE A FGA++HTC+RNE ELN+ + +W+ KG
Sbjct: 3   GAEQSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG 62

Query: 62  LQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            QV+G+ CD  +R +REKLM+TVSS F GKL+IL+++ 
Sbjct: 63  FQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNL 100

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  142 bits (361), Expect = 9e-44
 Identities = 54/93 (58%), Positives = 75/93 (80%)

Query: 7  KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSG 66
           RW+L+G TALVTGG++GIGY +VEELA+ GA V+TCSRN+ ELN  + +W+SKG +V  
Sbjct: 3  GRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEA 62

Query: 67 NACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          + CDL  R++R++LM TV++ F GKLNILV++A
Sbjct: 63 SVCDLSSRSERQELMNTVANHFHGKLNILVNNA 95

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score = 87.2 bits (217), Expect = 2e-22
 Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 1/94 (1%)

Query: 6  EKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVS 65
          E+R  L+   ALVT  T GIG A+   LA  GA V   SR +  +++ +   + +GL V+
Sbjct: 7  ERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVT 66

Query: 66 GNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          G  C +     RE+L+    +   G ++ILVS+A
Sbjct: 67 GTVCHVGKAEDRERLVAMAVNLH-GGVDILVSNA 99

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score = 81.4 bits (202), Expect = 3e-20
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 2/91 (2%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGNA 68
           + G  A++TG + GIG A+ E  A  GA +   +R    L++  +  K K G++V   A
Sbjct: 4  GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVA 63

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           D+      + ++E+V S F G  +ILV++A
Sbjct: 64 VDVATPEGVDAVVESVRSSF-GGADILVNNA 93

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 81.0 bits (201), Expect = 4e-20
 Identities = 22/90 (24%), Positives = 47/90 (52%), Gaps = 1/90 (1%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
          ++K    ++TGG+ G+G  +    A  GA V    R + +L +   E +    Q+     
Sbjct: 3  AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQM 62

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D++     +K++E +  +F G+++IL+++A
Sbjct: 63 DVRNTDDIQKMIEQIDEKF-GRIDILINNA 91

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 79.6 bits (197), Expect = 2e-19
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 1/90 (1%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           +     ALVTG T GIG  +   L   G  V  C+R E  L   ++E +  G++  G  C
Sbjct: 19  TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTC 78

Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           D++   + E L+  V  ++ G +++LV++A
Sbjct: 79  DVRSVPEIEALVAAVVERY-GPVDVLVNNA 107

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 77.9 bits (193), Expect = 7e-19
 Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 1/90 (1%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           L G TALVTG  +G+G+A  E LAA GA V       T L + +     KG    G A 
Sbjct: 6  DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAF 65

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D+      E     + ++    ++IL+++A
Sbjct: 66 DVTDELAIEAAFSKLDAEG-IHVDILINNA 94

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 78.1 bits (193), Expect = 9e-19
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 1/89 (1%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
            +  TA VTG + GIG AV   LAA G  V+ C+R+   ++  +   ++ G  V G++CD
Sbjct: 22  SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCD 81

Query: 71  LKIRAQREKLMETVSSQFDGKLNILVSSA 99
           +    +    +     +F G + ILV+SA
Sbjct: 82  VTSTDEVHAAVAAAVERF-GPIGILVNSA 109

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 77.6 bits (192), Expect = 1e-18
 Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 1/93 (1%)

Query: 7  KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSG 66
          ++  L    A+VTGG + IG A V  LA  GA V     +E    + +++ + +G  VS 
Sbjct: 7  EKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSS 66

Query: 67 NACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
             D+      +  + +V  Q  G+++ILV+ A
Sbjct: 67 VVMDVTNTESVQNAVRSVHEQE-GRVDILVACA 98

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 77.2 bits (191), Expect = 2e-18
 Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 1/90 (1%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
             +   ALVTG  +GIG  + + LA   + V   SR +   +  + E KS G + SG A 
Sbjct: 41  CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAG 100

Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           D+  + +  +++  + ++    ++ILV++A
Sbjct: 101 DVSKKEEISEVINKILTEH-KNVDILVNNA 129

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score = 76.4 bits (189), Expect = 3e-18
 Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 8/101 (7%)

Query: 1  MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE--WK 58
          M  +      L    A+VTGG+ GIG A VE L   GA V  C+R+   L         +
Sbjct: 1  MKPY-----DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQR 55

Query: 59 SKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            G ++  + CD+    Q     E       G  +ILV++A
Sbjct: 56 FPGARLFASVCDVLDALQVRAFAEACERTL-GCASILVNNA 95

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 76.0 bits (188), Expect = 3e-18
 Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 1/90 (1%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
          SL    ALVTG ++GIG+ V   LA+ GA V   + ++    +     K KG +  G   
Sbjct: 2  SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVL 61

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          ++      +     + ++    ++ILV++A
Sbjct: 62 NISDIESIQNFFAEIKAEN-LAIDILVNNA 90

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score = 76.0 bits (188), Expect = 4e-18
 Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 4/95 (4%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS--KGLQVSGN 67
            ++G  A+VT G+ G+G+A   ELA  GA +   SRN  +L        S   G QV   
Sbjct: 4   GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIV 63

Query: 68  ACDLKIRAQREKLMETVSSQFDGKLNILVSSAQLP 102
           A D++     ++L E       G  +ILV S   P
Sbjct: 64  AGDIREPGDIDRLFEKARD--LGGADILVYSTGGP 96

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 76.1 bits (188), Expect = 5e-18
 Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 2/91 (2%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGNA 68
           S +G  A +TGG  G+G  +   L++ GA     SR    L    ++  S+ G +V    
Sbjct: 23  SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQ 82

Query: 69  CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           CD++     +  +  +     G  NI++++A
Sbjct: 83  CDVRDPDMVQNTVSELIKVA-GHPNIVINNA 112

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 74.9 bits (185), Expect = 1e-17
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 1/90 (1%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           +L    A+VTG ++GIG A+  ELA  GA+V   +  E         +K  GL+  G   
Sbjct: 25  TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVL 84

Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           ++      + L+E+   +F G LN+LV++A
Sbjct: 85  NVNDATAVDALVESTLKEF-GALNVLVNNA 113

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 74.4 bits (184), Expect = 1e-17
 Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 2/91 (2%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
           LKG TA+VTG ++G+G A+  +L   GA IV   S   T L+   +E+K+ G+ V    
Sbjct: 2  QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAK 61

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           D+K     E +++T    F G+++ILV++A
Sbjct: 62 GDVKNPEDVENMVKTAMDAF-GRIDILVNNA 91

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score = 74.5 bits (184), Expect = 1e-17
 Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 7/89 (7%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ--VSGN 67
           LKG TALVTG T GIG A+   L A GA V    R E  +N+ I+E +++     +   
Sbjct: 7  QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPV 66

Query: 68 ACDLKIRAQREKLMETVSSQFDGKLNILV 96
            DL      + ++E        K++IL+
Sbjct: 67 VADLGTEQGCQDVIEKY-----PKVDILI 90

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 75.0 bits (185), Expect = 1e-17
 Identities = 19/90 (21%), Positives = 40/90 (44%), Gaps = 2/90 (2%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE-WKSKGLQVSGNAC 69
           L+   A +TGG  GIG+ + E     G      SR+   +    ++   + G +    + 
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSM 84

Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           D++        ++    +F G+++IL++ A
Sbjct: 85  DVRAPPAVMAAVDQALKEF-GRIDILINCA 113

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 74.1 bits (183), Expect = 2e-17
 Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 1/90 (1%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           L    A+VTG   GIG A+    A  GA V                 +  G +  G  C
Sbjct: 9  HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLEC 68

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          ++     RE +++    QF GK+ +LV++A
Sbjct: 69 NVTDEQHREAVIKAALDQF-GKITVLVNNA 97

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 74.1 bits (183), Expect = 2e-17
 Identities = 33/100 (33%), Positives = 57/100 (57%), Gaps = 2/100 (2%)

Query: 1   MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
                ++ + L+G  ALVTGG++G+G+ + + LA  G  V   SRN  E ++  Q+   K
Sbjct: 9   HHHHMKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEK 68

Query: 61  -GLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            G++     CD+    + +KL+E V  +F GKL+ +V++A
Sbjct: 69  YGVETMAFRCDVSNYEEVKKLLEAVKEKF-GKLDTVVNAA 107

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 74.1 bits (183), Expect = 3e-17
 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 4/93 (4%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN---QRIQEWKSKGLQVSG 66
          S +  T LVTGG  GIG  V   L A GA V    RN  +L    Q ++   + G  +  
Sbjct: 8  SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRY 67

Query: 67 NACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
             D+    +  + ++ V++   G+L+ +V  A
Sbjct: 68 EPTDITNEDETARAVDAVTAWH-GRLHGVVHCA 99

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 73.7 bits (182), Expect = 3e-17
 Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 2/91 (2%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
                AL+T GTKG+G  V E+L A G  +  T   + T +    + +K    ++    
Sbjct: 4  GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQ 63

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           D+  +    K++E   S F GK++ L+++A
Sbjct: 64 ADVTKKEDLHKIVEEAMSHF-GKIDFLINNA 93

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 73.7 bits (182), Expect = 3e-17
 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 1/90 (1%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
            L G  AL+TG + GIG  V    A  GA V   +R+   L     E    G +     C
Sbjct: 29  DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRC 88

Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           D+    Q   +++ ++ +  G ++I V +A
Sbjct: 89  DVTQPDQVRGMLDQMTGEL-GGIDIAVCNA 117

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 73.8 bits (182), Expect = 3e-17
 Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 2/87 (2%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           SL G  ALVTGG++GIG  + + L   GA V  C+R+            + G        
Sbjct: 26  SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPA 84

Query: 70  DLKIRAQREKLMETVSSQFDGKLNILV 96
           DL   A   +L + +      +L+ILV
Sbjct: 85  DLSSEAGARRLAQALGELS-ARLDILV 110

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 73.0 bits (180), Expect = 5e-17
 Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 3/90 (3%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
          +LKG TALVTG T GIG  + + LA  GA +      +      + E    G++   +  
Sbjct: 1  TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA--PALAEIARHGVKAVHHPA 58

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          DL   AQ E L      +F G ++ILV++A
Sbjct: 59 DLSDVAQIEALFALAEREF-GGVDILVNNA 87

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score = 72.9 bits (180), Expect = 5e-17
 Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 1/96 (1%)

Query: 4  FREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ 63
          F      L G  A++TG   GIG  +    A  GA V     N    N  + E +  G Q
Sbjct: 2  FNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ 61

Query: 64 VSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
               CD+    +   L +   S+  GK++ILV++A
Sbjct: 62 AFACRCDITSEQELSALADFAISKL-GKVDILVNNA 96

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 72.9 bits (180), Expect = 5e-17
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 2/90 (2%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
          LKG  ALVTG ++GIG A+  +LA  GA +V   + NE + N+ + E K  G        
Sbjct: 2  LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D+        +++     F G+++ILV++A
Sbjct: 62 DVANAEDVTNMVKQTVDVF-GQVDILVNNA 90

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 73.4 bits (181), Expect = 5e-17
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 1/90 (1%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           SLKG  A VTG + GIG+AV E  A  GA V     +     +     K+ G+      C
Sbjct: 31  SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKC 90

Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           ++      E+ +      F G +++ V++A
Sbjct: 91  NISDPKSVEETISQQEKDF-GTIDVFVANA 119

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 72.6 bits (179), Expect = 6e-17
 Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 2/91 (2%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGNA 68
           L+G + +VTGGTKGIG  +    A  GA V    R+  +++  + +       +V G  
Sbjct: 7  DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQ 66

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           D+  RAQ + L      +F G ++++ ++A
Sbjct: 67 TDVSDRAQCDALAGRAVEEF-GGIDVVCANA 96

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 72.6 bits (179), Expect = 7e-17
 Identities = 21/100 (21%), Positives = 46/100 (46%), Gaps = 2/100 (2%)

Query: 1  MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKS 59
          M+        +    A VTGG  GIG ++ + L   G  +V  C  N     + +++ K+
Sbjct: 1  MAHHHHHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKA 60

Query: 60 KGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           G     +  ++      ++  + V ++  G++++LV++A
Sbjct: 61 LGFDFYASEGNVGDWDSTKQAFDKVKAEV-GEIDVLVNNA 99

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 72.1 bits (178), Expect = 7e-17
 Identities = 24/90 (26%), Positives = 50/90 (55%), Gaps = 2/90 (2%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
              +ALVTG ++GIG ++  +LA  G  +    + ++ +    ++E K+KG+       
Sbjct: 2  KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQA 61

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          ++    + + +++ V SQF G L++LV++A
Sbjct: 62 NVADADEVKAMIKEVVSQF-GSLDVLVNNA 90

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 72.6 bits (179), Expect = 8e-17
 Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 7/100 (7%)

Query: 1   MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKS 59
           M+        L    ALVTG ++GIG A+  ELAA GA +    + +    ++ +    +
Sbjct: 21  MTAL-----PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAA 75

Query: 60  KGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            G +      D+   ++ E L   V  ++ G+L++LV++A
Sbjct: 76  AGGEAFAVKADVSQESEVEALFAAVIERW-GRLDVLVNNA 114

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 72.3 bits (178), Expect = 1e-16
 Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 6/92 (6%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE-----WKSKGLQV 64
            L+G  A+VTGG  GIG A+V+EL   G+ V   SR    L     E       +K  +V
Sbjct: 15  LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARV 74

Query: 65  SGNACDLKIRAQREKLMETVSSQFDGKLNILV 96
               C+++   +   L+++    F GK+N LV
Sbjct: 75  IPIQCNIRNEEEVNNLVKSTLDTF-GKINFLV 105

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 72.3 bits (178), Expect = 1e-16
 Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 2/91 (2%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGNA 68
            L   + LVTGGTKGIG  +    A  GA V   +R+  EL+    E        V G  
Sbjct: 38  DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVR 97

Query: 69  CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            D+           TV   F G L+++ ++A
Sbjct: 98  LDVSDPGSCADAARTVVDAF-GALDVVCANA 127

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 72.2 bits (178), Expect = 1e-16
 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 3/90 (3%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           SL G TA+VTG   GIG A+    A  GA V    R +  + +   E    G        
Sbjct: 28  SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD-GVKEVADEIADGGGSAEAVVA 86

Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           DL        + E +++    ++++LV++A
Sbjct: 87  DLADLEGAANVAEELAA--TRRVDVLVNNA 114

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 71.8 bits (177), Expect = 1e-16
 Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 2/91 (2%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE-WKSKGLQVSGNA 68
           S    T +VTGG +GIG A    +AA GA V    R+  +  +  ++  K  G++     
Sbjct: 11  SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 70

Query: 69  CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           CD+       K ++ + +   G ++ L+++A
Sbjct: 71  CDVSNTDIVTKTIQQIDADL-GPISGLIANA 100

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 71.8 bits (177), Expect = 1e-16
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 1/90 (1%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           SL G  A+VTG ++GIG A+  +L + GA V   +R+  +L    +E  + G +   +AC
Sbjct: 26  SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHAC 85

Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           DL            V +   G+ ++LV++A
Sbjct: 86  DLSHSDAIAAFATGVLAAH-GRCDVLVNNA 114

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 71.9 bits (177), Expect = 2e-16
 Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 2/91 (2%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
                 A+VTGG +GIG  +   LAA G  I  T   +   +   I E    G +V    
Sbjct: 26  QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLR 85

Query: 69  CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            DL   +  +  ++ V ++F G+++ LV++A
Sbjct: 86  ADLADLSSHQATVDAVVAEF-GRIDCLVNNA 115

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 71.4 bits (176), Expect = 2e-16
 Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 2/91 (2%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
           L+G  +LVTG T+GIG A+ E+LA+ G+ ++ T +  E       +     G++  G  
Sbjct: 4  KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVE 63

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           +L       K  E + +     ++ILV++A
Sbjct: 64 MNLLSEESINKAFEEIYNLV-DGIDILVNNA 93

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score = 71.4 bits (176), Expect = 2e-16
 Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 4/102 (3%)

Query: 1   MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
           M D+      LKG   LVTG  +GIG A     AA GA V    R E  L +   + KS 
Sbjct: 2   MFDYSAHPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSA 61

Query: 61  GLQ---VSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           G     +     +     Q  +L   V  +F G+L+ L+ +A
Sbjct: 62  GQPQPLIIALNLENATAQQYRELAARVEHEF-GRLDGLLHNA 102

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 71.4 bits (176), Expect = 2e-16
 Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 6/90 (6%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           LK    L+TG   GIG A +E  A  GA +  C   E  L +  +   +  +       
Sbjct: 2  RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVV-----M 56

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D+   A  E+      +   G+L+ +V  A
Sbjct: 57 DVADPASVERGFAEALAHL-GRLDGVVHYA 85

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 71.4 bits (176), Expect = 2e-16
 Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 1/89 (1%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
            G   LVTG    IG A    LA  G  +     N   L +     + KG++     CD
Sbjct: 5  FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 64

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +         +++V   F GK++ L ++A
Sbjct: 65 VTSEEAVIGTVDSVVRDF-GKIDFLFNNA 92

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 71.4 bits (176), Expect = 2e-16
 Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 7/97 (7%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGN-- 67
            L+   ALVTG   GIG AV   LA  GA V  C  +     + ++     G +      
Sbjct: 4   RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRG 63

Query: 68  -----ACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
                  D+        L+E V + F    +++VS A
Sbjct: 64  NHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCA 100

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 71.0 bits (175), Expect = 3e-16
 Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 4/90 (4%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           L G  A+VTGG+KGIG A+   L   GA V     +       +   ++ G  V     
Sbjct: 9  DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAV---EV 65

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D+  RA  +  M+       G  ++L ++A
Sbjct: 66 DVTKRASVDAAMQKAIDAL-GGFDLLCANA 94

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 70.6 bits (174), Expect = 4e-16
 Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 4/89 (4%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          L G TALVTG  +GIG A+   LAA GA V     N              G +    A D
Sbjct: 4  LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKKARAIAAD 60

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +      + L   + +   G ++ILV++A
Sbjct: 61 ISDPGSVKALFAEIQALT-GGIDILVNNA 88

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score = 70.6 bits (174), Expect = 4e-16
 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 4/89 (4%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
           +G  A+V GGT G+G A V  L   GA V    RNE+ + +  +E    G +V     D
Sbjct: 6  YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREE---FGPRVHALRSD 62

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +    +   L         G +++L  +A
Sbjct: 63 IADLNEIAVLGAAAGQTL-GAIDLLHINA 90

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 70.7 bits (174), Expect = 4e-16
 Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 2/90 (2%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
                A VTGG  G+G A+   L   G  +  + S     ++  +   +  G      A 
Sbjct: 23  QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAV 82

Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           D+      E+  E V + F GK+++L+++A
Sbjct: 83  DVADFESCERCAEKVLADF-GKVDVLINNA 111

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score = 70.3 bits (173), Expect = 6e-16
 Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 4/92 (4%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ---VSGN 67
             G + ++TG + GIG +     A  GA V    RNE  L +  Q+    G+    ++  
Sbjct: 24  FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 83

Query: 68  ACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
             D+   + ++ ++ T  ++F GK++ILV++A
Sbjct: 84  VADVTEASGQDDIINTTLAKF-GKIDILVNNA 114

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 69.9 bits (172), Expect = 7e-16
 Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 4/90 (4%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
            L G  ALVTG T GIG A+     A GAIV      E +L +   +    G  V   + 
Sbjct: 24  KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAAD---LGKDVFVFSA 80

Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           +L  R   ++L E    +    ++ILV++A
Sbjct: 81  NLSDRKSIKQLAEVAEREM-EGIDILVNNA 109

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 70.4 bits (173), Expect = 7e-16
 Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 3/92 (3%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE--WKSKGLQVSGN 67
           S+   TA++TG T GIG A+   LA  GA +        +  + + +         V  +
Sbjct: 22  SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHH 81

Query: 68  ACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
             D+   ++   +M  V+ +F G  +ILV++A
Sbjct: 82  PADMTKPSEIADMMAMVADRF-GGADILVNNA 112

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score = 69.9 bits (172), Expect = 7e-16
 Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 2/91 (2%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE-WKSKGLQVSGNA 68
            L G  AL+TG TKGIG  +    AA GA +    R+ +EL+   +   +  G  V   A
Sbjct: 17  RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVA 76

Query: 69  CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            DL       +L    +  F G L++LV++A
Sbjct: 77  IDLAEPDAPAELARRAAEAF-GGLDVLVNNA 106

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 70.0 bits (172), Expect = 7e-16
 Identities = 28/90 (31%), Positives = 45/90 (50%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           + G   +VTG ++GIG  +  +L   GA V+   R+   L    QE +S G Q     C
Sbjct: 2  PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVC 61

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D    ++   L E V  +  G+L++LV++A
Sbjct: 62 DSSQESEVRSLFEQVDREQQGRLDVLVNNA 91

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score = 69.4 bits (171), Expect = 1e-15
 Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 1/90 (1%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
          SLK    +VTG   GIG A+ ++ A   +IV      E  LNQ +QE +  G +V G   
Sbjct: 4  SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKA 63

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D+  +   E+ +      +  ++++L ++A
Sbjct: 64 DVSKKKDVEEFVRRTFETY-SRIDVLCNNA 92

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 69.1 bits (170), Expect = 1e-15
 Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 4/90 (4%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
          +L+G  ALVTG ++GIG A+ E LA  GA V   + +E+            G  ++ N  
Sbjct: 6  NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVT 65

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +       E +++ ++ +F G ++ILV++A
Sbjct: 66 N---PESIEAVLKAITDEF-GGVDILVNNA 91

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score = 69.2 bits (170), Expect = 2e-15
 Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 1/96 (1%)

Query: 4   FREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ 63
             ++R S+ G   L+TG   GIG     E A   + +     N+  L +   + K  G +
Sbjct: 22  MPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAK 81

Query: 64  VSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           V     D   R       + V ++  G ++ILV++A
Sbjct: 82  VHTFVVDCSNREDIYSSAKKVKAEI-GDVSILVNNA 116

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 68.7 bits (169), Expect = 2e-15
 Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 2/90 (2%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           +   ALVTG ++G+G A    LA  G  IV   +R++    +  +E +  G++V     
Sbjct: 2  EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKA 61

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          ++   A+ +++ + +   F G+L++ V++A
Sbjct: 62 NVGQPAKIKEMFQQIDETF-GRLDVFVNNA 90

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 69.1 bits (170), Expect = 2e-15
 Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 4/89 (4%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          L G T LVTG   GIG A ++  A  GA +    R E  L + +        +      D
Sbjct: 4  LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA---LEAEAIAVVAD 60

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +      E +      +F G+L+ +   A
Sbjct: 61 VSDPKAVEAVFAEALEEF-GRLHGVAHFA 88

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score = 69.2 bits (170), Expect = 2e-15
 Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 4/92 (4%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL---QVSGN 67
              T ++TG + GIG       A  GA V    R+   L +  Q     G+   QV+  
Sbjct: 4  FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 63

Query: 68 ACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            D+     +++++ +   QF GK+++LV++A
Sbjct: 64 VADVTTEDGQDQIINSTLKQF-GKIDVLVNNA 94

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 69.6 bits (171), Expect = 2e-15
 Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 7/88 (7%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
           L G  A+VTG  +GIG  + E  A  GA  +         +L +   +     L      
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALT----- 265

Query: 69  CDLKIRAQREKLMETVSSQFDGKLNILV 96
            D+      +K+   V+    GK++ILV
Sbjct: 266 LDVTADDAVDKITAHVTEHHGGKVDILV 293

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 68.3 bits (168), Expect = 3e-15
 Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 2/88 (2%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
           LKG   L+TG ++GIG A     A  GA +     +    +++ I   ++ G   +  A
Sbjct: 4  DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFA 63

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILV 96
           DL      ++L++   ++F G +++L+
Sbjct: 64 ADLATSEACQQLVDEFVAKF-GGIDVLI 90

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 68.4 bits (168), Expect = 3e-15
 Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 3/91 (3%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE--WKSKGLQVSGNA 68
          LKG  A+VTG T GIG  +   LAA GA +      +    ++++       G++V  + 
Sbjct: 2  LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           DL        L++    Q  G+++ILV++A
Sbjct: 62 ADLSKGEAVRGLVDNAVRQM-GRIDILVNNA 91

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 67.9 bits (167), Expect = 3e-15
 Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
          +  G+ ALVTG  KGIG   V+ L A GA V   +R  ++L    +E       +     
Sbjct: 4  NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE----CPGIEPVCV 59

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          DL      EK +  +     G +++LV++A
Sbjct: 60 DLGDWDATEKALGGI-----GPVDLLVNNA 84

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 67.9 bits (167), Expect = 3e-15
 Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 4/93 (4%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIV---HTCSRNETELNQRIQEWKSKGLQVSG 66
           LK    ++ GG K +G    +  A     +   +  +++    N+   E + +G +V+ 
Sbjct: 8  DLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVAL 67

Query: 67 NACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
             DL    +  KL +    +F GK++I +++ 
Sbjct: 68 YQSDLSNEEEVAKLFDFAEKEF-GKVDIAINTV 99

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 67.9 bits (167), Expect = 4e-15
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           L G   LVTG  KGIG   V+ L A GA V   SR + +L+  ++E       +     
Sbjct: 4  FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE----CPGIEPVCV 59

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          DL      E+ + +V     G +++LV++A
Sbjct: 60 DLGDWEATERALGSV-----GPVDLLVNNA 84

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 67.5 bits (166), Expect = 4e-15
 Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 1/90 (1%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
            +    +VTG   GIG A  E LA  GA V     N        ++  + G      A 
Sbjct: 6  RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAV 65

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D+      + + +   ++F G ++ LV++A
Sbjct: 66 DVSDPESAKAMADRTLAEF-GGIDYLVNNA 94

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score = 68.0 bits (167), Expect = 4e-15
 Identities = 15/89 (16%), Positives = 37/89 (41%), Gaps = 1/89 (1%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          L     +++G    +G  +    A  GA +   +R    L    ++    G +      D
Sbjct: 9  LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTD 68

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +   AQ   L++     + G++++++++A
Sbjct: 69 ITDDAQVAHLVDETMKAY-GRVDVVINNA 96

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 67.2 bits (165), Expect = 7e-15
 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 2/91 (2%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
                 A+VTG ++GIG A+   LA+ G  +V   +       +   + ++ G +     
Sbjct: 24  METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQ 83

Query: 69  CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            D+   A   +L  T    F G +++LV++A
Sbjct: 84  ADVSDPAAVRRLFATAEEAF-GGVDVLVNNA 113

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 67.1 bits (165), Expect = 7e-15
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 3/89 (3%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          LK   A++TGG  GIG A+ E  A  GA +           +     ++ G +V    CD
Sbjct: 5  LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLGRRVLTVKCD 62

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +      E   + V S F G+ +ILV++A
Sbjct: 63 VSQPGDVEAFGKQVISTF-GRCDILVNNA 90

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score = 67.2 bits (165), Expect = 7e-15
 Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 4/92 (4%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN---QRIQEWKSKGLQVSGN 67
               A++TG + GIG A     A  GA V    R+   L    Q+I         V+  
Sbjct: 4  FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 63

Query: 68 ACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            D+   A +++++ T   +F GKL+ILV++A
Sbjct: 64 VADVTTDAGQDEILSTTLGKF-GKLDILVNNA 94

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 66.8 bits (164), Expect = 9e-15
 Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 11/90 (12%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
             G    VTG  KGIGYA        GA V    +  T+          +    +    
Sbjct: 4  DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ----------EQYPFATEVM 53

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D+   AQ  ++ + + ++   +L+ LV++A
Sbjct: 54 DVADAAQVAQVCQRLLAET-ERLDALVNAA 82

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score = 66.8 bits (164), Expect = 1e-14
 Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 4/89 (4%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
           L    A++TG T GIG A  +   A GA V    R +  L+  I E    G    G   D
Sbjct: 27  LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAE---IGGGAVGIQAD 83

Query: 71  LKIRAQREKLMETVSSQFDGKLNILVSSA 99
               A+ ++L E V ++  G++++L  +A
Sbjct: 84  SANLAELDRLYEKVKAEA-GRIDVLFVNA 111

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 66.4 bits (163), Expect = 1e-14
 Identities = 20/86 (23%), Positives = 43/86 (50%), Gaps = 2/86 (2%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKI 73
            +VTG ++GIG A+   L   G  ++   +R+     +  ++ ++ G Q      D+  
Sbjct: 3  VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK 62

Query: 74 RAQREKLMETVSSQFDGKLNILVSSA 99
           A  E +M+T    + G ++++V++A
Sbjct: 63 EADVEAMMKTAIDAW-GTIDVVVNNA 87

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 66.4 bits (163), Expect = 1e-14
 Identities = 23/90 (25%), Positives = 33/90 (36%), Gaps = 4/90 (4%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           L G  A VTG   GIG  +    AA GA +    R    L++  QE        +    
Sbjct: 8  RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQE--LGAAVAARIVA 65

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D+              +     ++ILV+SA
Sbjct: 66 DVTDAEAMTAAAAEAEA--VAPVSILVNSA 93

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score = 66.0 bits (162), Expect = 2e-14
 Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 4/92 (4%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGNAC 69
           L     LVTG + GIG       A +GA V    RNE +L Q       + G Q      
Sbjct: 10  LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 69

Query: 70  DLKI--RAQREKLMETVSSQFDGKLNILVSSA 99
           DL        ++L + ++  +  +L+ ++ +A
Sbjct: 70  DLLTCTSENCQQLAQRIAVNY-PRLDGVLHNA 100

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 66.0 bits (162), Expect = 2e-14
 Identities = 22/90 (24%), Positives = 46/90 (51%), Gaps = 2/90 (2%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
          L+G   ++TG + G+G ++    A   A +V      E E N  ++E K  G +      
Sbjct: 5  LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D+ + +    L+++   +F GKL++++++A
Sbjct: 65 DVTVESDVINLVQSAIKEF-GKLDVMINNA 93

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 65.8 bits (161), Expect = 2e-14
 Identities = 16/92 (17%), Positives = 34/92 (36%), Gaps = 3/92 (3%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
           L     +      GIG     EL            R E        +  +  + ++ + 
Sbjct: 2  DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 69 CDLKI-RAQREKLMETVSSQFDGKLNILVSSA 99
           D+ +  A+ +KL++ +  Q    ++IL++ A
Sbjct: 62 YDVTVPVAESKKLLKKIFDQL-KTVDILINGA 92

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score = 65.7 bits (161), Expect = 2e-14
 Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 4/93 (4%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN---QRIQEWKSKGLQVSG 66
            +   A++TG ++GIG  +   LA  G  V   +R++  L      I        +   
Sbjct: 4  EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIV 63

Query: 67 NACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
             D+    + +  ++ +  ++ G ++ILV++A
Sbjct: 64 LPLDITDCTKADTEIKDIHQKY-GAVDILVNAA 95

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 66.0 bits (162), Expect = 2e-14
 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 5/94 (5%)

Query: 10  SLKGMTALVTG--GTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQE-WKSKGLQVS 65
           SLKG   +VTG  G KG+G       A  GA +  T +       + ++E  K+ G++  
Sbjct: 17  SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAK 76

Query: 66  GNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
              C +      EKL++ V + F G+++  +++A
Sbjct: 77  AYKCQVDSYESCEKLVKDVVADF-GQIDAFIANA 109

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 65.6 bits (161), Expect = 2e-14
 Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 16/93 (17%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
            ++    LV   ++GIG AV + L+  GA V  C+RNE  L +    +           C
Sbjct: 16  GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY---------VVC 66

Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSAQLP 102
           DL       K ++ +  +   +++ILV +A  P
Sbjct: 67  DL------RKDLDLLFEKV-KEVDILVLNAGGP 92

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score = 66.1 bits (162), Expect = 2e-14
 Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 1/90 (1%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           +     AL+TG   GIG A    LAA G  V    R  TE+ +   E    G Q      
Sbjct: 25  NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEA 84

Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           D+    Q    +  +  +F G L+I+V++A
Sbjct: 85  DVSDELQMRNAVRDLVLKF-GHLDIVVANA 113

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 65.7 bits (161), Expect = 3e-14
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 2/95 (2%)

Query: 6   EKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQV 64
           + + S +G  ALVTGG  G+G  + + L+A G  V    R    L+    E   + G  V
Sbjct: 26  QGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIV 85

Query: 65  SGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
               CD+    Q   L   V ++F  +L++LV++A
Sbjct: 86  RAVVCDVGDPDQVAALFAAVRAEF-ARLDLLVNNA 119

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 65.0 bits (159), Expect = 4e-14
 Identities = 22/89 (24%), Positives = 46/89 (51%), Gaps = 6/89 (6%)

Query: 13 GMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          G   LVTG ++GIG ++V+ L +     +V+  +R+E  L +  +++  +   V     D
Sbjct: 2  GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYV---VGD 58

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +   +  ++L+        GK++ LV++A
Sbjct: 59 ITEDSVLKQLVNAAVKGH-GKIDSLVANA 86

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 65.3 bits (160), Expect = 4e-14
 Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 2/91 (2%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
           SL G TA VTGG++GIG A+ + LA  GA +  T           + E +  G +     
Sbjct: 28  SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIR 87

Query: 69  CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            D +     E+ +        G L+ILV+SA
Sbjct: 88  ADNRDAEAIEQAIRETVEAL-GGLDILVNSA 117

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 64.9 bits (159), Expect = 5e-14
 Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 2/91 (2%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
            L G  AL TG  +GIG  +  EL   GA +V     +     + + E K  G Q     
Sbjct: 18  PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQ 77

Query: 69  CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            D+   ++   L +   S F G L+ ++S++
Sbjct: 78  ADISKPSEVVALFDKAVSHF-GGLDFVMSNS 107

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 65.4 bits (159), Expect = 5e-14
 Identities = 28/92 (30%), Positives = 52/92 (56%), Gaps = 3/92 (3%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL-QVSGNA 68
            K   A+VTGG KGIG+ + ++L++ G +V    R+ T+ ++ +++ K+     V  + 
Sbjct: 9  VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQ 68

Query: 69 CDL-KIRAQREKLMETVSSQFDGKLNILVSSA 99
           D+    A    L + + + F GKL+ILV++A
Sbjct: 69 LDVTDPIATMSSLADFIKTHF-GKLDILVNNA 99

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 64.9 bits (159), Expect = 6e-14
 Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 2/91 (2%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
           SL+G  ALVTG  +GIG  +  EL   G  ++   + +     + +   K  G   +   
Sbjct: 26  SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVK 85

Query: 69  CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            ++ +     ++ E     F GKL+I+ S++
Sbjct: 86  ANVGVVEDIVRMFEEAVKIF-GKLDIVCSNS 115

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 64.6 bits (158), Expect = 6e-14
 Identities = 15/93 (16%), Positives = 30/93 (32%), Gaps = 13/93 (13%)

Query: 7  KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSG 66
           R S      LV GG+  +G  VV+   +      +    E                   
Sbjct: 16 PRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADH------------S 63

Query: 67 NACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
                   + + ++E ++S+   K++  V +A
Sbjct: 64 FTIKDSGEEEIKSVIEKINSKS-IKVDTFVCAA 95

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 64.7 bits (158), Expect = 7e-14
 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 2/91 (2%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAA-FGAIVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
          S     ALVTGG KGIG A+V +L   F   V   +R+ T     +Q+ +++GL    + 
Sbjct: 1  SSGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQ 60

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           D+        L + +  ++ G L++LV++A
Sbjct: 61 LDIDDLQSIRALRDFLRKEY-GGLDVLVNNA 90

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 64.6 bits (158), Expect = 8e-14
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          L G  AL+TGG  G+G A+V+   A GA V    ++   L +        G    G   D
Sbjct: 3  LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA---HGGNAVGVVGD 59

Query: 71 LKIRAQREKLMETVSSQFDGKLNILV 96
          ++    +++  E   + F GK++ L+
Sbjct: 60 VRSLQDQKRAAERCLAAF-GKIDTLI 84

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 64.1 bits (157), Expect = 9e-14
 Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 8/90 (8%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           L G T+L+TG + GIG A+   L   G+ V     NE +L       K          C
Sbjct: 11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYT---IEVC 67

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +L  + +   L+          L+ILV +A
Sbjct: 68 NLANKEECSNLISKT-----SNLDILVCNA 92

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 64.1 bits (157), Expect = 9e-14
 Identities = 17/90 (18%), Positives = 36/90 (40%), Gaps = 10/90 (11%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
             +    ++TG ++GIG  +V         V   SR+            S    +   A 
Sbjct: 25  RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKP---------SADPDIHTVAG 75

Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           D+      ++++     +F G+++ LV++A
Sbjct: 76  DISKPETADRIVREGIERF-GRIDSLVNNA 104

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 64.1 bits (157), Expect = 9e-14
 Identities = 16/90 (17%), Positives = 31/90 (34%), Gaps = 6/90 (6%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           +L     L+TG ++ +G      L   G  V    R E      +++  +  L       
Sbjct: 24  TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALY-----G 78

Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           D          ++ + +Q    L  +V +A
Sbjct: 79  DFSCETGIMAFIDLLKTQT-SSLRAVVHNA 107

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 64.2 bits (157), Expect = 1e-13
 Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 3/91 (3%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNA 68
          + G  ALVTG  +GIG A  E L   GA V     N     Q       +    +     
Sbjct: 5  VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ 64

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          CD+  + Q       V   F G+L+ILV++A
Sbjct: 65 CDVADQQQLRDTFRKVVDHF-GRLDILVNNA 94

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 63.8 bits (156), Expect = 1e-13
 Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 2/91 (2%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
            L G  ALVTG  +GIG AV   L   GA +V   + +  +  + + E K+ G       
Sbjct: 15  RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIK 74

Query: 69  CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            D++   +  KL +   + F G L+I VS++
Sbjct: 75  ADIRQVPEIVKLFDQAVAHF-GHLDIAVSNS 104

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 64.2 bits (157), Expect = 1e-13
 Identities = 22/96 (22%), Positives = 40/96 (41%), Gaps = 7/96 (7%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQE-WKSKGLQVSGN 67
            ++   A+VTG  K IG A+  +L   G  +V     +         E  K +       
Sbjct: 20  HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVC 79

Query: 68  ACDL----KIRAQREKLMETVSSQFDGKLNILVSSA 99
             DL     + A  E+++ +    F G+ ++LV++A
Sbjct: 80  QADLTNSNVLPASCEEIINSCFRAF-GRCDVLVNNA 114

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score = 63.5 bits (155), Expect = 1e-13
 Identities = 16/90 (17%), Positives = 35/90 (38%), Gaps = 2/90 (2%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
          + +  T  V G    IG  + ++ AA G  V    RN  +L   + E ++ G ++   + 
Sbjct: 4  TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSL 63

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D +   +    +    +     L + + + 
Sbjct: 64 DARNEDEVTAFLNAADA--HAPLEVTIFNV 91

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score = 63.8 bits (156), Expect = 1e-13
 Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 2/94 (2%)

Query: 7   KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ-VS 65
           +   L+G   +VTG +KGIG  +   LA  GA V   +R++  L + +      G     
Sbjct: 22  RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAH 81

Query: 66  GNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
             A  ++     E+ +        G L++L+ + 
Sbjct: 82  YIAGTMEDMTFAEQFVAQAGKLM-GGLDMLILNH 114

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 63.3 bits (155), Expect = 2e-13
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 3/87 (3%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQ-VSGNACDLK 72
           AL+TG ++GIG A+   LA  G  +     +N  +  +  +E + +G   V+    +L 
Sbjct: 3  KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLL 62

Query: 73 IRAQREKLMETVSSQFDGKLNILVSSA 99
                 L+   +    G L+ LV++A
Sbjct: 63 EAEAATALVHQAAEVL-GGLDTLVNNA 88

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 63.5 bits (155), Expect = 2e-13
 Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 17/85 (20%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR 74
            +++G   GIG A  + L A G  +      + E+                   DL   
Sbjct: 3  IIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-----------------IADLSTA 45

Query: 75 AQREKLMETVSSQFDGKLNILVSSA 99
            R++ +  V ++    ++ LV  A
Sbjct: 46 EGRKQAIADVLAKCSKGMDGLVLCA 70

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 63.3 bits (155), Expect = 2e-13
 Identities = 22/85 (25%), Positives = 32/85 (37%), Gaps = 1/85 (1%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR 74
           ALVTG  +GIG A+   L   G  V     N+        E    G        D+  R
Sbjct: 4  VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR 63

Query: 75 AQREKLMETVSSQFDGKLNILVSSA 99
           Q    +E       G  +++V++A
Sbjct: 64 DQVFAAVEQARKTL-GGFDVIVNNA 87

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 63.3 bits (155), Expect = 2e-13
 Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 1/89 (1%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          L+G  A+VTG + GIG A     A  GA V   +RN   L +   E    G + +  A D
Sbjct: 6  LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGD 65

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +   A  E L+E    +F G L+   ++A
Sbjct: 66 VGDEALHEALVELAVRRF-GGLDTAFNNA 93

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 63.4 bits (155), Expect = 2e-13
 Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 11/99 (11%)

Query: 1   MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
           MS   +K        A+VTG   G+G AV   LA  G  V    R    L +   E    
Sbjct: 23  MSKTGKK-------IAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDD 75

Query: 61  GLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            L V     D+        L      +F G++++L ++A
Sbjct: 76  ALCV---PTDVTDPDSVRALFTATVEKF-GRVDVLFNNA 110

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 62.6 bits (153), Expect = 3e-13
 Identities = 19/89 (21%), Positives = 28/89 (31%), Gaps = 4/89 (4%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          +     +VTG   G+G A+   L   G  V    R    L Q+       G  V G   D
Sbjct: 1  MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL---GNAVIGIVAD 57

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          L      +           G   +++  A
Sbjct: 58 LAHHEDVDVAFAAAVEWG-GLPELVLHCA 85

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 63.1 bits (154), Expect = 3e-13
 Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 8/97 (8%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-------LNQRIQEWKSKGL 62
           SL+G T  ++GG++GIG A+ + +AA GA V   +++          +    +E +  G 
Sbjct: 6   SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG 65

Query: 63  QVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           Q      D++        +     QF G ++I V++A
Sbjct: 66  QALPIVGDIRDGDAVAAAVAKTVEQF-GGIDICVNNA 101

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 62.6 bits (153), Expect = 3e-13
 Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 8/92 (8%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGA-------IVHTCSRNETELNQRIQEWKSKGLQVSGN 67
            L+TG  KGIG A+  E A           ++   SR   +L +   E +++G      
Sbjct: 4  ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTI 63

Query: 68 ACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            D+   A   +L   +  ++ G ++ LV++A
Sbjct: 64 TADISDMADVRRLTTHIVERY-GHIDCLVNNA 94

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 63.3 bits (154), Expect = 3e-13
 Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 8/97 (8%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-------LNQRIQEWKSKGL 62
            L G T  +TG ++GIG A+  + A  GA +   ++           +    +E ++ G 
Sbjct: 42  RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGG 101

Query: 63  QVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           +      D++   Q    +E    +F G ++ILV++A
Sbjct: 102 KALPCIVDVRDEQQISAAVEKAIKKF-GGIDILVNNA 137

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 62.2 bits (152), Expect = 4e-13
 Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 7/85 (8%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR 74
          TA+VT      G      L+  G  V     +  + +      + +    +         
Sbjct: 3  TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKD------ELEAFAETYPQLKPMSE 56

Query: 75 AQREKLMETVSSQFDGKLNILVSSA 99
           +  +L+E V+S + G++++LVS+ 
Sbjct: 57 QEPAELIEAVTSAY-GQVDVLVSND 80

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 62.1 bits (152), Expect = 5e-13
 Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 10/85 (11%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR 74
           ALVTGG++GIG A+ E L A G  V   SRN  E         ++ L       DL+ +
Sbjct: 4  KALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA--------AQSLGAVPLPTDLE-K 54

Query: 75 AQREKLMETVSSQFDGKLNILVSSA 99
             + L++       G L++LV +A
Sbjct: 55 DDPKGLVKRALEAL-GGLHVLVHAA 78

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 62.2 bits (152), Expect = 5e-13
 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 3/91 (3%)

Query: 11  LKGMTALVTGGT-KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL-QVSGNA 68
           LKG   LVT     GIG          GA V     +E  L +   +    GL +V    
Sbjct: 20  LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVV 79

Query: 69  CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           CD+      + L+     +  G+L++LV++A
Sbjct: 80  CDVTSTEAVDALITQTVEKA-GRLDVLVNNA 109

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 61.8 bits (151), Expect = 6e-13
 Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 3/89 (3%)

Query: 13 GMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
             A+VTGG +GIG  + E+LAA G    V    + E +  + I+  ++   +      D
Sbjct: 2  SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLD 61

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +  +A  +  ++  + +  G  ++LV++A
Sbjct: 62 VTDKANFDSAIDEAAEKL-GGFDVLVNNA 89

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 61.8 bits (151), Expect = 7e-13
 Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 4/86 (4%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          L+G +AL+TG  +GIG A  E     GA V     +     Q   E    G        D
Sbjct: 6  LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAE---IGPAAYAVQMD 62

Query: 71 LKIRAQREKLMETVSSQFDGKLNILV 96
          +  +   +  +        G L+ILV
Sbjct: 63 VTRQDSIDAAIAATVEHA-GGLDILV 87

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 61.9 bits (151), Expect = 7e-13
 Identities = 21/106 (19%), Positives = 44/106 (41%), Gaps = 4/106 (3%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           S+KG+ A++TGG  G+G A  E L   GA         +    + ++    G        
Sbjct: 9   SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKK---LGNNCVFAPA 65

Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSAQLPYSQRKFFVKSRGP 115
           D+      +  +     +F G++++ V+ A +  + + + +K    
Sbjct: 66  DVTSEKDVQTALALAKGKF-GRVDVAVNCAGIAVASKTYNLKKGQT 110

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 61.4 bits (150), Expect = 9e-13
 Identities = 23/90 (25%), Positives = 34/90 (37%), Gaps = 12/90 (13%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
               + LVTGG +GIG A+ + LAA G  V    R                  + G   
Sbjct: 12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS-----------GAPKGLFGVEV 60

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D+      ++    V     G + +LVS+A
Sbjct: 61 DVTDSDAVDRAFTAVEEHQ-GPVEVLVSNA 89

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score = 61.6 bits (150), Expect = 1e-12
 Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 8/98 (8%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAF---GAIVHTCSRNETELNQRIQEWKSK--GLQV 64
            L     ++TG ++G G A+  +LA     G+++   +R+E+ L Q  +E  ++   L+V
Sbjct: 3   GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKV 62

Query: 65  SGNACDLKIRAQREKLMETVSSQFD---GKLNILVSSA 99
              A DL   A  ++L+  V         +  +L+++A
Sbjct: 63  VLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNA 100

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 61.4 bits (150), Expect = 1e-12
 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 4/89 (4%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          L G T ++TGG +G+G     +  A GA V      + E     +E    G        D
Sbjct: 3  LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARE---LGDAARYQHLD 59

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          + I    ++++     +F G ++ LV++A
Sbjct: 60 VTIEEDWQRVVAYAREEF-GSVDGLVNNA 87

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 61.4 bits (150), Expect = 1e-12
 Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 4/89 (4%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          L+   A++TG   GIG      LA  GA V      ET+L          G     +  D
Sbjct: 9  LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAAS---VGRGAVHHVVD 65

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          L        L++     F G+L+I+ ++A
Sbjct: 66 LTNEVSVRALIDFTIDTF-GRLDIVDNNA 93

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 61.0 bits (149), Expect = 1e-12
 Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 2/89 (2%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          L G  A++TGGT GIG A+  +    GA V    R+     +  +   +   Q+     D
Sbjct: 4  LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQHD 62

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
                  KL +     F G ++ LV++A
Sbjct: 63 SSDEDGWTKLFDATEKAF-GPVSTLVNNA 90

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 60.6 bits (148), Expect = 2e-12
 Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 2/90 (2%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
              T +V G  + IG A     A  GA +V T +         + E +  G        
Sbjct: 6  FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKA 65

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          DL   A+ E  +   + +F G+++ LV  A
Sbjct: 66 DLTNAAEVEAAISAAADKF-GEIHGLVHVA 94

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 60.7 bits (148), Expect = 2e-12
 Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 12/89 (13%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
            +G  ALVTG   GIG AVV  L A GA V    R    +   +               D
Sbjct: 26  FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL-----------HLPGD 74

Query: 71  LKIRAQREKLMETVSSQFDGKLNILVSSA 99
           L+  A  + L   V++   G+L+I+V++A
Sbjct: 75  LREAAYADGLPGAVAAGL-GRLDIVVNNA 102

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 60.6 bits (148), Expect = 2e-12
 Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 12/90 (13%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
          S    + LVTGG +GIG A+    A  G  V    R+                      C
Sbjct: 18 SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSG-----------EPPEGFLAVKC 66

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D+    Q E+  + +     G + +L+++A
Sbjct: 67 DITDTEQVEQAYKEIEETH-GPVEVLIANA 95

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 60.8 bits (148), Expect = 2e-12
 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 1/90 (1%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
              G  A+VTGG  GIG A   E A  GA +     ++  L Q +   + +G    G  C
Sbjct: 28  GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVC 87

Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           D++   +  +L +       G ++++ S+A
Sbjct: 88  DVRHLDEMVRLADEAFRLL-GGVDVVFSNA 116

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 60.7 bits (148), Expect = 2e-12
 Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 8/97 (8%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-------LNQRIQEWKSKGL 62
          +L G T  +TG ++GIG A+    A  GA V   +++          ++       + G 
Sbjct: 3  TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG 62

Query: 63 QVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          Q     CD++   Q    +      F G ++ILV++A
Sbjct: 63 QGLALKCDIREEDQVRAAVAATVDTF-GGIDILVNNA 98

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 60.2 bits (147), Expect = 2e-12
 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 4/90 (4%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
          SL+G  AL+TG   G G  + +  A  GA V    R++    +   E     L V   A 
Sbjct: 6  SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAV---AA 62

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D+   A  +  +E   S+F GK++ILV++A
Sbjct: 63 DISKEADVDAAVEAALSKF-GKVDILVNNA 91

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score = 60.2 bits (147), Expect = 2e-12
 Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 3/91 (3%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL--QVSGNA 68
                 L+TGG  G+G A    LAA GA +     +   L              +V    
Sbjct: 11  FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 70

Query: 69  CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            D+   AQ E  +   + +F G+++   ++A
Sbjct: 71  ADVSDEAQVEAYVTATTERF-GRIDGFFNNA 100

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 60.2 bits (147), Expect = 3e-12
 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 1/90 (1%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
          +L+G  AL+TG + GIG A    LAA GA V   +R   +L     E  + G +V     
Sbjct: 4  ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLEL 63

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D+  R   +  + +      G L+ILV++A
Sbjct: 64 DVADRQGVDAAVASTVEAL-GGLDILVNNA 92

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 60.3 bits (147), Expect = 3e-12
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 4/89 (4%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
           L     +VTGG  GIG A  E  A  GA V     NE    +   E    G +  G   D
Sbjct: 25  LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANE---IGSKAFGVRVD 81

Query: 71  LKIRAQREKLMETVSSQFDGKLNILVSSA 99
           +      E ++E  ++++ G++++LV++A
Sbjct: 82  VSSAKDAESMVEKTTAKW-GRVDVLVNNA 109

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 59.9 bits (146), Expect = 3e-12
 Identities = 24/89 (26%), Positives = 34/89 (38%), Gaps = 4/89 (4%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          LK    +VTG + G+G AV   LA  GA V           +   E    G  V     D
Sbjct: 5  LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAE---LGAAVRFRNAD 61

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +   A     +     +F G ++ LV+ A
Sbjct: 62 VTNEADATAALAFAKQEF-GHVHGLVNCA 89

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score = 59.5 bits (145), Expect = 4e-12
 Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 6/96 (6%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
           LKG  ALVTG ++GIG A+ + LA  GA +       + E  + + E +S G       
Sbjct: 4  MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIG 63

Query: 69 CDLKIRAQREKLMETVSSQF-----DGKLNILVSSA 99
           +L+     E L  ++ ++        K +IL+++A
Sbjct: 64 ANLESLHGVEALYSSLDNELQNRTGSTKFDILINNA 99

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 59.9 bits (145), Expect = 4e-12
 Identities = 19/90 (21%), Positives = 34/90 (37%), Gaps = 9/90 (10%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           S+KG  A+V  GT  +G      LA  GA V  C R   +          +  +V+  A 
Sbjct: 116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-KVNVTAA 174

Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           +    A R + ++          + + ++ 
Sbjct: 175 ETADDASRAEAVKGA--------HFVFTAG 196

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 59.9 bits (146), Expect = 4e-12
 Identities = 24/99 (24%), Positives = 39/99 (39%), Gaps = 9/99 (9%)

Query: 1   MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
           M+        L G  A+VTG   GIG AV   LA  G  V     +    +    +    
Sbjct: 22  MNHPD-----LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI--- 73

Query: 61  GLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           G   +    D+    Q   +++   + F G ++ LV++A
Sbjct: 74  GCGAAACRVDVSDEQQIIAMVDACVAAF-GGVDKLVANA 111

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 59.5 bits (145), Expect = 5e-12
 Identities = 19/89 (21%), Positives = 37/89 (41%), Gaps = 1/89 (1%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          +     L+TG + GIG  +  EL   GA +   +R +  +     E +  G        D
Sbjct: 2  VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLD 61

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +  R       +     + G++++LV++A
Sbjct: 62 VTDRHSVAAFAQAAVDTW-GRIDVLVNNA 89

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 59.0 bits (144), Expect = 6e-12
 Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 7/89 (7%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
            G   LVTGG +GIG A+ +  A  GA+V  C     E  +  +       Q      D
Sbjct: 4  FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRP-EGKEVAEAIGGAFFQ-----VD 57

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          L+   +R + +E  +    G++++LV++A
Sbjct: 58 LEDERERVRFVEEAAYAL-GRVDVLVNNA 85

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 59.1 bits (144), Expect = 7e-12
 Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 4/89 (4%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          L G  ALV+GG +G+G + V  + A GA V      + E      E       V     D
Sbjct: 5  LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYV---HLD 61

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +   AQ +  ++T  + F G L++LV++A
Sbjct: 62 VTQPAQWKAAVDTAVTAF-GGLHVLVNNA 89

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 59.2 bits (144), Expect = 7e-12
 Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 5/101 (4%)

Query: 1   MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
           M+    +RW  +   ALVTG + GIG AV   L   G  V  C+R    + +   E KS 
Sbjct: 22  MARPGMERW--RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSA 79

Query: 61  GL--QVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           G    +    CDL        +   + SQ    ++I +++A
Sbjct: 80  GYPGTLIPYRCDLSNEEDILSMFSAIRSQH-SGVDICINNA 119

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 59.1 bits (144), Expect = 7e-12
 Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 11/89 (12%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
               A+VTGG+ GIG AVV+ L  +GA V + S +E         +K           D
Sbjct: 12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK----------ID 61

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +    + ++ +E  + ++ G+++ILV++A
Sbjct: 62 VTNEEEVKEAVEKTTKKY-GRIDILVNNA 89

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 5/89 (5%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
            G   +VTGG +GIG  +V      GA V  C ++E+      QE            CD
Sbjct: 7  YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQE----LPGAVFILCD 62

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +      + L+     +F G+L+ +V++A
Sbjct: 63 VTQEDDVKTLVSETIRRF-GRLDCVVNNA 90

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 58.0 bits (141), Expect = 2e-11
 Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 8/90 (8%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
          SLK   A+VTG T G+G  +V++L+    +     RN   L    +        V     
Sbjct: 2  SLKKKIAVVTGATGGMGIEIVKDLSRDHIVY-ALGRNPEHLAALAEI-----EGVEPIES 55

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D+      E  ++ + +     ++ LV +A
Sbjct: 56 DIVKEVLEEGGVDKLKNL--DHVDTLVHAA 83

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 57.9 bits (141), Expect = 2e-11
 Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 2/88 (2%)

Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE-WKSKGLQVSGNACDL 71
             A+VTG + G G A+     A G  V     +   L +  +  W +   +V     D+
Sbjct: 2  SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV 61

Query: 72 KIRAQREKLMETVSSQFDGKLNILVSSA 99
                   +     QF G +++LV++A
Sbjct: 62 ADEGDVNAAIAATMEQF-GAIDVLVNNA 88

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 58.0 bits (141), Expect = 2e-11
 Identities = 19/89 (21%), Positives = 39/89 (43%), Gaps = 12/89 (13%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          L+    +VTG + GIG A+ E     G+ V   S ++               +     CD
Sbjct: 6  LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHD-----------PGEAKYDHIECD 54

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +    Q +  ++ +  ++ G +++LV++A
Sbjct: 55 VTNPDQVKASIDHIFKEY-GSISVLVNNA 82

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 58.0 bits (141), Expect = 2e-11
 Identities = 19/96 (19%), Positives = 42/96 (43%), Gaps = 7/96 (7%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKS-KGLQVSGN 67
           + +   A++TGG + IG+++   L   G  +V     +E    + + E  + +       
Sbjct: 8   ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLC 67

Query: 68  ACDL----KIRAQREKLMETVSSQFDGKLNILVSSA 99
             DL     +    E +++     F G+ ++LV++A
Sbjct: 68  KGDLSLSSSLLDCCEDIIDCSFRAF-GRCDVLVNNA 102

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 58.1 bits (141), Expect = 2e-11
 Identities = 17/89 (19%), Positives = 31/89 (34%), Gaps = 4/89 (4%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
            +G +A+V+GG  G+G A V  L A G  V        +      E    G +    + +
Sbjct: 28  FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADE---LGNRAEFVSTN 84

Query: 71  LKIRAQREKLMETVSSQFDGKLNILVSSA 99
           +         +E  +         +V+  
Sbjct: 85  VTSEDSVLAAIEAANQLG-RLRYAVVAHG 112

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 57.1 bits (139), Expect = 3e-11
 Identities = 17/85 (20%), Positives = 30/85 (35%), Gaps = 7/85 (8%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR 74
           ALVT      G A VE L   G  V     +  +  +R +    +       A      
Sbjct: 3  IALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRF---ESENPGTIALA---E 56

Query: 75 AQREKLMETVSSQFDGKLNILVSSA 99
           + E+L++         ++ +VS+ 
Sbjct: 57 QKPERLVDATLQHG-EAIDTIVSND 80

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 57.2 bits (139), Expect = 3e-11
 Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 14/91 (15%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
          S      LVTGG+KGIG AVVE L       V      ++   + ++  K          
Sbjct: 1  SNAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLKFIK---------- 50

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           DL  +     +++ +  +     + +  +A
Sbjct: 51 ADLTKQQDITNVLDII--KN-VSFDGIFLNA 78

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 56.8 bits (138), Expect = 5e-11
 Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 2/90 (2%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
                 LVTGG++GIG AV    A  G  +    + N    +  +      G +      
Sbjct: 24  SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPG 83

Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           D+   A    +   V  QF G+L+ LV++A
Sbjct: 84  DVGNAADIAAMFSAVDRQF-GRLDGLVNNA 112

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 56.3 bits (137), Expect = 7e-11
 Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 4/89 (4%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          L+G  ALVTGG  G+G  VV+ L   GA V     NE    Q   E    G +      D
Sbjct: 4  LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHD 60

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +   A    +M  V  +  G LN+LV++A
Sbjct: 61 VSSEADWTLVMAAVQRRL-GTLNVLVNNA 88

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score = 56.7 bits (137), Expect = 7e-11
 Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 3/92 (3%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGN 67
             G TA VTGG  G+G  +V +L   G  V      +  +++ +   +++  G +V G 
Sbjct: 5  DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGV 64

Query: 68 ACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            D+  R   +   + V ++F G ++IL ++A
Sbjct: 65 QLDVASREGFKMAADEVEARF-GPVSILCNNA 95

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 56.6 bits (137), Expect = 7e-11
 Identities = 19/109 (17%), Positives = 42/109 (38%), Gaps = 20/109 (18%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKG------- 61
           +     ALVTG  K +G ++ E L A G  +     R+  E N       ++        
Sbjct: 6   APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITV 65

Query: 62  -----------LQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
                      +  +  +  + +  +  +L+    + + G+ ++LV++A
Sbjct: 66  QADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHW-GRCDVLVNNA 113

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 56.0 bits (136), Expect = 9e-11
 Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 2/88 (2%)

Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE-WKSKGLQVSGNACDL 71
             A++TG ++GIG A+   LA  G  +   +R+   L +   E  + +G++V  +  D+
Sbjct: 2  MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDV 61

Query: 72 KIRAQREKLMETVSSQFDGKLNILVSSA 99
                E+  + V  +F G ++++V++A
Sbjct: 62 SKAESVEEFSKKVLERF-GDVDVVVANA 88

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 56.0 bits (136), Expect = 1e-10
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 2/90 (2%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW-KSKGLQVSGNAC 69
           LKG   L+TGG  GIG AV    A  GA +     +E       +++ + +G++      
Sbjct: 45  LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPG 104

Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           DL      + +++    Q  G LNILV++ 
Sbjct: 105 DLSDEQHCKDIVQETVRQL-GSLNILVNNV 133

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 56.3 bits (136), Expect = 1e-10
 Identities = 19/109 (17%), Positives = 42/109 (38%), Gaps = 20/109 (18%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKG------- 61
           +     ALVTG  K +G ++ E L A G  +     R+  E N       ++        
Sbjct: 43  APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITV 102

Query: 62  -----------LQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
                      +  +  +  + +  +  +L+    + + G+ ++LV++A
Sbjct: 103 QADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHW-GRCDVLVNNA 150

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 54.9 bits (133), Expect = 2e-10
 Identities = 22/85 (25%), Positives = 30/85 (35%), Gaps = 17/85 (20%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR 74
             +TG   GIG A+ E LA  G  V    R + ++                   DL   
Sbjct: 3  VIAITGSASGIGAALKELLARAGHTVIGIDRGQADI-----------------EADLSTP 45

Query: 75 AQREKLMETVSSQFDGKLNILVSSA 99
            RE  +  V  +  G L+ LV  A
Sbjct: 46 GGRETAVAAVLDRCGGVLDGLVCCA 70

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 54.2 bits (131), Expect = 2e-10
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 23/87 (26%)

Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLK 72
           M  L+ G +  +G AV E L    A V T  R+  ++                   D+ 
Sbjct: 3  AMKILLIGASGTLGSAVKERLEK-KAEVITAGRHSGDV-----------------TVDIT 44

Query: 73 IRAQREKLMETVSSQFDGKLNILVSSA 99
               +K+ E V     GK++ +VS+ 
Sbjct: 45 NIDSIKKMYEQV-----GKVDAIVSAT 66

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 54.9 bits (133), Expect = 2e-10
 Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 8/89 (8%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          ++   A+VTGG  G+G A  + L   GA V        ++   +      G +    A D
Sbjct: 7  IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADL------GDRARFAAAD 60

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +   A     ++   +   G L I+V+ A
Sbjct: 61 VTDEAAVASALDLAETM--GTLRIVVNCA 87

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 54.8 bits (133), Expect = 2e-10
 Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 10/89 (11%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          L G   ++T   +GIG A     A  GA V     NE++L +       K   +     D
Sbjct: 4  LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE-----LEKYPGIQTRVLD 58

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +  + Q ++    V      +L++L + A
Sbjct: 59 VTKKKQIDQFANEV-----ERLDVLFNVA 82

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 54.9 bits (133), Expect = 3e-10
 Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 2/89 (2%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
           L+   A++TGG  GIG    +    +GA V      +    +      S    +S   CD
Sbjct: 14  LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISFVHCD 72

Query: 71  LKIRAQREKLMETVSSQFDGKLNILVSSA 99
           +        L++T  ++  GKL+I+  + 
Sbjct: 73  VTKDEDVRNLVDTTIAKH-GKLDIMFGNV 100

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 54.9 bits (133), Expect = 3e-10
 Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 9/94 (9%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGA---IVHTCSRNE--TELNQRIQEWKSKGLQVS 65
           LK   ALVTGG  GIG A     A  GA   I +  +  E   ++   I+E   K + + 
Sbjct: 47  LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLP 106

Query: 66  GNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           G   DL   +    L+        G L+IL   A
Sbjct: 107 G---DLSDESFARSLVHKAREAL-GGLDILALVA 136

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 54.5 bits (132), Expect = 3e-10
 Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 2/90 (2%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           S    T  +TG T G G A     A  G  +    R E  L     E  +K  +V     
Sbjct: 18  SHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKT-RVLPLTL 76

Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           D++ RA     ++ +  +F   L  L+++A
Sbjct: 77  DVRDRAAMSAAVDNLPEEF-ATLRGLINNA 105

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 53.8 bits (130), Expect = 5e-10
 Identities = 16/89 (17%), Positives = 32/89 (35%), Gaps = 9/89 (10%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          +     +V GG   +G A++E     G  V     +  +            + V GN   
Sbjct: 1  MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADS-------NILVDGNKNW 53

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
           +   ++  L +T SS    +++ +   A
Sbjct: 54 TE--QEQSILEQTASSLQGSQVDGVFCVA 80

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 53.8 bits (130), Expect = 5e-10
 Identities = 14/99 (14%), Positives = 36/99 (36%), Gaps = 7/99 (7%)

Query: 1  MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
          M+  ++          ++TG + GIG A+    +  G  +   +R      +R++     
Sbjct: 4  MTGGQQMGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRV----ERLKALNLP 59

Query: 61 GLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
                   D+  +   +  +      + G  + +V++A
Sbjct: 60 --NTLCAQVDVTDKYTFDTAITRAEKIY-GPADAIVNNA 95

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 53.3 bits (129), Expect = 1e-09
 Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 13/101 (12%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGA---IVHTCSRNET---------ELNQRIQEWK 58
            +G TAL+TGG +G+G +    LA  GA   I   C  ++          +L + +   +
Sbjct: 8   FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE 67

Query: 59  SKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
             G +      D+K RA  E  +        G ++I +++A
Sbjct: 68  KTGRRCISAKVDVKDRAALESFVAEAEDTL-GGIDIAITNA 107

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 52.5 bits (127), Expect = 1e-09
 Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 6/87 (6%)

Query: 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGNACDLK 72
          M  LVTG T G G  +       G  V    R +    +R+QE K + G  +     D++
Sbjct: 1  MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQ----ERLQELKDELGDNLYIAQLDVR 56

Query: 73 IRAQREKLMETVSSQFDGKLNILVSSA 99
           RA  E+++ ++ +++   ++ILV++A
Sbjct: 57 NRAAIEEMLASLPAEW-CNIDILVNNA 82

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 52.7 bits (127), Expect = 2e-09
 Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 8/105 (7%)

Query: 1   MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHT---CSRNE---TELNQRI 54
           MS  R+    L   T L+TG + GIG A   E              +R      EL + I
Sbjct: 21  MSQGRKAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTI 80

Query: 55  QEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            + +    +V     D+    + +  +E +  +F   ++ILV++A
Sbjct: 81  DQ-EFPNAKVHVAQLDITQAEKIKPFIENLPQEF-KDIDILVNNA 123

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 51.9 bits (125), Expect = 2e-09
 Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 9/90 (10%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
          S +    LV GG   +G   V+   A    V +    E E         S  + V     
Sbjct: 4  SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE-------ASASVIVKMTDS 56

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            +   Q    +  +    D K++ ++  A
Sbjct: 57 FTEQADQVTAEVGKLLG--DQKVDAILCVA 84

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 51.8 bits (125), Expect = 3e-09
 Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 5/90 (5%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
                 L+TG ++GIG A    L A G  V   +R+E    +R+Q   ++         
Sbjct: 2  EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDE----KRLQALAAELEGALPLPG 57

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D++      + +  +   F G+L+ LV++A
Sbjct: 58 DVREEGDWARAVAAMEEAF-GELSALVNNA 86

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 51.4 bits (124), Expect = 3e-09
 Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 12/86 (13%)

Query: 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKI 73
          M  L+TG T G+G A    L   G  +    R    L +  +E     +       DL  
Sbjct: 1  MRVLITGATGGLGGAFARALK--GHDLLLSGRRAGALAELARE-----VGARALPADLAD 53

Query: 74 RAQREKLMETVSSQFDGKLNILVSSA 99
            + + L+E       G L++LV + 
Sbjct: 54 ELEAKALLEEA-----GPLDLLVHAV 74

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 51.0 bits (123), Expect = 4e-09
 Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 7/85 (8%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR 74
            ++TG + G+G  + +   A G   +   R+E++L+       +        A DL   
Sbjct: 3  LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYR---ARDLASH 59

Query: 75 AQREKLMETVSSQFDGKLNILVSSA 99
           + E+L E    Q D   + +V SA
Sbjct: 60 QEVEQLFE----QLDSIPSTVVHSA 80

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 51.5 bits (124), Expect = 5e-09
 Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 13/101 (12%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGA------------IVHTCSRNETELNQRIQEWK 58
           L+G  A +TG  +G G      LA  GA             +     +  EL + ++  +
Sbjct: 44  LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE 103

Query: 59  SKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            +G ++     D++  A  + +++   ++F G ++ILVS+ 
Sbjct: 104 EQGRRIIARQADVRDLASLQAVVDEALAEF-GHIDILVSNV 143

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 50.4 bits (121), Expect = 1e-08
 Identities = 19/89 (21%), Positives = 39/89 (43%), Gaps = 5/89 (5%)

Query: 15  TALVTGGTKGIGYAVVEELAAF---GAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDL 71
           + L+TG  +G+G  +V+ L         + T  RN  +  + +++       +     DL
Sbjct: 23  SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQ-AKELEDLAKNHSNIHILEIDL 81

Query: 72  KIRAQREKLMETVSSQF-DGKLNILVSSA 99
           +     +KL+  +     D  LN+L ++A
Sbjct: 82  RNFDAYDKLVADIEGVTKDQGLNVLFNNA 110

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 47.9 bits (115), Expect = 8e-08
 Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 14/103 (13%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIV-------------HTCSRNETELNQRIQE 56
           SL+G  A +TG  +G G +    LAA GA +                  +  +L++  + 
Sbjct: 12  SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARL 71

Query: 57  WKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            + +G +      D++  A   +L+     QF G+L+++V++A
Sbjct: 72  VEDQGRKALTRVLDVRDDAALRELVADGMEQF-GRLDVVVANA 113

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 47.6 bits (114), Expect = 1e-07
 Identities = 18/101 (17%), Positives = 46/101 (45%), Gaps = 13/101 (12%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIV------------HTCSRNETELNQRIQEWK 58
           ++G  A +TG  +G G +    LA  GA +                    +L + +++ +
Sbjct: 26  VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE 85

Query: 59  SKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           + G ++  +  D++     +  ++   +Q  G+L+I++++A
Sbjct: 86  ALGRRIIASQVDVRDFDAMQAAVDDGVTQL-GRLDIVLANA 125

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 47.3 bits (113), Expect = 1e-07
 Identities = 16/88 (18%), Positives = 38/88 (43%), Gaps = 6/88 (6%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGAI--VHTCSRNETELNQRIQEWKSKGLQVSGNACDLK 72
          + +VTG  +GIG  +V++L     I  +   +R+  +  + ++  K   + V      + 
Sbjct: 5  SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE-LKSIKDSRVHVL--PLTVT 61

Query: 73 IRAQREKLMETVSSQFDG-KLNILVSSA 99
               +  +  V        L++L+++A
Sbjct: 62 CDKSLDTFVSKVGEIVGSDGLSLLINNA 89

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 47.2 bits (113), Expect = 1e-07
 Identities = 19/85 (22%), Positives = 29/85 (34%), Gaps = 14/85 (16%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR 74
          +ALVTGG  G+G A    L A G  V                   +G  +     D+   
Sbjct: 4  SALVTGGASGLGRAAALALKARGYRVVVLDLRR------------EGEDLIYVEGDVTRE 51

Query: 75 AQREKLMETVSSQFDGKLNILVSSA 99
              + +     +    L  +VS+A
Sbjct: 52 EDVRRAVARAQEE--APLFAVVSAA 74

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 46.8 bits (112), Expect = 2e-07
 Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 13/101 (12%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIV------------HTCSRNETELNQRIQEWK 58
           L G  A +TG  +G G A    LAA GA +                    EL   ++  +
Sbjct: 11  LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70

Query: 59  SKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
             G ++     D++ R      ++    +  G+L+I+V++A
Sbjct: 71  DIGSRIVARQADVRDRESLSAALQAGLDEL-GRLDIVVANA 110

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 46.8 bits (112), Expect = 2e-07
 Identities = 23/101 (22%), Positives = 44/101 (43%), Gaps = 13/101 (12%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIV------------HTCSRNETELNQRIQEWK 58
           ++    LVTGG +G G +   +LA  GA +                    +L +   E +
Sbjct: 8   VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE 67

Query: 59  SKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
             G +      D++ RA   + +    ++F GKL+++V++A
Sbjct: 68  KTGRKAYTAEVDVRDRAAVSRELANAVAEF-GKLDVVVANA 107

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 46.0 bits (110), Expect = 3e-07
 Identities = 21/102 (20%), Positives = 46/102 (45%), Gaps = 14/102 (13%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGA-------------IVHTCSRNETELNQRIQEW 57
           L+G  A +TG  +G G A    +AA GA              V     +  +L++ ++  
Sbjct: 9   LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV 68

Query: 58  KSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           ++   ++     D +   +  K+++   +   G+L+I+V++A
Sbjct: 69  EAANRRIVAAVVDTRDFDRLRKVVDDGVAAL-GRLDIIVANA 109

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 44.9 bits (107), Expect = 9e-07
 Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 3/62 (4%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
          S    T ++TG   G+G     ELA  GA V    R+  +     +       QV     
Sbjct: 13 SFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAG---QVEVREL 69

Query: 70 DL 71
          DL
Sbjct: 70 DL 71

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 44.7 bits (106), Expect = 1e-06
 Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 11/100 (11%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIV----------HTCSRNETELNQRIQEWKS 59
            + G   +VTG   GIG A     AA GA V           + +   +     + E  +
Sbjct: 24  VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITA 83

Query: 60  KGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            G +   +  ++    Q   L++T    F G L++LV++A
Sbjct: 84  AGGEAVADGSNVADWDQAAGLIQTAVETF-GGLDVLVNNA 122

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score = 44.1 bits (104), Expect = 3e-06
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 6/58 (10%)

Query: 10  SLKGMTALVTGGTKG-IGYAVVEELAAFGA-IVHTCSR---NETELNQRI-QEWKSKG 61
           + K    L+TG  KG IG  V++ L   GA +V T SR     T+  Q I  ++ +KG
Sbjct: 473 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKG 530

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 43.5 bits (103), Expect = 3e-06
 Identities = 21/108 (19%), Positives = 40/108 (37%), Gaps = 18/108 (16%)

Query: 1  MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIV---------HTCSRNETELN 51
          MS         K    ++TG   G+G     E A  GA V         +    N    +
Sbjct: 1  MSPVD-----FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAAD 55

Query: 52 QRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            + E    G     +  ++      +K++ET    F G +++++++A
Sbjct: 56 VVVDEIVKNGGVAVADYNNV---LDGDKIVETAVKNF-GTVHVIINNA 99

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 43.7 bits (103), Expect = 3e-06
 Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 6/78 (7%)

Query: 15   TALVTGGTKGIGYAVVEELAAFGA--IVHTCSR---NETELNQRIQEWKSKGLQVSGNAC 69
            + ++TGG  G G  + + L   GA  +V T SR         ++++EW+ +G+QV  +  
Sbjct: 1886 SYVITGGLGGFGLQLAQWLRLRGAQKLVLT-SRSGIRTGYQARQVREWRRQGVQVLVSTS 1944

Query: 70   DLKIRAQREKLMETVSSQ 87
            +         L+   +  
Sbjct: 1945 NASSLDGARSLITEATQL 1962

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 43.2 bits (102), Expect = 4e-06
 Identities = 17/90 (18%), Positives = 39/90 (43%), Gaps = 6/90 (6%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE-----WKSKGLQVSGNAC 69
            L+TG + G G    E LA  G  V+   R+    N    E      +   + +     
Sbjct: 7  IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLEL 66

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D++ +   ++ ++ +  +  G++++L+ +A
Sbjct: 67 DVQSQVSVDRAIDQIIGED-GRIDVLIHNA 95

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 43.0 bits (102), Expect = 5e-06
 Identities = 20/105 (19%), Positives = 41/105 (39%), Gaps = 17/105 (16%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIV----------------HTCSRNETELNQRI 54
           ++G  A VTG  +G G +    LA  GA +                   +    +L +  
Sbjct: 9   VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETA 68

Query: 55  QEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
              K    ++     D++     +  +++   Q  G+L+I+V++A
Sbjct: 69  DLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQL-GRLDIIVANA 112

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 42.3 bits (100), Expect = 7e-06
 Identities = 19/85 (22%), Positives = 41/85 (48%), Gaps = 4/85 (4%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR 74
            LVTG + G G A+ E   A G  V   +R    L+  +  +  +   +   + D+   
Sbjct: 7  VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAI---SLDVTDG 63

Query: 75 AQREKLMETVSSQFDGKLNILVSSA 99
           + + +   V +++ G++++LV++A
Sbjct: 64 ERIDVVAADVLARY-GRVDVLVNNA 87

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 41.7 bits (98), Expect = 1e-05
 Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 13/99 (13%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIV---------HTCSRNETELNQRIQEWKSK 60
              G  A+VTG   G+G       A  GA V              ++   +  + E +  
Sbjct: 16  RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA 75

Query: 61  GLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           G +   +   +       K++ET    F G+++ILV++A
Sbjct: 76  GGEAVADYNSV---IDGAKVIETAIKAF-GRVDILVNNA 110

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* Length = 496

 Score = 40.1 bits (94), Expect = 6e-05
 Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 7/82 (8%)

Query: 8   RWSLKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSR---NETELNQRIQEWKSKGL 62
           R  + G + LVTGGT GIG  V   LA  GA  +V T SR   +     +   E +  G+
Sbjct: 235 RPPVHG-SVLVTGGTGGIGGRVARRLAEQGAAHLVLT-SRRGADAPGAAELRAELEQLGV 292

Query: 63  QVSGNACDLKIRAQREKLMETV 84
           +V+  ACD   R     L+  +
Sbjct: 293 RVTIAACDAADREALAALLAEL 314

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 39.6 bits (93), Expect = 7e-05
 Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 13/99 (13%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIV---------HTCSRNETELNQRIQEWKSK 60
              G   LVTG   G+G A     A  GA+V             +  +  ++ ++E + +
Sbjct: 6   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 65

Query: 61  GLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           G +   N   +      EKL++T    F G+++++V++A
Sbjct: 66  GGKAVANYDSV---EAGEKLVKTALDTF-GRIDVVVNNA 100

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} Length = 525

 Score = 39.0 bits (91), Expect = 1e-04
 Identities = 19/92 (20%), Positives = 30/92 (32%), Gaps = 16/92 (17%)

Query: 8   RWSLKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQR------------ 53
            W   G T LVTG  +         LA  GA  ++   + + +E  +             
Sbjct: 247 WWQADG-TVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAG 305

Query: 54  -IQEWKSKGLQVSGNACDLKIRAQREKLMETV 84
            + E    G   +   CDL       +L+  V
Sbjct: 306 LVAELADLGATATVVTCDLTDAEAAARLLAGV 337

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* Length = 486

 Score = 38.9 bits (91), Expect = 1e-04
 Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 7/82 (8%)

Query: 8   RWSLKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETE---LNQRIQEWKSKGL 62
            W   G T LVTGGT G+G  +   LA  GA  ++   SR+  +     + + E ++ G 
Sbjct: 222 EWKPTG-TVLVTGGTGGVGGQIARWLARRGAPHLLLV-SRSGPDADGAGELVAELEALGA 279

Query: 63  QVSGNACDLKIRAQREKLMETV 84
           + +  ACD+  R    +L+  +
Sbjct: 280 RTTVAACDVTDRESVRELLGGI 301

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 38.2 bits (89), Expect = 2e-04
 Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 7/78 (8%)

Query: 15  TALVTGGTKGIGYAVVEELAAF-GA--IVHTCSR---NETELNQRIQEWKSKGLQVSGNA 68
           T LVTGGT  +G  V   L    G   +V   SR     +   + + +  + G +VS  A
Sbjct: 532 TVLVTGGTGALGAEVARHLVIERGVRNLVLV-SRRGPAASGAAELVAQLTAYGAEVSLQA 590

Query: 69  CDLKIRAQREKLMETVSS 86
           CD+  R    K++ ++  
Sbjct: 591 CDVADRETLAKVLASIPD 608

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 37.6 bits (87), Expect = 3e-04
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 7/62 (11%)

Query: 10 SLKGMTA-------LVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL 62
          S  GM         L+ GGT  IG  +V+     G   +  +R  +     + E++S G 
Sbjct: 1  SGHGMEENGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGA 60

Query: 63 QV 64
           +
Sbjct: 61 II 62

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 37.3 bits (87), Expect = 4e-04
 Identities = 11/46 (23%), Positives = 16/46 (34%)

Query: 2  SDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE 47
               +    +GM  LV G    +   ++ EL   G       RNE
Sbjct: 10 HSSGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 37.2 bits (86), Expect = 5e-04
 Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 5/53 (9%)

Query: 17 LVTGGTKGIGYAVVEELAAFGAIVHTCSRNET-----ELNQRIQEWKSKGLQV 64
          L+ G T  IG  V +     G       R  T     E  Q ++ +K+ G  +
Sbjct: 8  LLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANI 60

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 37.0 bits (86), Expect = 5e-04
 Identities = 18/91 (19%), Positives = 36/91 (39%), Gaps = 9/91 (9%)

Query: 15 TALVTGGTKGIGYAVVEELAAF---GAIVHTCSRNE---TELNQRIQEWKSKGLQVSGNA 68
            L+TG + GIG  +   LA+       V+   R+      L +  +        +    
Sbjct: 4  VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           D++         E V+   +G++++LV +A
Sbjct: 64 LDVRDSKSVAAARERVT---EGRVDVLVCNA 91

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} Length = 511

 Score = 36.7 bits (85), Expect = 7e-04
 Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 7/74 (9%)

Query: 8   RWSLKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSR---NETELNQRIQEWKSKGL 62
            W   G   L+TGG   IG  +   LAA GA  +V T SR         +  +E +  G 
Sbjct: 255 SWQPSGT-VLITGGMGAIGRRLARRLAAEGAERLVLT-SRRGPEAPGAAELAEELRGHGC 312

Query: 63  QVSGNACDLKIRAQ 76
           +V   ACD+  R  
Sbjct: 313 EVVHAACDVAERDA 326

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 36.2 bits (84), Expect = 8e-04
 Identities = 8/39 (20%), Positives = 17/39 (43%)

Query: 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETEL 50
          K    ++ G +  +G A++ E    G  V    R+  ++
Sbjct: 3  KVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKI 41

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 36.1 bits (84), Expect = 8e-04
 Identities = 9/58 (15%), Positives = 16/58 (27%), Gaps = 5/58 (8%)

Query: 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ-VSGNACD 70
              + G T   G   + +    G  V    R+      R+     +    V G+   
Sbjct: 4  KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS----SRLPSEGPRPAHVVVGDVLQ 57

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	120
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.96
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.96
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.94
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.93
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.92
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.92
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.92
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.92
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.91
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.91
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.91
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.91
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.91
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.91
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.91
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.91
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.91
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.91
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.91
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.91
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.91
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.91
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.91
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.91
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.91
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.91
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.91
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.91
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.91
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.91
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.91
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.91
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.91
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.9
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.9
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.9
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.9
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.9
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.9
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.9
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.9
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.9
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.9
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.9
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.9
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.9
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.9
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.9
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.9
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.9
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.9
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.9
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.9
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.9
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.9
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.9
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.9
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.9
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.9
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.9
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.9
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.9
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.9
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.9
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.9
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.9
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.9
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.9
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.9
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.9
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.9
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.9
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.9
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.89
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.89
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.89
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.89
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.89
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.89
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.89
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.89
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.89
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.89
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.89
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.89
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.89
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.89
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.89
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.89
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.89
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.89
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.89
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.89
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.89
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.89
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.89
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.88
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.88
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.88
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.88
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.88
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.88
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.88
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.88
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.88
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.88
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.88
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.88
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.88
1spx_A	278	Short-chain reductase family member (5L265); paral	99.88
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.88
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.88
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.88
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.87
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.87
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.87
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.87
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.87
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.87
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.87
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.87
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.87
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.87
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.87
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.87
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.87
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.87
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.87
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.87
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.87
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.87
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.87
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.87
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.87
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.87
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.87
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.87
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.87
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.87
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.87
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.87
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.86
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.86
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.86
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.86
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.86
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.86
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.86
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.86
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.86
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.86
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.86
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.86
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.86
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.86
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.86
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.86
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.86
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.86
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.86
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.85
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.85
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.85
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.85
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.85
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.85
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.85
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.85
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.85
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.85
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.85
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.85
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.84
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.84
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.84
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.84
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.83
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.83
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.83
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.83
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.82
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.82
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.82
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.82
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.81
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.81
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.81
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.8
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.8
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.79
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.79
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.79
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.79
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.78
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.78
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.77
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.77
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.77
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.77
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.77
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.77
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.77
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.76
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.75
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.75
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.75
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.75
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.74
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.74
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.74
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.74
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.74
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.74
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.73
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.73
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.71
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.71
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.71
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.7
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.7
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.7
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.68
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.68
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.67
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.67
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.66
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.66
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.66
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.66
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.63
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.63
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.62
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.62
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.6
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.6
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.59
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.59
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.58
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.57
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.57
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.57
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.57
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.56
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.56
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.56
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.56
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.56
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.56
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.55
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.54
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.54
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.54
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.54
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.53
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.52
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.52
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.51
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.5
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.49
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.49
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.49
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.49
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.49
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.49
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.48
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.48
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.47
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.46
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.46
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.46
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.46
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.46
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.45
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.45
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.44
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.42
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.41
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.41
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.4
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.4
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.39
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.39
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.37
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.36
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.36
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.34
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.34
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.33
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.33
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.33
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.33
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.32
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.31
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.31
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.31
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.3
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.29
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.29
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.28
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.28
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.28
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.28
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.28
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.27
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.27
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.25
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.25
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.23
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.22
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.21
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	99.19
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.18
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.16
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.11
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	99.08
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	99.06
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.02
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.02
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.0
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.97
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	98.97
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.94
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.93
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.91
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.85
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.76
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.73
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.72
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.7
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.7
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.69
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.68
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.68
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.67
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	98.66
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.66
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.64
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.63
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.61
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.6
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.57
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.54
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	98.52
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.5
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.46
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.45
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.44
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.43
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	98.42
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.41
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.38
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.37
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	98.36
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.34
3gms_A	340	Putative NADPH:quinone reductase; structural genom	98.31
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.3
4eye_A	342	Probable oxidoreductase; structural genomics, niai	98.28
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.27
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.25
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	98.24
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	98.23
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.18
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.1
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	98.1
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.1
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.1
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	98.09
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.09
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.09
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.08
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.08
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	98.06
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	98.05
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.03
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	98.03
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.97
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.93
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.92
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.91
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.89
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.89
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.87
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.85
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.84
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.82
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.82
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.79
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.76
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.74
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.73
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.72
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.71
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.7
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.68
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.64
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.63
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.62
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.59
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.56
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.55
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.55
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.54
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.53
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.53
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	97.52
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.5
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.49
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.48
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	97.48
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	97.47
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.47
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	97.47
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.46
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.45
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.45
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.44
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	97.43
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.43
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	97.42
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	97.41
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.38
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	97.37
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.37
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.36
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.36
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	97.35
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	97.34
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.32
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.29
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	97.28
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	97.27
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	97.27
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	97.24
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	97.2
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.2
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	97.19
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.19
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.18
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	97.18
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.18
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	97.16
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.16
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.14
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	97.14
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.12
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	97.11
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	97.1
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	97.08
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	97.07
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.03
1lnq_A	336	MTHK channels, potassium channel related protein;	97.0
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.97
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.97
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.95
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.93
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.91
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.91
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.88
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.88
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	96.85
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.83
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.75
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.75
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.74
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.73
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.72
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	96.71
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	96.71
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	96.7
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.69
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.68
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.67
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.67
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.67
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.67
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.67
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.66
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	96.66
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	96.64
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.62
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.62
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.6
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	96.59
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.58
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.57
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	96.56
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	96.53
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.51
2l82_A	162	Designed protein OR32; structural genomics, northe	96.5
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	96.5
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.49
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	96.49
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	96.46
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.41
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.39
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.39
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	96.37
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.35
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	96.32
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	96.31

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.96  E-value=5e-29  Score=171.61  Aligned_cols=112  Identities=28%  Similarity=0.354  Sum_probs=105.1

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +++++||+++||||++|||++++++|+++|++|++++|+++.+++..+++...+.++..+.+|++|+++++++++++.++
T Consensus         4 ~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (255)
T 4g81_D            4 LFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAE   83 (255)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            46799999999999999999999999999999999999999999999999988999999999999999999999999999


Q ss_pred             cCCcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                      + |++|+||||||+..           |++.+++|+.|+|+++|
T Consensus        84 ~-G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~  126 (255)
T 4g81_D           84 G-IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSR  126 (255)
T ss_dssp             T-CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             C-CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            9 99999999999977           36778999999998764

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.96  E-value=9.9e-29  Score=170.03  Aligned_cols=111  Identities=26%  Similarity=0.355  Sum_probs=103.9

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++++|+++||||++|||+++|++|+++|++|++++|+++.+++..++++..+.++..+.+|++|+++++++++++.+++
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   82 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY   82 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999999999999999999889999999999999999999999999999


Q ss_pred             CCcccEEEecCCCCC------------ccceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPY------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~------------~~~~~~~n~~g~~~~~~  120 (120)
                       |++|+||||||+..            |++.+++|+.|+|+++|
T Consensus        83 -G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~  125 (254)
T 4fn4_A           83 -SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSR  125 (254)
T ss_dssp             -SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             -CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence             99999999999754            36779999999998764

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.94  E-value=7.3e-27  Score=162.18  Aligned_cols=107  Identities=27%  Similarity=0.349  Sum_probs=97.8

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++   +.++..+.+|++|+++++++++++.+++ 
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-  101 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAVGIQADSANLAELDRLYEKVKAEA-  101 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeEEEEecCCCHHHHHHHHHHHHHHc-
Confidence            389999999999999999999999999999999999998888777665   6778899999999999999999999999 


Q ss_pred             CcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                      |+||+||||||+..           |++.+++|+.|+|+++|
T Consensus       102 G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~  143 (273)
T 4fgs_A          102 GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQ  143 (273)
T ss_dssp             SCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHH
Confidence            99999999999866           36779999999998764

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.93  E-value=2.9e-26  Score=158.15  Aligned_cols=110  Identities=23%  Similarity=0.234  Sum_probs=97.4

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+..+ ..+++.+.+.++.++.+|++++++++++++++.++|
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~   81 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF   81 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh
Confidence            5689999999999999999999999999999999999876543 445566668889999999999999999999999999


Q ss_pred             CCcccEEEecCCCCC----------ccceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPY----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~----------~~~~~~~n~~g~~~~~~  120 (120)
                       |++|+||||||+..          |.+.+++|+.|+|+++|
T Consensus        82 -G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~  122 (258)
T 4gkb_A           82 -GRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAH  122 (258)
T ss_dssp             -SCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHH
Confidence             99999999999865          46778999999998764

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.92  E-value=4e-25  Score=152.22  Aligned_cols=113  Identities=27%  Similarity=0.442  Sum_probs=101.8

Q ss_pred             ccccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcC-CeEEEEeccCCCHHHHHHHHHHHH
Q 033396            7 KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-LQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus         7 ~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      +++++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+ .++.++.+|++|+++++++++++.
T Consensus         4 ~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (262)
T 3pk0_A            4 SMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAV   83 (262)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999999999888888887765 789999999999999999999999


Q ss_pred             hhcCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           86 SQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      +++ |++|+||||||+...           ++.+++|+.|+++++|
T Consensus        84 ~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  128 (262)
T 3pk0_A           84 EEF-GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQ  128 (262)
T ss_dssp             HHH-SCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHh-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            999 899999999998652           4568999999987753

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.92  E-value=3.5e-25  Score=151.83  Aligned_cols=103  Identities=18%  Similarity=0.185  Sum_probs=91.7

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      .|++|||||++|||+++|++|+++|++|++++++++.+++..    +.+.++..+.+|++|+++++++++++.+++ |++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~----~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~-g~i   76 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFA----KERPNLFYFHGDVADPLTLKKFVEYAMEKL-QRI   76 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----TTCTTEEEEECCTTSHHHHHHHHHHHHHHH-SCC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HhcCCEEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            389999999999999999999999999999999987665443    346678999999999999999999999999 999


Q ss_pred             cEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           93 NILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        93 d~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                      |+||||||+..           |++.+++|+.|+|+++|
T Consensus        77 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~  115 (247)
T 3ged_A           77 DVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSR  115 (247)
T ss_dssp             CEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999876           36779999999998764

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.92  E-value=5.4e-25  Score=151.86  Aligned_cols=112  Identities=29%  Similarity=0.371  Sum_probs=100.8

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh-cCCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KGLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      ++.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.. .+.++.++.+|++|+++++++++++.+
T Consensus        15 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   94 (266)
T 4egf_A           15 VLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAE   94 (266)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999999888888888876 578899999999999999999999999


Q ss_pred             hcCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           87 QFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      ++ |++|+||||||+...           ++.+++|+.|+++++|
T Consensus        95 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  138 (266)
T 4egf_A           95 AF-GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLAS  138 (266)
T ss_dssp             HH-TSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             Hc-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            99 899999999998763           4568899999887753

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.92  E-value=1.2e-24  Score=149.96  Aligned_cols=111  Identities=15%  Similarity=0.205  Sum_probs=100.9

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ..+++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+++
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (264)
T 3ucx_A            7 GLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY   86 (264)
T ss_dssp             CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            34789999999999999999999999999999999999999988888888888899999999999999999999999999


Q ss_pred             CCcccEEEecCCCCC------------ccceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPY------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~------------~~~~~~~n~~g~~~~~~  120 (120)
                       |++|+||||||+..            |.+.+++|+.|+++++|
T Consensus        87 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  129 (264)
T 3ucx_A           87 -GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQ  129 (264)
T ss_dssp             -SCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             -CCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHH
Confidence             89999999998853            24668999999987753

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.91  E-value=6.2e-25  Score=152.03  Aligned_cols=111  Identities=26%  Similarity=0.358  Sum_probs=100.7

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ..+++|+++||||++|||++++++|+++|++|++++|+...+++..+++...+.++..+.+|++|+++++++++++.+.+
T Consensus        24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (270)
T 3ftp_A           24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF  103 (270)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            35889999999999999999999999999999999999988888888888778888999999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                       |++|+||||||+...           ++.+++|+.|+++++|
T Consensus       104 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  145 (270)
T 3ftp_A          104 -GALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSR  145 (270)
T ss_dssp             -SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence             899999999998653           4568999999988753

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.91  E-value=7.8e-25  Score=151.94  Aligned_cols=112  Identities=25%  Similarity=0.345  Sum_probs=101.5

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      ++++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.++
T Consensus        27 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  106 (276)
T 3r1i_A           27 LFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGE  106 (276)
T ss_dssp             GGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999998888888888888888999999999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      + |++|+||||||+...           ++.+++|+.|+++++|
T Consensus       107 ~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  149 (276)
T 3r1i_A          107 L-GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQ  149 (276)
T ss_dssp             H-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence            9 899999999999763           4557899999887753

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.91  E-value=8.5e-25  Score=150.14  Aligned_cols=113  Identities=23%  Similarity=0.323  Sum_probs=102.5

Q ss_pred             ccccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396            7 KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus         7 ~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      +++++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   85 (256)
T 3gaf_A            6 SPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALD   85 (256)
T ss_dssp             CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            34668999999999999999999999999999999999999888888888888888999999999999999999999999


Q ss_pred             hcCCcccEEEecCCCCCc----------cceeeeeccceecccC
Q 033396           87 QFDGKLNILVSSAQLPYS----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~~----------~~~~~~n~~g~~~~~~  120 (120)
                      ++ |++|+||||||+...          ++.+++|+.|+++++|
T Consensus        86 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  128 (256)
T 3gaf_A           86 QF-GKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQ  128 (256)
T ss_dssp             HH-SCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             Hc-CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHH
Confidence            99 899999999998653          4568899999988753

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.91  E-value=1.2e-24  Score=149.98  Aligned_cols=118  Identities=20%  Similarity=0.275  Sum_probs=97.1

Q ss_pred             CcccccccccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCHHHHH
Q 033396            1 MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIRAQRE   78 (120)
Q Consensus         1 ~~~~~~~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~   78 (120)
                      |+.++.+.+.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|+++++
T Consensus         1 m~~~~~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   80 (267)
T 1iy8_A            1 MTATSSPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVE   80 (267)
T ss_dssp             ---------CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHH
T ss_pred             CCCCCCCCccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHH
Confidence            566666677789999999999999999999999999999999999988887777777654  678899999999999999


Q ss_pred             HHHHHHHhhcCCcccEEEecCCCCCc------------cceeeeeccceeccc
Q 033396           79 KLMETVSSQFDGKLNILVSSAQLPYS------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        79 ~~~~~~~~~~~g~id~li~~ag~~~~------------~~~~~~n~~g~~~~~  119 (120)
                      ++++++.+++ |++|+||||||+...            ++.+++|+.|+++++
T Consensus        81 ~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~  132 (267)
T 1iy8_A           81 AYVTATTERF-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGL  132 (267)
T ss_dssp             HHHHHHHHHH-SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHH
T ss_pred             HHHHHHHHHc-CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHH
Confidence            9999999999 899999999998642            356789999988764

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.91  E-value=1e-24  Score=151.82  Aligned_cols=112  Identities=28%  Similarity=0.335  Sum_probs=99.3

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      ++++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (283)
T 3v8b_A           23 MMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLK  102 (283)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999999888888888887889999999999999999999999999


Q ss_pred             cCCcccEEEecCCCCC------------ccceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPY------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~------------~~~~~~~n~~g~~~~~~  120 (120)
                      + |++|+||||||+..            |++.+++|+.|+++++|
T Consensus       103 ~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  146 (283)
T 3v8b_A          103 F-GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLH  146 (283)
T ss_dssp             H-SCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             h-CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            9 89999999999853            24668999999987753

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.91  E-value=1.1e-24  Score=150.56  Aligned_cols=109  Identities=21%  Similarity=0.314  Sum_probs=99.9

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      +.+|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.+ |
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g   80 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTW-G   80 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            568999999999999999999999999999999999999988888888888899999999999999999999999999 8


Q ss_pred             cccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           91 KLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        91 ~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      ++|+||||||+...           .+.+++|+.|+++++|
T Consensus        81 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  121 (264)
T 3tfo_A           81 RIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIG  121 (264)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999998753           4668999999887653

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.91  E-value=1.3e-24  Score=150.75  Aligned_cols=113  Identities=24%  Similarity=0.354  Sum_probs=99.5

Q ss_pred             ccccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeC-------------ChHHHHHHHHHHHhcCCeEEEEeccCCC
Q 033396            7 KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-------------NETELNQRIQEWKSKGLQVSGNACDLKI   73 (120)
Q Consensus         7 ~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~   73 (120)
                      .+.++++|+++||||++|||++++++|+++|++|++++|             +...+++..+++...+.++.++.+|++|
T Consensus         9 ~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   88 (280)
T 3pgx_A            9 QAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRD   88 (280)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred             cccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCC
Confidence            345689999999999999999999999999999999998             5667777778887778899999999999


Q ss_pred             HHHHHHHHHHHHhhcCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           74 RAQREKLMETVSSQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        74 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      +++++++++++.+++ |++|+||||||+...           ++.+++|+.|+++++|
T Consensus        89 ~~~v~~~~~~~~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  145 (280)
T 3pgx_A           89 DAALRELVADGMEQF-GRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLR  145 (280)
T ss_dssp             HHHHHHHHHHHHHHH-CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence            999999999999999 899999999999763           4567899999987753

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.91  E-value=1.1e-24  Score=149.74  Aligned_cols=111  Identities=14%  Similarity=0.078  Sum_probs=95.7

Q ss_pred             cccccCcEEEEecCCC--chHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc-CCeEEEEeccCCCHHHHHHHHHHH
Q 033396            8 RWSLKGMTALVTGGTK--GIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGNACDLKIRAQREKLMETV   84 (120)
Q Consensus         8 ~~~~~~~~~litGa~~--~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   84 (120)
                      |++++||+++||||++  |||+++|++|+++|++|++++|++..++++.+.+++. +.++..+.+|++++++++++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQI   80 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHH
Confidence            4678999999999875  9999999999999999999999998888888888775 458899999999999999999999


Q ss_pred             HhhcCCcccEEEecCCCCCc---------------cceeeeeccceeccc
Q 033396           85 SSQFDGKLNILVSSAQLPYS---------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        85 ~~~~~g~id~li~~ag~~~~---------------~~~~~~n~~g~~~~~  119 (120)
                      .+++ |++|+||||||+...               ...+++|+.+++.++
T Consensus        81 ~~~~-G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~  129 (256)
T 4fs3_A           81 GKDV-GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVA  129 (256)
T ss_dssp             HHHH-CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             HHHh-CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence            9999 999999999998642               234567777766543

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.91  E-value=8.7e-25  Score=151.36  Aligned_cols=111  Identities=26%  Similarity=0.364  Sum_probs=101.6

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+++
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG  101 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            56899999999999999999999999999999999999999888888888888899999999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                       |++|+||||||+...           ++.+++|+.|+++++|
T Consensus       102 -g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  143 (271)
T 4ibo_A          102 -IDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGR  143 (271)
T ss_dssp             -CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHH
Confidence             899999999998652           4568999999988753

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.91  E-value=1.4e-24  Score=150.67  Aligned_cols=111  Identities=27%  Similarity=0.417  Sum_probs=97.7

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus        20 ~m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (279)
T 3sju_A           20 HMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF   99 (279)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999999998888888888888899999999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                       |++|+||||||+...           ++.+++|+.|+++++|
T Consensus       100 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  141 (279)
T 3sju_A          100 -GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTR  141 (279)
T ss_dssp             -CSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             -CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence             899999999998763           4567899999987753

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.91  E-value=9.7e-25  Score=152.73  Aligned_cols=112  Identities=28%  Similarity=0.359  Sum_probs=101.0

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcC-CeEEEEeccCCCHHHHHHHHHHHHh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-LQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      ++++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+ .++.++.+|++|+++++++++++.+
T Consensus        36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  115 (293)
T 3rih_A           36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVD  115 (293)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence            456899999999999999999999999999999999999988888888887765 7899999999999999999999999


Q ss_pred             hcCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           87 QFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      ++ |++|+||||||+...           .+.+++|+.|+++++|
T Consensus       116 ~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  159 (293)
T 3rih_A          116 AF-GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQ  159 (293)
T ss_dssp             HH-SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             Hc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            99 899999999998653           4568999999987653

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.91  E-value=1.1e-24  Score=149.56  Aligned_cols=110  Identities=21%  Similarity=0.353  Sum_probs=99.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+++ 
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   81 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF-   81 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            4689999999999999999999999999999999999999888888887778889999999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      |++|+||||||+...           ++.+++|+.|+++++|
T Consensus        82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~  123 (257)
T 3imf_A           82 GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQ  123 (257)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            899999999997652           4668899999887653

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.91  E-value=1.7e-24  Score=150.18  Aligned_cols=113  Identities=27%  Similarity=0.337  Sum_probs=99.0

Q ss_pred             ccccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCC---eEEEEeccCCCHHHHHHHHHH
Q 033396            7 KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL---QVSGNACDLKIRAQREKLMET   83 (120)
Q Consensus         7 ~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~   83 (120)
                      +.+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.   ++.++.+|++|++++++++++
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   84 (281)
T 3svt_A            5 MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDA   84 (281)
T ss_dssp             ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHH
Confidence            44568999999999999999999999999999999999999888888888877654   899999999999999999999


Q ss_pred             HHhhcCCcccEEEecCCCCC------------ccceeeeeccceecccC
Q 033396           84 VSSQFDGKLNILVSSAQLPY------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        84 ~~~~~~g~id~li~~ag~~~------------~~~~~~~n~~g~~~~~~  120 (120)
                      +.+.+ |++|+||||||+..            |.+.+++|+.|+++++|
T Consensus        85 ~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  132 (281)
T 3svt_A           85 VTAWH-GRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLK  132 (281)
T ss_dssp             HHHHH-SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHc-CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            99999 89999999999832            24678899999988753

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.91  E-value=1.9e-24  Score=149.71  Aligned_cols=113  Identities=19%  Similarity=0.308  Sum_probs=99.0

Q ss_pred             ccccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeC-------------ChHHHHHHHHHHHhcCCeEEEEeccCCC
Q 033396            7 KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-------------NETELNQRIQEWKSKGLQVSGNACDLKI   73 (120)
Q Consensus         7 ~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~   73 (120)
                      ++..+++|+++||||++|||++++++|+++|++|++++|             +...+++..+.+...+.++.++.+|++|
T Consensus         5 m~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (277)
T 3tsc_A            5 MAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRD   84 (277)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             cccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC
Confidence            344689999999999999999999999999999999988             5666777777777778899999999999


Q ss_pred             HHHHHHHHHHHHhhcCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           74 RAQREKLMETVSSQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        74 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      +++++++++++.+++ |++|+||||||+...           ++.+++|+.|+++++|
T Consensus        85 ~~~v~~~~~~~~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  141 (277)
T 3tsc_A           85 FDRLRKVVDDGVAAL-GRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVM  141 (277)
T ss_dssp             HHHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHH
Confidence            999999999999999 899999999999763           4568999999987753

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.91  E-value=2.2e-24  Score=149.54  Aligned_cols=112  Identities=24%  Similarity=0.398  Sum_probs=98.5

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC------------hHHHHHHHHHHHhcCCeEEEEeccCCCHH
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN------------ETELNQRIQEWKSKGLQVSGNACDLKIRA   75 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   75 (120)
                      +.++++|+++||||++|||++++++|+++|++|++++|+            ...+++..+.+...+.++.++.+|++|++
T Consensus         5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   84 (281)
T 3s55_A            5 MADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRA   84 (281)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence            456899999999999999999999999999999999997            45566677777777889999999999999


Q ss_pred             HHHHHHHHHHhhcCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           76 QREKLMETVSSQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        76 ~~~~~~~~~~~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      +++++++++.+.+ |++|+||||||+...           ++.+++|+.|+++++|
T Consensus        85 ~v~~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  139 (281)
T 3s55_A           85 ALESFVAEAEDTL-GGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIA  139 (281)
T ss_dssp             HHHHHHHHHHHHH-TCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHHHHhc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999 899999999998652           4668899999988753

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.91  E-value=2.6e-24  Score=150.90  Aligned_cols=110  Identities=23%  Similarity=0.413  Sum_probs=100.6

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.+ 
T Consensus        28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-  106 (301)
T 3tjr_A           28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLL-  106 (301)
T ss_dssp             CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhC-
Confidence            4789999999999999999999999999999999999999988888888888899999999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      |++|+||||||+...           .+.+++|+.|+++++|
T Consensus       107 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  148 (301)
T 3tjr_A          107 GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVE  148 (301)
T ss_dssp             SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHH
Confidence            899999999998753           4568899999887653

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.91  E-value=2.5e-24  Score=150.76  Aligned_cols=111  Identities=19%  Similarity=0.293  Sum_probs=99.1

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC------------hHHHHHHHHHHHhcCCeEEEEeccCCCHHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN------------ETELNQRIQEWKSKGLQVSGNACDLKIRAQ   76 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   76 (120)
                      ..+++|+++||||++|||++++++|+++|++|++++|+            .+.+++..+++...+.++.++.+|++|+++
T Consensus        24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~  103 (299)
T 3t7c_A           24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDA  103 (299)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence            45899999999999999999999999999999999887            566777777887788899999999999999


Q ss_pred             HHHHHHHHHhhcCCcccEEEecCCCCCc------------cceeeeeccceecccC
Q 033396           77 REKLMETVSSQFDGKLNILVSSAQLPYS------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        77 ~~~~~~~~~~~~~g~id~li~~ag~~~~------------~~~~~~n~~g~~~~~~  120 (120)
                      ++++++++.+.+ |++|+||||||+...            .+.+++|+.|+++++|
T Consensus       104 v~~~~~~~~~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  158 (299)
T 3t7c_A          104 MQAAVDDGVTQL-GRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITAR  158 (299)
T ss_dssp             HHHHHHHHHHHH-SCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHHHHh-CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            999999999999 899999999998652            4568999999988753

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.91  E-value=2.8e-24  Score=149.42  Aligned_cols=113  Identities=19%  Similarity=0.262  Sum_probs=98.8

Q ss_pred             ccccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC----------------hHHHHHHHHHHHhcCCeEEEEecc
Q 033396            7 KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN----------------ETELNQRIQEWKSKGLQVSGNACD   70 (120)
Q Consensus         7 ~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~D   70 (120)
                      ++..+++|+++||||++|||++++++|+++|++|++++|+                .+.+++..+++...+.++.++.+|
T Consensus         5 m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   84 (286)
T 3uve_A            5 MTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVD   84 (286)
T ss_dssp             -CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECC
T ss_pred             CCcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcC
Confidence            3445899999999999999999999999999999999886                566777777777778899999999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCcccEEEecCCCCCc------------cceeeeeccceecccC
Q 033396           71 LKIRAQREKLMETVSSQFDGKLNILVSSAQLPYS------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~------------~~~~~~n~~g~~~~~~  120 (120)
                      ++|+++++++++++.+.+ |++|+||||||+...            .+.+++|+.|+++++|
T Consensus        85 v~~~~~v~~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  145 (286)
T 3uve_A           85 VRDYDALKAAVDSGVEQL-GRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVK  145 (286)
T ss_dssp             TTCHHHHHHHHHHHHHHH-SCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHh-CCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHH
Confidence            999999999999999999 899999999998542            4568999999988753

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.91  E-value=2.4e-24  Score=149.12  Aligned_cols=112  Identities=24%  Similarity=0.320  Sum_probs=99.2

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC------------hHHHHHHHHHHHhcCCeEEEEeccCCCHH
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN------------ETELNQRIQEWKSKGLQVSGNACDLKIRA   75 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   75 (120)
                      ..++++|+++||||++|||++++++|+++|++|++++|+            .+.+++..+.+...+.++.++.+|++|++
T Consensus         8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   87 (278)
T 3sx2_A            8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRE   87 (278)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence            456899999999999999999999999999999999987            56667777777777889999999999999


Q ss_pred             HHHHHHHHHHhhcCCcccEEEecCCCCC-------ccceeeeeccceecccC
Q 033396           76 QREKLMETVSSQFDGKLNILVSSAQLPY-------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        76 ~~~~~~~~~~~~~~g~id~li~~ag~~~-------~~~~~~~n~~g~~~~~~  120 (120)
                      +++++++++.+.+ |++|+||||||+..       |.+.+++|+.|+++++|
T Consensus        88 ~v~~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~  138 (278)
T 3sx2_A           88 SLSAALQAGLDEL-GRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIK  138 (278)
T ss_dssp             HHHHHHHHHHHHH-CCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHHHHHc-CCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999 89999999999975       35678999999988753

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.91  E-value=2.9e-24  Score=146.74  Aligned_cols=112  Identities=21%  Similarity=0.245  Sum_probs=100.8

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .+.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE   83 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999999988888888888889999999999999999999999999


Q ss_pred             cCCcccEEEecCCCCC--------------ccceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPY--------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~--------------~~~~~~~n~~g~~~~~~  120 (120)
                      + +++|+||||||+..              +.+.+++|+.|+++++|
T Consensus        84 ~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  129 (253)
T 3qiv_A           84 F-GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTR  129 (253)
T ss_dssp             H-SCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             c-CCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHH
Confidence            9 89999999999842              24668999999887653

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.91  E-value=2.4e-24  Score=147.64  Aligned_cols=110  Identities=15%  Similarity=0.215  Sum_probs=98.5

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+. 
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-   81 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH-   81 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-
Confidence            4578999999999999999999999999999999999999888888888888889999999999999999999999887 


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                       |++|+||||||+...           .+.+++|+.|+++++|
T Consensus        82 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  123 (252)
T 3h7a_A           82 -APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGR  123 (252)
T ss_dssp             -SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             -CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence             799999999998663           4568899999887653

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.91  E-value=1.5e-24  Score=150.80  Aligned_cols=111  Identities=26%  Similarity=0.264  Sum_probs=100.8

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+++
T Consensus         4 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (280)
T 3tox_A            4 SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRF   83 (280)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            34789999999999999999999999999999999999998888888887778899999999999999999999999999


Q ss_pred             CCcccEEEecCCCCC------------ccceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPY------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~------------~~~~~~~n~~g~~~~~~  120 (120)
                       |++|+||||||+..            +.+.+++|+.|+++++|
T Consensus        84 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  126 (280)
T 3tox_A           84 -GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAK  126 (280)
T ss_dssp             -SCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence             89999999999763            24678999999988753

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.91  E-value=4.2e-24  Score=147.25  Aligned_cols=111  Identities=26%  Similarity=0.345  Sum_probs=98.9

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh-cC-CeEEEEeccCCCHHHHHHHHHHHHh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KG-LQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.. .+ .++.++.+|++|+++++++++++.+
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER   83 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999999888888888876 34 4599999999999999999999999


Q ss_pred             hcCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           87 QFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      .+ |++|+||||||+...           .+.+++|+.|+++++|
T Consensus        84 ~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  127 (265)
T 3lf2_A           84 TL-GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVR  127 (265)
T ss_dssp             HH-CSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             Hc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence            99 899999999998653           4668899999887653

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.91  E-value=2.1e-25  Score=152.76  Aligned_cols=105  Identities=25%  Similarity=0.279  Sum_probs=91.0

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +++++||+++|||+++|||++++++|+++|++|++++|+..  ++..+++.+.+.++..+.+|++|+++++++++     
T Consensus         4 ~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~-----   76 (247)
T 4hp8_A            4 PFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSFT-----   76 (247)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSST-----
T ss_pred             CcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH-----
Confidence            46799999999999999999999999999999999999864  34556677778899999999999988776663     


Q ss_pred             cCCcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                      + |++|+||||||+..           |++.+++|+.|+|+++|
T Consensus        77 ~-g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~  119 (247)
T 4hp8_A           77 D-AGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQ  119 (247)
T ss_dssp             T-TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             h-CCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHH
Confidence            3 89999999999976           46789999999998764

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.91  E-value=5.4e-24  Score=147.65  Aligned_cols=112  Identities=24%  Similarity=0.302  Sum_probs=99.1

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC------------hHHHHHHHHHHHhcCCeEEEEeccCCCHH
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN------------ETELNQRIQEWKSKGLQVSGNACDLKIRA   75 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   75 (120)
                      +.++++|+++||||++|||++++++|+++|++|++++|+            ...+++...++...+.++.++.+|++|++
T Consensus         5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   84 (287)
T 3pxx_A            5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRA   84 (287)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHH
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHH
Confidence            456899999999999999999999999999999999987            56667777777777889999999999999


Q ss_pred             HHHHHHHHHHhhcCCcccEEEecCCCCC---------ccceeeeeccceecccC
Q 033396           76 QREKLMETVSSQFDGKLNILVSSAQLPY---------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        76 ~~~~~~~~~~~~~~g~id~li~~ag~~~---------~~~~~~~n~~g~~~~~~  120 (120)
                      +++++++++.+.+ |++|+||||||+..         +.+.+++|+.|+++++|
T Consensus        85 ~v~~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  137 (287)
T 3pxx_A           85 AVSRELANAVAEF-GKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVH  137 (287)
T ss_dssp             HHHHHHHHHHHHH-SCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHHHHHc-CCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHH
Confidence            9999999999999 89999999999865         24678999999887753

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.90  E-value=6.5e-25  Score=151.58  Aligned_cols=106  Identities=22%  Similarity=0.184  Sum_probs=90.6

Q ss_pred             cccccccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHH
Q 033396            4 FREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMET   83 (120)
Q Consensus         4 ~~~~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   83 (120)
                      |+.++++++||+++||||++|||++++++|+++|++|++++|+.++.          ......+.+|+++++++++++++
T Consensus         2 Mm~dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~   71 (261)
T 4h15_A            2 MMIEFLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG----------LPEELFVEADLTTKEGCAIVAEA   71 (261)
T ss_dssp             CCCCCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT----------SCTTTEEECCTTSHHHHHHHHHH
T ss_pred             cchhccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC----------CCcEEEEEcCCCCHHHHHHHHHH
Confidence            44556679999999999999999999999999999999999975421          22334788999999999999999


Q ss_pred             HHhhcCCcccEEEecCCCCC-------------ccceeeeeccceecccC
Q 033396           84 VSSQFDGKLNILVSSAQLPY-------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        84 ~~~~~~g~id~li~~ag~~~-------------~~~~~~~n~~g~~~~~~  120 (120)
                      +.+++ |++|+||||||+..             |++.+++|+.|+|+++|
T Consensus        72 ~~~~~-G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~  120 (261)
T 4h15_A           72 TRQRL-GGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDR  120 (261)
T ss_dssp             HHHHT-SSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHc-CCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999 99999999999753             35678999999998764

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.90  E-value=2.2e-24  Score=150.18  Aligned_cols=112  Identities=25%  Similarity=0.341  Sum_probs=98.0

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChH-------HHHHHHHHHHhcCCeEEEEeccCCCHHHHHHH
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET-------ELNQRIQEWKSKGLQVSGNACDLKIRAQREKL   80 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   80 (120)
                      .|++++|+++||||++|||++++++|+++|++|++++|+..       .+++..+++...+.++.++.+|++|+++++++
T Consensus         4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   83 (285)
T 3sc4_A            4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAA   83 (285)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            35688999999999999999999999999999999999865       46667777777788999999999999999999


Q ss_pred             HHHHHhhcCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           81 METVSSQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        81 ~~~~~~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      ++++.+.+ |++|+||||||+...           .+.+++|+.|+++++|
T Consensus        84 ~~~~~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  133 (285)
T 3sc4_A           84 VAKTVEQF-GGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQ  133 (285)
T ss_dssp             HHHHHHHH-SCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999 899999999998753           4567899999887753

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.90  E-value=4.8e-24  Score=146.69  Aligned_cols=112  Identities=28%  Similarity=0.410  Sum_probs=100.5

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +..+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|+++++++.++++++.+.
T Consensus        24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~  103 (262)
T 3rkr_A           24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAA  103 (262)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHh
Confidence            34588999999999999999999999999999999999999988888888888889999999999999999999999999


Q ss_pred             cCCcccEEEecCCCCC------------ccceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPY------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~------------~~~~~~~n~~g~~~~~~  120 (120)
                      + |++|+||||||+..            +...+++|+.|+++++|
T Consensus       104 ~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  147 (262)
T 3rkr_A          104 H-GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLR  147 (262)
T ss_dssp             H-SCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             c-CCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            9 89999999999832            24568899999887653

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.90  E-value=5.4e-24  Score=144.95  Aligned_cols=109  Identities=23%  Similarity=0.317  Sum_probs=99.6

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++++|+++||||++|||++++++|+++|++|++++|+....++..+++...+.++.++.+|++|+++++++++++.+.+ 
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   80 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN-   80 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT-
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc-
Confidence            4789999999999999999999999999999999999988888888888888899999999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +++|+||||||+...           .+.+++|+.|+++++
T Consensus        81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  121 (247)
T 3lyl_A           81 LAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMS  121 (247)
T ss_dssp             CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHH
Confidence            899999999999753           456889999988765

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.90  E-value=3.6e-24  Score=146.43  Aligned_cols=109  Identities=25%  Similarity=0.316  Sum_probs=96.1

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      ++++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++..   ....+.+|++|+++++++++++.++
T Consensus         4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~   80 (248)
T 3op4_A            4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD---NGKGMALNVTNPESIEAVLKAITDE   80 (248)
T ss_dssp             TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG---GEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc---cceEEEEeCCCHHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999998888777766643   4678899999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      + |++|+||||||+...           .+.+++|+.|+++++|
T Consensus        81 ~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  123 (248)
T 3op4_A           81 F-GGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSK  123 (248)
T ss_dssp             H-CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            9 899999999998753           4568999999988753

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.90  E-value=6.3e-24  Score=145.06  Aligned_cols=110  Identities=28%  Similarity=0.316  Sum_probs=98.4

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.+ 
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-   82 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL-   82 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            3678999999999999999999999999999999999888888888887777789999999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      |++|+||||||+...           .+.+++|+.|+++++|
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  124 (247)
T 2jah_A           83 GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTR  124 (247)
T ss_dssp             SCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            899999999998642           4567899999887653

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.90  E-value=4.6e-24  Score=147.51  Aligned_cols=111  Identities=26%  Similarity=0.348  Sum_probs=98.8

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +++++|+++||||++|||++++++|+++|++|+++++ +....++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~  103 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIER  103 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999988 556677777788777889999999999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      + |++|+||||||+...           ++.+++|+.|+++++|
T Consensus       104 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  146 (269)
T 4dmm_A          104 W-GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSR  146 (269)
T ss_dssp             H-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            9 899999999999752           4668999999988753

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.90  E-value=9.6e-24  Score=144.94  Aligned_cols=111  Identities=49%  Similarity=0.850  Sum_probs=98.6

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   84 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999999888887778887777889999999999999999999999987


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      ++++|+||||||+...           .+.+++|+.|+++++
T Consensus        85 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~  126 (260)
T 2ae2_A           85 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLS  126 (260)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHH
Confidence            5689999999998642           456789999988765

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.90  E-value=8.6e-25  Score=152.57  Aligned_cols=118  Identities=20%  Similarity=0.221  Sum_probs=102.2

Q ss_pred             cccccccccccCcEEEEecCCCchHHHHHHHHHHCCC---EEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCHHH
Q 033396            2 SDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGA---IVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIRAQ   76 (120)
Q Consensus         2 ~~~~~~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~---~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~   76 (120)
                      ++...++..+++|+++||||++|||++++++|+++|+   +|++++|+.+.+++..+++...  +.++.++.+|++|+++
T Consensus        22 ~~~~~~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~  101 (287)
T 3rku_A           22 SQGRKAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEK  101 (287)
T ss_dssp             TTCHHHHHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGG
T ss_pred             ccCccchhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHH
Confidence            3333334568999999999999999999999999997   9999999999888888888764  6789999999999999


Q ss_pred             HHHHHHHHHhhcCCcccEEEecCCCCC------------ccceeeeeccceecccC
Q 033396           77 REKLMETVSSQFDGKLNILVSSAQLPY------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        77 ~~~~~~~~~~~~~g~id~li~~ag~~~------------~~~~~~~n~~g~~~~~~  120 (120)
                      ++++++++.+.+ |++|+||||||+..            |.+.+++|+.|+++++|
T Consensus       102 v~~~~~~~~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  156 (287)
T 3rku_A          102 IKPFIENLPQEF-KDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQ  156 (287)
T ss_dssp             HHHHHHTSCGGG-CSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHHHhc-CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999 89999999999864            24668999999988753

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.90  E-value=4.1e-24  Score=147.20  Aligned_cols=113  Identities=19%  Similarity=0.251  Sum_probs=98.9

Q ss_pred             ccccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC---hHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHH
Q 033396            7 KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN---ETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMET   83 (120)
Q Consensus         7 ~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   83 (120)
                      +++++++|+++||||++|||++++++|+++|++|++++|.   .+.+++..+++...+.++.++.+|++|++++++++++
T Consensus         5 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   84 (262)
T 3ksu_A            5 KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDF   84 (262)
T ss_dssp             CCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            4567899999999999999999999999999999998764   3456777778877788999999999999999999999


Q ss_pred             HHhhcCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           84 VSSQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        84 ~~~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      +.+++ |++|+||||||+...           .+.+++|+.|+++++|
T Consensus        85 ~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  131 (262)
T 3ksu_A           85 AEKEF-GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIK  131 (262)
T ss_dssp             HHHHH-CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999 899999999998753           4567899999887653

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.90  E-value=5.5e-24  Score=146.29  Aligned_cols=109  Identities=19%  Similarity=0.286  Sum_probs=97.7

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .++|+++||||++|||++++++|+++|++|+++ +|+...+++..+++...+.++.++.+|++|+++++++++++.+++ 
T Consensus         2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   80 (258)
T 3oid_A            2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETF-   80 (258)
T ss_dssp             -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            468999999999999999999999999999987 888888888888888888899999999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      |++|+||||||+...           ++.+++|+.|+++++|
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  122 (258)
T 3oid_A           81 GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQ  122 (258)
T ss_dssp             SCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            899999999997552           4568999999887753

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.90  E-value=9.5e-24  Score=146.01  Aligned_cols=113  Identities=55%  Similarity=0.869  Sum_probs=99.5

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .+.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   95 (273)
T 1ae1_A           16 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV   95 (273)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999988888887888777778999999999999999999999988


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      +++++|+||||||+...           .+.+++|+.|+++++|
T Consensus        96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  139 (273)
T 1ae1_A           96 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQ  139 (273)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            75689999999998642           4567889999887653

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.90  E-value=6.5e-24  Score=147.17  Aligned_cols=110  Identities=18%  Similarity=0.335  Sum_probs=98.4

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh-cCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.. .+.++.++.+|++|+++++++++++.+++
T Consensus        24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  103 (277)
T 4fc7_A           24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF  103 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            47899999999999999999999999999999999999888777777754 37789999999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                       |++|+||||||+...           .+.+++|+.|+++++|
T Consensus       104 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  145 (277)
T 4fc7_A          104 -GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSR  145 (277)
T ss_dssp             -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             -CCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence             899999999997652           4668999999987753

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.90  E-value=7.7e-24  Score=144.09  Aligned_cols=119  Identities=30%  Similarity=0.332  Sum_probs=102.5

Q ss_pred             CcccccccccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcC-CeEEEEeccC--CCHHHH
Q 033396            1 MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-LQVSGNACDL--KIRAQR   77 (120)
Q Consensus         1 ~~~~~~~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~--~~~~~~   77 (120)
                      |.+++..+..+++|+++||||++|||++++++|+++|++|++++|+...+++..+++...+ ..+.++.+|+  ++++++
T Consensus         2 m~~~~~~~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~   81 (247)
T 3i1j_A            2 MFDYSAHPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQY   81 (247)
T ss_dssp             CCCCCCCTTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHH
T ss_pred             CCCCCCCCccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHH
Confidence            5566666677999999999999999999999999999999999999998888888887664 5666777777  999999


Q ss_pred             HHHHHHHHhhcCCcccEEEecCCCCC------------ccceeeeeccceecccC
Q 033396           78 EKLMETVSSQFDGKLNILVSSAQLPY------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        78 ~~~~~~~~~~~~g~id~li~~ag~~~------------~~~~~~~n~~g~~~~~~  120 (120)
                      .++++++.+.+ +++|+||||||+..            +.+.+++|+.|++.++|
T Consensus        82 ~~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  135 (247)
T 3i1j_A           82 RELAARVEHEF-GRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTR  135 (247)
T ss_dssp             HHHHHHHHHHH-SCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHHhC-CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            99999999999 89999999999853            24567899999887653

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.90  E-value=4.2e-24  Score=147.92  Aligned_cols=111  Identities=24%  Similarity=0.366  Sum_probs=97.4

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH-------HHHHHHHHHhcCCeEEEEeccCCCHHHHHHHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-------LNQRIQEWKSKGLQVSGNACDLKIRAQREKLM   81 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   81 (120)
                      +++++|+++||||++|||++++++|+++|++|++++|+...       +++..+++...+.++.++.+|++|++++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   81 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV   81 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            45789999999999999999999999999999999998642       55666667667889999999999999999999


Q ss_pred             HHHHhhcCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           82 ETVSSQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        82 ~~~~~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      +++.+++ |++|+||||||+...           ++.+++|+.|+++++|
T Consensus        82 ~~~~~~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  130 (274)
T 3e03_A           82 AATVDTF-GGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQ  130 (274)
T ss_dssp             HHHHHHH-SCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHH
T ss_pred             HHHHHHc-CCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHH
Confidence            9999999 899999999998652           4567899999887753

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.90  E-value=2.6e-24  Score=149.65  Aligned_cols=111  Identities=26%  Similarity=0.329  Sum_probs=94.0

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcC-CeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-LQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+ ..+.++.+|++|+++++++++++.+.
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  108 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAE  108 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34789999999999999999999999999999999999988888888776653 44589999999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc------------cceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPYS------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~------------~~~~~~n~~g~~~~~~  120 (120)
                      + |++|+||||||+...            ++.+++|+.|+++++|
T Consensus       109 ~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  152 (281)
T 4dry_A          109 F-ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQ  152 (281)
T ss_dssp             H-SCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            9 899999999998542            4568999999887653

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.90  E-value=5.9e-24  Score=146.14  Aligned_cols=111  Identities=20%  Similarity=0.176  Sum_probs=98.0

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +++++|+++||||++|||++++++|+++|++|+++ +++.+..++..+++...+.++.++.+|++|+++++++++++.++
T Consensus         4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (259)
T 3edm_A            4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK   83 (259)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45889999999999999999999999999999998 56667777777888777888999999999999999999999999


Q ss_pred             cCCcccEEEecCCCCC------------ccceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPY------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~------------~~~~~~~n~~g~~~~~~  120 (120)
                      + |++|+||||||+..            |.+.+++|+.|+++++|
T Consensus        84 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  127 (259)
T 3edm_A           84 F-GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAK  127 (259)
T ss_dssp             H-CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             h-CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHH
Confidence            9 89999999999762            24668999999987753

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.90  E-value=5e-24  Score=145.61  Aligned_cols=107  Identities=28%  Similarity=0.338  Sum_probs=96.1

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+.+ 
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   78 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKKARAIAADISDPGSVKALFAEIQALT-   78 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHHH-
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHC-
Confidence            478999999999999999999999999999999999998887776665   6788999999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      |++|+||||||+...           ++.+++|+.|+++++|
T Consensus        79 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  120 (247)
T 3rwb_A           79 GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTR  120 (247)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            899999999998653           4668999999988753

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.90  E-value=7.4e-24  Score=149.52  Aligned_cols=111  Identities=21%  Similarity=0.325  Sum_probs=98.1

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC------------hHHHHHHHHHHHhcCCeEEEEeccCCCHHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN------------ETELNQRIQEWKSKGLQVSGNACDLKIRAQ   76 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   76 (120)
                      ..+++|+++||||++|||++++++|+++|++|++++++            .+.+++..+.+...+.++.++.+|++|+++
T Consensus        42 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~  121 (317)
T 3oec_A           42 NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLAS  121 (317)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            35789999999999999999999999999999999876            556677777777778899999999999999


Q ss_pred             HHHHHHHHHhhcCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           77 REKLMETVSSQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        77 ~~~~~~~~~~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      ++++++++.+.+ |++|+||||||+...           .+.+++|+.|+++++|
T Consensus       122 v~~~~~~~~~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  175 (317)
T 3oec_A          122 LQAVVDEALAEF-GHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACR  175 (317)
T ss_dssp             HHHHHHHHHHHH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            999999999999 899999999998753           4568999999987653

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.90  E-value=9.5e-24  Score=144.96  Aligned_cols=109  Identities=25%  Similarity=0.309  Sum_probs=95.7

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +..+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +..+.++.+|++|+++++++++++.++
T Consensus         3 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~   79 (259)
T 4e6p_A            3 MKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVEH   79 (259)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999988877776665   556889999999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      + |++|+||||||+...           .+.+++|+.|+++++|
T Consensus        80 ~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  122 (259)
T 4e6p_A           80 A-GGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQ  122 (259)
T ss_dssp             S-SSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             c-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            9 899999999998652           4567899999887653

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.90  E-value=5.9e-24  Score=147.74  Aligned_cols=111  Identities=24%  Similarity=0.279  Sum_probs=96.9

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      ..+.+|+++||||++|||++++++|+++|++|+++++ +.+.+++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus        25 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  104 (280)
T 4da9_A           25 TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAE  104 (280)
T ss_dssp             SCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred             hccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999986 666777888888877889999999999999999999999999


Q ss_pred             cCCcccEEEecCCCCC-------------ccceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPY-------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~-------------~~~~~~~n~~g~~~~~~  120 (120)
                      + |++|+||||||+..             |.+.+++|+.|+++++|
T Consensus       105 ~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  149 (280)
T 4da9_A          105 F-GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQ  149 (280)
T ss_dssp             H-SCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHH
T ss_pred             c-CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            9 89999999999832             25678999999987653

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.90  E-value=5.8e-24  Score=151.88  Aligned_cols=112  Identities=24%  Similarity=0.316  Sum_probs=98.8

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH-------HHHHHHHHHhcCCeEEEEeccCCCHHHHHHH
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-------LNQRIQEWKSKGLQVSGNACDLKIRAQREKL   80 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   80 (120)
                      +..+++|+++||||++|||++++++|+++|++|++++|+...       +++..+++...+.++.++.+|++|+++++++
T Consensus        40 ~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~  119 (346)
T 3kvo_A           40 TGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAA  119 (346)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence            345899999999999999999999999999999999998653       5566777777788999999999999999999


Q ss_pred             HHHHHhhcCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           81 METVSSQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        81 ~~~~~~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      ++++.+.+ |++|+||||||+...           .+.+++|+.|+++++|
T Consensus       120 ~~~~~~~~-g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  169 (346)
T 3kvo_A          120 VEKAIKKF-GGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASK  169 (346)
T ss_dssp             HHHHHHHH-SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHH
T ss_pred             HHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999 899999999998652           4668999999987753

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.90  E-value=9.5e-24  Score=144.86  Aligned_cols=112  Identities=29%  Similarity=0.442  Sum_probs=98.7

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +..+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++..+.+|++|+++++++++++.+.
T Consensus         9 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (260)
T 2zat_A            9 RKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNL   88 (260)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            34588999999999999999999999999999999999988887777778777778999999999999999999999999


Q ss_pred             cCCcccEEEecCCCCC------------ccceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPY------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~------------~~~~~~~n~~g~~~~~~  120 (120)
                      + |++|+||||||+..            |.+.+++|+.|+++++|
T Consensus        89 ~-g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~  132 (260)
T 2zat_A           89 H-GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTK  132 (260)
T ss_dssp             H-SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            9 89999999999853            24567899999887653

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.90  E-value=6e-24  Score=146.88  Aligned_cols=111  Identities=23%  Similarity=0.324  Sum_probs=95.2

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      |++++|+++||||++|||++++++|+++|++|+++ .++....++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus        23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  102 (267)
T 3u5t_A           23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA  102 (267)
T ss_dssp             ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999988 45666777777888778889999999999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      + |++|+||||||+...           ++.+++|+.|+++++|
T Consensus       103 ~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  145 (267)
T 3u5t_A          103 F-GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLR  145 (267)
T ss_dssp             H-SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHH
Confidence            9 899999999998752           4567899999887653

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.90  E-value=5.5e-24  Score=145.69  Aligned_cols=111  Identities=19%  Similarity=0.281  Sum_probs=97.6

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc--C-CeEEEEeccCCCHHHHHHHHHHHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--G-LQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...  + .++.++.+|++|+++++++++++.
T Consensus         3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (250)
T 3nyw_A            3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH   82 (250)
T ss_dssp             --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999998888888877654  3 678899999999999999999999


Q ss_pred             hhcCCcccEEEecCCCCCc----------cceeeeeccceecccC
Q 033396           86 SQFDGKLNILVSSAQLPYS----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~~----------~~~~~~n~~g~~~~~~  120 (120)
                      +.+ |++|+||||||+...          .+.+++|+.|+++++|
T Consensus        83 ~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  126 (250)
T 3nyw_A           83 QKY-GAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILK  126 (250)
T ss_dssp             HHH-CCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHH
T ss_pred             Hhc-CCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999 899999999998653          4668899999887653

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.90  E-value=7.4e-24  Score=145.09  Aligned_cols=112  Identities=24%  Similarity=0.253  Sum_probs=98.7

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc-CCeEEEEeccC--CCHHHHHHHHHHH
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGNACDL--KIRAQREKLMETV   84 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~--~~~~~~~~~~~~~   84 (120)
                      ...+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +..+.++.+|+  +++++++++++++
T Consensus         7 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (252)
T 3f1l_A            7 QDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRI   86 (252)
T ss_dssp             TTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHH
Confidence            34589999999999999999999999999999999999998888888877665 44788999999  9999999999999


Q ss_pred             HhhcCCcccEEEecCCCCC------------ccceeeeeccceecccC
Q 033396           85 SSQFDGKLNILVSSAQLPY------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        85 ~~~~~g~id~li~~ag~~~------------~~~~~~~n~~g~~~~~~  120 (120)
                      .+.+ |++|+||||||+..            |.+.+++|+.|+++++|
T Consensus        87 ~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  133 (252)
T 3f1l_A           87 AVNY-PRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQ  133 (252)
T ss_dssp             HHHC-SCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHhC-CCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence            9999 89999999999853            24668999999988753

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.90  E-value=1.1e-23  Score=145.43  Aligned_cols=111  Identities=32%  Similarity=0.512  Sum_probs=97.3

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH-HhcCCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW-KSKGLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      ...+++|+++||||++|||++++++|+++|++|++++|+...+++..+++ ...+.++.++.+|++++++++++++++.+
T Consensus        16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   95 (267)
T 1vl8_A           16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE   95 (267)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999988877777776 44467888999999999999999999999


Q ss_pred             hcCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           87 QFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      .+ |++|+||||||+...           ++.+++|+.|+++++
T Consensus        96 ~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  138 (267)
T 1vl8_A           96 KF-GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVC  138 (267)
T ss_dssp             HH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             Hc-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHH
Confidence            99 899999999998652           456789999988765

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.90  E-value=8.6e-24  Score=146.64  Aligned_cols=111  Identities=26%  Similarity=0.445  Sum_probs=97.6

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      ++++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+ ++.++.+|++|+++++++++++.+.
T Consensus        24 ~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (276)
T 2b4q_A           24 YFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGEL  102 (276)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHHh
Confidence            456899999999999999999999999999999999999888877777776555 7889999999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      + +++|+||||||+...           .+.+++|+.|+++++|
T Consensus       103 ~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  145 (276)
T 2b4q_A          103 S-ARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQ  145 (276)
T ss_dssp             C-SCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            9 899999999998642           4568899999887653

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.90  E-value=9.3e-24  Score=145.85  Aligned_cols=109  Identities=28%  Similarity=0.319  Sum_probs=96.0

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      ++++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+.
T Consensus        22 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (266)
T 3grp_A           22 MFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---GKDVFVFSANLSDRKSIKQLAEVAERE   98 (266)
T ss_dssp             TTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEeecCCHHHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999988877665554   678999999999999999999999999


Q ss_pred             cCCcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                      + +++|+||||||+..           |.+.+++|+.|+++++|
T Consensus        99 ~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  141 (266)
T 3grp_A           99 M-EGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTR  141 (266)
T ss_dssp             H-TSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence            9 89999999999875           25668899999887653

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.90  E-value=9.9e-24  Score=146.05  Aligned_cols=111  Identities=32%  Similarity=0.383  Sum_probs=97.8

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN-ETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +++++|+++||||++|||++++++|+++|++|+++++. ....++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (271)
T 3v2g_A           27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA  106 (271)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999998665 45677777888777889999999999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      + |++|+||||||+...           ++.+++|+.|+++++|
T Consensus       107 ~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  149 (271)
T 3v2g_A          107 L-GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIR  149 (271)
T ss_dssp             H-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             c-CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            9 899999999998653           4668899999887653

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.90  E-value=1.9e-23  Score=144.86  Aligned_cols=110  Identities=27%  Similarity=0.487  Sum_probs=98.7

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.+ 
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   97 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY-   97 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHh-
Confidence            5789999999999999999999999999999999999988887778887777789999999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      |++|+||||||+...           .+.+++|+.|+++++|
T Consensus        98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  139 (277)
T 2rhc_B           98 GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK  139 (277)
T ss_dssp             CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            899999999998652           4567899999887653

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.90  E-value=1.3e-23  Score=146.06  Aligned_cols=112  Identities=26%  Similarity=0.339  Sum_probs=97.5

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhc-CCeEEEEeccCCCHHHHHHHHHHHH
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSK-GLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      ++++.+|+++||||++|||++++++|+++|++|++++| +...+++..+++... +.++.++.+|++|+++++++++++.
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   99 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVA   99 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence            34588999999999999999999999999999999999 556677777777665 6789999999999999999999999


Q ss_pred             hhcCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           86 SQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      +.+ |++|+||||||+...           .+.+++|+.|+++++|
T Consensus       100 ~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  144 (281)
T 3v2h_A          100 DRF-GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIR  144 (281)
T ss_dssp             HHT-SSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHC-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            999 899999999999652           4568899999987753

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.90  E-value=1.2e-23  Score=145.39  Aligned_cols=111  Identities=30%  Similarity=0.404  Sum_probs=98.4

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN-ETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      ..+++|+++||||++|||++++++|+++|++|+++++. ....++..+++...+.++.++.+|++|+++++++++++.++
T Consensus        14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   93 (270)
T 3is3_A           14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH   93 (270)
T ss_dssp             TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35899999999999999999999999999999998764 55677778888888889999999999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      + |++|+||||||+...           ++.+++|+.|+++++|
T Consensus        94 ~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  136 (270)
T 3is3_A           94 F-GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAR  136 (270)
T ss_dssp             H-SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            9 899999999999753           4668999999988753

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.90  E-value=1.5e-23  Score=144.12  Aligned_cols=110  Identities=27%  Similarity=0.362  Sum_probs=97.2

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc-CCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +++++|+++||||++|||++++++|+++|++|++++|+...+++..+++... +.++.++.+|++|+++++++++++.+.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS   82 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988877777777655 678899999999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      + |++|+||||||+...           .+.+++|+.|+++++
T Consensus        83 ~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  124 (263)
T 3ai3_A           83 F-GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLA  124 (263)
T ss_dssp             H-SSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHH
Confidence            9 899999999998642           456788999888765

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.90  E-value=1.3e-23  Score=143.36  Aligned_cols=109  Identities=25%  Similarity=0.366  Sum_probs=96.7

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      +.+|+++||||++|||++++++|+++|++|+++++ +.+..++..+++...+.++.++.+|++|+++++++++++.+++ 
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-   80 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-   80 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            46899999999999999999999999999999877 4566777788888788889999999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      |++|+||||||+...           ++.+++|+.|+++++|
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  122 (246)
T 3osu_A           81 GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQ  122 (246)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            899999999998752           4578999999988753

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.90  E-value=8.7e-24  Score=146.78  Aligned_cols=108  Identities=24%  Similarity=0.309  Sum_probs=95.4

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+.+
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVAAF  101 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999999988877776665   6678899999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                       |++|+||||||+...           ++.+++|+.|+++++|
T Consensus       102 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  143 (277)
T 3gvc_A          102 -GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTK  143 (277)
T ss_dssp             -SSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence             899999999999653           4668899999887753

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.90  E-value=1.5e-23  Score=145.49  Aligned_cols=108  Identities=27%  Similarity=0.390  Sum_probs=95.7

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+.+
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---GSKAFGVRVDVSSAKDAESMVEKTTAKW   99 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            5688999999999999999999999999999999999988777666654   6678899999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                       |++|+||||||+...           ++.+++|+.|+++++|
T Consensus       100 -g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  141 (277)
T 4dqx_A          100 -GRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSK  141 (277)
T ss_dssp             -SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             -CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence             899999999998652           4567899999887653

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.90  E-value=1.7e-23  Score=142.73  Aligned_cols=108  Identities=29%  Similarity=0.392  Sum_probs=96.3

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      +++|+++||||++|||++++++|+++|++|++++| +.+.+++..+++...+.++.++.+|++|+++++++++++.+.+ 
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   80 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF-   80 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            57899999999999999999999999999999999 7777777777777767789999999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      |++|+||||||+...           ++.+++|+.|+++++
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~  121 (246)
T 2uvd_A           81 GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCT  121 (246)
T ss_dssp             SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            899999999998652           456889999988765

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.90  E-value=2.1e-23  Score=143.47  Aligned_cols=110  Identities=23%  Similarity=0.374  Sum_probs=98.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++++++++++++++.+.+ 
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   82 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF-   82 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-
Confidence            4689999999999999999999999999999999999888888888887777789999999999999999999999999 


Q ss_pred             CcccEEEecCCCC-C-----------ccceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLP-Y-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~-~-----------~~~~~~~n~~g~~~~~~  120 (120)
                      |++|+||||||+. .           |.+.+++|+.|+++++|
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  125 (262)
T 1zem_A           83 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLK  125 (262)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHH
Confidence            8999999999986 2           24568899999887653

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.89  E-value=1.4e-23  Score=144.11  Aligned_cols=107  Identities=27%  Similarity=0.428  Sum_probs=95.7

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+++|+++||||++|||++++++|+++|++|++++|+++.+++..+++   +.++.++.+|++|+++++++++++.+.+ 
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   80 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQTL-   80 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHHh-
Confidence            478999999999999999999999999999999999988877776665   5678999999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      |++|+||||||+...           ++.+++|+.|+++++|
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  122 (255)
T 4eso_A           81 GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQ  122 (255)
T ss_dssp             SSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            899999999999753           4568999999887653

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.89  E-value=2e-23  Score=147.49  Aligned_cols=110  Identities=24%  Similarity=0.380  Sum_probs=98.8

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCC--eEEEEeccCCCHHHHHHHHHHHHh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL--QVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      +++.+|+++||||++|||++++++|+++|++|++++|+...+++..+++...+.  .+.++.+|++++++++++++++.+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   83 (319)
T 3ioy_A            4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEA   83 (319)
T ss_dssp             CCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999988888888876554  899999999999999999999999


Q ss_pred             hcCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           87 QFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      .+ +++|+||||||+...           .+.+++|+.|+++++
T Consensus        84 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  126 (319)
T 3ioy_A           84 RF-GPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGV  126 (319)
T ss_dssp             HT-CCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             hC-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHH
Confidence            99 899999999998653           456899999988765

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.89  E-value=1e-23  Score=148.99  Aligned_cols=110  Identities=24%  Similarity=0.322  Sum_probs=99.0

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC----------hHHHHHHHHHHHhcCCeEEEEeccCCCHHHHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN----------ETELNQRIQEWKSKGLQVSGNACDLKIRAQRE   78 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   78 (120)
                      ..+++|+++||||++|||++++++|+++|++|++++|+          ...+++..+++...+.++.++.+|++|++++.
T Consensus        23 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  102 (322)
T 3qlj_A           23 GVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAA  102 (322)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence            35899999999999999999999999999999999987          56677788888888889999999999999999


Q ss_pred             HHHHHHHhhcCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           79 KLMETVSSQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        79 ~~~~~~~~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      ++++++.+.+ |++|+||||||+...           .+.+++|+.|+++++
T Consensus       103 ~~~~~~~~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~  153 (322)
T 3qlj_A          103 GLIQTAVETF-GGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATM  153 (322)
T ss_dssp             HHHHHHHHHH-SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHH
Confidence            9999999999 899999999999763           456889999988765

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.89  E-value=2.7e-23  Score=145.51  Aligned_cols=112  Identities=24%  Similarity=0.395  Sum_probs=97.8

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCC---eEEEEeccCCCHHHHHHHHHHH
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL---QVSGNACDLKIRAQREKLMETV   84 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~   84 (120)
                      ++.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.   ++.++.+|++|+++++++++++
T Consensus        21 m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  100 (297)
T 1xhl_A           21 MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT  100 (297)
T ss_dssp             --CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999999888888777776665   7899999999999999999999


Q ss_pred             HhhcCCcccEEEecCCCCCc-------------cceeeeeccceecccC
Q 033396           85 SSQFDGKLNILVSSAQLPYS-------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        85 ~~~~~g~id~li~~ag~~~~-------------~~~~~~n~~g~~~~~~  120 (120)
                      .+.+ |++|+||||||+...             .+.+++|+.|+++++|
T Consensus       101 ~~~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  148 (297)
T 1xhl_A          101 LAKF-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQ  148 (297)
T ss_dssp             HHHH-SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHhc-CCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHH
Confidence            9999 899999999998642             3468899999887653

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.89  E-value=2.2e-23  Score=144.01  Aligned_cols=111  Identities=21%  Similarity=0.252  Sum_probs=97.6

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN-ETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      .+++++|+++||||++|||++++++|+++|++|++++|+ ....+...+.+...+.++.++.+|+++++++.++++++.+
T Consensus        24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~  103 (271)
T 4iin_A           24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQ  103 (271)
T ss_dssp             CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            456899999999999999999999999999999999995 4555666677777788999999999999999999999999


Q ss_pred             hcCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           87 QFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      .+ +++|+||||||+...           .+.+++|+.|+++++
T Consensus       104 ~~-g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  146 (271)
T 4iin_A          104 SD-GGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGC  146 (271)
T ss_dssp             HH-SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             hc-CCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHH
Confidence            99 899999999999763           456789999988765

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.89  E-value=1.3e-23  Score=142.77  Aligned_cols=105  Identities=18%  Similarity=0.089  Sum_probs=91.9

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      ++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.   ..+.++.+|++|+++++++++++.+.+ |+
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~   77 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG---NAVIGIVADLAHHEDVDVAFAAAVEWG-GL   77 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---GGEEEEECCTTSHHHHHHHHHHHHHHH-CS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---CCceEEECCCCCHHHHHHHHHHHHHhc-CC
Confidence            57899999999999999999999999999999999988887777663   358899999999999999999999999 89


Q ss_pred             ccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           92 LNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        92 id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      +|+||||||+...           .+.+++|+.|+++++|
T Consensus        78 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  117 (235)
T 3l6e_A           78 PELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQ  117 (235)
T ss_dssp             CSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999998652           4568899999887653

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.89  E-value=3.2e-23  Score=142.56  Aligned_cols=110  Identities=24%  Similarity=0.262  Sum_probs=98.2

Q ss_pred             ccccCcEEEEecCC-CchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc-CCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396            9 WSLKGMTALVTGGT-KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus         9 ~~~~~~~~litGa~-~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      +.+++|+++||||+ +|||++++++|+++|++|++++|+...+++..+++... +.++.++.+|++|+++++++++++.+
T Consensus        18 ~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (266)
T 3o38_A           18 GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVE   97 (266)
T ss_dssp             STTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            45899999999997 59999999999999999999999999888888888665 47899999999999999999999999


Q ss_pred             hcCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           87 QFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      .+ +++|+||||||+...           .+.+++|+.|+++++
T Consensus        98 ~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  140 (266)
T 3o38_A           98 KA-GRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRAT  140 (266)
T ss_dssp             HH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             Hh-CCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHH
Confidence            99 899999999998653           456788999888765

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.89  E-value=1.5e-23  Score=144.98  Aligned_cols=110  Identities=25%  Similarity=0.304  Sum_probs=95.9

Q ss_pred             ccccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396            7 KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus         7 ~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      +.+.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +..+.++.+|++|+++++++++++.+
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (271)
T 3tzq_B            5 MTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---GRGAVHHVVDLTNEVSVRALIDFTID   81 (271)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHHHHH
Confidence            345689999999999999999999999999999999999988777776665   66788899999999999999999999


Q ss_pred             hcCCcccEEEecCCCCCc-------------cceeeeeccceecccC
Q 033396           87 QFDGKLNILVSSAQLPYS-------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~~-------------~~~~~~n~~g~~~~~~  120 (120)
                      ++ |++|+||||||+...             .+.+++|+.|+++++|
T Consensus        82 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  127 (271)
T 3tzq_B           82 TF-GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCK  127 (271)
T ss_dssp             HH-SCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             Hc-CCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHH
Confidence            99 899999999998732             4568899999988753

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.89  E-value=8e-24  Score=145.12  Aligned_cols=108  Identities=26%  Similarity=0.290  Sum_probs=86.7

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++   +.++.++.+|++|+++++++++++.+++
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL---GAAVRFRNADVTNEADATAALAFAKQEF   79 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5588999999999999999999999999999999999987766665554   5678899999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc---------------cceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPYS---------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~~---------------~~~~~~n~~g~~~~~~  120 (120)
                       |++|+||||||+...               .+.+++|+.|+++++|
T Consensus        80 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  125 (257)
T 3tpc_A           80 -GHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIR  125 (257)
T ss_dssp             -SCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHH
Confidence             899999999998742               3557899999887753

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.89  E-value=1.4e-23  Score=142.02  Aligned_cols=108  Identities=24%  Similarity=0.365  Sum_probs=95.7

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHH-hcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK-SKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      ++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++. ..+.++.++.+|++|+++++++++++.+.+ +
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g   79 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERF-G   79 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHH-S
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhc-C
Confidence            36899999999999999999999999999999999988888888776 457889999999999999999999999999 8


Q ss_pred             cccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           91 KLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        91 ~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      ++|+||||||+...           .+.+++|+.|+++++|
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  120 (235)
T 3l77_A           80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLK  120 (235)
T ss_dssp             SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999998753           4568899999887753

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.89  E-value=1.7e-23  Score=144.99  Aligned_cols=108  Identities=22%  Similarity=0.260  Sum_probs=93.4

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ..+.+|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+++
T Consensus        24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  100 (272)
T 4dyv_A           24 SKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI---GDDALCVPTDVTDPDSVRALFTATVEKF  100 (272)
T ss_dssp             ----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---TSCCEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3478999999999999999999999999999999999988887777666   4678899999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc------------cceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPYS------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~~------------~~~~~~n~~g~~~~~~  120 (120)
                       |++|+||||||+...            .+.+++|+.|+++++|
T Consensus       101 -g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  143 (272)
T 4dyv_A          101 -GRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQ  143 (272)
T ss_dssp             -SCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHH
Confidence             899999999998542            4668999999887753

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.89  E-value=5e-23  Score=140.76  Aligned_cols=111  Identities=26%  Similarity=0.379  Sum_probs=98.2

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .+++++|+++||||++|||++++++|+++|++|++++|+....++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus         8 ~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (260)
T 3awd_A            8 KLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQ   87 (260)
T ss_dssp             GGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999988877777777777778999999999999999999999999


Q ss_pred             cCCcccEEEecCCCCC-c-----------cceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPY-S-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~-~-----------~~~~~~n~~g~~~~~  119 (120)
                      + +++|+||||||+.. .           .+.+++|+.|+++++
T Consensus        88 ~-~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  130 (260)
T 3awd_A           88 E-GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSC  130 (260)
T ss_dssp             H-SCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHH
Confidence            9 89999999999765 1           355788998887764

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.89  E-value=4.9e-23  Score=143.77  Aligned_cols=110  Identities=27%  Similarity=0.368  Sum_probs=95.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH-HHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-LNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ++++|+++||||++|||++++++|+++|++|++++|+... .+...+.+...+.++.++.+|++|+++++++++++.+++
T Consensus        44 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  123 (291)
T 3ijr_A           44 KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL  123 (291)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999999998764 444555566668899999999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc------------cceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPYS------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~~------------~~~~~~n~~g~~~~~~  120 (120)
                       |++|+||||||+...            .+.+++|+.|+++++|
T Consensus       124 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  166 (291)
T 3ijr_A          124 -GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTK  166 (291)
T ss_dssp             -SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             -CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence             899999999998642            4668999999988753

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.89  E-value=2.4e-23  Score=144.64  Aligned_cols=107  Identities=26%  Similarity=0.400  Sum_probs=94.0

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++...++   +.++.++.+|+++++++.++++++.+.+ 
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   77 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH---GGNAVGVVGDVRSLQDQKRAAERCLAAF-   77 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---BTTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc---CCcEEEEEcCCCCHHHHHHHHHHHHHhc-
Confidence            478999999999999999999999999999999999988776665543   6788999999999999999999999999 


Q ss_pred             CcccEEEecCCCCC----------------ccceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPY----------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~----------------~~~~~~~n~~g~~~~~~  120 (120)
                      |++|+||||||+..                |++.+++|+.|+++++|
T Consensus        78 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  124 (281)
T 3zv4_A           78 GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVK  124 (281)
T ss_dssp             SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHH
Confidence            89999999999854                23457899999988753

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.89  E-value=3.8e-23  Score=141.77  Aligned_cols=109  Identities=30%  Similarity=0.378  Sum_probs=96.0

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      ++++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++++++++++++++.+.
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAADISKEADVDAAVEAALSK   80 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            45689999999999999999999999999999999999998887776655   667899999999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc------------cceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPYS------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~------------~~~~~~n~~g~~~~~~  120 (120)
                      + +++|+||||||+...            .+.+++|+.|+++++|
T Consensus        81 ~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  124 (261)
T 3n74_A           81 F-GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTS  124 (261)
T ss_dssp             H-SCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             c-CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            9 899999999998651            3567899999887653

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.89  E-value=8.5e-24  Score=144.43  Aligned_cols=99  Identities=22%  Similarity=0.359  Sum_probs=86.0

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      ++||+++|||+++|||++++++|+++|++|++++|+.+.+++      ..+.++..+.+|++|+++++++++    ++ |
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~------~~~~~~~~~~~Dv~~~~~v~~~~~----~~-g   77 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA------PRHPRIRREELDITDSQRLQRLFE----AL-P   77 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS------CCCTTEEEEECCTTCHHHHHHHHH----HC-S
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh------hhcCCeEEEEecCCCHHHHHHHHH----hc-C
Confidence            689999999999999999999999999999999998765431      235688999999999999887775    46 8


Q ss_pred             cccEEEecCCCCC---------ccceeeeeccceecccC
Q 033396           91 KLNILVSSAQLPY---------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        91 ~id~li~~ag~~~---------~~~~~~~n~~g~~~~~~  120 (120)
                      ++|+||||||+..         |++.+++|+.|+|+++|
T Consensus        78 ~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~  116 (242)
T 4b79_A           78 RLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQ  116 (242)
T ss_dssp             CCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            9999999999976         46789999999998764

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.89  E-value=6.2e-23  Score=142.28  Aligned_cols=109  Identities=22%  Similarity=0.352  Sum_probs=96.5

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCC---eEEEEeccCCCHHHHHHHHHHHHh
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL---QVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.   ++.++.+|++|+++++++++++.+
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   82 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            36799999999999999999999999999999999999888877777776655   789999999999999999999999


Q ss_pred             hcCCcccEEEecCCCCCc---------------cceeeeeccceeccc
Q 033396           87 QFDGKLNILVSSAQLPYS---------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~~---------------~~~~~~n~~g~~~~~  119 (120)
                      .+ |++|+||||||+...               .+.+++|+.|+++++
T Consensus        83 ~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~  129 (280)
T 1xkq_A           83 QF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMT  129 (280)
T ss_dssp             HH-SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHH
T ss_pred             hc-CCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHH
Confidence            99 899999999998642               345788999888765

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.89  E-value=2.9e-23  Score=142.52  Aligned_cols=108  Identities=25%  Similarity=0.374  Sum_probs=95.6

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH-HHHHHHHHHhc-CCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-LNQRIQEWKSK-GLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++|+++||||++|||++++++|+++|++|++++|+.+. +++..+++... +.++.++.+|++|+++++++++++.+.+
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            578999999999999999999999999999999998877 77777777654 6778999999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                       |++|+||||||+...           ++.+++|+.|+++++
T Consensus        82 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~  122 (260)
T 1x1t_A           82 -GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGT  122 (260)
T ss_dssp             -SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHH
Confidence             899999999998652           456889999988765

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.89  E-value=3.8e-23  Score=144.18  Aligned_cols=94  Identities=30%  Similarity=0.427  Sum_probs=83.8

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcC-CeEEEEeccCCCH-HHHHHHHHHHHh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-LQVSGNACDLKIR-AQREKLMETVSS   86 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~-~~~~~~~~~~~~   86 (120)
                      .++++|+++||||++|||++++++|+++|++|++++|+....++..+++...+ .++.++.+|++++ ++++++++++.+
T Consensus         8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~   87 (311)
T 3o26_A            8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKT   87 (311)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             ccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999998888888887764 5799999999998 999999999999


Q ss_pred             hcCCcccEEEecCCCCC
Q 033396           87 QFDGKLNILVSSAQLPY  103 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~  103 (120)
                      .+ +++|+||||||+..
T Consensus        88 ~~-g~iD~lv~nAg~~~  103 (311)
T 3o26_A           88 HF-GKLDILVNNAGVAG  103 (311)
T ss_dssp             HH-SSCCEEEECCCCCS
T ss_pred             hC-CCCCEEEECCcccc
Confidence            99 89999999999873

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.89  E-value=4.3e-23  Score=144.23  Aligned_cols=111  Identities=26%  Similarity=0.185  Sum_probs=96.2

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh--HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE--TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      +.+++|+++||||++|||++++++|+++|++|++++++.  ...++..+.+...+.++.++.+|++|+++++++++++.+
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  124 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE  124 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999998873  345566666666788899999999999999999999999


Q ss_pred             hcCCcccEEEecCCCCC------------ccceeeeeccceecccC
Q 033396           87 QFDGKLNILVSSAQLPY------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~------------~~~~~~~n~~g~~~~~~  120 (120)
                      .+ |++|+||||||+..            |.+.+++|+.|+++++|
T Consensus       125 ~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  169 (294)
T 3r3s_A          125 AL-GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQ  169 (294)
T ss_dssp             HH-TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             Hc-CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            99 89999999999854            24668999999987753

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.89  E-value=8.5e-23  Score=141.09  Aligned_cols=111  Identities=24%  Similarity=0.325  Sum_probs=99.2

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      ++++.+|+++||||++|||++++++|+++|++|++++|+....++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus        26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  105 (272)
T 1yb1_A           26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE  105 (272)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999988888888888777778999999999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      + +++|+||||||+...           .+.+++|+.|+++++
T Consensus       106 ~-g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  147 (272)
T 1yb1_A          106 I-GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTT  147 (272)
T ss_dssp             T-CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHH
T ss_pred             C-CCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHH
Confidence            9 899999999998653           356788999887764

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.89  E-value=2.1e-23  Score=144.65  Aligned_cols=110  Identities=27%  Similarity=0.299  Sum_probs=98.4

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++++|+++||||++|||++++++|+++|++|++++|+...+++..+++...+.++..+.+|+++++++.++++++.+. 
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-  107 (275)
T 4imr_A           29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI-  107 (275)
T ss_dssp             HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH-
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh-
Confidence            4589999999999999999999999999999999999988888888888888889999999999999999999998776 


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                       +++|+||||||+...           .+.+++|+.|+++++|
T Consensus       108 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  149 (275)
T 4imr_A          108 -APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQ  149 (275)
T ss_dssp             -SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence             799999999998653           4568899999987753

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.89  E-value=8e-23  Score=140.07  Aligned_cols=106  Identities=24%  Similarity=0.294  Sum_probs=95.1

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      +|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.+ |++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~i   80 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL-GGF   80 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT-TCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CCC
Confidence            5899999999999999999999999999999999888887777777767789999999999999999999999999 899


Q ss_pred             cEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           93 NILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        93 d~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      |+||||||+...           ++.+++|+.|+++++
T Consensus        81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~  118 (256)
T 1geg_A           81 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGI  118 (256)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            999999998652           356889999988765

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.88  E-value=7.4e-23  Score=142.10  Aligned_cols=111  Identities=28%  Similarity=0.386  Sum_probs=96.7

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH-HHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-LNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +++++|+++||||++|||++++++|+++|++|++++|+... .++..+++...+.++.++.+|+++++++.++++++.+.
T Consensus        25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  104 (283)
T 1g0o_A           25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI  104 (283)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999998654 55566667667788999999999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      + +++|+||||||+...           .+.+++|+.|+++++|
T Consensus       105 ~-g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  147 (283)
T 1g0o_A          105 F-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAR  147 (283)
T ss_dssp             H-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             c-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            9 899999999998653           4568899999887753

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.88  E-value=6.7e-23  Score=140.03  Aligned_cols=107  Identities=27%  Similarity=0.373  Sum_probs=92.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ++++|+++||||++|||++++++|+++|++|++++|++ +.+++   .+...+.++.++.+|++|+++++++++++.+.+
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF   80 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999987 65544   344456788999999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                       +++|+||||||+...           ++.+++|+.|+++++|
T Consensus        81 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  122 (249)
T 2ew8_A           81 -GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAK  122 (249)
T ss_dssp             -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence             899999999998652           4567899999887653

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.88  E-value=7.4e-23  Score=141.78  Aligned_cols=110  Identities=23%  Similarity=0.257  Sum_probs=93.7

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      ++++++|+++||||++|||++++++|+++|++|++++|+ +..++..+++...+.++.++.+|++|+++++++. +..+.
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~-~~~~~  103 (273)
T 3uf0_A           26 PFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLADLEGAANVA-EELAA  103 (273)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHH-HHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH-HHHHh
Confidence            456899999999999999999999999999999999965 4556667777777889999999999999999984 44556


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      + +++|+||||||+...           .+.+++|+.|+++++|
T Consensus       104 ~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  146 (273)
T 3uf0_A          104 T-RRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSR  146 (273)
T ss_dssp             H-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             c-CCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHH
Confidence            6 899999999999763           4568999999987753

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.88  E-value=9.9e-23  Score=139.87  Aligned_cols=109  Identities=29%  Similarity=0.339  Sum_probs=94.6

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999988877777777543  33788999999999999999999999


Q ss_pred             hcCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           87 QFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      .+ | +|+||||||+...           .+.+++|+.|+++++
T Consensus        83 ~~-g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~  124 (260)
T 2z1n_A           83 LG-G-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVG  124 (260)
T ss_dssp             TT-C-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHH
T ss_pred             hc-C-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHH
Confidence            99 7 9999999998642           456788998887765

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.88  E-value=2.9e-23  Score=141.95  Aligned_cols=115  Identities=17%  Similarity=0.263  Sum_probs=94.5

Q ss_pred             ccccccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEee-CChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHH
Q 033396            5 REKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCS-RNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMET   83 (120)
Q Consensus         5 ~~~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   83 (120)
                      .......++|+++||||++|||++++++|+++|++|++++ ++....++..+++...+.++.++.+|++|++++++++++
T Consensus         5 ~~~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   84 (256)
T 3ezl_A            5 HHHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDK   84 (256)
T ss_dssp             --------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHH
Confidence            3445668999999999999999999999999999999887 566666667777777788899999999999999999999


Q ss_pred             HHhhcCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           84 VSSQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        84 ~~~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      +.+.+ +++|+||||||+...           ++.+++|+.|+++++|
T Consensus        85 ~~~~~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  131 (256)
T 3ezl_A           85 VKAEV-GEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTK  131 (256)
T ss_dssp             HHHHT-CCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHhc-CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999 899999999998753           4568899999887653

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.88  E-value=4.9e-23  Score=141.53  Aligned_cols=108  Identities=25%  Similarity=0.341  Sum_probs=92.6

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .+++++|+++||||++|||++++++|+++|++|++++|+...+++..+++.   .++.++.+|++|+++++++++++.+.
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~d~~~v~~~~~~~~~~   83 (263)
T 3ak4_A            7 IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE---NGGFAVEVDVTKRASVDAAMQKAIDA   83 (263)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT---TCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh---cCCeEEEEeCCCHHHHHHHHHHHHHH
Confidence            455789999999999999999999999999999999999877665555442   25778899999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      + |++|+||||||+...           .+.+++|+.|+++++
T Consensus        84 ~-g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~  125 (263)
T 3ak4_A           84 L-GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLAN  125 (263)
T ss_dssp             H-TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             c-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHH
Confidence            9 899999999998652           456788999888765

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.88  E-value=1.2e-22  Score=138.38  Aligned_cols=111  Identities=25%  Similarity=0.321  Sum_probs=98.3

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .+++++|+++||||++|||++++++|+++|++|++++|+...+++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus         6 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   85 (255)
T 1fmc_A            6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            45688999999999999999999999999999999999988887777777777778999999999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc----------cceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPYS----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~----------~~~~~~n~~g~~~~~  119 (120)
                      + +++|+||||||+...          .+.+++|+.|+++++
T Consensus        86 ~-~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~  126 (255)
T 1fmc_A           86 L-GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLS  126 (255)
T ss_dssp             H-SSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHH
Confidence            9 899999999998653          355778988887764

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.88  E-value=7.1e-23  Score=145.06  Aligned_cols=110  Identities=14%  Similarity=0.212  Sum_probs=92.7

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC-----hHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN-----ETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETV   84 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (120)
                      ++++|+++||||++|||++++++|+++|++|+++.|+     ...++++.+.+...+.++..+.+|++|++++.++++++
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~   81 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQI   81 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            4678999999999999999999999999999987775     34455566666666788999999999999999999999


Q ss_pred             HhhcCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           85 SSQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        85 ~~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      .+++ |++|+||||||+...           .+.+++|+.|+++++|
T Consensus        82 ~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  127 (324)
T 3u9l_A           82 IGED-GRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNR  127 (324)
T ss_dssp             HHHH-SCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHc-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999 899999999998652           4568999999987753

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.88  E-value=7.6e-23  Score=140.31  Aligned_cols=107  Identities=21%  Similarity=0.311  Sum_probs=94.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH--HHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE--LNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      +|+++||||++|||++++++|+++|++|++++|+...  +++..+++...+.++.++.+|++|+++++++++++.+.+ |
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   80 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKL-G   80 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-T
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence            6899999999999999999999999999999998876  777777777667789999999999999999999999999 8


Q ss_pred             cccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           91 KLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        91 ~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      ++|+||||||+...           .+.+++|+.|+++++|
T Consensus        81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  121 (258)
T 3a28_C           81 GFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQ  121 (258)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHH
Confidence            99999999998652           4568899999887653

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.88  E-value=3.4e-23  Score=142.62  Aligned_cols=107  Identities=20%  Similarity=0.219  Sum_probs=88.3

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +|++++|+++||||++|||++++++|+++|++|++++|+.+...+...+.   +  +.++.+|++++++++++++++.+.
T Consensus        22 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~Dv~~~~~v~~~~~~~~~~   96 (260)
T 3gem_A           22 HMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA---G--AVALYGDFSCETGIMAFIDLLKTQ   96 (260)
T ss_dssp             -----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH---T--CEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc---C--CeEEECCCCCHHHHHHHHHHHHHh
Confidence            46689999999999999999999999999999999999886654433332   3  678899999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc----------cceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPYS----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~----------~~~~~~n~~g~~~~~~  120 (120)
                      + |++|+||||||+...          .+.+++|+.|+++++|
T Consensus        97 ~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  138 (260)
T 3gem_A           97 T-SSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINL  138 (260)
T ss_dssp             C-SCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHH
T ss_pred             c-CCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            9 899999999998652          4578899999887653

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.88  E-value=8.3e-23  Score=140.95  Aligned_cols=109  Identities=20%  Similarity=0.292  Sum_probs=94.4

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEee-CChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCS-RNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ++.+|+++||||++|||++++++|+++|++|++++ ++....++...++...+.++.++.+|++|+++++++++++.+.+
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            47899999999999999999999999999999998 55556666666776677889999999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                       +++|+||||||+...           .+.+++|+.|+++++
T Consensus       102 -g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~  142 (269)
T 3gk3_A          102 -GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVT  142 (269)
T ss_dssp             -SCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHH
T ss_pred             -CCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHH
Confidence             899999999998753           456889999988765

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.88  E-value=9.6e-23  Score=142.23  Aligned_cols=111  Identities=25%  Similarity=0.255  Sum_probs=94.9

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEee-CChHHHHHHHHHHH-hcCCeEEEEeccCCCHH----------
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCS-RNETELNQRIQEWK-SKGLQVSGNACDLKIRA----------   75 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~----------   75 (120)
                      ++++++|+++|||+++|||++++++|+++|++|++++ |+.+.+++..+++. ..+.++.++.+|+++++          
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGS   83 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----C
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccc
Confidence            3457899999999999999999999999999999999 99888888877776 55778999999999999          


Q ss_pred             -------HHHHHHHHHHhhcCCcccEEEecCCCCCc-------------------------cceeeeeccceeccc
Q 033396           76 -------QREKLMETVSSQFDGKLNILVSSAQLPYS-------------------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        76 -------~~~~~~~~~~~~~~g~id~li~~ag~~~~-------------------------~~~~~~n~~g~~~~~  119 (120)
                             ++.++++++.+.+ |++|+||||||+...                         .+.+++|+.|+++++
T Consensus        84 ~~~~~~~~v~~~~~~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  158 (291)
T 1e7w_A           84 APVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLI  158 (291)
T ss_dssp             CCBCHHHHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHH
T ss_pred             cccchHHHHHHHHHHHHHhc-CCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHH
Confidence                   9999999999999 899999999998642                         234678888887765

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.88  E-value=8.5e-23  Score=142.29  Aligned_cols=112  Identities=20%  Similarity=0.241  Sum_probs=93.9

Q ss_pred             Cccccc-ccccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHH
Q 033396            1 MSDFRE-KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREK   79 (120)
Q Consensus         1 ~~~~~~-~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   79 (120)
                      |+.+.. .++++++|+++||||++|||++++++|+++|++|++++|+....++..+++   +.++.++.+|++|++++++
T Consensus         3 m~~~~~~~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~   79 (291)
T 3rd5_A            3 MTGWTAADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM---AGQVEVRELDLQDLSSVRR   79 (291)
T ss_dssp             -CCCCGGGCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS---SSEEEEEECCTTCHHHHHH
T ss_pred             CCCCChhhccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---cCCeeEEEcCCCCHHHHHH
Confidence            555543 345689999999999999999999999999999999999988776665544   6789999999999999988


Q ss_pred             HHHHHHhhcCCcccEEEecCCCCC---------ccceeeeeccceecccC
Q 033396           80 LMETVSSQFDGKLNILVSSAQLPY---------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        80 ~~~~~~~~~~g~id~li~~ag~~~---------~~~~~~~n~~g~~~~~~  120 (120)
                      +++++     +++|+||||||+..         +++.+++|+.|+++++|
T Consensus        80 ~~~~~-----~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  124 (291)
T 3rd5_A           80 FADGV-----SGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTN  124 (291)
T ss_dssp             HHHTC-----CCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHH
T ss_pred             HHHhc-----CCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence            88765     68999999999864         35678999999987753

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.88  E-value=8.7e-23  Score=141.17  Aligned_cols=110  Identities=25%  Similarity=0.340  Sum_probs=93.1

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH---HhcCCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW---KSKGLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   ...+.++.++.+|++|+++++++++++.+
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999988887777777   33356788999999999999999999999


Q ss_pred             hcCCcccEEEecCCCCCc---------------cceeeeeccceecccC
Q 033396           87 QFDGKLNILVSSAQLPYS---------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~~---------------~~~~~~n~~g~~~~~~  120 (120)
                      .+ |++|+||||||+...               ++.+++|+.|+++++|
T Consensus        83 ~~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  130 (278)
T 1spx_A           83 KF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTK  130 (278)
T ss_dssp             HH-SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHH
T ss_pred             Hc-CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHH
Confidence            99 899999999998642               3457889998887653

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.88  E-value=1.5e-22  Score=139.31  Aligned_cols=109  Identities=26%  Similarity=0.288  Sum_probs=95.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++...  +.++.++.+|++|+++++++++++.+.
T Consensus         4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (267)
T 2gdz_A            4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH   83 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999988777766666543  457889999999999999999999999


Q ss_pred             cCCcccEEEecCCCCC---ccceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPY---SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~---~~~~~~~n~~g~~~~~  119 (120)
                      + |++|+||||||+..   +.+.+++|+.|++.++
T Consensus        84 ~-g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~  117 (267)
T 2gdz_A           84 F-GRLDILVNNAGVNNEKNWEKTLQINLVSVISGT  117 (267)
T ss_dssp             H-SCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHH
T ss_pred             c-CCCCEEEECCCCCChhhHHHHHhHHHHHHHHHH
Confidence            9 89999999999865   4667889998887654

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.88  E-value=6e-23  Score=141.85  Aligned_cols=109  Identities=22%  Similarity=0.270  Sum_probs=93.7

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhc-CCeEEEEeccCCCH----HHHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSK-GLQVSGNACDLKIR----AQREKLMET   83 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~----~~~~~~~~~   83 (120)
                      .+++|+++||||++|||++++++|+++|++|++++| +.+.+++..+++... +.++.++.+|++++    +++++++++
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence            368999999999999999999999999999999999 887777777777665 67899999999999    999999999


Q ss_pred             HHhhcCCcccEEEecCCCCCc----------------------cceeeeeccceeccc
Q 033396           84 VSSQFDGKLNILVSSAQLPYS----------------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        84 ~~~~~~g~id~li~~ag~~~~----------------------~~~~~~n~~g~~~~~  119 (120)
                      +.+.+ |++|+||||||+...                      .+.+++|+.|+++++
T Consensus        88 ~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  144 (276)
T 1mxh_A           88 SFRAF-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLI  144 (276)
T ss_dssp             HHHHH-SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHH
T ss_pred             HHHhc-CCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHH
Confidence            99999 899999999998542                      235778888888765

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.88  E-value=2.4e-22  Score=137.55  Aligned_cols=110  Identities=23%  Similarity=0.344  Sum_probs=96.6

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .++++|+++||||++|||++++++|+++|++|++++| +.+..++..+++...+.++.++.+|+++++++.++++++.+.
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (261)
T 1gee_A            3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999 777777777777777788999999999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      + +++|+||||||+...           .+.+++|+.|+++++
T Consensus        83 ~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~  124 (261)
T 1gee_A           83 F-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGS  124 (261)
T ss_dssp             H-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHH
Confidence            9 899999999998653           356788988887654

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.87  E-value=3.5e-22  Score=138.99  Aligned_cols=111  Identities=22%  Similarity=0.240  Sum_probs=93.9

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHH-hcCCeEEEEeccCCC----HHHHHHHH
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWK-SKGLQVSGNACDLKI----RAQREKLM   81 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~D~~~----~~~~~~~~   81 (120)
                      .+++++|+++||||++|||++++++|+++|++|++++|+. +.+++..+++. ..+.++.++.+|+++    ++++++++
T Consensus        18 ~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~   97 (288)
T 2x9g_A           18 GSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEII   97 (288)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHH
Confidence            4568899999999999999999999999999999999998 77777777776 457789999999999    99999999


Q ss_pred             HHHHhhcCCcccEEEecCCCCCcc---------------------ceeeeeccceeccc
Q 033396           82 ETVSSQFDGKLNILVSSAQLPYSQ---------------------RKFFVKSRGPYGSI  119 (120)
Q Consensus        82 ~~~~~~~~g~id~li~~ag~~~~~---------------------~~~~~n~~g~~~~~  119 (120)
                      +++.+.+ |++|+||||||+....                     +.+++|+.|+++++
T Consensus        98 ~~~~~~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  155 (288)
T 2x9g_A           98 NSCFRAF-GRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLT  155 (288)
T ss_dssp             HHHHHHH-SCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHH
T ss_pred             HHHHHhc-CCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHH
Confidence            9999999 8999999999986422                     34678888887764

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.87  E-value=1.9e-22  Score=138.56  Aligned_cols=113  Identities=52%  Similarity=0.860  Sum_probs=97.5

Q ss_pred             ccccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396            7 KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus         7 ~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      ..+.+++|+++||||++|||++++++|+++|++|++++|+...+++..+++...+.++.++.+|++++++++++++++.+
T Consensus         8 ~~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   87 (266)
T 1xq1_A            8 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS   87 (266)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHH
Confidence            34568999999999999999999999999999999999998888888788877777899999999999999999999988


Q ss_pred             hcCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           87 QFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      .+++++|+||||||+...           .+.+++|+.|+++++
T Consensus        88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~  131 (266)
T 1xq1_A           88 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLS  131 (266)
T ss_dssp             HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHH
Confidence            875689999999998652           345788888887764

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.87  E-value=3.6e-23  Score=142.90  Aligned_cols=104  Identities=17%  Similarity=0.215  Sum_probs=88.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+.+|+++||||++|||++++++|+++|++|++++|+.+.+++.      ....+.++.+|++|+++++++++++.+.+ 
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~------~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-   85 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL------NLPNTLCAQVDVTDKYTFDTAITRAEKIY-   85 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT------CCTTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh------hcCCceEEEecCCCHHHHHHHHHHHHHHC-
Confidence            47789999999999999999999999999999999997665432      12368889999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      |++|+||||||+...           ++.+++|+.|+++++|
T Consensus        86 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  127 (266)
T 3p19_A           86 GPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQ  127 (266)
T ss_dssp             CSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            899999999998652           4668999999988653

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.87  E-value=2.1e-22  Score=139.08  Aligned_cols=108  Identities=26%  Similarity=0.281  Sum_probs=96.2

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .++|+++||||++|||++++++|+++|++|+++ .|+.+..++..+++...+.++.++.+|++|+++++++++++.+.+ 
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-  102 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF-  102 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC-
Confidence            468999999999999999999999999999877 777777888888888888899999999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc------------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~------------~~~~~~n~~g~~~~~  119 (120)
                      +++|+||||||+...            .+.+++|+.|+++++
T Consensus       103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  144 (272)
T 4e3z_A          103 GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCA  144 (272)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHH
Confidence            899999999998652            456889999988764

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.87  E-value=1.7e-22  Score=138.24  Aligned_cols=106  Identities=30%  Similarity=0.368  Sum_probs=93.4

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+.+ 
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~-   78 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL-   78 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            367899999999999999999999999999999999988777666665   5678899999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      |++|+||||||+...           .+.+++|+.|++.++
T Consensus        79 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~  119 (253)
T 1hxh_A           79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGC  119 (253)
T ss_dssp             CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHH
Confidence            899999999998652           456789999888764

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.87  E-value=8.5e-23  Score=140.76  Aligned_cols=106  Identities=25%  Similarity=0.318  Sum_probs=92.6

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   ..++.++.+|++|+++++++++++.+.+ 
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~-   78 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEEF-   78 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            367899999999999999999999999999999999987776665544   3578899999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      |++|+||||||+...           ++.+++|+.|+++++
T Consensus        79 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  119 (263)
T 2a4k_A           79 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVA  119 (263)
T ss_dssp             SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            899999999998653           456789999988765

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.87  E-value=2.4e-22  Score=138.15  Aligned_cols=111  Identities=25%  Similarity=0.345  Sum_probs=97.6

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      .+.+++|+++||||++|||++++++|+++|++|++++| +...+++..+++...+.++.++.+|++|+++++++++++.+
T Consensus        16 ~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (274)
T 1ja9_A           16 SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVS   95 (274)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999 77777777777777777899999999999999999999999


Q ss_pred             hcCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           87 QFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      ++ +++|+||||||+..+           ...+++|+.|+++++
T Consensus        96 ~~-~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  138 (274)
T 1ja9_A           96 HF-GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVA  138 (274)
T ss_dssp             HH-SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             Hc-CCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHH
Confidence            99 899999999998753           456788988887764

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.87  E-value=1.4e-22  Score=138.83  Aligned_cols=105  Identities=22%  Similarity=0.345  Sum_probs=92.1

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      +++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++++++++++++++.+.+ |
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   78 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEF-G   78 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHc-C
Confidence            57899999999999999999999999999999999987776665544   4578889999999999999999999999 8


Q ss_pred             cccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           91 KLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        91 ~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      ++|+||||||+...           ++.+++|+.|+++++
T Consensus        79 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~  118 (254)
T 1hdc_A           79 SVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGM  118 (254)
T ss_dssp             CCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHH
Confidence            99999999998652           456889999988654

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.87  E-value=2.6e-22  Score=138.04  Aligned_cols=106  Identities=29%  Similarity=0.332  Sum_probs=92.4

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+..++..+++..   .+.++.+|++|+++++++++++.+++ 
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~-   79 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD---AARYVHLDVTQPAQWKAAVDTAVTAF-   79 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG---GEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---CceEEEecCCCHHHHHHHHHHHHHHc-
Confidence            46899999999999999999999999999999999998777666665532   47889999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      |++|+||||||+...           ++.+++|+.|+++++
T Consensus        80 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~  120 (260)
T 1nff_A           80 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGI  120 (260)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHH
Confidence            899999999998642           456889999988765

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.87  E-value=4.2e-22  Score=137.89  Aligned_cols=109  Identities=27%  Similarity=0.327  Sum_probs=95.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcC--CeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG--LQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .+++|+++||||++|||++++++|+++|++|++++|+...+++..+++...+  ..+.++.+|++|+++++++++++.+.
T Consensus        29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  108 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ  108 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            4889999999999999999999999999999999999888877777777654  57889999999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      + +++|+||||||+...           ...+++|+.|++.++
T Consensus       109 ~-g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~  150 (279)
T 1xg5_A          109 H-SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICT  150 (279)
T ss_dssp             H-CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHH
T ss_pred             C-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHH
Confidence            9 899999999998652           356788998877654

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.87  E-value=3.7e-22  Score=139.27  Aligned_cols=111  Identities=22%  Similarity=0.286  Sum_probs=97.3

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc-CCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      ..++++|+++||||++|||++++++|+++|++|++++|+...+++..+++... +.++.++.+|++|+++++++++++.+
T Consensus        21 ~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (302)
T 1w6u_A           21 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK  100 (302)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            34588999999999999999999999999999999999988887777777655 67899999999999999999999999


Q ss_pred             hcCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           87 QFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      .+ +++|+||||||+...           ...+++|+.|+++++
T Consensus       101 ~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~  143 (302)
T 1w6u_A          101 VA-GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVT  143 (302)
T ss_dssp             HT-CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred             Hc-CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHH
Confidence            99 899999999997542           456788888887764

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.87  E-value=1.6e-22  Score=138.49  Aligned_cols=106  Identities=29%  Similarity=0.400  Sum_probs=91.9

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      +++|+++||||++|||++++++|+++|++|++++|+.+  ++..+++...+.++.++.+|++|+++++++++++.+.+ |
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g   78 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREF-G   78 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHH-S
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHc-C
Confidence            57899999999999999999999999999999999865  34455565557788999999999999999999999999 8


Q ss_pred             cccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           91 KLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        91 ~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      ++|+||||||+...           .+.+++|+.|+++++
T Consensus        79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~  118 (255)
T 2q2v_A           79 GVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGT  118 (255)
T ss_dssp             SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            99999999998652           456889999888765

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.87  E-value=2.1e-22  Score=136.77  Aligned_cols=109  Identities=29%  Similarity=0.444  Sum_probs=91.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ++++|+++|||+++|||++++++|+++|++|+++ +|++..+++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4678999999999999999999999999999998 667667777777777667789999999999999999999999999


Q ss_pred             CCcccEEEecCCCCC-----------ccceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~  119 (120)
                       +++|+||||||+..           +.+.+++|+.|+++++
T Consensus        82 -~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~  122 (247)
T 2hq1_A           82 -GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCT  122 (247)
T ss_dssp             -SCCCEEEECC---------------CHHHHHHTHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHH
Confidence             89999999999864           2456788888887764

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.87  E-value=2.4e-22  Score=140.43  Aligned_cols=110  Identities=16%  Similarity=0.250  Sum_probs=90.9

Q ss_pred             ccccCcEEEEecCC--CchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396            9 WSLKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus         9 ~~~~~~~~litGa~--~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      .++++|+++||||+  +|||++++++|+++|++|++++|++...+ ..+++....+++.++.+|++|+++++++++++.+
T Consensus        27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  105 (293)
T 3grk_A           27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKK-RVEPLAEELGAFVAGHCDVADAASIDAVFETLEK  105 (293)
T ss_dssp             CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHH-HHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHH
Confidence            45899999999999  45999999999999999999999854333 3333333334688999999999999999999999


Q ss_pred             hcCCcccEEEecCCCCC---------------ccceeeeeccceecccC
Q 033396           87 QFDGKLNILVSSAQLPY---------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~---------------~~~~~~~n~~g~~~~~~  120 (120)
                      .+ |++|+||||||+..               +.+.+++|+.|+++++|
T Consensus       106 ~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  153 (293)
T 3grk_A          106 KW-GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSR  153 (293)
T ss_dssp             HT-SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             hc-CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHH
Confidence            99 89999999999874               24568899999887653

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.87  E-value=2.5e-22  Score=136.94  Aligned_cols=109  Identities=24%  Similarity=0.333  Sum_probs=95.8

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN-ETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ++++|+++||||++|||++++++|+++|++|++++|+ ...+++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF   83 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999998 777777777777777889999999999999999999999999


Q ss_pred             CCcccEEEecCCC-CC-----------ccceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQL-PY-----------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~-~~-----------~~~~~~~n~~g~~~~~  119 (120)
                       +++|+||||||+ ..           +.+.+++|+.|+++++
T Consensus        84 -g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  125 (258)
T 3afn_B           84 -GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTT  125 (258)
T ss_dssp             -SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             -CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHH
Confidence             899999999997 32           2356788998887654

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.87  E-value=1.7e-22  Score=137.81  Aligned_cols=104  Identities=25%  Similarity=0.319  Sum_probs=90.2

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +  +.++.+|++|+++++++++++.+.+ 
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~D~~~~~~~~~~~~~~~~~~-   75 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---G--AHPVVMDVADPASVERGFAEALAHL-   75 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---T--CEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C--CEEEEecCCCHHHHHHHHHHHHHHc-
Confidence            467899999999999999999999999999999999987766555443   3  6788999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      |++|+||||||+...           ++.+++|+.|+++++
T Consensus        76 g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  116 (245)
T 1uls_A           76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVA  116 (245)
T ss_dssp             SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHH
Confidence            899999999998652           456789999988765

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.87  E-value=3.3e-22  Score=135.73  Aligned_cols=110  Identities=25%  Similarity=0.362  Sum_probs=96.0

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh-cCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.. .+.++.++.+|++|+++++++++++.+.
T Consensus         3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (248)
T 2pnf_A            3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL   82 (248)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            347899999999999999999999999999999999998877777776655 3667899999999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      + +++|+||||||+...           .+.+++|+.|+++++
T Consensus        83 ~-~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~  124 (248)
T 2pnf_A           83 V-DGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVT  124 (248)
T ss_dssp             S-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHH
Confidence            9 899999999998653           356788999887654

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.87  E-value=4.1e-22  Score=138.47  Aligned_cols=110  Identities=23%  Similarity=0.305  Sum_probs=97.8

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  119 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH  119 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence            45789999999999999999999999999999999999888877777787777789999999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                       +++|+||||||+...           .+.+++|+.|+++++
T Consensus       120 -~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  160 (285)
T 2c07_A          120 -KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYIT  160 (285)
T ss_dssp             -SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHH
Confidence             899999999998652           356789999988765

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.87  E-value=5.2e-22  Score=138.67  Aligned_cols=109  Identities=28%  Similarity=0.447  Sum_probs=96.6

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh-----cCCeEEEEeccCCCHHHHHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-----KGLQVSGNACDLKIRAQREKLMETV   84 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~   84 (120)
                      .+++|+++||||++|||++++++|+++|++|++++|+...+++..+++..     .+.++.++.+|++++++++++++++
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   94 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   94 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH
Confidence            47899999999999999999999999999999999998888777777765     3678999999999999999999999


Q ss_pred             HhhcCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           85 SSQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        85 ~~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      .+.+ +++|+||||||+...           .+.+++|+.|+++++
T Consensus        95 ~~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  139 (303)
T 1yxm_A           95 LDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMC  139 (303)
T ss_dssp             HHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             HHHc-CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHH
Confidence            9999 899999999997542           455789999988765

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.87  E-value=2.2e-22  Score=138.73  Aligned_cols=108  Identities=30%  Similarity=0.372  Sum_probs=93.0

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCHHHHHHHHHHHH
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      .+.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...  +..+..+.+|++++++++++++   
T Consensus         5 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~---   81 (267)
T 3t4x_A            5 HMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE---   81 (267)
T ss_dssp             CCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH---
T ss_pred             ccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH---
Confidence            35689999999999999999999999999999999999998888888888765  4678899999999998877765   


Q ss_pred             hhcCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           86 SQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                       ++ +++|+||||||+...           .+.+++|+.|+++++|
T Consensus        82 -~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  125 (267)
T 3t4x_A           82 -KY-PKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTR  125 (267)
T ss_dssp             -HC-CCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             -hc-CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHH
Confidence             45 899999999998753           4558999999887753

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.87  E-value=7.9e-23  Score=140.56  Aligned_cols=111  Identities=23%  Similarity=0.416  Sum_probs=95.6

Q ss_pred             ccccCcEEEEecCC--CchHHHHHHHHHHCCCEEEEeeCChHHH-HHHHHHHHh-cCCeEEEEeccCCCHHHHHHHHHHH
Q 033396            9 WSLKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETEL-NQRIQEWKS-KGLQVSGNACDLKIRAQREKLMETV   84 (120)
Q Consensus         9 ~~~~~~~~litGa~--~~ig~~~a~~l~~~g~~v~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~   84 (120)
                      +++++|+++||||+  +|||++++++|+++|++|++++++.... ++..+++.. .+.++.++.+|++|+++++++++++
T Consensus        16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   95 (267)
T 3gdg_A           16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDV   95 (267)
T ss_dssp             HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHH
T ss_pred             cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHH
Confidence            46899999999999  9999999999999999999998876543 555666654 3788999999999999999999999


Q ss_pred             HhhcCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           85 SSQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        85 ~~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      .+.+ +++|+||||||+...           .+.+++|+.|+++++|
T Consensus        96 ~~~~-g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  141 (267)
T 3gdg_A           96 VADF-GQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAK  141 (267)
T ss_dssp             HHHT-SCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHc-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHH
Confidence            9999 899999999998763           4568899999887653

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.87  E-value=3.4e-22  Score=139.78  Aligned_cols=111  Identities=14%  Similarity=0.177  Sum_probs=92.0

Q ss_pred             cccccCcEEEEecCCC--chHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHH
Q 033396            8 RWSLKGMTALVTGGTK--GIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus         8 ~~~~~~~~~litGa~~--~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      ++++++|+++||||++  |||++++++|+++|++|++++|+....+...+.....+ .+.++.+|++|+++++++++++.
T Consensus        25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~  103 (296)
T 3k31_A           25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG-VKLTVPCDVSDAESVDNMFKVLA  103 (296)
T ss_dssp             CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT-CCEEEECCTTCHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHHHHH
Confidence            3568999999999987  99999999999999999999998754443333333333 46889999999999999999999


Q ss_pred             hhcCCcccEEEecCCCCC---------------ccceeeeeccceecccC
Q 033396           86 SQFDGKLNILVSSAQLPY---------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~---------------~~~~~~~n~~g~~~~~~  120 (120)
                      +++ |++|+||||||+..               |.+.+++|+.|+++++|
T Consensus       104 ~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  152 (296)
T 3k31_A          104 EEW-GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIAS  152 (296)
T ss_dssp             HHH-SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHc-CCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHH
Confidence            999 89999999999874               24668899999887653

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.87  E-value=3.5e-22  Score=137.59  Aligned_cols=109  Identities=24%  Similarity=0.265  Sum_probs=95.2

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .+.+|+++||||++|||++++++|+++|++|++. .|+....++..+++...+.++.++.+|++|++++.++++++.+.+
T Consensus        23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  102 (267)
T 4iiu_A           23 NAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQH  102 (267)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            4688999999999999999999999999998664 567777888888888888899999999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                       +++|+||||||+...           .+.+++|+.|+++++
T Consensus       103 -g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  143 (267)
T 4iiu_A          103 -GAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVI  143 (267)
T ss_dssp             -CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             -CCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHH
Confidence             899999999998763           456789999888764

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.87  E-value=3.3e-22  Score=138.22  Aligned_cols=107  Identities=24%  Similarity=0.353  Sum_probs=92.3

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ..+++|+++||||++|||++++++|+++|++|++++|++..+++..+++.    .+.++.+|++|+++++++++++.+.+
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~~~   80 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP----GAVFILCDVTQEDDVKTLVSETIRRF   80 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT----TEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCeEEEcCCCCHHHHHHHHHHHHHHc
Confidence            34789999999999999999999999999999999999877766555442    37889999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc------------cceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPYS------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~~------------~~~~~~n~~g~~~~~~  120 (120)
                       |++|+||||||+...            ++.+++|+.|+++++|
T Consensus        81 -g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  123 (270)
T 1yde_A           81 -GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTK  123 (270)
T ss_dssp             -SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence             899999999998642            4567899999887653

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.87  E-value=2.4e-22  Score=139.17  Aligned_cols=108  Identities=23%  Similarity=0.264  Sum_probs=93.2

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .++ |+++||||++|||++++++|+++|++|++++|+.+.+++..+++... .++.++.+|++|+++++++++++.+.+ 
T Consensus        19 ~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~-   95 (272)
T 2nwq_A           19 HMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEF-   95 (272)
T ss_dssp             --C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGGG-
T ss_pred             CcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHh-
Confidence            456 99999999999999999999999999999999988887777776544 578899999999999999999999999 


Q ss_pred             CcccEEEecCCCCC------------ccceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPY------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~------------~~~~~~~n~~g~~~~~~  120 (120)
                      |++|+||||||+..            +.+.+++|+.|+++++|
T Consensus        96 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  138 (272)
T 2nwq_A           96 ATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTR  138 (272)
T ss_dssp             SSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence            89999999999854            24568899999887653

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.87  E-value=3.7e-22  Score=136.81  Aligned_cols=103  Identities=25%  Similarity=0.396  Sum_probs=89.5

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+. ++..+++.    . .++.+|++|+++++++++++.+.+ 
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~~~-   75 (256)
T 2d1y_A            3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG----G-AFFQVDLEDERERVRFVEEAAYAL-   75 (256)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHHHc-
Confidence            4679999999999999999999999999999999998766 55555553    3 678999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      |++|+||||||+...           .+.+++|+.|+++++
T Consensus        76 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~  116 (256)
T 2d1y_A           76 GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLS  116 (256)
T ss_dssp             SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            899999999998653           456789999988765

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.87  E-value=2.8e-22  Score=137.31  Aligned_cols=109  Identities=26%  Similarity=0.356  Sum_probs=92.0

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcC-------CeEEEEeccCCCHHHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-------LQVSGNACDLKIRAQREKLME   82 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~   82 (120)
                      ++++|+++||||++|||++++++|+++|++|++++|+....++..+++...+       .++.++.+|++|+++++++++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   83 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE   83 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence            4678999999999999999999999999999999999887776666655444       578899999999999999999


Q ss_pred             HHHhhcCCcc-cEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           83 TVSSQFDGKL-NILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        83 ~~~~~~~g~i-d~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      ++.+.+ +++ |+||||||+...           .+.+++|+.|+++++
T Consensus        84 ~~~~~~-g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  131 (264)
T 2pd6_A           84 QVQACF-SRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVT  131 (264)
T ss_dssp             HHHHHH-SSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             HHHHHh-CCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHH
Confidence            999999 888 999999998653           356788999888765

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.87  E-value=1.3e-21  Score=134.06  Aligned_cols=111  Identities=23%  Similarity=0.352  Sum_probs=93.3

Q ss_pred             ccccccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHH
Q 033396            5 REKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETV   84 (120)
Q Consensus         5 ~~~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (120)
                      ..+.+++++|+++||||++|||++++++|+++|++|++++|+...+++..+++   +.++.++.+|++|+++++++++++
T Consensus         4 ~~~~~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~   80 (265)
T 2o23_A            4 AAACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALA   80 (265)
T ss_dssp             ----CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccccCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHH
Confidence            33456689999999999999999999999999999999999987776666555   567899999999999999999999


Q ss_pred             HhhcCCcccEEEecCCCCCc-----------------cceeeeeccceeccc
Q 033396           85 SSQFDGKLNILVSSAQLPYS-----------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        85 ~~~~~g~id~li~~ag~~~~-----------------~~~~~~n~~g~~~~~  119 (120)
                      .+.+ +++|+||||||+...                 .+.+++|+.|+++++
T Consensus        81 ~~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~  131 (265)
T 2o23_A           81 KGKF-GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVI  131 (265)
T ss_dssp             HHHH-SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHH
T ss_pred             HHHC-CCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHH
Confidence            9999 899999999998643                 345678888887765

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.86  E-value=2.8e-22  Score=137.59  Aligned_cols=108  Identities=30%  Similarity=0.369  Sum_probs=93.6

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh-cC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ-FD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   89 (120)
                      +++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+. + 
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~-   81 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ-   81 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT-
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC-
Confidence            57899999999999999999999999999999999988887777777766778999999999999999999999886 7 


Q ss_pred             CcccEEEecCC--CC-------C---------ccceeeeeccceeccc
Q 033396           90 GKLNILVSSAQ--LP-------Y---------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag--~~-------~---------~~~~~~~n~~g~~~~~  119 (120)
                      |++|+||||||  +.       .         |.+.+++|+.|+++++
T Consensus        82 g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  129 (260)
T 2qq5_A           82 GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCS  129 (260)
T ss_dssp             TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHH
T ss_pred             CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHH
Confidence            89999999995  32       1         2456788888887654

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.86  E-value=6.5e-22  Score=140.25  Aligned_cols=108  Identities=26%  Similarity=0.274  Sum_probs=94.6

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEee-CChHHHHHHHHHHH-hcCCeEEEEeccCCCHH-------------
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCS-RNETELNQRIQEWK-SKGLQVSGNACDLKIRA-------------   75 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~-------------   75 (120)
                      +++|+++||||++|||++++++|+++|++|++++ |+.+.+++..+++. ..+.++.++.+|+++++             
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~  123 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV  123 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence            7899999999999999999999999999999999 99888887777776 45778999999999999             


Q ss_pred             ----HHHHHHHHHHhhcCCcccEEEecCCCCCc-------------------------cceeeeeccceeccc
Q 033396           76 ----QREKLMETVSSQFDGKLNILVSSAQLPYS-------------------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        76 ----~~~~~~~~~~~~~~g~id~li~~ag~~~~-------------------------~~~~~~n~~g~~~~~  119 (120)
                          +++++++++.+.+ |++|+||||||+...                         ...+++|+.|+++++
T Consensus       124 ~~~~~v~~~~~~~~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~  195 (328)
T 2qhx_A          124 TLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLI  195 (328)
T ss_dssp             CHHHHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHhc-CCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence                9999999999999 899999999998642                         234678888888765

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.86  E-value=6.8e-22  Score=134.72  Aligned_cols=108  Identities=25%  Similarity=0.320  Sum_probs=92.4

Q ss_pred             ccccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeE-EEEeccCCCHHHHHHHHHHHH
Q 033396            7 KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQV-SGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus         7 ~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      +++++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++ .++.+|++|+++++++++++.
T Consensus         5 ~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (254)
T 2wsb_A            5 TVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---GAAVAARIVADVTDAEAMTAAAAEAE   81 (254)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cccceeEEEEecCCHHHHHHHHHHHH
Confidence            345689999999999999999999999999999999999988777666655   3456 789999999999999999998


Q ss_pred             hhcCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           86 SQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      + + +++|+||||||+...           .+.+++|+.|+++++
T Consensus        82 ~-~-~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~  124 (254)
T 2wsb_A           82 A-V-APVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWAS  124 (254)
T ss_dssp             H-H-SCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHH
T ss_pred             h-h-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHH
Confidence            8 8 899999999998653           355778998887664

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.86  E-value=8.4e-22  Score=135.83  Aligned_cols=110  Identities=21%  Similarity=0.295  Sum_probs=93.9

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .+.+++|+++||||++|||++++++|+++|++|++++|+....++..+++.. ..++.++.+|++|+++++++++++.+.
T Consensus        11 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   89 (278)
T 2bgk_A           11 TNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLVDTTIAK   89 (278)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC-CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            3557899999999999999999999999999999999998776666665533 237889999999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc-------------cceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPYS-------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-------------~~~~~~n~~g~~~~~  119 (120)
                      + +++|+||||||+...             .+.+++|+.|+++++
T Consensus        90 ~-~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  133 (278)
T 2bgk_A           90 H-GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVA  133 (278)
T ss_dssp             H-SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHH
T ss_pred             c-CCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHH
Confidence            9 899999999998642             356788998888765

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.86  E-value=2.7e-22  Score=138.92  Aligned_cols=107  Identities=21%  Similarity=0.295  Sum_probs=91.8

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++.+|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +..+.++.+|++|+++++++++++.+.+ 
T Consensus         2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-   77 (281)
T 3m1a_A            2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY---PDRAEAISLDVTDGERIDVVAADVLARY-   77 (281)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC---TTTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCCceEEEeeCCCHHHHHHHHHHHHHhC-
Confidence            356899999999999999999999999999999999987776655443   5678999999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      +++|+||||||+...           ...+++|+.|+++++|
T Consensus        78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  119 (281)
T 3m1a_A           78 GRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTR  119 (281)
T ss_dssp             SCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHH
Confidence            899999999998642           4568899999887653

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.86  E-value=8e-22  Score=136.59  Aligned_cols=107  Identities=21%  Similarity=0.238  Sum_probs=92.6

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      ++++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++++++++++++++ +.
T Consensus        25 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~-~~  100 (281)
T 3ppi_A           25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEAA-NQ  100 (281)
T ss_dssp             CGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHH-TT
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHH-HH
Confidence            35689999999999999999999999999999999999998887777766   667899999999999999999999 77


Q ss_pred             cCCcccEEEec-CCCCC----------------ccceeeeeccceeccc
Q 033396           88 FDGKLNILVSS-AQLPY----------------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~-ag~~~----------------~~~~~~~n~~g~~~~~  119 (120)
                      + +++|++||| +|+..                +.+.+++|+.|+++++
T Consensus       101 ~-~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  148 (281)
T 3ppi_A          101 L-GRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVA  148 (281)
T ss_dssp             S-SEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHH
T ss_pred             h-CCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHH
Confidence            8 899999999 65533                2455788888887764

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.86  E-value=7.4e-22  Score=134.32  Aligned_cols=108  Identities=24%  Similarity=0.314  Sum_probs=93.4

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... .++.++.+|++|+++++++++++.+.+ 
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~-   80 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP-DQIQFFQHDSSDEDGWTKLFDATEKAF-   80 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc-CceEEEECCCCCHHHHHHHHHHHHHHh-
Confidence            467899999999999999999999999999999999988777666665433 578899999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +++|+||||||+...           .+.+++|+.|+++++
T Consensus        81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~  121 (251)
T 1zk4_A           81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGT  121 (251)
T ss_dssp             SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHH
Confidence            899999999998642           456788998887654

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.86  E-value=4.7e-22  Score=137.44  Aligned_cols=110  Identities=26%  Similarity=0.400  Sum_probs=94.4

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++++|+++||||++|||++++++|+++|++|++++|+....++..+.+...+.++.++.+|++|+++++++++++.+.+
T Consensus        30 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  109 (279)
T 3ctm_A           30 FSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDF  109 (279)
T ss_dssp             GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            45899999999999999999999999999999999998766666666665557788999999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc-------------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-------------~~~~~~n~~g~~~~~  119 (120)
                       +++|+||||||+...             .+.+++|+.|++.++
T Consensus       110 -g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~  152 (279)
T 3ctm_A          110 -GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCS  152 (279)
T ss_dssp             -SCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHH
T ss_pred             -CCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHH
Confidence             899999999997643             235678888877654

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.86  E-value=9.8e-22  Score=135.14  Aligned_cols=110  Identities=15%  Similarity=0.153  Sum_probs=91.5

Q ss_pred             ccccCcEEEEecCC--CchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCC-eEEEEeccCCCHHHHHHHHHHHH
Q 033396            9 WSLKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL-QVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus         9 ~~~~~~~~litGa~--~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      +++++|+++||||+  +|||++++++|+++|++|++++|+....+...+.....+. ++.++.+|++|+++++++++++.
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIK   82 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence            45889999999999  6699999999999999999999986554444444444443 78999999999999999999999


Q ss_pred             hhcCCcccEEEecCCCCCc---------------cceeeeeccceeccc
Q 033396           86 SQFDGKLNILVSSAQLPYS---------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~~---------------~~~~~~n~~g~~~~~  119 (120)
                      +.+ +++|+||||||+...               ...+++|+.|++.++
T Consensus        83 ~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  130 (266)
T 3oig_A           83 EQV-GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVV  130 (266)
T ss_dssp             HHH-SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             HHh-CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHH
Confidence            999 899999999998751               355788888887764

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.86  E-value=1.1e-21  Score=133.14  Aligned_cols=106  Identities=22%  Similarity=0.312  Sum_probs=94.7

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCC-------EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHH
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGA-------IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~-------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      +|+++||||++|||++++++|+++|+       +|++++|+...++...+++...+.++.++.+|++++++++++++++.
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            68999999999999999999999999       99999999888887777777767889999999999999999999999


Q ss_pred             hhcCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           86 SQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +.+ +++|+||||||+...           .+.+++|+.|+++++
T Consensus        82 ~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  125 (244)
T 2bd0_A           82 ERY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLT  125 (244)
T ss_dssp             HHT-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             HhC-CCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHH
Confidence            999 899999999998653           355788998887765

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.86  E-value=5.6e-22  Score=136.12  Aligned_cols=110  Identities=23%  Similarity=0.262  Sum_probs=91.2

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH-HHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-LNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ...+|+++||||++|||++++++|+++|++|++++++... .+...+.+...+.++.++.+|++|+++++++++++.+.+
T Consensus         4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   83 (264)
T 3i4f_A            4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHF   83 (264)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            3457999999999999999999999999999999776544 444555555557789999999999999999999999999


Q ss_pred             CCcccEEEecCCC--CC-----------ccceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQL--PY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~--~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                       +++|+||||||+  ..           +.+.+++|+.|+++++|
T Consensus        84 -g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  127 (264)
T 3i4f_A           84 -GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLK  127 (264)
T ss_dssp             -SCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             -CCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHH
Confidence             899999999994  22           24568899999887653

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.86  E-value=7.1e-22  Score=135.26  Aligned_cols=111  Identities=23%  Similarity=0.339  Sum_probs=93.5

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh-cCCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KGLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.....+..+++.. .+.++.++.+|++|+++++++++++.+
T Consensus         9 ~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   88 (265)
T 1h5q_A            9 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDA   88 (265)
T ss_dssp             EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHH
Confidence            3458899999999999999999999999999999999976555444555543 366789999999999999999999999


Q ss_pred             hcCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           87 QFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      .+ +++|+||||||+...           .+.+++|+.|+++++
T Consensus        89 ~~-~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~  131 (265)
T 1h5q_A           89 DL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTC  131 (265)
T ss_dssp             HS-CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             hc-CCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHH
Confidence            99 899999999998653           345788998887764

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.86  E-value=9.7e-22  Score=134.80  Aligned_cols=108  Identities=26%  Similarity=0.358  Sum_probs=95.5

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHH-CCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAA-FGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .++|+++||||++|||++++++|++ .|++|++++|+....++..+++...+.++.++.+|++++++++++++++.+.+ 
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   80 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-   80 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc-
Confidence            4689999999999999999999999 99999999999888877777787767788999999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +++|+||||||+...           ...+++|+.|+++++
T Consensus        81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  121 (276)
T 1wma_A           81 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVC  121 (276)
T ss_dssp             SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHH
T ss_pred             CCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHH
Confidence            899999999998642           345788988887764

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.86  E-value=1.8e-21  Score=135.17  Aligned_cols=110  Identities=21%  Similarity=0.228  Sum_probs=95.4

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcC-CeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-LQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .++++|+++||||++|||++++++|+++|++|++++|+...+++..+++...+ .++.++.+|++|+++++++++++.+.
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  103 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL  103 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence            34789999999999999999999999999999999999988887777776655 47899999999999999999999999


Q ss_pred             cCCcccEEEec-CCCCCc----------cceeeeeccceeccc
Q 033396           88 FDGKLNILVSS-AQLPYS----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~-ag~~~~----------~~~~~~n~~g~~~~~  119 (120)
                      + |++|+|||| +|+...          .+.+++|+.|+++++
T Consensus       104 ~-g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~  145 (286)
T 1xu9_A          104 M-GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLT  145 (286)
T ss_dssp             H-TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHH
T ss_pred             c-CCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHH
Confidence            9 899999999 676542          455788998887764

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.86  E-value=1e-21  Score=134.71  Aligned_cols=110  Identities=23%  Similarity=0.295  Sum_probs=95.1

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHH---CCCEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCHHHHHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAA---FGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIRAQREKLMETV   84 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~---~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   84 (120)
                      .+++|+++||||++|||++++++|++   +|++|++++|+.+.+++..+++...  +.++.++.+|++++++++++++++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence            46799999999999999999999999   8999999999998888887777654  678999999999999999999999


Q ss_pred             Hh--hcCCccc--EEEecCCCCCc--------------cceeeeeccceecccC
Q 033396           85 SS--QFDGKLN--ILVSSAQLPYS--------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        85 ~~--~~~g~id--~li~~ag~~~~--------------~~~~~~n~~g~~~~~~  120 (120)
                      .+  .+ |++|  +||||||+...              .+.+++|+.|+++++|
T Consensus        83 ~~~~~~-g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  135 (259)
T 1oaa_A           83 RELPRP-EGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTS  135 (259)
T ss_dssp             HHSCCC-TTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             Hhcccc-ccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHH
Confidence            88  66 7888  99999998521              3457889999887653

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.86  E-value=8.7e-22  Score=135.30  Aligned_cols=111  Identities=19%  Similarity=0.154  Sum_probs=91.5

Q ss_pred             ccccccCcEEEEecCC--CchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHH
Q 033396            7 KRWSLKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETV   84 (120)
Q Consensus         7 ~~~~~~~~~~litGa~--~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (120)
                      ....+++|+++||||+  +|||++++++|+++|++|++++|+.... +..+++....+.+.++.+|++|+++++++++++
T Consensus         8 ~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   86 (271)
T 3ek2_A            8 HMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK-DRITEFAAEFGSELVFPCDVADDAQIDALFASL   86 (271)
T ss_dssp             -CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHH
T ss_pred             CccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhH-HHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHH
Confidence            4456899999999998  9999999999999999999999985433 333444333445889999999999999999999


Q ss_pred             HhhcCCcccEEEecCCCCCc----------------cceeeeeccceeccc
Q 033396           85 SSQFDGKLNILVSSAQLPYS----------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        85 ~~~~~g~id~li~~ag~~~~----------------~~~~~~n~~g~~~~~  119 (120)
                      .+++ +++|+||||||+...                ...+++|+.|+++++
T Consensus        87 ~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  136 (271)
T 3ek2_A           87 KTHW-DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALA  136 (271)
T ss_dssp             HHHC-SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHH
T ss_pred             HHHc-CCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHH
Confidence            9999 899999999998642                345788888887765

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.86  E-value=1.4e-21  Score=132.54  Aligned_cols=106  Identities=21%  Similarity=0.297  Sum_probs=93.1

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      +|+++||||++|||++++++|+++|++|+++ +|+....++..+++...+.++.++.+|++++++++++++++.+.+ ++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~   79 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW-GT   79 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS-SC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHc-CC
Confidence            5789999999999999999999999999984 888877777777776667789999999999999999999999999 89


Q ss_pred             ccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           92 LNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        92 id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +|+||||||+...           .+.+++|+.|+++++
T Consensus        80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  118 (244)
T 1edo_A           80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCT  118 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             CCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHH
Confidence            9999999998653           346788999887765

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.86  E-value=1.9e-22  Score=138.85  Aligned_cols=103  Identities=17%  Similarity=0.238  Sum_probs=89.4

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      ++.+++|+++||||++|||++++++|+++|++|++++|+.....         ...+.++.+|++|+++++++++++.++
T Consensus        23 m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dv~d~~~v~~~~~~~~~~   93 (260)
T 3un1_A           23 MMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA---------DPDIHTVAGDISKPETADRIVREGIER   93 (260)
T ss_dssp             HHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS---------STTEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             hhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc---------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            35578999999999999999999999999999999999864321         236889999999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      + |++|+||||||+...           .+.+++|+.|+++++|
T Consensus        94 ~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  136 (260)
T 3un1_A           94 F-GRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQ  136 (260)
T ss_dssp             H-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             C-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            9 899999999998752           4567899999887753

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.85  E-value=1e-21  Score=136.43  Aligned_cols=107  Identities=20%  Similarity=0.264  Sum_probs=89.8

Q ss_pred             ccCcEEEEecCC--CchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           11 LKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        11 ~~~~~~litGa~--~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++|+++||||+  +|||++++++|+++|++|++++|+.. .++..+++....+.+.++.+|++|+++++++++++.+.+
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   97 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENW   97 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            789999999999  99999999999999999999999874 334444454432346788999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc---------------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS---------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~---------------~~~~~~n~~g~~~~~  119 (120)
                       |++|+||||||+...               .+.+++|+.|+++++
T Consensus        98 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  142 (285)
T 2p91_A           98 -GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALT  142 (285)
T ss_dssp             -SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             -CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHH
Confidence             899999999998642               356789999988765

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.85  E-value=4.2e-22  Score=137.66  Aligned_cols=104  Identities=27%  Similarity=0.374  Sum_probs=87.4

Q ss_pred             cccccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHH
Q 033396            6 EKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus         6 ~~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      +...++++|++|||||++|||++++++|+++|++|++++|+....          ...+..+.+|++|+++++++++++.
T Consensus         7 ~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~   76 (269)
T 3vtz_A            7 HHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD----------VNVSDHFKIDVTNEEEVKEAVEKTT   76 (269)
T ss_dssp             ---CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C----------TTSSEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc----------cCceeEEEecCCCHHHHHHHHHHHH
Confidence            344568999999999999999999999999999999999987543          1245678999999999999999999


Q ss_pred             hhcCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           86 SQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      +.+ |++|+||||||+...           .+.+++|+.|+++++|
T Consensus        77 ~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  121 (269)
T 3vtz_A           77 KKY-GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAK  121 (269)
T ss_dssp             HHH-SCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHc-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            999 899999999998653           4567899999987753

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.85  E-value=1.1e-21  Score=133.77  Aligned_cols=111  Identities=29%  Similarity=0.422  Sum_probs=95.2

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ++++|+++||||++|||++++++|+++|++|+++ .++.+..++...++...+.++.++.+|+++.++++++++++.+.+
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL   83 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence            4789999999999999999999999999999885 667777888888888888899999999999999999999888766


Q ss_pred             C-----CcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           89 D-----GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~-----g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      +     +++|+||||||+...           ++.+++|+.|+++++|
T Consensus        84 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  131 (255)
T 3icc_A           84 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQ  131 (255)
T ss_dssp             HHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHH
Confidence            1     249999999998653           4557899999887653

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.85  E-value=2.9e-21  Score=131.36  Aligned_cols=106  Identities=21%  Similarity=0.291  Sum_probs=92.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH-HhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW-KSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      +|+++||||++|||++++++|+++|++|++++|+...+++..+++ ...+.++.++.+|++|+++++++++++.+.+ ++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   80 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQF-GA   80 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHH-SC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CC
Confidence            689999999999999999999999999999999988877777776 4446678999999999999999999999999 89


Q ss_pred             ccEEEecCCCCCc--------------cceeeeeccceeccc
Q 033396           92 LNILVSSAQLPYS--------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        92 id~li~~ag~~~~--------------~~~~~~n~~g~~~~~  119 (120)
                      +|+||||||+...              .+.+++|+.|++.++
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  122 (250)
T 2cfc_A           81 IDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGC  122 (250)
T ss_dssp             CCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHH
Confidence            9999999998542              345688888887654

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.85  E-value=8.7e-22  Score=135.49  Aligned_cols=108  Identities=19%  Similarity=0.234  Sum_probs=89.1

Q ss_pred             ccCcEEEEecCC--CchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           11 LKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        11 ~~~~~~litGa~--~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++|+++||||+  +|||++++++|+++|++|++++|+. ..++..+++....+...++.+|++|+++++++++++.+.+
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   85 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHc
Confidence            789999999999  9999999999999999999999987 3334444444332334788999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc----------------cceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPYS----------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~~----------------~~~~~~n~~g~~~~~~  120 (120)
                       +++|+||||||+...                .+.+++|+.|+++++|
T Consensus        86 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  132 (265)
T 1qsg_A           86 -PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAK  132 (265)
T ss_dssp             -SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHH
Confidence             899999999998642                3457889998887653

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.85  E-value=1.4e-21  Score=135.54  Aligned_cols=109  Identities=16%  Similarity=0.160  Sum_probs=91.4

Q ss_pred             cccccCcEEEEecCC--CchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHH
Q 033396            8 RWSLKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus         8 ~~~~~~~~~litGa~--~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      |.++++|+++||||+  +|||++++++|+++|++|++++|+.  .++..+++.....++.++.+|++++++++++++++.
T Consensus        21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   98 (280)
T 3nrc_A           21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELG   98 (280)
T ss_dssp             -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHH
Confidence            345889999999988  7799999999999999999999987  334445555555568899999999999999999999


Q ss_pred             hhcCCcccEEEecCCCCCc----------------cceeeeeccceeccc
Q 033396           86 SQFDGKLNILVSSAQLPYS----------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~~----------------~~~~~~n~~g~~~~~  119 (120)
                      +.+ +++|+||||||+...                .+.+++|+.|+++++
T Consensus        99 ~~~-g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~  147 (280)
T 3nrc_A           99 KVW-DGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALA  147 (280)
T ss_dssp             HHC-SSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHH
T ss_pred             HHc-CCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHH
Confidence            999 899999999998642                345788988888765

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.85  E-value=1e-21  Score=134.54  Aligned_cols=104  Identities=21%  Similarity=0.294  Sum_probs=91.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      +|+++||||++|||++++++|+++|  +.|++++|+.+.++++.+++   +.++.++.+|++|+++++++++++.+.+ |
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   77 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGH-G   77 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHH-S
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhc-C
Confidence            6899999999999999999999985  78999999988877766655   5678999999999999999999999999 8


Q ss_pred             cccEEEecCCCCC------------ccceeeeeccceecccC
Q 033396           91 KLNILVSSAQLPY------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        91 ~id~li~~ag~~~------------~~~~~~~n~~g~~~~~~  120 (120)
                      ++|+||||||+..            |.+.+++|+.|+++++|
T Consensus        78 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  119 (254)
T 3kzv_A           78 KIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVG  119 (254)
T ss_dssp             CCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            9999999999853            24568999999988753

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.85  E-value=1.1e-21  Score=135.65  Aligned_cols=108  Identities=19%  Similarity=0.246  Sum_probs=90.0

Q ss_pred             ccCcEEEEecCC--CchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           11 LKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        11 ~~~~~~litGa~--~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++|+++||||+  +|||++++++|+++|++|++++|+.. .++..+++....+.+.++.+|++|+++++++++++.+.+
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   82 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            678999999999  99999999999999999999999875 334444454432347889999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc---------------cceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPYS---------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~~---------------~~~~~~n~~g~~~~~~  120 (120)
                       |++|+||||||+...               .+.+++|+.|+++++|
T Consensus        83 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  128 (275)
T 2pd4_A           83 -GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTN  128 (275)
T ss_dssp             -SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             -CCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence             899999999998642               3567889999887653

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.85  E-value=1.1e-21  Score=134.19  Aligned_cols=103  Identities=23%  Similarity=0.331  Sum_probs=90.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      |+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+.+ |++|
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   76 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEW-CNID   76 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHTSCTTT-CCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHhC-CCCC
Confidence            57999999999999999999999999999999988777666665   3568899999999999999999999998 8999


Q ss_pred             EEEecCCCCC------------ccceeeeeccceecccC
Q 033396           94 ILVSSAQLPY------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        94 ~li~~ag~~~------------~~~~~~~n~~g~~~~~~  120 (120)
                      +||||||+..            +.+.+++|+.|+++++|
T Consensus        77 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  115 (248)
T 3asu_A           77 ILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTR  115 (248)
T ss_dssp             EEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             EEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999862            24568999999887653

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.85  E-value=1.4e-21  Score=134.29  Aligned_cols=109  Identities=22%  Similarity=0.241  Sum_probs=90.2

Q ss_pred             cccCcEEEEecCC--CchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           10 SLKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        10 ~~~~~~~litGa~--~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      ++++|+++||||+  +|||++++++|+++|++|++++|+.. .++..+++....+.+.++.+|++|+++++++++++.+.
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEA   83 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence            4689999999999  99999999999999999999999874 33344444433234788999999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc---------------cceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPYS---------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~---------------~~~~~~n~~g~~~~~~  120 (120)
                      + |++|+||||||+...               ++.+++|+.|+++++|
T Consensus        84 ~-g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  130 (261)
T 2wyu_A           84 F-GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVAR  130 (261)
T ss_dssp             H-SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            9 899999999998641               4567899999887653

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.85  E-value=6.1e-22  Score=135.74  Aligned_cols=105  Identities=21%  Similarity=0.295  Sum_probs=84.9

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .|++++|+++||||++|||++++++|+++|++|++++|..++..   +   ..+.++.++.+|++|+++++++++.+.+ 
T Consensus         4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~---~~~~~~~~~~~D~~~~~~v~~~~~~~~~-   76 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVV---A---DLGDRARFAAADVTDEAAVASALDLAET-   76 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHH---H---HTCTTEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHH---H---hcCCceEEEECCCCCHHHHHHHHHHHHH-
Confidence            45689999999999999999999999999999999999654432   2   2366789999999999999999998877 


Q ss_pred             cCCcccEEEecCCCCC---------------ccceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPY---------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~---------------~~~~~~~n~~g~~~~~~  120 (120)
                      + +++|+||||||+..               +++.+++|+.|+++++|
T Consensus        77 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  123 (257)
T 3tl3_A           77 M-GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLR  123 (257)
T ss_dssp             H-SCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             h-CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHH
Confidence            8 89999999999753               35678999999887653

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.85  E-value=2e-21  Score=132.78  Aligned_cols=107  Identities=19%  Similarity=0.279  Sum_probs=88.8

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCE-EEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCH-HHHHHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIR-AQREKLMETVS   85 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~-~~~~~~~~~~~   85 (120)
                      ++++|+++||||++|||++++++|+++|++ |++++|+...  +..+++...  +.++.++.+|++|+ ++++++++++.
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHH
Confidence            468999999999999999999999999996 9999997632  112223222  56789999999998 99999999999


Q ss_pred             hhcCCcccEEEecCCCCC---ccceeeeeccceeccc
Q 033396           86 SQFDGKLNILVSSAQLPY---SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~---~~~~~~~n~~g~~~~~  119 (120)
                      +.+ +++|+||||||+..   +.+.+++|+.|+++++
T Consensus        80 ~~~-g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~  115 (254)
T 1sby_A           80 DQL-KTVDILINGAGILDDHQIERTIAINFTGLVNTT  115 (254)
T ss_dssp             HHH-SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHH
T ss_pred             Hhc-CCCCEEEECCccCCHHHHhhhheeeehhHHHHH
Confidence            999 89999999999865   3567899999988765

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.84  E-value=3.5e-21  Score=130.49  Aligned_cols=106  Identities=20%  Similarity=0.279  Sum_probs=92.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhcCCeEEE-EeccCCCHHHHHHHHHHHHhhcCC
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWKSKGLQVSG-NACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      +|+++||||++|||++++++|+++|++|+++ +|+.+..++..+++...+.++.. +.+|++|+++++++++++.+.+ +
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   79 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVL-G   79 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHH-T
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhc-C
Confidence            4789999999999999999999999999998 88888877777777766666667 8999999999999999999999 8


Q ss_pred             cccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           91 KLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        91 ~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      ++|+||||||+...           .+.+++|+.|+++++
T Consensus        80 ~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~  119 (245)
T 2ph3_A           80 GLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTT  119 (245)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHH
Confidence            99999999998652           356788998887765

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.84  E-value=2e-21  Score=133.97  Aligned_cols=107  Identities=15%  Similarity=0.141  Sum_probs=89.6

Q ss_pred             cccCcEEEEecC--CCchHHHHHHHHHHCCCEEEEeeCChHH-HHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396           10 SLKGMTALVTGG--TKGIGYAVVEELAAFGAIVHTCSRNETE-LNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus        10 ~~~~~~~litGa--~~~ig~~~a~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      .+++|+++|||+  ++|||++++++|+++|++|++++|+... +++..++   .+.++.++.+|++|+++++++++++.+
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR---LPAKAPLLELDVQNEEHLASLAGRVTE   80 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTT---SSSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHh---cCCCceEEEccCCCHHHHHHHHHHHHH
Confidence            478999999999  9999999999999999999999998755 3433332   255678899999999999999999999


Q ss_pred             hcCC---cccEEEecCCCCC----------------ccceeeeeccceecccC
Q 033396           87 QFDG---KLNILVSSAQLPY----------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        87 ~~~g---~id~li~~ag~~~----------------~~~~~~~n~~g~~~~~~  120 (120)
                      .+ |   ++|+||||||+..                +.+.+++|+.|+++++|
T Consensus        81 ~~-g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  132 (269)
T 2h7i_A           81 AI-GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAK  132 (269)
T ss_dssp             HH-CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             Hh-CCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHH
Confidence            99 7   9999999999864                13457899999887653

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.84  E-value=2.6e-21  Score=133.31  Aligned_cols=99  Identities=23%  Similarity=0.347  Sum_probs=87.1

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++++|+++||||++|||++++++|+++|++|++++|+...           +.++.++.+|++|+++++++++++.+.+ 
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-   72 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------EAKYDHIECDVTNPDQVKASIDHIFKEY-   72 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----------SCSSEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----------CCceEEEEecCCCHHHHHHHHHHHHHHc-
Confidence            4789999999999999999999999999999999997643           4567889999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      |++|+||||||+...           .+.+++|+.|+++++|
T Consensus        73 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  114 (264)
T 2dtx_A           73 GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASK  114 (264)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            899999999998652           4567899999887653

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.84  E-value=5.6e-21  Score=128.98  Aligned_cols=103  Identities=23%  Similarity=0.285  Sum_probs=88.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+|+++||||++|||++++++|+++|++|++++|+...+++..+++.    ++.++.+|++|+++++++++++.+.+ ++
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   78 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE----GALPLPGDVREEGDWARAVAAMEEAF-GE   78 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHHHHHHHH-SC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----hceEEEecCCCHHHHHHHHHHHHHHc-CC
Confidence            46899999999999999999999999999999999877766655442    57788999999999999999999999 89


Q ss_pred             ccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           92 LNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        92 id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +|+||||||+...           .+.+++|+.|+++++
T Consensus        79 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~  117 (234)
T 2ehd_A           79 LSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGI  117 (234)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHH
Confidence            9999999998652           356788888887654

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.83  E-value=1.9e-21  Score=133.37  Aligned_cols=100  Identities=22%  Similarity=0.330  Sum_probs=84.4

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .+.+.+|+++||||++|||++++++|+++|++|++++|+.+.++           .+.++.+|++|+++++++++++.+.
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (253)
T 2nm0_A           16 PRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----------GFLAVKCDITDTEQVEQAYKEIEET   84 (253)
T ss_dssp             ----CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----------TSEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-----------cceEEEecCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999864432           2678899999999999999999999


Q ss_pred             cCCcccEEEecCCCCC-----------ccceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~  119 (120)
                      + +++|+||||||+..           +.+.+++|+.|+++++
T Consensus        85 ~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  126 (253)
T 2nm0_A           85 H-GPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVV  126 (253)
T ss_dssp             T-CSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHH
Confidence            9 89999999999864           3456789999988765

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.83  E-value=5.7e-21  Score=130.09  Aligned_cols=106  Identities=23%  Similarity=0.328  Sum_probs=86.8

Q ss_pred             cccccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHH
Q 033396            6 EKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus         6 ~~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      ....++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   ...+.++.+|+++++++.+++++. 
T Consensus         7 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~-   82 (249)
T 3f9i_A            7 HHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL---KDNYTIEVCNLANKEECSNLISKT-   82 (249)
T ss_dssp             --CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHTC-
T ss_pred             cccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---ccCccEEEcCCCCHHHHHHHHHhc-
Confidence            4456789999999999999999999999999999999999988887776665   456888999999999988877643 


Q ss_pred             hhcCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           86 SQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                          +++|+||||||+...           .+.+++|+.|+++++
T Consensus        83 ----~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~  123 (249)
T 3f9i_A           83 ----SNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILN  123 (249)
T ss_dssp             ----SCCSEEEECCC-------------CHHHHHHHHTHHHHHHH
T ss_pred             ----CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHH
Confidence                789999999998652           456789999988765

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.83  E-value=8.3e-21  Score=134.20  Aligned_cols=108  Identities=23%  Similarity=0.358  Sum_probs=91.0

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeC---------ChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR---------NETELNQRIQEWKSKGLQVSGNACDLKIRAQREK   79 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   79 (120)
                      +++++|+++||||++|||++++++|+++|++|++.++         +....++..+++...+..+   .+|+++.+++++
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~---~~D~~~~~~~~~   81 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKA---VANYDSVEAGEK   81 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEE---EEECCCGGGHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeE---EEeCCCHHHHHH
Confidence            4578999999999999999999999999999999654         5666777777777666543   479999999999


Q ss_pred             HHHHHHhhcCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           80 LMETVSSQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        80 ~~~~~~~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      +++++.+.+ +++|+||||||+...           +..+++|+.|++++++
T Consensus        82 ~~~~~~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  132 (319)
T 1gz6_A           82 LVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTR  132 (319)
T ss_dssp             HHHHHHHHT-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999 899999999998653           3567899999887753

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.83  E-value=7.1e-21  Score=130.03  Aligned_cols=100  Identities=25%  Similarity=0.339  Sum_probs=86.1

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      |++++|+++||||++|||++++++|+++|++|++++|+.+.        ...+  +..+.+|++|+++++++++++.+.+
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~~~--~~~~~~D~~d~~~~~~~~~~~~~~~   72 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQYP--FATEVMDVADAAQVAQVCQRLLAET   72 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SCCS--SEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hcCC--ceEEEcCCCCHHHHHHHHHHHHHHc
Confidence            34789999999999999999999999999999999998641        1122  6788999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                       +++|+||||||+...           .+.+++|+.|+++++
T Consensus        73 -g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~  113 (250)
T 2fwm_X           73 -ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLF  113 (250)
T ss_dssp             -SCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHH
T ss_pred             -CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHH
Confidence             899999999998642           456889999988765

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.82  E-value=6.6e-21  Score=130.77  Aligned_cols=110  Identities=18%  Similarity=0.212  Sum_probs=90.0

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCC---CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHH
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFG---AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETV   84 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (120)
                      ...+++|+++||||++|||++++++|++.|   ++|++++|+....+.+ +++...+.++.++.+|++++++++++++++
T Consensus        16 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~   94 (267)
T 1sny_A           16 PRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNHSNIHILEIDLRNFDAYDKLVADI   94 (267)
T ss_dssp             ----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHHCTTEEEEECCTTCGGGHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhccCCceEEEEecCCChHHHHHHHHHH
Confidence            345889999999999999999999999999   9999999987654432 344444667999999999999999999999


Q ss_pred             HhhcCC--cccEEEecCCCCC-c-----------cceeeeeccceeccc
Q 033396           85 SSQFDG--KLNILVSSAQLPY-S-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        85 ~~~~~g--~id~li~~ag~~~-~-----------~~~~~~n~~g~~~~~  119 (120)
                      .+.+ +  ++|+||||||+.. .           ...+++|+.|+++++
T Consensus        95 ~~~~-g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  142 (267)
T 1sny_A           95 EGVT-KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLA  142 (267)
T ss_dssp             HHHH-GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             HHhc-CCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHH
Confidence            9988 6  7999999999875 1           345788998887765

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.82  E-value=5.1e-21  Score=132.12  Aligned_cols=101  Identities=30%  Similarity=0.345  Sum_probs=85.0

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      ++++++|+++||||++|||++++++|+++|++|++++|+.....           ....+.+|+++++++.++++++.+.
T Consensus        23 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-----------~~~~~~~Dv~~~~~~~~~~~~~~~~   91 (266)
T 3uxy_A           23 MQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-----------ADLHLPGDLREAAYADGLPGAVAAG   91 (266)
T ss_dssp             ---CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-----------CSEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             hhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-----------hhhccCcCCCCHHHHHHHHHHHHHh
Confidence            45689999999999999999999999999999999999865421           1244589999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      + |++|+||||||+...           ++.+++|+.|+++++|
T Consensus        92 ~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  134 (266)
T 3uxy_A           92 L-GRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICR  134 (266)
T ss_dssp             H-SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            9 899999999999763           4567899999988753

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.82  E-value=9.8e-21  Score=128.25  Aligned_cols=104  Identities=16%  Similarity=0.198  Sum_probs=88.6

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++|+++||||++|||++++++|+++|  ++|++++|+....+++. ++  .+.++.++.+|++++++++++++++.+.+ 
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~-~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   77 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK-SI--KDSRVHVLPLTVTCDKSLDTFVSKVGEIV-   77 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH-TC--CCTTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHH-hc--cCCceEEEEeecCCHHHHHHHHHHHHHhc-
Confidence            57899999999999999999999999  99999999877654432 22  35678999999999999999999999988 


Q ss_pred             C--cccEEEecCCCCC-c-----------cceeeeeccceeccc
Q 033396           90 G--KLNILVSSAQLPY-S-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g--~id~li~~ag~~~-~-----------~~~~~~n~~g~~~~~  119 (120)
                      +  ++|+||||||+.. .           ...+++|+.|+++++
T Consensus        78 g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~  121 (250)
T 1yo6_A           78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLT  121 (250)
T ss_dssp             GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHH
T ss_pred             CCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHH
Confidence            7  8999999999876 2           356788998887764

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.82  E-value=1.1e-20  Score=143.15  Aligned_cols=107  Identities=20%  Similarity=0.284  Sum_probs=89.2

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh---------HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE---------TELNQRIQEWKSKGLQVSGNACDLKIRAQREKL   80 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   80 (120)
                      ++++|+++||||++|||++++++|+++|++|++.+++.         ..+++..+++...++.+.   +|++|.++++++
T Consensus         5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~---~d~~d~~~~~~~   81 (604)
T 2et6_A            5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAV---ADYNNVLDGDKI   81 (604)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEE---EECCCTTCHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEE---EEcCCHHHHHHH
Confidence            47899999999999999999999999999999998764         456666777766666543   577777778889


Q ss_pred             HHHHHhhcCCcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           81 METVSSQFDGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        81 ~~~~~~~~~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                      ++++.+.+ |++|+||||||+..           |++.+++|+.|+|+++|
T Consensus        82 v~~~~~~~-G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~  131 (604)
T 2et6_A           82 VETAVKNF-GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTK  131 (604)
T ss_dssp             HHHHHHHH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999 99999999999865           35778999999998764

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.81  E-value=4.3e-21  Score=130.98  Aligned_cols=99  Identities=25%  Similarity=0.358  Sum_probs=84.4

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.+.+++           +..+.+|++|+++++++++++.+.+
T Consensus        11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-----------~~~~~~D~~~~~~~~~~~~~~~~~~   79 (247)
T 1uzm_A           11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-----------LFGVEVDVTDSDAVDRAFTAVEEHQ   79 (247)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-----------SEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-----------hcCeeccCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999998644321           1137899999999999999999999


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                       +++|+||||||+...           .+.+++|+.|+++++
T Consensus        80 -g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  120 (247)
T 1uzm_A           80 -GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVA  120 (247)
T ss_dssp             -SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence             899999999998652           456789999988765

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.81  E-value=1.4e-20  Score=128.19  Aligned_cols=101  Identities=22%  Similarity=0.311  Sum_probs=82.1

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+++|+++||||++|||++++++|+++|++|++++|+++.+++.. ++    .++.++.+|++|+++++++    .+.+ 
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~----~~~~~~~~D~~~~~~~~~~----~~~~-   72 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY----PGIQTRVLDVTKKKQIDQF----ANEV-   72 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS----TTEEEEECCTTCHHHHHHH----HHHC-
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc----cCceEEEeeCCCHHHHHHH----HHHh-
Confidence            367999999999999999999999999999999999976654332 22    2678899999999988744    4456 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      +++|+||||||+...           ++.+++|+.|+++++|
T Consensus        73 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~  114 (246)
T 2ag5_A           73 ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIK  114 (246)
T ss_dssp             SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence            899999999998653           3557899999887653

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.81  E-value=4.4e-20  Score=125.17  Aligned_cols=102  Identities=30%  Similarity=0.401  Sum_probs=83.9

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.    .+.++.+|++|+++++++++    .+
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~----~~   74 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALG----SV   74 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TC
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC----CCCEEEEeCCCHHHHHHHHH----Hc
Confidence            45789999999999999999999999999999999999877665555432    24566899999999888775    45


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                       +++|+||||||+...           ...+++|+.|+++++
T Consensus        75 -~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~  115 (244)
T 3d3w_A           75 -GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVS  115 (244)
T ss_dssp             -CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             -CCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHH
Confidence             789999999998653           356788998887765

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.80  E-value=2.8e-20  Score=140.96  Aligned_cols=107  Identities=23%  Similarity=0.333  Sum_probs=88.3

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +.+++|+++||||++|||++++++|+++|++|++.++..  +++..+++...++++..+.+|++  .+.+++++++.+++
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~  393 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKY  393 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhc
Confidence            357899999999999999999999999999999998643  23445566666778888888984  44567888888999


Q ss_pred             CCcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                       |++|+||||||+..           |++.+++|+.|+|+++|
T Consensus       394 -G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~  435 (604)
T 2et6_A          394 -GTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSR  435 (604)
T ss_dssp             -SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence             89999999999865           35678999999998764

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.80  E-value=1e-19  Score=123.32  Aligned_cols=102  Identities=31%  Similarity=0.413  Sum_probs=83.2

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++++|+++||||+++||++++++|+++|++|++++|+.+.+++..+++    ..+.++.+|++++++++++++    .+
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~----~~   74 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKALG----GI   74 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----TC
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cCCCcEEecCCCHHHHHHHHH----Hc
Confidence            3478999999999999999999999999999999999987766554432    124556899999999888876    45


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                       +++|+||||||+...           .+.+++|+.|+++++
T Consensus        75 -~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  115 (244)
T 1cyd_A           75 -GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVS  115 (244)
T ss_dssp             -CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             -CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHH
Confidence             789999999998652           346788998887764

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.79  E-value=2.5e-20  Score=141.46  Aligned_cols=109  Identities=23%  Similarity=0.307  Sum_probs=80.5

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeC---------ChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHH
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR---------NETELNQRIQEWKSKGLQVSGNACDLKIRAQRE   78 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   78 (120)
                      .+.+++|+++||||++|||+++|++|+++|++|++++|         +...+++..+++...+..+.   +|+++.+++.
T Consensus        14 ~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~D~~d~~~~~   90 (613)
T 3oml_A           14 KLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAV---ADYNSVIDGA   90 (613)
T ss_dssp             -CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEE---ECCCCGGGHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEE---EEeCCHHHHH
Confidence            35689999999999999999999999999999999987         55556777777877766543   7999999999


Q ss_pred             HHHHHHHhhcCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           79 KLMETVSSQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        79 ~~~~~~~~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      ++++++.+.+ |++|+||||||+...           ...+++|+.|+++++|
T Consensus        91 ~~~~~~~~~~-g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~  142 (613)
T 3oml_A           91 KVIETAIKAF-GRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQ  142 (613)
T ss_dssp             HHHC-----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHC-CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999 899999999999753           4668899999988764

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.79  E-value=4.4e-20  Score=137.99  Aligned_cols=107  Identities=21%  Similarity=0.155  Sum_probs=91.5

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCE-EEEe-eCCh-------------HHHHHHHHHHHhcCCeEEEEeccCCCHH
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAI-VHTC-SRNE-------------TELNQRIQEWKSKGLQVSGNACDLKIRA   75 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~-v~~~-~~~~-------------~~~~~~~~~~~~~~~~~~~~~~D~~~~~   75 (120)
                      -.+++++||||++|||.+++++|+++|++ |+++ +|+.             +..++..+++...+.++.++.+|++|++
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~  328 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE  328 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence            46899999999999999999999999987 7777 8873             4456677778778999999999999999


Q ss_pred             HHHHHHHHHHhhcCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           76 QREKLMETVSSQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        76 ~~~~~~~~~~~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      ++.++++++. .+ +++|+||||||+...           .+.+++|+.|++++.
T Consensus       329 ~v~~~~~~i~-~~-g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~  381 (525)
T 3qp9_A          329 AAARLLAGVS-DA-HPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLD  381 (525)
T ss_dssp             HHHHHHHTSC-TT-SCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH-hc-CCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999988 67 899999999999763           456788988888764

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.79  E-value=1.2e-19  Score=123.10  Aligned_cols=97  Identities=31%  Similarity=0.410  Sum_probs=83.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      +|+++||||++|||++++++|+++|++|++++|+.+..   .+++   +  +..+.+|+++ ++++++++++.+.+ +++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~---~--~~~~~~D~~~-~~~~~~~~~~~~~~-g~i   71 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA---AQSL---G--AVPLPTDLEK-DDPKGLVKRALEAL-GGL   71 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHH---T--CEEEECCTTT-SCHHHHHHHHHHHH-TSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHhh---C--cEEEecCCch-HHHHHHHHHHHHHc-CCC
Confidence            68999999999999999999999999999999987652   2333   3  6788999999 99999999999999 899


Q ss_pred             cEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           93 NILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        93 d~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      |+||||||+...           .+.+++|+.|+++++
T Consensus        72 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~  109 (239)
T 2ekp_A           72 HVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLA  109 (239)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            999999998642           456788999888765

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.79  E-value=2.2e-19  Score=132.20  Aligned_cols=105  Identities=26%  Similarity=0.364  Sum_probs=86.7

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChH--HHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET--ELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .+++|+++|||+++|||++++++|+++|++|++++|+..  .+++..+++   +  +.++.+|++|+++++++++++.+.
T Consensus       210 ~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~---~--~~~~~~Dvtd~~~v~~~~~~~~~~  284 (454)
T 3u0b_A          210 PLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKV---G--GTALTLDVTADDAVDKITAHVTEH  284 (454)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH---T--CEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc---C--CeEEEEecCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999998643  233333322   3  357899999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +++++|+||||||+...           .+.+++|+.|+++++
T Consensus       285 ~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~  327 (454)
T 3u0b_A          285 HGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLT  327 (454)
T ss_dssp             STTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             cCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHH
Confidence            93359999999999763           466889999988765

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.78  E-value=4.8e-20  Score=124.37  Aligned_cols=99  Identities=22%  Similarity=0.216  Sum_probs=83.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      |+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++++++++++++++.+    .+|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~----~~d   74 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---SNNVGYRARDLASHQEVEQLFEQLDS----IPS   74 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCSS----CCS
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---hhccCeEeecCCCHHHHHHHHHHHhh----cCC
Confidence            57999999999999999999999999999999988877666554   56788899999999999998876543    349


Q ss_pred             EEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           94 ILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        94 ~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +||||||+...           .+.+++|+.|+++++
T Consensus        75 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  111 (230)
T 3guy_A           75 TVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVL  111 (230)
T ss_dssp             EEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHH
Confidence            99999998653           456789999988765

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.78  E-value=1.2e-19  Score=123.25  Aligned_cols=99  Identities=15%  Similarity=0.025  Sum_probs=83.2

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC-
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD-   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-   89 (120)
                      .++|+++||||++|||++++++|+++|++|++++|+....+          ....++.+|++|+++++++++++.+.++ 
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   74 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----------SASVIVKMTDSFTEQADQVTAEVGKLLGD   74 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----------SEEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----------CCcEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            56899999999999999999999999999999999865432          2457788999999999999999999884 


Q ss_pred             CcccEEEecCCCCCc------------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~------------~~~~~~n~~g~~~~~  119 (120)
                      +++|+||||||+...            .+.+++|+.|++.++
T Consensus        75 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~  116 (241)
T 1dhr_A           75 QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISS  116 (241)
T ss_dssp             CCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHH
Confidence            589999999998542            345788888887764

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.77  E-value=8e-20  Score=123.70  Aligned_cols=98  Identities=12%  Similarity=0.048  Sum_probs=82.9

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC-C
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD-G   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-g   90 (120)
                      ++|+++||||++|||++++++|+++|++|++++|++...+          ....++.+|++++++++++++++.+.++ +
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g   71 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----------DSNILVDGNKNWTEQEQSILEQTASSLQGS   71 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----------SEEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----------cccEEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            5789999999999999999999999999999999875431          2456788999999999999999998874 4


Q ss_pred             cccEEEecCCCCC------------ccceeeeeccceeccc
Q 033396           91 KLNILVSSAQLPY------------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        91 ~id~li~~ag~~~------------~~~~~~~n~~g~~~~~  119 (120)
                      ++|+||||||+..            +.+.+++|+.|+++++
T Consensus        72 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  112 (236)
T 1ooe_A           72 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAA  112 (236)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHH
Confidence            8999999999754            2455788888887765

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.77  E-value=8.2e-20  Score=122.80  Aligned_cols=87  Identities=25%  Similarity=0.297  Sum_probs=73.8

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++++|+++||||++|||++++++|+++|++|++++|+..                    +|++|+++++++++++    
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------------~D~~~~~~v~~~~~~~----   57 (223)
T 3uce_A            2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------------LDISDEKSVYHYFETI----   57 (223)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------------CCTTCHHHHHHHHHHH----
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------------cCCCCHHHHHHHHHHh----
Confidence            4578999999999999999999999999999999998764                    8999999999988765    


Q ss_pred             CCcccEEEecCCCCC------------ccceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPY------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~------------~~~~~~~n~~g~~~~~~  120 (120)
                       +++|+||||||+..            +.+.+++|+.|+++++|
T Consensus        58 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  100 (223)
T 3uce_A           58 -GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAK  100 (223)
T ss_dssp             -CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHH
Confidence             89999999999873            24567889998887653

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.77  E-value=3.7e-20  Score=131.17  Aligned_cols=106  Identities=17%  Similarity=0.157  Sum_probs=83.6

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH---HHHHHHHHH---hcCCeEEEEeccCCCHHHHHHHHHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE---LNQRIQEWK---SKGLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      ++|+++||||++|||++++++|+++|++|++++++...   ..+..+.+.   ..+.++.++.+|++|+++++++++++.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            37899999999999999999999999998888765432   223333322   124678999999999999999998873


Q ss_pred             hhcCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           86 SQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                        + +++|+||||||+...           .+.+++|+.|+++++|
T Consensus        81 --~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  123 (327)
T 1jtv_A           81 --E-GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQ  123 (327)
T ss_dssp             --T-SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             --c-CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHH
Confidence              4 799999999998642           4568899999887753

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.77  E-value=1.8e-19  Score=123.12  Aligned_cols=96  Identities=15%  Similarity=0.062  Sum_probs=81.4

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .-+|+++||||++|||++++++|+++|++|++++|+.....            ...+.+|++|+++++++++++.+.+ +
T Consensus        20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------------~~~~~~d~~d~~~v~~~~~~~~~~~-g   86 (251)
T 3orf_A           20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------------DHSFTIKDSGEEEIKSVIEKINSKS-I   86 (251)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------------SEEEECSCSSHHHHHHHHHHHHTTT-C
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------------ccceEEEeCCHHHHHHHHHHHHHHc-C
Confidence            34789999999999999999999999999999999875432            1356789999999999999999999 8


Q ss_pred             cccEEEecCCCCCc------------cceeeeeccceeccc
Q 033396           91 KLNILVSSAQLPYS------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        91 ~id~li~~ag~~~~------------~~~~~~n~~g~~~~~  119 (120)
                      ++|+||||||+...            .+.+++|+.|+++++
T Consensus        87 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  127 (251)
T 3orf_A           87 KVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASA  127 (251)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHH
Confidence            99999999997532            456788999888765

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.77  E-value=5.9e-19  Score=137.19  Aligned_cols=107  Identities=24%  Similarity=0.325  Sum_probs=94.4

Q ss_pred             cCcEEEEecCCCchHHHHHHHHH-HCCC-EEEEeeCCh---HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396           12 KGMTALVTGGTKGIGYAVVEELA-AFGA-IVHTCSRNE---TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~-~~g~-~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      .+|+++|||+++|||++++++|+ ++|+ +|++++|+.   +..++..++++..+.++.++.||++|+++++++++++.+
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            68999999999999999999999 7998 599999983   456778888888899999999999999999999999877


Q ss_pred             hcCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           87 QFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      .+  +||+||||||+..+           ++.+++|+.|+|++.|
T Consensus       609 ~~--~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~  651 (795)
T 3slk_A          609 EH--PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLE  651 (795)
T ss_dssp             TS--CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHH
T ss_pred             hC--CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHH
Confidence            64  89999999999763           5678999999998753

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.77  E-value=1.1e-19  Score=124.30  Aligned_cols=100  Identities=18%  Similarity=0.195  Sum_probs=81.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      |+++||||++|||++++++|+++|++|++++|+.+.++...+ +...+.++..+     |+++++++++++.+.+ +++|
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~-g~iD   74 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAY-GQVD   74 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHH-SCCC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHh-CCCC
Confidence            689999999999999999999999999999998876665544 55545555443     6677888999999999 8999


Q ss_pred             EEEecCCCC-C-----------ccceeeeeccceecccC
Q 033396           94 ILVSSAQLP-Y-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        94 ~li~~ag~~-~-----------~~~~~~~n~~g~~~~~~  120 (120)
                      +||||||+. .           +++.+++|+.|+++++|
T Consensus        75 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  113 (254)
T 1zmt_A           75 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVN  113 (254)
T ss_dssp             EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             EEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999987 3           24568899999887653

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.77  E-value=1.8e-18  Score=125.80  Aligned_cols=91  Identities=23%  Similarity=0.246  Sum_probs=78.8

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHH-CCCEEEEeeCChHHHH------------HHHHHHHhcCCeEEEEeccCCCHHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAA-FGAIVHTCSRNETELN------------QRIQEWKSKGLQVSGNACDLKIRAQRE   78 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~-~g~~v~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~D~~~~~~~~   78 (120)
                      .+|++|||||++|||+++++.|++ .|++|++++|+.+..+            ...+.+...+..+..+.+|++++++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            589999999999999999999999 9999999988754321            233555667888999999999999999


Q ss_pred             HHHHHHHhhcCCcccEEEecCCCC
Q 033396           79 KLMETVSSQFDGKLNILVSSAQLP  102 (120)
Q Consensus        79 ~~~~~~~~~~~g~id~li~~ag~~  102 (120)
                      ++++++.+.++|++|+||||||..
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~  163 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASP  163 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccc
Confidence            999999999856999999999973

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.76  E-value=6.2e-18  Score=122.29  Aligned_cols=91  Identities=18%  Similarity=0.130  Sum_probs=78.8

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHH-CCCEEEEeeCChHHH------------HHHHHHHHhcCCeEEEEeccCCCHHHH
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAA-FGAIVHTCSRNETEL------------NQRIQEWKSKGLQVSGNACDLKIRAQR   77 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~-~g~~v~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~D~~~~~~~   77 (120)
                      -.+|++|||||++|||+++++.|++ .|++|++++++....            +...+.+...+..+..+.+|+++++++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            4689999999999999999999999 999999998864321            123334556688899999999999999


Q ss_pred             HHHHHHHHhhcCCcccEEEecCCCC
Q 033396           78 EKLMETVSSQFDGKLNILVSSAQLP  102 (120)
Q Consensus        78 ~~~~~~~~~~~~g~id~li~~ag~~  102 (120)
                      +++++++.+.+ |++|+||||||+.
T Consensus       125 ~~~v~~i~~~~-G~IDiLVNNAG~~  148 (405)
T 3zu3_A          125 QLTIDAIKQDL-GQVDQVIYSLASP  148 (405)
T ss_dssp             HHHHHHHHHHT-SCEEEEEECCCCS
T ss_pred             HHHHHHHHHHc-CCCCEEEEcCccc
Confidence            99999999999 9999999999985

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.75  E-value=1.1e-18  Score=129.61  Aligned_cols=105  Identities=27%  Similarity=0.271  Sum_probs=90.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCCh---HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE---TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++++|||+++|||.+++++|+++|+ +|++++|+.   +..++..+++...+.++.++.+|++|++++.++++++.+. 
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~-  317 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED-  317 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-
Confidence            48999999999999999999999998 799999864   3356777788888999999999999999999999988665 


Q ss_pred             CCcccEEEecCCCC-Cc-----------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLP-YS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~-~~-----------~~~~~~n~~g~~~~~  119 (120)
                       +++|+||||||+. ..           .+.+++|+.|++++.
T Consensus       318 -g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~  359 (496)
T 3mje_A          318 -APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLH  359 (496)
T ss_dssp             -SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHH
T ss_pred             -CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHH
Confidence             5899999999997 32           456788888887664

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.75  E-value=7.1e-20  Score=129.68  Aligned_cols=108  Identities=14%  Similarity=0.070  Sum_probs=84.0

Q ss_pred             cCcEEEEecCCC--chHHHHHHHHHHCCCEEEEeeCChHH---------HHHHHHHHHh---cCCeEEEEeccCCCH--H
Q 033396           12 KGMTALVTGGTK--GIGYAVVEELAAFGAIVHTCSRNETE---------LNQRIQEWKS---KGLQVSGNACDLKIR--A   75 (120)
Q Consensus        12 ~~~~~litGa~~--~ig~~~a~~l~~~g~~v~~~~~~~~~---------~~~~~~~~~~---~~~~~~~~~~D~~~~--~   75 (120)
                      ++|+++|||+++  |||++++++|+++|++|+++++++..         .+.....+..   ....+..+.+|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            478999999975  99999999999999999988776521         1111111111   124578899999888  7


Q ss_pred             ------------------HHHHHHHHHHhhcCCcccEEEecCCCCC-------------ccceeeeeccceecccC
Q 033396           76 ------------------QREKLMETVSSQFDGKLNILVSSAQLPY-------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        76 ------------------~~~~~~~~~~~~~~g~id~li~~ag~~~-------------~~~~~~~n~~g~~~~~~  120 (120)
                                        ++.++++++.+++ |++|+||||||+..             +.+.+++|+.|+++++|
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~-g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  155 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKY-GKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCK  155 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHH-CCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhc-CCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence                              8999999999999 89999999999742             25678999999988753

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.75  E-value=3.6e-18  Score=140.27  Aligned_cols=111  Identities=24%  Similarity=0.313  Sum_probs=92.3

Q ss_pred             cccccCcEEEEecCCCc-hHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHH----hcCCeEEEEeccCCCHHHHHHHH
Q 033396            8 RWSLKGMTALVTGGTKG-IGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWK----SKGLQVSGNACDLKIRAQREKLM   81 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~-ig~~~a~~l~~~g~~v~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~   81 (120)
                      .+++++|++|||||++| ||++++++|++.|++|+++ +|+...+++..+++.    ..+.++.++.+|++|++++++++
T Consensus       670 ~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv  749 (1887)
T 2uv8_A          670 GVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI  749 (1887)
T ss_dssp             CBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHH
Confidence            45688999999999998 9999999999999999998 577666665555553    23678999999999999999999


Q ss_pred             HHHHhh-----cCC-cccEEEecCCCCCc--------------cceeeeeccceeccc
Q 033396           82 ETVSSQ-----FDG-KLNILVSSAQLPYS--------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        82 ~~~~~~-----~~g-~id~li~~ag~~~~--------------~~~~~~n~~g~~~~~  119 (120)
                      +++.+.     + | ++|+||||||+...              .+.+++|+.|++.++
T Consensus       750 ~~i~~~~~~~G~-G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~  806 (1887)
T 2uv8_A          750 EFIYDTEKNGGL-GWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCV  806 (1887)
T ss_dssp             HHHHSCTTTTSC-CCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHH
T ss_pred             HHHHHhcccccc-CCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHH
Confidence            999988     6 6 99999999998643              245788888877654

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.75  E-value=6.5e-19  Score=119.81  Aligned_cols=97  Identities=20%  Similarity=0.155  Sum_probs=80.0

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHH-CCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAA-FGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .++|+++||||++|||++++++|++ .|++|++++++...          ....+.++.+|++|+++++++++.+.  + 
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~----------~~~~~~~~~~Dv~~~~~v~~~~~~~~--~-   68 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF----------SAENLKFIKADLTKQQDITNVLDIIK--N-   68 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC----------CCTTEEEEECCTTCHHHHHHHHHHTT--T-
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc----------ccccceEEecCcCCHHHHHHHHHHHH--h-
Confidence            3578999999999999999999999 78999999987541          12356889999999999999995443  5 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      +++|+||||||+...           ++.+++|+.|+++++|
T Consensus        69 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  110 (244)
T 4e4y_A           69 VSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIK  110 (244)
T ss_dssp             CCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHH
Confidence            799999999999652           4668999999887653

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.74  E-value=2.1e-18  Score=127.96  Aligned_cols=107  Identities=25%  Similarity=0.255  Sum_probs=90.9

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCE-EEEeeCChH---HHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNET---ELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~-v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      -.+++++||||++|||.+++++|+++|++ |++++|+..   ..++..+++...+.++.++.+|++|++++.++++++ .
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~  302 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-G  302 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-C
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-H
Confidence            35789999999999999999999999985 999999864   356667777777889999999999999999999988 5


Q ss_pred             hcCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           87 QFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      .+ +++|+||||||+...           .+.+++|+.|++++.
T Consensus       303 ~~-g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~  345 (486)
T 2fr1_A          303 DD-VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLH  345 (486)
T ss_dssp             TT-SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHH
T ss_pred             hc-CCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHH
Confidence            56 899999999998763           345778888877654

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.74  E-value=1.7e-19  Score=122.74  Aligned_cols=103  Identities=23%  Similarity=0.217  Sum_probs=76.3

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      |++++|+++||||++|||++++++|++ |++|++++|+...+++..+     ...+.++.+|+++..+ .+.+.+..+.+
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~-~~~~~~~~~~~   73 (245)
T 3e9n_A            1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-----IEGVEPIESDIVKEVL-EEGGVDKLKNL   73 (245)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-----STTEEEEECCHHHHHH-TSSSCGGGTTC
T ss_pred             CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-----hcCCcceecccchHHH-HHHHHHHHHhc
Confidence            347899999999999999999999998 8999999999877654433     2357889999998776 44555556677


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                       +++|+||||||+...           .+.+++|+.|+++++
T Consensus        74 -~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~  114 (245)
T 3e9n_A           74 -DHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELS  114 (245)
T ss_dssp             -SCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHH
T ss_pred             -CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHH
Confidence             899999999998753           456789999988765

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.74  E-value=3.5e-18  Score=140.17  Aligned_cols=111  Identities=24%  Similarity=0.337  Sum_probs=91.2

Q ss_pred             cccccCcEEEEecCCCc-hHHHHHHHHHHCCCEEEEee-CChHHHHHHHHHH----HhcCCeEEEEeccCCCHHHHHHHH
Q 033396            8 RWSLKGMTALVTGGTKG-IGYAVVEELAAFGAIVHTCS-RNETELNQRIQEW----KSKGLQVSGNACDLKIRAQREKLM   81 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~-ig~~~a~~l~~~g~~v~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~   81 (120)
                      .+++++|++|||||++| ||++++++|++.|++|++++ |+...+.+..+++    ...+.++.++.+|++|++++.+++
T Consensus       647 ~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv  726 (1878)
T 2uv9_A          647 GLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALV  726 (1878)
T ss_dssp             CBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHH
Confidence            34688999999999998 99999999999999999985 6665555444444    334778999999999999999999


Q ss_pred             HHHHhh---cCC-cccEEEecCCCCCc--------------cceeeeeccceeccc
Q 033396           82 ETVSSQ---FDG-KLNILVSSAQLPYS--------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        82 ~~~~~~---~~g-~id~li~~ag~~~~--------------~~~~~~n~~g~~~~~  119 (120)
                      +++.+.   + | ++|+||||||+...              .+.+++|+.|++.++
T Consensus       727 ~~i~~~~~~~-G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~  781 (1878)
T 2uv9_A          727 NYIYDTKNGL-GWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAI  781 (1878)
T ss_dssp             HHHHCSSSSC-CCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHH
T ss_pred             HHHHHhhccc-CCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHH
Confidence            999988   8 7 99999999998643              245778888877653

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.74  E-value=6.3e-19  Score=119.94  Aligned_cols=98  Identities=22%  Similarity=0.168  Sum_probs=79.7

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEe-e--CChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTC-S--RNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      +|+++|||+++|||++++++|+++|++|+++ +  |+.+.+++..+++  .+.       |+.|+++++++++++.+.+ 
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~~~-------~~~~~~~v~~~~~~~~~~~-   70 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--PGT-------IALAEQKPERLVDATLQHG-   70 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--TTE-------EECCCCCGGGHHHHHGGGS-
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--CCC-------cccCHHHHHHHHHHHHHHc-
Confidence            4789999999999999999999999999999 6  9887777666655  222       3336777888999999999 


Q ss_pred             CcccEEEecCCCCCc--------------cceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPYS--------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~~--------------~~~~~~n~~g~~~~~~  120 (120)
                      |++|+||||||+...              ++.+++|+.|+++++|
T Consensus        71 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  115 (244)
T 1zmo_A           71 EAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQ  115 (244)
T ss_dssp             SCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            899999999997643              3467899999887653

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.74  E-value=4.4e-18  Score=144.46  Aligned_cols=91  Identities=24%  Similarity=0.265  Sum_probs=82.3

Q ss_pred             cccCcEEEEecCCCc-hHHHHHHHHHHCCCEEEEeeCChHH-----HHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHH
Q 033396           10 SLKGMTALVTGGTKG-IGYAVVEELAAFGAIVHTCSRNETE-----LNQRIQEWKSKGLQVSGNACDLKIRAQREKLMET   83 (120)
Q Consensus        10 ~~~~~~~litGa~~~-ig~~~a~~l~~~g~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   83 (120)
                      .+++|+++||||++| ||+++++.|+++|++|++++|+...     ++++.+++...+..+..+.+|+++++++++++++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            379999999999999 9999999999999999999998655     5566666666678899999999999999999999


Q ss_pred             HHh----hcCCcccEEEecCCC
Q 033396           84 VSS----QFDGKLNILVSSAQL  101 (120)
Q Consensus        84 ~~~----~~~g~id~li~~ag~  101 (120)
                      +.+    .+ |++|+||||||+
T Consensus      2213 i~~~~~~~f-G~IDILVNNAGi 2233 (3089)
T 3zen_D         2213 VGTEQTESL-GPQSIHLKDAQT 2233 (3089)
T ss_dssp             HTSCCEEEE-SSSEEEECCCCC
T ss_pred             HHhhhhhhc-CCCCEEEECCCc
Confidence            988    88 999999999998

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.74  E-value=6.1e-19  Score=119.08  Aligned_cols=93  Identities=23%  Similarity=0.220  Sum_probs=79.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      +|+++||||+++||++++++|+++|++|++++|+.. .           ..+.++.+|++++++++++++++ +.+ +++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-----------~~~~~~~~D~~~~~~~~~~~~~~-~~~-~~~   67 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-----------EDLIYVEGDVTREEDVRRAVARA-QEE-APL   67 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-----------SSSEEEECCTTCHHHHHHHHHHH-HHH-SCE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-----------cceEEEeCCCCCHHHHHHHHHHH-Hhh-CCc
Confidence            689999999999999999999999999999999864 1           13478899999999999999999 778 899


Q ss_pred             cEEEecCCCCCc---------------cceeeeeccceeccc
Q 033396           93 NILVSSAQLPYS---------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        93 d~li~~ag~~~~---------------~~~~~~n~~g~~~~~  119 (120)
                      |++|||||+...               .+.+++|+.|+++++
T Consensus        68 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  109 (242)
T 1uay_A           68 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVL  109 (242)
T ss_dssp             EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHH
T ss_pred             eEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHH
Confidence            999999998642               345678888887654

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.73  E-value=2.6e-17  Score=120.03  Aligned_cols=91  Identities=21%  Similarity=0.234  Sum_probs=78.9

Q ss_pred             ccCcEEEEecCCCchHHH--HHHHHHHCCCEEEEeeCChHH------------HHHHHHHHHhcCCeEEEEeccCCCHHH
Q 033396           11 LKGMTALVTGGTKGIGYA--VVEELAAFGAIVHTCSRNETE------------LNQRIQEWKSKGLQVSGNACDLKIRAQ   76 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~--~a~~l~~~g~~v~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~D~~~~~~   76 (120)
                      ..+|+++||||++|||++  +++.|++.|++|++++|+...            .+...+.+...+..+..+.+|++++++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            579999999999999999  999999999999999886432            233444455567889999999999999


Q ss_pred             HHHHHHHHHhhcCCcccEEEecCCCC
Q 033396           77 REKLMETVSSQFDGKLNILVSSAQLP  102 (120)
Q Consensus        77 ~~~~~~~~~~~~~g~id~li~~ag~~  102 (120)
                      ++++++++.+.+ |++|+||||||..
T Consensus       138 v~~~v~~i~~~~-G~IDiLVnNAG~~  162 (418)
T 4eue_A          138 KDKVIKYIKDEF-GKIDLFVYSLAAP  162 (418)
T ss_dssp             HHHHHHHHHHTT-CCEEEEEECCCCS
T ss_pred             HHHHHHHHHHHc-CCCCEEEECCccc
Confidence            999999999999 8999999999985

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.73  E-value=1.4e-18  Score=140.11  Aligned_cols=113  Identities=24%  Similarity=0.309  Sum_probs=92.3

Q ss_pred             cccccccCcEEEEecCCCc-hHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHh----cCCeEEEEeccCCCHHHHHH
Q 033396            6 EKRWSLKGMTALVTGGTKG-IGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWKS----KGLQVSGNACDLKIRAQREK   79 (120)
Q Consensus         6 ~~~~~~~~~~~litGa~~~-ig~~~a~~l~~~g~~v~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~   79 (120)
                      ...+++++|+++||||++| ||++++++|+++|++|+++ +|+...+++..+++..    .+.++.++.+|++|++++++
T Consensus       469 ~~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVea  548 (1688)
T 2pff_A          469 XXXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEA  548 (1688)
T ss_dssp             SSCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHH
T ss_pred             ccccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHH
Confidence            3345688999999999998 9999999999999999998 5666555555555532    26789999999999999999


Q ss_pred             HHHHHHhh-----cCC-cccEEEecCCCCCc--------------cceeeeeccceeccc
Q 033396           80 LMETVSSQ-----FDG-KLNILVSSAQLPYS--------------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        80 ~~~~~~~~-----~~g-~id~li~~ag~~~~--------------~~~~~~n~~g~~~~~  119 (120)
                      +++++.+.     + | ++|+||||||+...              .+.+++|+.|++.++
T Consensus       549 LVe~I~e~~~~~Gf-G~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Lt  607 (1688)
T 2pff_A          549 LIEFIYDTEKNGGL-GWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCV  607 (1688)
T ss_dssp             HHHHHHSCTTSSSC-CCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHH
T ss_pred             HHHHHHHhcccccc-CCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999988     7 6 89999999998643              345788888877654

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.71  E-value=5.9e-18  Score=115.58  Aligned_cols=95  Identities=31%  Similarity=0.390  Sum_probs=74.9

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.+..    +++   + .+.++ +|+  +++++++++++    
T Consensus        15 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~----~~~---~-~~~~~-~D~--~~~~~~~~~~~----   79 (249)
T 1o5i_A           15 LGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL----KRS---G-HRYVV-CDL--RKDLDLLFEKV----   79 (249)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHT---C-SEEEE-CCT--TTCHHHHHHHS----
T ss_pred             hccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH----Hhh---C-CeEEE-eeH--HHHHHHHHHHh----
Confidence            458999999999999999999999999999999999987332    222   3 56677 999  45566666554    


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                       .++|+||||||+...           .+.+++|+.|+++++
T Consensus        80 -~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~  120 (249)
T 1o5i_A           80 -KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIV  120 (249)
T ss_dssp             -CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             -cCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence             479999999998653           456788998887764

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.71  E-value=3.4e-18  Score=120.43  Aligned_cols=111  Identities=23%  Similarity=0.215  Sum_probs=76.1

Q ss_pred             ccccCcEEEEecC--CCchHHHHHHHHHHCCCEEEEeeCCh-----------HHHH-----------HHHHHHHhcCCe-
Q 033396            9 WSLKGMTALVTGG--TKGIGYAVVEELAAFGAIVHTCSRNE-----------TELN-----------QRIQEWKSKGLQ-   63 (120)
Q Consensus         9 ~~~~~~~~litGa--~~~ig~~~a~~l~~~g~~v~~~~~~~-----------~~~~-----------~~~~~~~~~~~~-   63 (120)
                      +++++|+++|||+  ++|||++++++|+++|++|++++|++           ..++           +..+++...+.. 
T Consensus         5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (319)
T 2ptg_A            5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDL   84 (319)
T ss_dssp             CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccc
Confidence            3478999999999  89999999999999999999998653           1111           122233222211 


Q ss_pred             --EEEEecc------------CCC--------HHHHHHHHHHHHhhcCCcccEEEecCCCCC-------------cccee
Q 033396           64 --VSGNACD------------LKI--------RAQREKLMETVSSQFDGKLNILVSSAQLPY-------------SQRKF  108 (120)
Q Consensus        64 --~~~~~~D------------~~~--------~~~~~~~~~~~~~~~~g~id~li~~ag~~~-------------~~~~~  108 (120)
                        ...+.+|            +++        +++++++++++.+.+ |++|+||||||+..             |.+.+
T Consensus        85 ~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~  163 (319)
T 2ptg_A           85 VFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADV-GQIDILVHSLANGPEVTKPLLQTSRKGYLAAV  163 (319)
T ss_dssp             CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHH-SCEEEEEEEEECCSSSSSCGGGCCHHHHHHHH
T ss_pred             cccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHc-CCCCEEEECCccCCCCCCccccCCHHHHHHHH
Confidence              2333333            333        447899999999999 89999999999752             24568


Q ss_pred             eeeccceecccC
Q 033396          109 FVKSRGPYGSIH  120 (120)
Q Consensus       109 ~~n~~g~~~~~~  120 (120)
                      ++|+.|+++++|
T Consensus       164 ~vN~~g~~~l~~  175 (319)
T 2ptg_A          164 SSSSYSFVSLLQ  175 (319)
T ss_dssp             HHHTHHHHHHHH
T ss_pred             hHhhHHHHHHHH
Confidence            899999887753

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.71  E-value=4.8e-18  Score=119.54  Aligned_cols=111  Identities=23%  Similarity=0.236  Sum_probs=79.2

Q ss_pred             ccccCcEEEEecC--CCchHHHHHHHHHHCCCEEEEeeCChHH------H-HHHHHHHHhc--CCe---EEEEecc----
Q 033396            9 WSLKGMTALVTGG--TKGIGYAVVEELAAFGAIVHTCSRNETE------L-NQRIQEWKSK--GLQ---VSGNACD----   70 (120)
Q Consensus         9 ~~~~~~~~litGa--~~~ig~~~a~~l~~~g~~v~~~~~~~~~------~-~~~~~~~~~~--~~~---~~~~~~D----   70 (120)
                      +++++|+++||||  ++|||++++++|+++|++|++++|++..      . ....+++.+.  +..   +.++.+|    
T Consensus         5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~   84 (315)
T 2o2s_A            5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFD   84 (315)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCS
T ss_pred             ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhcccccccccccccccccc
Confidence            4478999999999  8999999999999999999999876410      0 0001111111  211   2333333    


Q ss_pred             --------CCC--------HHHHHHHHHHHHhhcCCcccEEEecCCCCC-------------ccceeeeeccceecccC
Q 033396           71 --------LKI--------RAQREKLMETVSSQFDGKLNILVSSAQLPY-------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        71 --------~~~--------~~~~~~~~~~~~~~~~g~id~li~~ag~~~-------------~~~~~~~n~~g~~~~~~  120 (120)
                              +++        +++++++++++.+.+ |++|+||||||+..             |.+.+++|+.|+++++|
T Consensus        85 ~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  162 (315)
T 2o2s_A           85 KPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDL-GNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQ  162 (315)
T ss_dssp             STTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHH-CSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccchhhhhhhcccccccCCHHHHHHHHHHHHHhc-CCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence                    332        567899999999999 89999999999752             24568899999887753

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.70  E-value=9.4e-18  Score=110.96  Aligned_cols=94  Identities=21%  Similarity=0.220  Sum_probs=78.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      |+++||||+++||++++++|+++  +|++++|++..+++..+++.   .  .++.+|++|++++.+++++    + +++|
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~---~--~~~~~D~~~~~~~~~~~~~----~-~~id   68 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG---A--RALPADLADELEAKALLEE----A-GPLD   68 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT---C--EECCCCTTSHHHHHHHHHH----H-CSEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc---C--cEEEeeCCCHHHHHHHHHh----c-CCCC
Confidence            57999999999999999999998  99999999877766665553   2  7888999999999999877    5 7999


Q ss_pred             EEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           94 ILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        94 ~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      +||||||+...           .+.+++|+.|+++++
T Consensus        69 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  105 (207)
T 2yut_A           69 LLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVL  105 (207)
T ss_dssp             EEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            99999998653           345788888887664

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.70  E-value=4.7e-17  Score=121.35  Aligned_cols=102  Identities=25%  Similarity=0.232  Sum_probs=86.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChH---HHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNET---ELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .+++++|||+++|||.+++++|+++|+ +|++++|+..   ..++..+++...+.++.++.+|++|++++.+++++    
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~----  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA----  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH----
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc----
Confidence            578999999999999999999999998 6999999863   35667777877788999999999999999999876    


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                        +++|+||||||+...           ...+++|+.|++++.
T Consensus       334 --~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~  374 (511)
T 2z5l_A          334 --YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLH  374 (511)
T ss_dssp             --SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred             --CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHH
Confidence              689999999999764           345677888877653

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.70  E-value=3e-18  Score=117.88  Aligned_cols=91  Identities=18%  Similarity=0.198  Sum_probs=78.0

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      ++|+++||||+|+||++++++|+++|++|++++|++....         +..+.++.+|++|++++.+++        .+
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~--------~~   64 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---------GPNEECVQCDLADANAVNAMV--------AG   64 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---------CTTEEEEECCTTCHHHHHHHH--------TT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---------CCCCEEEEcCCCCHHHHHHHH--------cC
Confidence            3578999999999999999999999999999999864321         457889999999999998888        46


Q ss_pred             ccEEEecCCCCCc---cceeeeeccceeccc
Q 033396           92 LNILVSSAQLPYS---QRKFFVKSRGPYGSI  119 (120)
Q Consensus        92 id~li~~ag~~~~---~~~~~~n~~g~~~~~  119 (120)
                      +|+||||||+...   .+.+++|+.|+++++
T Consensus        65 ~D~vi~~Ag~~~~~~~~~~~~~N~~g~~~l~   95 (267)
T 3rft_A           65 CDGIVHLGGISVEKPFEQILQGNIIGLYNLY   95 (267)
T ss_dssp             CSEEEECCSCCSCCCHHHHHHHHTHHHHHHH
T ss_pred             CCEEEECCCCcCcCCHHHHHHHHHHHHHHHH
Confidence            9999999998653   456889999988765

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.68  E-value=4.2e-17  Score=137.76  Aligned_cols=106  Identities=21%  Similarity=0.248  Sum_probs=87.9

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCE-EEEeeCChHH---HHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETE---LNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~-v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .+|+++||||++|||++++++|+++|++ |++++|+...   ..+..+++...+.++.++.+|++|+++++++++++. .
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~-~ 1961 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEAT-Q 1961 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHH-h
Confidence            6899999999999999999999999997 8888887532   345566666678899999999999999999999987 4


Q ss_pred             cCCcccEEEecCCCCC-----------ccceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~  119 (120)
                      + |++|+||||||+..           |++.+++|+.|+|++.
T Consensus      1962 ~-g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~ 2003 (2512)
T 2vz8_A         1962 L-GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLD 2003 (2512)
T ss_dssp             H-SCEEEEEECCCC----------------CTTTTHHHHHHHH
T ss_pred             c-CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHH
Confidence            7 89999999999865           3677899999998763

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.68  E-value=5e-17  Score=113.28  Aligned_cols=112  Identities=21%  Similarity=0.204  Sum_probs=79.1

Q ss_pred             cccccCcEEEEecCC--CchHHHHHHHHHHCCCEEEEeeCChHHH-------HHHHHHHHhc--CC---eEEEEecc---
Q 033396            8 RWSLKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETEL-------NQRIQEWKSK--GL---QVSGNACD---   70 (120)
Q Consensus         8 ~~~~~~~~~litGa~--~~ig~~~a~~l~~~g~~v~~~~~~~~~~-------~~~~~~~~~~--~~---~~~~~~~D---   70 (120)
                      .+++++|+++||||+  +|||++++++|+++|++|++++|++...       .+..+++.+.  +.   ....+.+|   
T Consensus         3 ~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (297)
T 1d7o_A            3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF   82 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred             ccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceec
Confidence            345789999999999  9999999999999999999998753211       0000111111  11   12333333   


Q ss_pred             -----CC----C--------HHHHHHHHHHHHhhcCCcccEEEecCCCCC-------------ccceeeeeccceecccC
Q 033396           71 -----LK----I--------RAQREKLMETVSSQFDGKLNILVSSAQLPY-------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        71 -----~~----~--------~~~~~~~~~~~~~~~~g~id~li~~ag~~~-------------~~~~~~~n~~g~~~~~~  120 (120)
                           ++    |        +++++++++++.+.+ |++|+||||||+..             |.+.+++|+.|+++++|
T Consensus        83 ~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  161 (297)
T 1d7o_A           83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDF-GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHH-SCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cchhhhhhhhhccccccccCHHHHHHHHHHHHHHc-CCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHH
Confidence                 22    2        567899999999999 89999999999742             24568899999887753

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.67  E-value=4.7e-17  Score=114.68  Aligned_cols=101  Identities=18%  Similarity=0.110  Sum_probs=80.1

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc-CCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .+++++||||+|+||++++++|+++|++|++++|+.....+..+.+... +..+.++.+|++|++++.+++++      +
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------~   77 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA------H   77 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH------S
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc------c
Confidence            4678999999999999999999999999999999765544444444332 56788999999999999998875      5


Q ss_pred             cccEEEecCCCCCc-------cceeeeeccceecc
Q 033396           91 KLNILVSSAQLPYS-------QRKFFVKSRGPYGS  118 (120)
Q Consensus        91 ~id~li~~ag~~~~-------~~~~~~n~~g~~~~  118 (120)
                      ++|+||||||....       ...+++|+.+++++
T Consensus        78 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l  112 (341)
T 3enk_A           78 PITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSL  112 (341)
T ss_dssp             CCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHH
T ss_pred             CCcEEEECccccccCccccChHHHHHHHHHHHHHH
Confidence            79999999998752       24456677666554

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.67  E-value=1.7e-18  Score=118.10  Aligned_cols=89  Identities=17%  Similarity=0.110  Sum_probs=74.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      |+++||||++|||++++++|+++|++|++++|+.+..+.             .+.+|++++++++++++++   . +++|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------------~~~~Dl~~~~~v~~~~~~~---~-~~id   64 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------------DLSTAEGRKQAIADVLAKC---S-KGMD   64 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------CTTSHHHHHHHHHHHHTTC---T-TCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-------------ccccCCCCHHHHHHHHHHh---C-CCCC
Confidence            589999999999999999999999999999998644211             1578999999888887643   3 7899


Q ss_pred             EEEecCCCCC----ccceeeeeccceeccc
Q 033396           94 ILVSSAQLPY----SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        94 ~li~~ag~~~----~~~~~~~n~~g~~~~~  119 (120)
                      +||||||+..    ++..+++|+.|+++++
T Consensus        65 ~lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~   94 (257)
T 1fjh_A           65 GLVLCAGLGPQTKVLGNVVSVNYFGATELM   94 (257)
T ss_dssp             EEEECCCCCTTCSSHHHHHHHHTHHHHHHH
T ss_pred             EEEECCCCCCCcccHHHHHHHhhHHHHHHH
Confidence            9999999876    4677899999988765

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.66  E-value=1.4e-16  Score=113.28  Aligned_cols=100  Identities=20%  Similarity=0.207  Sum_probs=83.0

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHC-CC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAF-GA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~-g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      ++++|+++||||+|+||++++++|++. |+ +|++++|++.........+.  ...+.++.+|++|++++.+++      
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~------   89 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN--DPRMRFFIGDVRDLERLNYAL------   89 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC--CTTEEEEECCTTCHHHHHHHT------
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc--CCCEEEEECCCCCHHHHHHHH------
Confidence            478999999999999999999999999 97 99999999877665555543  356889999999999888777      


Q ss_pred             cCCcccEEEecCCCCC-------ccceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPY-------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~-------~~~~~~~n~~g~~~~~  119 (120)
                        .++|+|||+||...       +...+++|+.|+.+++
T Consensus        90 --~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~  126 (344)
T 2gn4_A           90 --EGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVI  126 (344)
T ss_dssp             --TTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred             --hcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHH
Confidence              46899999999875       2456788888887664

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.66  E-value=4.5e-17  Score=109.89  Aligned_cols=96  Identities=20%  Similarity=0.243  Sum_probs=73.6

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeE-EEEeccCCCHHHHHHHHHHHHh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQV-SGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      ...+++++++||||+|+||++++++|+++|++|++++|++...++...      ..+ .++.+|++         +++.+
T Consensus        16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~------~~~~~~~~~Dl~---------~~~~~   80 (236)
T 3e8x_A           16 NLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE------RGASDIVVANLE---------EDFSH   80 (236)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH------TTCSEEEECCTT---------SCCGG
T ss_pred             ccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh------CCCceEEEcccH---------HHHHH
Confidence            356899999999999999999999999999999999999877654332      146 78899998         33344


Q ss_pred             hcCCcccEEEecCCCCC---ccceeeeeccceeccc
Q 033396           87 QFDGKLNILVSSAQLPY---SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~---~~~~~~~n~~g~~~~~  119 (120)
                      .+ +++|+||||||...   +...+++|+.++++++
T Consensus        81 ~~-~~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~  115 (236)
T 3e8x_A           81 AF-ASIDAVVFAAGSGPHTGADKTILIDLWGAIKTI  115 (236)
T ss_dssp             GG-TTCSEEEECCCCCTTSCHHHHHHTTTHHHHHHH
T ss_pred             HH-cCCCEEEECCCCCCCCCccccchhhHHHHHHHH
Confidence            55 78999999999876   3566788888877654

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.66  E-value=7.2e-17  Score=106.51  Aligned_cols=82  Identities=26%  Similarity=0.269  Sum_probs=70.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   94 (120)
                      +++||||+++||++++++|+ +|++|++++|+..                 .+.+|++++++++++++++     +++|+
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~-----~~~d~   61 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------------DVTVDITNIDSIKKMYEQV-----GKVDA   61 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------------SEECCTTCHHHHHHHHHHH-----CCEEE
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------------ceeeecCCHHHHHHHHHHh-----CCCCE
Confidence            69999999999999999999 9999999999863                 4679999999999988765     78999


Q ss_pred             EEecCCCCCc-----------cceeeeeccceeccc
Q 033396           95 LVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        95 li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      ||||||+...           .+.+++|+.|+++++
T Consensus        62 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~   97 (202)
T 3d7l_A           62 IVSATGSATFSPLTELTPEKNAVTISSKLGGQINLV   97 (202)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHH
Confidence            9999997642           245678888887664

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.66  E-value=1.4e-15  Score=109.50  Aligned_cols=92  Identities=21%  Similarity=0.152  Sum_probs=79.9

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHH-HCCCEEEEeeCChH------------HHHHHHHHHHhcCCeEEEEeccCCCHHHH
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELA-AFGAIVHTCSRNET------------ELNQRIQEWKSKGLQVSGNACDLKIRAQR   77 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~-~~g~~v~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   77 (120)
                      ..+|++||||+++|||++.+..|+ +.|+.++++.+..+            ......+.+++.|.....+.||+++++.+
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i  127 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIK  127 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHH
Confidence            468999999999999999999998 68899888876432            23345566777799999999999999999


Q ss_pred             HHHHHHHHhhcCCcccEEEecCCCCC
Q 033396           78 EKLMETVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        78 ~~~~~~~~~~~~g~id~li~~ag~~~  103 (120)
                      +++++++++.+ |+||+||||++...
T Consensus       128 ~~vi~~i~~~~-G~IDiLVhS~A~~~  152 (401)
T 4ggo_A          128 AQVIEEAKKKG-IKFDLIVYSLASPV  152 (401)
T ss_dssp             HHHHHHHHHTT-CCEEEEEECCCCSE
T ss_pred             HHHHHHHHHhc-CCCCEEEEeccccc
Confidence            99999999999 99999999999875

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.63  E-value=1.5e-16  Score=111.76  Aligned_cols=103  Identities=17%  Similarity=0.188  Sum_probs=81.5

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc-CCeEEEE-eccCCCHHHHHHHHHHHHh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGN-ACDLKIRAQREKLMETVSS   86 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~D~~~~~~~~~~~~~~~~   86 (120)
                      ..+++++++||||+|+||++++++|+++|++|++++|+......+.+.+... +.++.++ .+|++|++++.+++     
T Consensus         7 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-----   81 (342)
T 1y1p_A            7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI-----   81 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT-----
T ss_pred             cCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHH-----
Confidence            3478899999999999999999999999999999999877665554444332 3567777 89999988776665     


Q ss_pred             hcCCcccEEEecCCCCC----ccceeeeeccceeccc
Q 033396           87 QFDGKLNILVSSAQLPY----SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~----~~~~~~~n~~g~~~~~  119 (120)
                         .++|+|||+||...    +...+++|+.|+.+++
T Consensus        82 ---~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll  115 (342)
T 1y1p_A           82 ---KGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNAL  115 (342)
T ss_dssp             ---TTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHH
T ss_pred             ---cCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence               46899999999875    3455678888776654

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.62  E-value=7.8e-17  Score=114.73  Aligned_cols=105  Identities=15%  Similarity=0.069  Sum_probs=78.8

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHH--CCCEEEEeeCChHHHHH---HH----HHHHhcCCeEEEEeccCCCHHHHH
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAA--FGAIVHTCSRNETELNQ---RI----QEWKSKGLQVSGNACDLKIRAQRE   78 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~--~g~~v~~~~~~~~~~~~---~~----~~~~~~~~~~~~~~~D~~~~~~~~   78 (120)
                      .+++++++++||||+|+||++++++|++  .|++|++++|+......   ..    ......+..+.++.+|+++++++.
T Consensus         5 ~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   84 (362)
T 3sxp_A            5 DDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLR   84 (362)
T ss_dssp             SCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHH
T ss_pred             chhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHH
Confidence            3567899999999999999999999999  99999999986541100   00    001112456788999999999887


Q ss_pred             HHHHHHHhhcCCcccEEEecCCCCC-----ccceeeeeccceeccc
Q 033396           79 KLMETVSSQFDGKLNILVSSAQLPY-----SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        79 ~~~~~~~~~~~g~id~li~~ag~~~-----~~~~~~~n~~g~~~~~  119 (120)
                      ++      .. .++|+|||+||+..     +...+++|+.|+.+++
T Consensus        85 ~~------~~-~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll  123 (362)
T 3sxp_A           85 RL------EK-LHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLL  123 (362)
T ss_dssp             HH------TT-SCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHH
T ss_pred             Hh------hc-cCCCEEEECCccCCccccCHHHHHHHHHHHHHHHH
Confidence            76      12 68999999999765     2456788888877664

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.62  E-value=4.2e-16  Score=109.67  Aligned_cols=101  Identities=21%  Similarity=0.118  Sum_probs=78.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHH-HHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN-QRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      ++++++||||+|+||++++++|+++|++|++++|+..... .....+. ....+.++.+|++|++++.++++.+      
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~------   74 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELG-IENDVKIIHMDLLEFSNIIRTIEKV------   74 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTT-CTTTEEECCCCTTCHHHHHHHHHHH------
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhcc-ccCceeEEECCCCCHHHHHHHHHhc------
Confidence            5789999999999999999999999999999999764421 1122221 1346888999999999998888654      


Q ss_pred             cccEEEecCCCCC-------ccceeeeeccceeccc
Q 033396           91 KLNILVSSAQLPY-------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        91 ~id~li~~ag~~~-------~~~~~~~n~~g~~~~~  119 (120)
                      ++|+||||||...       +...+++|+.|+++++
T Consensus        75 ~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~  110 (345)
T 2z1m_A           75 QPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRIL  110 (345)
T ss_dssp             CCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHH
T ss_pred             CCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHH
Confidence            5899999999864       3456788888887664

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.60  E-value=6.5e-15  Score=102.52  Aligned_cols=98  Identities=20%  Similarity=0.222  Sum_probs=79.8

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++++|+++|||++||+|+++++.|++.|++|++++|+.+..++..+++.... .+.++.+|+++++++.+++        
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~-~~~~~~~D~~~~~~~~~~~--------  186 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-KVNVTAAETADDASRAEAV--------  186 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-TCCCEEEECCSHHHHHHHT--------
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEecCCCHHHHHHHH--------
Confidence            4688999999999999999999999999999999999888777777665421 2456778999998877766        


Q ss_pred             CcccEEEecCCCCC-------------ccceeeeecccee
Q 033396           90 GKLNILVSSAQLPY-------------SQRKFFVKSRGPY  116 (120)
Q Consensus        90 g~id~li~~ag~~~-------------~~~~~~~n~~g~~  116 (120)
                      ..+|+||||+|+..             +...+++|+.+++
T Consensus       187 ~~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          187 KGAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             TTCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             HhCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence            45899999997532             1346899999987

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.60  E-value=3.6e-16  Score=110.18  Aligned_cols=101  Identities=16%  Similarity=0.091  Sum_probs=78.7

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +.++++++++||||+|+||++++++|+++|++|++++|+.....+....    -..+.++.+|++|++++.++++++   
T Consensus        15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----l~~v~~~~~Dl~d~~~~~~~~~~~---   87 (330)
T 2pzm_A           15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPP----VAGLSVIEGSVTDAGLLERAFDSF---   87 (330)
T ss_dssp             CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCS----CTTEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhc----cCCceEEEeeCCCHHHHHHHHhhc---
Confidence            4568899999999999999999999999999999999965332111111    145788999999999998888653   


Q ss_pred             cCCcccEEEecCCCCCc-----cceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPYS-----QRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----~~~~~~n~~g~~~~~  119 (120)
                         ++|+||||||....     .. +++|+.|+++++
T Consensus        88 ---~~D~vih~A~~~~~~~~~~~~-~~~N~~~~~~l~  120 (330)
T 2pzm_A           88 ---KPTHVVHSAAAYKDPDDWAED-AATNVQGSINVA  120 (330)
T ss_dssp             ---CCSEEEECCCCCSCTTCHHHH-HHHHTHHHHHHH
T ss_pred             ---CCCEEEECCccCCCccccChh-HHHHHHHHHHHH
Confidence               68999999998653     12 677888877654

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.59  E-value=6.7e-17  Score=109.60  Aligned_cols=89  Identities=22%  Similarity=0.198  Sum_probs=73.5

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      |+++||||+++||++++++|+++|++|++++|+....+.             .+.+|+++++++++++++.   . +++|
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------------~~~~D~~~~~~~~~~~~~~---~-~~~d   64 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------------DLSTPGGRETAVAAVLDRC---G-GVLD   64 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------CTTSHHHHHHHHHHHHHHH---T-TCCS
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------------cccCCcccHHHHHHHHHHc---C-CCcc
Confidence            579999999999999999999999999999998644210             1578999999988888754   2 6899


Q ss_pred             EEEecCCCCC----ccceeeeeccceeccc
Q 033396           94 ILVSSAQLPY----SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        94 ~li~~ag~~~----~~~~~~~n~~g~~~~~  119 (120)
                      +||||||+..    +...+++|+.|+++++
T Consensus        65 ~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~   94 (255)
T 2dkn_A           65 GLVCCAGVGVTAANSGLVVAVNYFGVSALL   94 (255)
T ss_dssp             EEEECCCCCTTSSCHHHHHHHHTHHHHHHH
T ss_pred             EEEECCCCCCcchhHHHHHHHHhHHHHHHH
Confidence            9999999876    3566888998887764

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.59  E-value=1.3e-15  Score=107.68  Aligned_cols=103  Identities=17%  Similarity=0.099  Sum_probs=79.5

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc-----CCeEEEEeccCCCHHHHHHHHHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-----GLQVSGNACDLKIRAQREKLMET   83 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~   83 (120)
                      +++.+++++||||+|+||++++++|+++|++|+.++|...........+...     ...+.++.+|++|++++.+++  
T Consensus        21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--   98 (351)
T 3ruf_A           21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVM--   98 (351)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHT--
T ss_pred             CCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh--
Confidence            4568899999999999999999999999999999999754333333333322     157889999999999888777  


Q ss_pred             HHhhcCCcccEEEecCCCCCc-------cceeeeeccceeccc
Q 033396           84 VSSQFDGKLNILVSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        84 ~~~~~~g~id~li~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                            .++|+|||+||....       ...+++|+.++.+++
T Consensus        99 ------~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll  135 (351)
T 3ruf_A           99 ------KGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNIL  135 (351)
T ss_dssp             ------TTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHH
T ss_pred             ------cCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHH
Confidence                  479999999998652       345677777766543

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.58  E-value=9.1e-16  Score=108.86  Aligned_cols=102  Identities=16%  Similarity=0.128  Sum_probs=80.0

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      +++++++||||+|+||++++++|+++|++|++++|+..........+. .+..+.++.+|+++++++.++++..      
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~------   79 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREF------   79 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHH------
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc-cCCceEEEEccccCHHHHHHHHHhc------
Confidence            578899999999999999999999999999999997654333333222 2456788999999999988888653      


Q ss_pred             cccEEEecCCCCC-------ccceeeeeccceeccc
Q 033396           91 KLNILVSSAQLPY-------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        91 ~id~li~~ag~~~-------~~~~~~~n~~g~~~~~  119 (120)
                      ++|+|||+||...       +...+++|+.|+.+++
T Consensus        80 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~  115 (357)
T 1rkx_A           80 QPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLL  115 (357)
T ss_dssp             CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHH
T ss_pred             CCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHH
Confidence            5899999999754       2355778888877654

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.57  E-value=1.2e-15  Score=101.84  Aligned_cols=88  Identities=13%  Similarity=0.156  Sum_probs=73.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCC-HHHHHHHHHHHHhhcCCccc
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKI-RAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~g~id   93 (120)
                      +++||||+|+||++++++|+++|++|++++|++......        ..+.++.+|++| ++++.+++        .++|
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~--------~~~d   65 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--------NNVKAVHFDVDWTPEEMAKQL--------HGMD   65 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--------TTEEEEECCTTSCHHHHHTTT--------TTCS
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--------CCceEEEecccCCHHHHHHHH--------cCCC
Confidence            589999999999999999999999999999987653211        468899999999 88877776        5799


Q ss_pred             EEEecCCCCCccceeeeeccceeccc
Q 033396           94 ILVSSAQLPYSQRKFFVKSRGPYGSI  119 (120)
Q Consensus        94 ~li~~ag~~~~~~~~~~n~~g~~~~~  119 (120)
                      +||||+|.... ..+++|+.++.+++
T Consensus        66 ~vi~~ag~~~~-~~~~~n~~~~~~l~   90 (219)
T 3dqp_A           66 AIINVSGSGGK-SLLKVDLYGAVKLM   90 (219)
T ss_dssp             EEEECCCCTTS-SCCCCCCHHHHHHH
T ss_pred             EEEECCcCCCC-CcEeEeHHHHHHHH
Confidence            99999998874 47788888876654

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.57  E-value=3.5e-15  Score=100.76  Aligned_cols=77  Identities=17%  Similarity=0.072  Sum_probs=65.0

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHC--CCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAF--GAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+++++||||+|+||++++++|+++  |++|++++|++...++.       +..+.++.+|++|++++.+++        
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~--------   67 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------GGEADVFIGDITDADSINPAF--------   67 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------TCCTTEEECCTTSHHHHHHHH--------
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-------CCCeeEEEecCCCHHHHHHHH--------
Confidence            4688999999999999999999999  89999999987654322       345668899999999888887        


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                      .++|+||||+|...
T Consensus        68 ~~~d~vi~~a~~~~   81 (253)
T 1xq6_A           68 QGIDALVILTSAVP   81 (253)
T ss_dssp             TTCSEEEECCCCCC
T ss_pred             cCCCEEEEeccccc
Confidence            46899999999764

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.57  E-value=3.8e-15  Score=104.90  Aligned_cols=99  Identities=12%  Similarity=0.035  Sum_probs=76.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      ++++||||+|+||++++++|++.|++|++++|.. .........+.. ..++.++.+|++|++++.++++.      .++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~------~~~   74 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITK------YMP   74 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHH------HCC
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc-CCceEEEEcCCCCHHHHHHHHhc------cCC
Confidence            4699999999999999999999999999998753 222222333433 24578889999999999888865      259


Q ss_pred             cEEEecCCCCC-------ccceeeeeccceeccc
Q 033396           93 NILVSSAQLPY-------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        93 d~li~~ag~~~-------~~~~~~~n~~g~~~~~  119 (120)
                      |+|||+||...       +...+++|+.|+.+++
T Consensus        75 d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~  108 (347)
T 1orr_A           75 DSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLL  108 (347)
T ss_dssp             SEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred             CEEEECCcccChhhhhhCHHHHHHHHHHHHHHHH
Confidence            99999999865       2456778888877654

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.57  E-value=5.5e-15  Score=106.08  Aligned_cols=102  Identities=14%  Similarity=0.104  Sum_probs=77.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHH-HCCCEEEEeeCChHH---------HHHHHHHHHhc-----CCe---EEEEeccCCCH
Q 033396           13 GMTALVTGGTKGIGYAVVEELA-AFGAIVHTCSRNETE---------LNQRIQEWKSK-----GLQ---VSGNACDLKIR   74 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~-~~g~~v~~~~~~~~~---------~~~~~~~~~~~-----~~~---~~~~~~D~~~~   74 (120)
                      +++++||||+|+||++++++|+ +.|++|++++|....         .+.+.+.+...     ...   +.++.+|++++
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            3579999999999999999999 999999999986533         23332222222     123   78899999999


Q ss_pred             HHHHHHHHHHHhhcCCcccEEEecCCCCCc-------cceeeeeccceeccc
Q 033396           75 AQREKLMETVSSQFDGKLNILVSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        75 ~~~~~~~~~~~~~~~g~id~li~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                      +++.+++++    + +++|+||||||....       ...+++|+.|+++++
T Consensus        82 ~~~~~~~~~----~-~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll  128 (397)
T 1gy8_A           82 DFLNGVFTR----H-GPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLL  128 (397)
T ss_dssp             HHHHHHHHH----S-CCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHh----c-CCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHH
Confidence            988887764    3 569999999998752       346778888877654

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.56  E-value=4.9e-17  Score=109.80  Aligned_cols=96  Identities=10%  Similarity=0.099  Sum_probs=74.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .+.+|+++||||+|+||++++++|+++|+  +|++++|++.......      ...+.++.+|++|++++.+++      
T Consensus        15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~------~~~~~~~~~D~~d~~~~~~~~------   82 (242)
T 2bka_A           15 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA------YKNVNQEVVDFEKLDDYASAF------   82 (242)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG------GGGCEEEECCGGGGGGGGGGG------
T ss_pred             hhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc------cCCceEEecCcCCHHHHHHHh------
Confidence            36789999999999999999999999999  9999999865432110      124678899999988877666      


Q ss_pred             cCCcccEEEecCCCCCc----cceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPYS----QRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~----~~~~~~n~~g~~~~~  119 (120)
                        .++|+||||||....    ...+++|+.++++++
T Consensus        83 --~~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~  116 (242)
T 2bka_A           83 --QGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSA  116 (242)
T ss_dssp             --SSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHH
T ss_pred             --cCCCEEEECCCcccccCCcccceeeeHHHHHHHH
Confidence              579999999998652    355677777766543

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.56  E-value=3.2e-15  Score=98.23  Aligned_cols=92  Identities=14%  Similarity=0.064  Sum_probs=71.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      +++++||||+|+||++++++|+++|++|++++|++.....      .....+.++.+|++|++++.+++        ..+
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~D~~~~~~~~~~~--------~~~   68 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS------EGPRPAHVVVGDVLQAADVDKTV--------AGQ   68 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS------SSCCCSEEEESCTTSHHHHHHHH--------TTC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccc------ccCCceEEEEecCCCHHHHHHHH--------cCC
Confidence            3789999999999999999999999999999998755321      01446788999999999888877        468


Q ss_pred             cEEEecCCCCCccceeeeeccceecc
Q 033396           93 NILVSSAQLPYSQRKFFVKSRGPYGS  118 (120)
Q Consensus        93 d~li~~ag~~~~~~~~~~n~~g~~~~  118 (120)
                      |++||++|........++|+.++.++
T Consensus        69 d~vi~~a~~~~~~~~~~~n~~~~~~~   94 (206)
T 1hdo_A           69 DAVIVLLGTRNDLSPTTVMSEGARNI   94 (206)
T ss_dssp             SEEEECCCCTTCCSCCCHHHHHHHHH
T ss_pred             CEEEECccCCCCCCccchHHHHHHHH
Confidence            99999999876433345565555443

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.56  E-value=1.7e-15  Score=107.43  Aligned_cols=103  Identities=15%  Similarity=0.045  Sum_probs=79.0

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChH----HHHHHHHHHHhc-CCeEEEEeccCCCHHHHHHHHHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET----ELNQRIQEWKSK-GLQVSGNACDLKIRAQREKLMET   83 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~   83 (120)
                      +++++++++||||+|+||++++++|+++|++|++++|+..    .+....+.+... +..+.++.+|++|++++.+++  
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--  100 (352)
T 1sb8_A           23 LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC--  100 (352)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH--
T ss_pred             cCccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHh--
Confidence            3467889999999999999999999999999999998653    233333222211 246888999999999888877  


Q ss_pred             HHhhcCCcccEEEecCCCCC-------ccceeeeeccceeccc
Q 033396           84 VSSQFDGKLNILVSSAQLPY-------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        84 ~~~~~~g~id~li~~ag~~~-------~~~~~~~n~~g~~~~~  119 (120)
                            .++|+|||+||...       +...+++|+.++.+++
T Consensus       101 ------~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~  137 (352)
T 1sb8_A          101 ------AGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNML  137 (352)
T ss_dssp             ------TTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHH
T ss_pred             ------cCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHH
Confidence                  46999999999864       2355677888776654

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.56  E-value=7.6e-16  Score=108.61  Aligned_cols=101  Identities=15%  Similarity=0.068  Sum_probs=74.6

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ..+++++++||||+|+||++++++|+++|++|++++|+.....+.   +... ..+.++.+|++|++++.++++.     
T Consensus        17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---l~~~-~~~~~~~~Dl~d~~~~~~~~~~-----   87 (333)
T 2q1w_A           17 RGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH---LKDH-PNLTFVEGSIADHALVNQLIGD-----   87 (333)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---SCCC-TTEEEEECCTTCHHHHHHHHHH-----
T ss_pred             ecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh---Hhhc-CCceEEEEeCCCHHHHHHHHhc-----
Confidence            346788999999999999999999999999999999975321110   1111 3678899999999998888864     


Q ss_pred             CCcccEEEecCCCCCcc----ceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYSQ----RKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~~----~~~~~n~~g~~~~~  119 (120)
                       +++|+||||||.....    ..+++|+.++.+++
T Consensus        88 -~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~  121 (333)
T 2q1w_A           88 -LQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVV  121 (333)
T ss_dssp             -HCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHH
T ss_pred             -cCCcEEEECceecCCCccCChHHHHHHHHHHHHH
Confidence             3699999999986531    11677887776654

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.56  E-value=2.7e-15  Score=105.88  Aligned_cols=101  Identities=20%  Similarity=0.201  Sum_probs=76.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH------HHHHHHHHHh-cCCeEEEEeccCCCHHHHHHHHHHHH
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE------LNQRIQEWKS-KGLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      +|+++||||+|+||++++++|+++|++|++++|....      ..+..+.+.. .+..+.++.+|+++++++.+++++  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~--   79 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK--   79 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH--
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHh--
Confidence            4689999999999999999999999999999875321      1112222322 245678889999999988888864  


Q ss_pred             hhcCCcccEEEecCCCCC-------ccceeeeeccceeccc
Q 033396           86 SQFDGKLNILVSSAQLPY-------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~-------~~~~~~~n~~g~~~~~  119 (120)
                          .++|+|||+||...       +...+++|+.|+.+++
T Consensus        80 ----~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~  116 (348)
T 1ek6_A           80 ----YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLL  116 (348)
T ss_dssp             ----CCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred             ----cCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHH
Confidence                26999999999864       2355677887776654

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.56  E-value=1.6e-15  Score=107.12  Aligned_cols=94  Identities=17%  Similarity=0.107  Sum_probs=71.8

Q ss_pred             cccccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHH
Q 033396            6 EKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus         6 ~~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      ..+...++|+++||||+|+||.+++++|+++|++|++++|+...            ..+.++.+|++|++++.+++    
T Consensus        12 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------------~~~~~~~~Dl~d~~~~~~~~----   75 (347)
T 4id9_A           12 SGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------------TGGEEVVGSLEDGQALSDAI----   75 (347)
T ss_dssp             ---------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------------SCCSEEESCTTCHHHHHHHH----
T ss_pred             CcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------------CCccEEecCcCCHHHHHHHH----
Confidence            33456788999999999999999999999999999999998643            34668899999999888887    


Q ss_pred             hhcCCcccEEEecCCCCCc-----cceeeeeccceeccc
Q 033396           86 SQFDGKLNILVSSAQLPYS-----QRKFFVKSRGPYGSI  119 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~~-----~~~~~~n~~g~~~~~  119 (120)
                          .++|+|||+|+....     ...+++|+.|+.+++
T Consensus        76 ----~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll  110 (347)
T 4id9_A           76 ----MGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLL  110 (347)
T ss_dssp             ----TTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHH
T ss_pred             ----hCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHH
Confidence                479999999998763     455677877776653

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.55  E-value=5e-14  Score=94.03  Aligned_cols=77  Identities=10%  Similarity=0.050  Sum_probs=65.9

Q ss_pred             cEEEEecCCCchHHHHHHHHH-HCCCEEEEeeCChH-HHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           14 MTALVTGGTKGIGYAVVEELA-AFGAIVHTCSRNET-ELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~-~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      |+++||||+|+||++++++|+ +.|++|++++|++. .++++.    ..+..+.++.+|++|++++.+++        .+
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~--------~~   73 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----IDHERVTVIEGSFQNPGXLEQAV--------TN   73 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HTSTTEEEEECCTTCHHHHHHHH--------TT
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cCCCceEEEECCCCCHHHHHHHH--------cC
Confidence            679999999999999999999 89999999999977 544332    23567889999999999988888        46


Q ss_pred             ccEEEecCCCC
Q 033396           92 LNILVSSAQLP  102 (120)
Q Consensus        92 id~li~~ag~~  102 (120)
                      +|+||||+|..
T Consensus        74 ~d~vv~~ag~~   84 (221)
T 3r6d_A           74 AEVVFVGAMES   84 (221)
T ss_dssp             CSEEEESCCCC
T ss_pred             CCEEEEcCCCC
Confidence            89999999973

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.54  E-value=2.5e-15  Score=105.07  Aligned_cols=94  Identities=19%  Similarity=0.145  Sum_probs=75.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ..+.++++||||+|+||++++++|+++|++|++++|+... ..    +     .+.++.+|++|++++.++++.      
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-----~~~~~~~Dl~d~~~~~~~~~~------   72 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-----NVEMISLDIMDSQRVKKVISD------   72 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-----TEEEEECCTTCHHHHHHHHHH------
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-----eeeEEECCCCCHHHHHHHHHh------
Confidence            3577899999999999999999999999999999998653 11    1     577889999999999888865      


Q ss_pred             CcccEEEecCCCCC-------ccceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPY-------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~-------~~~~~~~n~~g~~~~~  119 (120)
                      +++|+|||+||...       +...+++|+.|+.+++
T Consensus        73 ~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~  109 (321)
T 2pk3_A           73 IKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVL  109 (321)
T ss_dssp             HCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHH
Confidence            46999999999865       3456788888877654

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.54  E-value=6.1e-15  Score=104.94  Aligned_cols=100  Identities=18%  Similarity=0.157  Sum_probs=71.7

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHH-HHHHHHHHh----cCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETEL-NQRIQEWKS----KGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      |+++||||+|+||++++++|+++|++|++++|+.... .+..+.+..    .+..+.++.+|++|++++.++++.+    
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   77 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV----   77 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc----
Confidence            6799999999999999999999999999999976431 111122211    2356888999999999998888653    


Q ss_pred             CCcccEEEecCCCCCc-------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                        ++|+||||||....       ...+++|+.|+.+++
T Consensus        78 --~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~  113 (372)
T 1db3_A           78 --QPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLL  113 (372)
T ss_dssp             --CCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHH
T ss_pred             --CCCEEEECCcccCccccccCHHHHHHHHHHHHHHHH
Confidence              58999999998652       244678888877654

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.54  E-value=2.4e-15  Score=106.09  Aligned_cols=99  Identities=17%  Similarity=0.213  Sum_probs=79.3

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCC-------CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHH
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFG-------AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKL   80 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   80 (120)
                      ...+++++++||||+|+||.+++++|+++|       ++|++++|+......      ..+..+.++.+|++|++++.++
T Consensus         9 ~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~   82 (342)
T 2hrz_A            9 NLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------GFSGAVDARAADLSAPGEAEKL   82 (342)
T ss_dssp             CSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------TCCSEEEEEECCTTSTTHHHHH
T ss_pred             CCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------ccCCceeEEEcCCCCHHHHHHH
Confidence            445788999999999999999999999999       799999987543211      1345788899999999988887


Q ss_pred             HHHHHhhcCCcccEEEecCCCCC------ccceeeeeccceeccc
Q 033396           81 METVSSQFDGKLNILVSSAQLPY------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        81 ~~~~~~~~~g~id~li~~ag~~~------~~~~~~~n~~g~~~~~  119 (120)
                      ++       +++|+|||+||...      +...+++|+.|+.+++
T Consensus        83 ~~-------~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~  120 (342)
T 2hrz_A           83 VE-------ARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLF  120 (342)
T ss_dssp             HH-------TCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHH
T ss_pred             Hh-------cCCCEEEECCccCcccccccHHHHHHHHHHHHHHHH
Confidence            74       36999999999865      3455788888887654

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.54  E-value=4.9e-15  Score=104.35  Aligned_cols=100  Identities=17%  Similarity=0.072  Sum_probs=74.0

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc---CCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK---GLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .++++++||||+|+||++++++|+++|++|+.+.|+........ .+...   ...+.++.+|++|++++.+++      
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~------   75 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVK-HLLDLPKAETHLTLWKADLADEGSFDEAI------   75 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHH-HHHTSTTHHHHEEEEECCTTSTTTTHHHH------
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHH-HHHhcccCCCeEEEEEcCCCCHHHHHHHH------
Confidence            46789999999999999999999999999999888765332221 11111   135788899999998888777      


Q ss_pred             cCCcccEEEecCCCCCc------cceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPYS------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~------~~~~~~n~~g~~~~~  119 (120)
                        ..+|+|||+|+....      ...+++|+.|+.+++
T Consensus        76 --~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll  111 (337)
T 2c29_D           76 --KGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIM  111 (337)
T ss_dssp             --TTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHH
T ss_pred             --cCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHH
Confidence              468999999987542      135778888887654

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.53  E-value=2e-14  Score=103.28  Aligned_cols=104  Identities=15%  Similarity=0.134  Sum_probs=76.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHH----------------HHHHHH-HhcCCeEEEEeccCC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN----------------QRIQEW-KSKGLQVSGNACDLK   72 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~----------------~~~~~~-~~~~~~~~~~~~D~~   72 (120)
                      ..++..++||||+|+||++++++|+++|++|++++|......                +....+ ...+..+.++.+|++
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~   87 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDIC   87 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTT
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCC
Confidence            367889999999999999999999999999999998653311                111111 112456788999999


Q ss_pred             CHHHHHHHHHHHHhhcCCcccEEEecCCCCCcc----------ceeeeeccceeccc
Q 033396           73 IRAQREKLMETVSSQFDGKLNILVSSAQLPYSQ----------RKFFVKSRGPYGSI  119 (120)
Q Consensus        73 ~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~----------~~~~~n~~g~~~~~  119 (120)
                      +++++.++++..      ++|+||||||.....          ..+++|+.|+.+++
T Consensus        88 d~~~~~~~~~~~------~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll  138 (404)
T 1i24_A           88 DFEFLAESFKSF------EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVL  138 (404)
T ss_dssp             SHHHHHHHHHHH------CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHhcc------CCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHH
Confidence            999988888653      589999999986521          25678888887654

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.52  E-value=8.7e-15  Score=103.02  Aligned_cols=99  Identities=17%  Similarity=0.128  Sum_probs=72.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh-cCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      +++||||+|+||++++++|+++|++|+++++.........+.+.. .+.++.++.+|+++++++.++++.      .++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------~~~D   75 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD------HAID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH------TTCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhc------cCCC
Confidence            589999999999999999999999999987642111111112222 144577889999999988888764      2599


Q ss_pred             EEEecCCCCCc-------cceeeeeccceeccc
Q 033396           94 ILVSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        94 ~li~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                      +||||||....       ...+++|+.|+++++
T Consensus        76 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~  108 (338)
T 1udb_A           76 TVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLI  108 (338)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred             EEEECCccCccccchhcHHHHHHHHHHHHHHHH
Confidence            99999998642       345677888776654

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.52  E-value=5.8e-15  Score=105.61  Aligned_cols=100  Identities=19%  Similarity=0.116  Sum_probs=74.7

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH-----HHHHHHHHHhcCC-eEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-----LNQRIQEWKSKGL-QVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      |+++||||+|+||.+++++|++.|++|++++|+...     ++.....+...+. .+.++.+|++|++++.++++.+   
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence            689999999999999999999999999999987543     2211111111123 6888999999999988888653   


Q ss_pred             cCCcccEEEecCCCCCc-------cceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                         ++|+|||+||....       ...+++|+.|+.+++
T Consensus       106 ---~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~  141 (381)
T 1n7h_A          106 ---KPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLL  141 (381)
T ss_dssp             ---CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHH
T ss_pred             ---CCCEEEECCcccCccccccCHHHHHHHHHHHHHHHH
Confidence               58999999998752       355778888877654

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.51  E-value=1.2e-14  Score=102.15  Aligned_cols=101  Identities=17%  Similarity=0.065  Sum_probs=75.7

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHH-HHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN-QRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .+++++||||+|+||.+++++|+++|++|++++|+..... ...+.+. ....+.++.+|++|++++.++++..      
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~------   85 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA------   85 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH------
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc-ccCceEEEECCCCCHHHHHHHHHHc------
Confidence            4678999999999999999999999999999999754310 1111111 2346788899999999998888653      


Q ss_pred             cccEEEecCCCCCc-------cceeeeeccceeccc
Q 033396           91 KLNILVSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        91 ~id~li~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                      ++|+|||+||....       ...+++|+.|+.+++
T Consensus        86 ~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~  121 (335)
T 1rpn_A           86 QPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLL  121 (335)
T ss_dssp             CCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHH
T ss_pred             CCCEEEECccccchhhhhhChHHHHHHHHHHHHHHH
Confidence            58999999998652       345678888776654

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.50  E-value=9.8e-15  Score=97.59  Aligned_cols=90  Identities=10%  Similarity=0.085  Sum_probs=70.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      ++++||||+|+||++++++|+++|++|++++|++....       .....+.++.+|++|++++.+++        .++|
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~--------~~~d   69 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIK-------IENEHLKVKKADVSSLDEVCEVC--------KGAD   69 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCC-------CCCTTEEEECCCTTCHHHHHHHH--------TTCS
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccch-------hccCceEEEEecCCCHHHHHHHh--------cCCC
Confidence            57999999999999999999999999999999876532       11357889999999999988888        4689


Q ss_pred             EEEecCCCCCc-cceeeeeccceecc
Q 033396           94 ILVSSAQLPYS-QRKFFVKSRGPYGS  118 (120)
Q Consensus        94 ~li~~ag~~~~-~~~~~~n~~g~~~~  118 (120)
                      +|||++|.... ...+++|+.++.++
T Consensus        70 ~vi~~a~~~~~~~~~~~~n~~~~~~l   95 (227)
T 3dhn_A           70 AVISAFNPGWNNPDIYDETIKVYLTI   95 (227)
T ss_dssp             EEEECCCC------CCSHHHHHHHHH
T ss_pred             EEEEeCcCCCCChhHHHHHHHHHHHH
Confidence            99999998643 23566676665544

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.49  E-value=5.9e-15  Score=103.73  Aligned_cols=97  Identities=16%  Similarity=0.090  Sum_probs=73.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCC--CEEEEeeCChH--HHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNET--ELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++++||||+|+||++++++|+++|  ++|++++|...  ..+.. .++. .+..+.++.+|++|++++.+++       
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~-------   73 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE-DDPRYTFVKGDVADYELVKELV-------   73 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT-TCTTEEEEECCTTCHHHHHHHH-------
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc-cCCceEEEEcCCCCHHHHHHHh-------
Confidence            4579999999999999999999986  89999988642  11111 1111 1456888999999999888887       


Q ss_pred             CCcccEEEecCCCCC-------ccceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPY-------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~-------~~~~~~~n~~g~~~~~  119 (120)
                       +++|+|||+||...       +...+++|+.|+.+++
T Consensus        74 -~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~  110 (336)
T 2hun_A           74 -RKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLL  110 (336)
T ss_dssp             -HTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHH
T ss_pred             -hCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHH
Confidence             46899999999864       3456788888877654

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.49  E-value=5.9e-15  Score=104.18  Aligned_cols=104  Identities=13%  Similarity=0.050  Sum_probs=73.4

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCC--CEEEEeeCChHH-HHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETE-LNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      +++.+++++||||+|+||.+++++|+++|  .+|+..++.... .......+ .....+.++.+|++|++++.++++.  
T Consensus        20 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~--   96 (346)
T 4egb_A           20 FQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSI-QDHPNYYFVKGEIQNGELLEHVIKE--   96 (346)
T ss_dssp             ----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHH--
T ss_pred             cccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhh-ccCCCeEEEEcCCCCHHHHHHHHhh--
Confidence            45788899999999999999999999999  678887775421 11111111 1135788999999999999988865  


Q ss_pred             hhcCCcccEEEecCCCCCc-------cceeeeeccceeccc
Q 033396           86 SQFDGKLNILVSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                          .++|+|||+||....       ...+++|+.|+.+++
T Consensus        97 ----~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll  133 (346)
T 4egb_A           97 ----RDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLL  133 (346)
T ss_dssp             ----HTCCEEEECCCCC---------CHHHHHHTHHHHHHH
T ss_pred             ----cCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHH
Confidence                258999999998652       345677777766543

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.49  E-value=6.2e-15  Score=102.98  Aligned_cols=98  Identities=16%  Similarity=0.060  Sum_probs=71.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeC-ChHH---HHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETE---LNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +|+++||||+|+||++++++|+++|++|+++.| ++..   .... ..+.....++.++.+|++|++++.+++       
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~-------   72 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFL-TNLPGASEKLHFFNADLSNPDSFAAAI-------   72 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHH-HTSTTHHHHEEECCCCTTCGGGGHHHH-------
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHH-HhhhccCCceEEEecCCCCHHHHHHHH-------
Confidence            578999999999999999999999999999888 5432   1111 111111135778899999999888877       


Q ss_pred             CCcccEEEecCCCCCc------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~------~~~~~~n~~g~~~~~  119 (120)
                       ..+|+|||+|+....      ...+++|+.|+++++
T Consensus        73 -~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~  108 (322)
T 2p4h_X           73 -EGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGIL  108 (322)
T ss_dssp             -TTCSEEEECCCCC--------CHHHHHHHHHHHHHH
T ss_pred             -cCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHH
Confidence             468999999976431      236788888887764

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.49  E-value=1.5e-14  Score=103.21  Aligned_cols=100  Identities=19%  Similarity=0.086  Sum_probs=74.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH-----HHHHHHHHHh-cCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-----LNQRIQEWKS-KGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      ++++||||+|+||.+++++|+++|++|++++|+...     ++.....+.. .+..+.++.+|++|++++.++++.+   
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence            689999999999999999999999999999987532     1111111110 2346788999999999988888653   


Q ss_pred             cCCcccEEEecCCCCCc-------cceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                         ++|+||||||....       ...+++|+.|+.+++
T Consensus       102 ---~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~  137 (375)
T 1t2a_A          102 ---KPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLL  137 (375)
T ss_dssp             ---CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHH
T ss_pred             ---CCCEEEECCCcccccccccCHHHHHHHHHHHHHHHH
Confidence               58999999998652       345778888877654

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.49  E-value=4.2e-14  Score=94.25  Aligned_cols=86  Identities=17%  Similarity=0.209  Sum_probs=66.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   94 (120)
                      .++||||+|+||++++++|+++|++|++++|++..+...      ....+.++.+|++|+++  +.+        +++|+
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~~~~~~~D~~d~~~--~~~--------~~~d~   65 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR------LGATVATLVKEPLVLTE--ADL--------DSVDA   65 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH------TCTTSEEEECCGGGCCH--HHH--------TTCSE
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc------cCCCceEEecccccccH--hhc--------ccCCE
Confidence            489999999999999999999999999999998765432      13457888999999886  222        67999


Q ss_pred             EEecCCCCCccceeeeecccee
Q 033396           95 LVSSAQLPYSQRKFFVKSRGPY  116 (120)
Q Consensus        95 li~~ag~~~~~~~~~~n~~g~~  116 (120)
                      ||||+|.........+|+.++.
T Consensus        66 vi~~ag~~~~~~~~~~n~~~~~   87 (224)
T 3h2s_A           66 VVDALSVPWGSGRGYLHLDFAT   87 (224)
T ss_dssp             EEECCCCCTTSSCTHHHHHHHH
T ss_pred             EEECCccCCCcchhhHHHHHHH
Confidence            9999999633223344554443

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.49  E-value=6e-15  Score=107.23  Aligned_cols=100  Identities=12%  Similarity=0.084  Sum_probs=74.1

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChH---HHHHHHHHHHh---------cCCeEEEEeccCCCHHHHH
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET---ELNQRIQEWKS---------KGLQVSGNACDLKIRAQRE   78 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~---~~~~~~~~~~~---------~~~~~~~~~~D~~~~~~~~   78 (120)
                      ..+++++||||+|+||++++++|++.|++|++++|+..   ..+.+.+.+..         .+.++.++.+|+++++++.
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  146 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  146 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence            45779999999999999999999999999999999865   33333333322         2467899999999987766


Q ss_pred             HHHHHHHhhcCCcccEEEecCCCCC----ccceeeeeccceeccc
Q 033396           79 KLMETVSSQFDGKLNILVSSAQLPY----SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        79 ~~~~~~~~~~~g~id~li~~ag~~~----~~~~~~~n~~g~~~~~  119 (120)
                              .+ +++|+||||||...    +...+++|+.|+.+++
T Consensus       147 --------~~-~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~  182 (427)
T 4f6c_A          147 --------LP-ENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVI  182 (427)
T ss_dssp             --------CS-SCCSEEEECCCCC-------CHHHHHHHHHHHHH
T ss_pred             --------Cc-CCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHH
Confidence                    33 78999999999865    3566788888877664

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.48  E-value=2.2e-14  Score=109.95  Aligned_cols=106  Identities=20%  Similarity=0.142  Sum_probs=76.1

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh-cCCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KGLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      ++.+++++++||||+|+||++++++|+++|++|++++|.........+.+.. .+..+.++.+|+++++++.+++++   
T Consensus         6 ~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~---   82 (699)
T 1z45_A            6 QSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKE---   82 (699)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHH---
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHh---
Confidence            3457789999999999999999999999999999999865322112222221 134567889999999988888764   


Q ss_pred             hcCCcccEEEecCCCCCc-------cceeeeeccceeccc
Q 033396           87 QFDGKLNILVSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                         -++|+|||+||....       ...+++|+.++.+++
T Consensus        83 ---~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll  119 (699)
T 1z45_A           83 ---YKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLL  119 (699)
T ss_dssp             ---SCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred             ---CCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHH
Confidence               268999999998762       245677777766553

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.48  E-value=1.7e-14  Score=101.56  Aligned_cols=98  Identities=18%  Similarity=0.091  Sum_probs=73.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHH--HHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN--QRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      +|+++||||+|+||++++++|+++|++|+++.|+.....  .....+. ....+.++.+|++|++++.+++        .
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~--------~   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPI--------A   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHH--------T
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHH--------c
Confidence            688999999999999999999999999998888754321  1111222 2345778899999998887777        4


Q ss_pred             cccEEEecCCCCCc------cceeeeeccceeccc
Q 033396           91 KLNILVSSAQLPYS------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        91 ~id~li~~ag~~~~------~~~~~~n~~g~~~~~  119 (120)
                      ++|+|||+|+....      .+.+++|+.|+++++
T Consensus        80 ~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll  114 (338)
T 2rh8_A           80 GCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVM  114 (338)
T ss_dssp             TCSEEEEESSCCCC---------CHHHHHHHHHHH
T ss_pred             CCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHH
Confidence            58999999987532      236788998887764

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.47  E-value=1.8e-14  Score=102.69  Aligned_cols=97  Identities=14%  Similarity=0.116  Sum_probs=76.4

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCC-CHHHHHHHHHHHHhh
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLK-IRAQREKLMETVSSQ   87 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~   87 (120)
                      .+..++++||||+|+||.+++++|+++ |++|++++|+........     ....+.++.+|++ +++.+.++++     
T Consensus        21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~~d~~~~~~~~~-----   90 (372)
T 3slg_A           21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV-----KHERMHFFEGDITINKEWVEYHVK-----   90 (372)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG-----GSTTEEEEECCTTTCHHHHHHHHH-----
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc-----cCCCeEEEeCccCCCHHHHHHHhc-----
Confidence            366789999999999999999999998 899999999875432221     1346889999999 9998888884     


Q ss_pred             cCCcccEEEecCCCCCc-------cceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                         ++|+|||+|+....       ...+++|+.++.+++
T Consensus        91 ---~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll  126 (372)
T 3slg_A           91 ---KCDVILPLVAIATPATYVKQPLRVFELDFEANLPIV  126 (372)
T ss_dssp             ---HCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHH
T ss_pred             ---cCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHH
Confidence               58999999998763       345678888776653

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.46  E-value=1.8e-14  Score=101.41  Aligned_cols=92  Identities=15%  Similarity=0.069  Sum_probs=68.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      ++++||||+|+||++++++|+++|++|++++|+....+.    +..  ..+.++.+|++|++++.+++        .++|
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~~--~~~~~~~~Dl~d~~~~~~~~--------~~~d   79 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR----LAY--LEPECRVAEMLDHAGLERAL--------RGLD   79 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG----GGG--GCCEEEECCTTCHHHHHHHT--------TTCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh----hcc--CCeEEEEecCCCHHHHHHHH--------cCCC
Confidence            479999999999999999999999999999997654321    111  24678899999998888777        4689


Q ss_pred             EEEecCCCCC-----ccceeeeeccceeccc
Q 033396           94 ILVSSAQLPY-----SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        94 ~li~~ag~~~-----~~~~~~~n~~g~~~~~  119 (120)
                      +|||+||...     +...+++|+.++.+++
T Consensus        80 ~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~  110 (342)
T 2x4g_A           80 GVIFSAGYYPSRPRRWQEEVASALGQTNPFY  110 (342)
T ss_dssp             EEEEC------------CHHHHHHHHHHHHH
T ss_pred             EEEECCccCcCCCCCHHHHHHHHHHHHHHHH
Confidence            9999999754     3455677887776654

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.46  E-value=1.3e-13  Score=101.92  Aligned_cols=102  Identities=22%  Similarity=0.167  Sum_probs=75.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHC---CCEEEEeeCChHHHHH---HHHHH-----------Hh-cCCeEEEEeccC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAF---GAIVHTCSRNETELNQ---RIQEW-----------KS-KGLQVSGNACDL   71 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~---g~~v~~~~~~~~~~~~---~~~~~-----------~~-~~~~~~~~~~D~   71 (120)
                      ..++++++||||+|+||.+++++|++.   |++|++++|+......   +.+.+           .. ...++.++.+|+
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl  149 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK  149 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence            357899999999999999999999998   8999999997643321   11111           11 136799999999


Q ss_pred             C------CHHHHHHHHHHHHhhcCCcccEEEecCCCCCc---cceeeeeccceeccc
Q 033396           72 K------IRAQREKLMETVSSQFDGKLNILVSSAQLPYS---QRKFFVKSRGPYGSI  119 (120)
Q Consensus        72 ~------~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~---~~~~~~n~~g~~~~~  119 (120)
                      +      +.+.+.+++        .++|+||||||...+   ...+++|+.|+.+++
T Consensus       150 ~~~~~gld~~~~~~~~--------~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll  198 (478)
T 4dqv_A          150 SEPDLGLDQPMWRRLA--------ETVDLIVDSAAMVNAFPYHELFGPNVAGTAELI  198 (478)
T ss_dssp             TSGGGGCCHHHHHHHH--------HHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHH
T ss_pred             CCcccCCCHHHHHHHH--------cCCCEEEECccccCCcCHHHHHHHHHHHHHHHH
Confidence            8      555666665        358999999999764   455677888776654

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.46  E-value=1.4e-14  Score=103.74  Aligned_cols=98  Identities=14%  Similarity=0.087  Sum_probs=76.2

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .+++++++||||+|+||.+++++|+++| ++|++++|+.....+   .+. ....+.++.+|+++++++.+++       
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~-~~~~v~~~~~Dl~d~~~l~~~~-------   97 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP-DHPAVRFSETSITDDALLASLQ-------   97 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC-CCTTEEEECSCTTCHHHHHHCC-------
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc-CCCceEEEECCCCCHHHHHHHh-------
Confidence            3678899999999999999999999999 999999997543210   011 1456888999999998777665       


Q ss_pred             CCcccEEEecCCCCCc-------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                       .++|+|||+||....       ...+++|+.++.+++
T Consensus        98 -~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll  134 (377)
T 2q1s_A           98 -DEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLY  134 (377)
T ss_dssp             -SCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHH
T ss_pred             -hCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHH
Confidence             479999999998752       345677887776654

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.46  E-value=1.9e-14  Score=101.99  Aligned_cols=97  Identities=18%  Similarity=0.158  Sum_probs=75.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHC-CCEEEEeeCChH--HHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           15 TALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNET--ELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~-g~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .++||||+|+||++++++|++. |++|++++|...  ..+.+ .++. .+..+.++.+|++|++++.+++++      ++
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~------~~   73 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS-ESNRYNFEHADICDSAEITRIFEQ------YQ   73 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT-TCTTEEEEECCTTCHHHHHHHHHH------HC
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh-cCCCeEEEECCCCCHHHHHHHHhh------cC
Confidence            4899999999999999999998 799999998642  11111 1111 145688899999999999888865      37


Q ss_pred             ccEEEecCCCCC-------ccceeeeeccceeccc
Q 033396           92 LNILVSSAQLPY-------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        92 id~li~~ag~~~-------~~~~~~~n~~g~~~~~  119 (120)
                      +|+||||||...       +...+++|+.|+++++
T Consensus        74 ~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~  108 (361)
T 1kew_A           74 PDAVMHLAAESHVDRSITGPAAFIETNIVGTYALL  108 (361)
T ss_dssp             CSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHH
T ss_pred             CCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHH
Confidence            999999999875       3456788888887764

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.46  E-value=4.6e-14  Score=98.92  Aligned_cols=94  Identities=16%  Similarity=0.120  Sum_probs=73.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      ++++||||+|+||++++++|+++|++|++++|......   +   .....+.++.+|+++++++.+++++      .++|
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~---~~~~~~~~~~~D~~~~~~~~~~~~~------~~~d   69 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---D---AITEGAKFYNGDLRDKAFLRDVFTQ------ENIE   69 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---G---GSCTTSEEEECCTTCHHHHHHHHHH------SCEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---h---hcCCCcEEEECCCCCHHHHHHHHhh------cCCC
Confidence            47999999999999999999999999999998653321   1   1122577889999999998888865      4799


Q ss_pred             EEEecCCCCCc-------cceeeeeccceeccc
Q 033396           94 ILVSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        94 ~li~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                      +|||+||....       ...+++|+.++.+++
T Consensus        70 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~  102 (330)
T 2c20_A           70 AVMHFAADSLVGVSMEKPLQYYNNNVYGALCLL  102 (330)
T ss_dssp             EEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred             EEEECCcccCccccccCHHHHHHHHhHHHHHHH
Confidence            99999998752       345677777766553

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.45  E-value=4.3e-14  Score=98.58  Aligned_cols=87  Identities=15%  Similarity=0.102  Sum_probs=50.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      +++++||||+|+||++++++|+++|++|++++|+...           . .  ++.+|+++++++.++++..      ++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~-~--~~~~Dl~d~~~~~~~~~~~------~~   61 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------P-K--FEQVNLLDSNAVHHIIHDF------QP   61 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------------CHHHHHHH------CC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------C-C--eEEecCCCHHHHHHHHHhh------CC
Confidence            5789999999999999999999999999999986533           1 1  6678999998888888653      58


Q ss_pred             cEEEecCCCCC-------ccceeeeeccceeccc
Q 033396           93 NILVSSAQLPY-------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        93 d~li~~ag~~~-------~~~~~~~n~~g~~~~~  119 (120)
                      |+|||+||...       +...+++|+.|+.+++
T Consensus        62 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~   95 (315)
T 2ydy_A           62 HVIVHCAAERRPDVVENQPDAASQLNVDASGNLA   95 (315)
T ss_dssp             SEEEECC-------------------CHHHHHHH
T ss_pred             CEEEECCcccChhhhhcCHHHHHHHHHHHHHHHH
Confidence            99999999854       3567889999887764

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.45  E-value=2.8e-14  Score=102.28  Aligned_cols=96  Identities=13%  Similarity=0.061  Sum_probs=74.6

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ....++++||||+|+||++++++|+++|++|++++|+......      .....+.++.+|++|++++.+++        
T Consensus        26 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~v~~~~~Dl~d~~~~~~~~--------   91 (379)
T 2c5a_A           26 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT------EDMFCDEFHLVDLRVMENCLKVT--------   91 (379)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC------GGGTCSEEEECCTTSHHHHHHHH--------
T ss_pred             cccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchh------hccCCceEEECCCCCHHHHHHHh--------
Confidence            3456799999999999999999999999999999997643211      01235678899999999888877        


Q ss_pred             CcccEEEecCCCCC--------ccceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPY--------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~--------~~~~~~~n~~g~~~~~  119 (120)
                      .++|+|||+||...        +...+++|+.|+.+++
T Consensus        92 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll  129 (379)
T 2c5a_A           92 EGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMI  129 (379)
T ss_dssp             TTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHH
Confidence            46899999999754        2345677877776654

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.44  E-value=2.3e-13  Score=91.85  Aligned_cols=79  Identities=14%  Similarity=0.041  Sum_probs=65.8

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      +..|+++||||+|+||++++++|+++| ++|++++|++..+.+.      ....+.++.+|++|++++.+++        
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~--------   86 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP------YPTNSQIIMGDVLNHAALKQAM--------   86 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS------CCTTEEEEECCTTCHHHHHHHH--------
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc------ccCCcEEEEecCCCHHHHHHHh--------
Confidence            345789999999999999999999999 8999999987654211      2346889999999999988888        


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                      ..+|+||||+|...
T Consensus        87 ~~~D~vv~~a~~~~  100 (236)
T 3qvo_A           87 QGQDIVYANLTGED  100 (236)
T ss_dssp             TTCSEEEEECCSTT
T ss_pred             cCCCEEEEcCCCCc
Confidence            46899999999755

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.42  E-value=5.3e-14  Score=99.25  Aligned_cols=96  Identities=19%  Similarity=0.130  Sum_probs=73.6

Q ss_pred             cEEEEecCCCchHHHHHHHHHHC--CCEEEEeeCChHH-HHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           14 MTALVTGGTKGIGYAVVEELAAF--GAIVHTCSRNETE-LNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~--g~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      ++++||||+|+||++++++|+++  |++|++++|.... ..+...++  ....+.++.+|++|++++.+++        .
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~--------~   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKLA--------A   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHH--------T
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh--ccCCeEEEECCCCCHHHHHHHh--------h
Confidence            57999999999999999999998  8999999986421 11111111  1356888999999999888877        4


Q ss_pred             cccEEEecCCCCC-------ccceeeeeccceeccc
Q 033396           91 KLNILVSSAQLPY-------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        91 ~id~li~~ag~~~-------~~~~~~~n~~g~~~~~  119 (120)
                      .+|+|||+||...       +...+++|+.|+.+++
T Consensus        75 ~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~  110 (348)
T 1oc2_A           75 KADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLL  110 (348)
T ss_dssp             TCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHH
T ss_pred             cCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHH
Confidence            5799999999875       3456788888877654

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.41  E-value=3.1e-14  Score=97.49  Aligned_cols=89  Identities=18%  Similarity=0.197  Sum_probs=71.7

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      |+++||||+|+||++++++|++.|++|++++|+.....         ...+.++.+|++|++++.+++        .++|
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~--------~~~d   65 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA---------EAHEEIVACDLADAQAVHDLV--------KDCD   65 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC---------CTTEEECCCCTTCHHHHHHHH--------TTCS
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc---------CCCccEEEccCCCHHHHHHHH--------cCCC
Confidence            57999999999999999999999999999999764310         124678899999999888877        4689


Q ss_pred             EEEecCCCCCc---cceeeeeccceeccc
Q 033396           94 ILVSSAQLPYS---QRKFFVKSRGPYGSI  119 (120)
Q Consensus        94 ~li~~ag~~~~---~~~~~~n~~g~~~~~  119 (120)
                      +||||||....   ...+++|+.++.+++
T Consensus        66 ~vi~~a~~~~~~~~~~~~~~n~~~~~~l~   94 (267)
T 3ay3_A           66 GIIHLGGVSVERPWNDILQANIIGAYNLY   94 (267)
T ss_dssp             EEEECCSCCSCCCHHHHHHHTHHHHHHHH
T ss_pred             EEEECCcCCCCCCHHHHHHHHHHHHHHHH
Confidence            99999998642   455677887776654

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.41  E-value=2.9e-14  Score=99.39  Aligned_cols=93  Identities=24%  Similarity=0.167  Sum_probs=72.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   94 (120)
                      +++||||+|+||++++++|+++|++|++++|......      ......+.++.+|+++++++.+++++      .++|+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~------~~~~~~~~~~~~Dl~~~~~~~~~~~~------~~~d~   69 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR------ENVPKGVPFFRVDLRDKEGVERAFRE------FRPTH   69 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG------GGSCTTCCEECCCTTCHHHHHHHHHH------HCCSE
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch------hhcccCeEEEECCCCCHHHHHHHHHh------cCCCE
Confidence            5899999999999999999999999999988532210      01113456788999999998888864      26899


Q ss_pred             EEecCCCCC-------ccceeeeeccceeccc
Q 033396           95 LVSSAQLPY-------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        95 li~~ag~~~-------~~~~~~~n~~g~~~~~  119 (120)
                      +||+|+...       +...+++|+.|+++++
T Consensus        70 vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~  101 (311)
T 2p5y_A           70 VSHQAAQASVKVSVEDPVLDFEVNLLGGLNLL  101 (311)
T ss_dssp             EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHH
T ss_pred             EEECccccCchhhhhCHHHHHHHHHHHHHHHH
Confidence            999999865       2456788888887664

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.40  E-value=3.5e-13  Score=93.97  Aligned_cols=87  Identities=18%  Similarity=0.118  Sum_probs=68.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      ++++||||+|+||++++++|+++|++|+.++|++....  ..       .+.++.+|++ ++++.+++        .++|
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~-------~~~~~~~Dl~-~~~~~~~~--------~~~d   64 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--IN-------DYEYRVSDYT-LEDLINQL--------NDVD   64 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------------CCEEEECCCC-HHHHHHHT--------TTCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--CC-------ceEEEEcccc-HHHHHHhh--------cCCC
Confidence            67999999999999999999999999999999843322  11       5778899999 88887777        5799


Q ss_pred             EEEecCCCCC---ccceeeeeccceecc
Q 033396           94 ILVSSAQLPY---SQRKFFVKSRGPYGS  118 (120)
Q Consensus        94 ~li~~ag~~~---~~~~~~~n~~g~~~~  118 (120)
                      +|||+|+...   +...+++|+.++.++
T Consensus        65 ~Vih~a~~~~~~~~~~~~~~n~~~~~~l   92 (311)
T 3m2p_A           65 AVVHLAATRGSQGKISEFHDNEILTQNL   92 (311)
T ss_dssp             EEEECCCCCCSSSCGGGTHHHHHHHHHH
T ss_pred             EEEEccccCCCCChHHHHHHHHHHHHHH
Confidence            9999999874   345566777666554

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.40  E-value=1.3e-13  Score=97.04  Aligned_cols=96  Identities=16%  Similarity=0.045  Sum_probs=72.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHC---C---CEEEEeeCChHH-HHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           15 TALVTGGTKGIGYAVVEELAAF---G---AIVHTCSRNETE-LNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~---g---~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +++||||+|+||++++++|+++   |   ++|++++|.... ..+....+. .+..+.++.+|++|++++.+++      
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~------   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD-ADPRLRFVHGDIRDAGLLAREL------   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT-TCTTEEEEECCTTCHHHHHHHT------
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcc-cCCCeEEEEcCCCCHHHHHHHh------
Confidence            5899999999999999999997   7   899999985421 000111111 1356888999999998887776      


Q ss_pred             cCCcccEEEecCCCCC-------ccceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPY-------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~-------~~~~~~~n~~g~~~~~  119 (120)
                        .++|+|||+||...       +...+++|+.|+.+++
T Consensus        75 --~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~  111 (337)
T 1r6d_A           75 --RGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLL  111 (337)
T ss_dssp             --TTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHH
T ss_pred             --cCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHH
Confidence              57999999999865       3456778888776654

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.39  E-value=1.3e-12  Score=86.71  Aligned_cols=72  Identities=18%  Similarity=0.143  Sum_probs=60.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   94 (120)
                      .++||||+|+||++++++|+++|++|++++|++..+....       ..+.++.+|++|+++  +.+        +++|+
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~~~~~~D~~d~~~--~~~--------~~~d~   64 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-------KDINILQKDIFDLTL--SDL--------SDQNV   64 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-------SSSEEEECCGGGCCH--HHH--------TTCSE
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-------CCCeEEeccccChhh--hhh--------cCCCE
Confidence            5899999999999999999999999999999986654321       457789999999886  233        67999


Q ss_pred             EEecCCCCC
Q 033396           95 LVSSAQLPY  103 (120)
Q Consensus        95 li~~ag~~~  103 (120)
                      ||||+|...
T Consensus        65 vi~~ag~~~   73 (221)
T 3ew7_A           65 VVDAYGISP   73 (221)
T ss_dssp             EEECCCSST
T ss_pred             EEECCcCCc
Confidence            999999864

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.39  E-value=1.1e-12  Score=92.80  Aligned_cols=83  Identities=14%  Similarity=0.053  Sum_probs=64.6

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh----HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE----TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      +..++++||||+|+||++++++|++.|++|++++|+.    .... ....+..  ..+.++.+|++|++++.+++++   
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~~---   81 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK-IFKALED--KGAIIVYGLINEQEAMEKILKE---   81 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHHHHHH--TTCEEEECCTTCHHHHHHHHHH---
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH-HHHHHHh--CCcEEEEeecCCHHHHHHHHhh---
Confidence            3456899999999999999999999999999999976    2222 2223332  3567889999999999988865   


Q ss_pred             hcCCcccEEEecCCCC
Q 033396           87 QFDGKLNILVSSAQLP  102 (120)
Q Consensus        87 ~~~g~id~li~~ag~~  102 (120)
                         .++|+|||+++..
T Consensus        82 ---~~~d~Vi~~a~~~   94 (346)
T 3i6i_A           82 ---HEIDIVVSTVGGE   94 (346)
T ss_dssp             ---TTCCEEEECCCGG
T ss_pred             ---CCCCEEEECCchh
Confidence               3799999999974

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.37  E-value=1.1e-13  Score=98.13  Aligned_cols=95  Identities=15%  Similarity=0.083  Sum_probs=73.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCC-----CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFG-----AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g-----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +++++||||+|+||++++++|+++|     ++|++++|+.....       .....+.++.+|++|++++.++++.    
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~~----   69 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-------HEDNPINYVQCDISDPDDSQAKLSP----   69 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-------CCSSCCEEEECCTTSHHHHHHHHTT----
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-------cccCceEEEEeecCCHHHHHHHHhc----
Confidence            4679999999999999999999999     99999999764321       1234677889999999888777642    


Q ss_pred             cCCcccEEEecCCCCC--ccceeeeeccceeccc
Q 033396           88 FDGKLNILVSSAQLPY--SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        88 ~~g~id~li~~ag~~~--~~~~~~~n~~g~~~~~  119 (120)
                      . +++|+|||+||...  +...+++|+.++.+++
T Consensus        70 ~-~~~d~vih~a~~~~~~~~~~~~~n~~~~~~l~  102 (364)
T 2v6g_A           70 L-TDVTHVFYVTWANRSTEQENCEANSKMFRNVL  102 (364)
T ss_dssp             C-TTCCEEEECCCCCCSSHHHHHHHHHHHHHHHH
T ss_pred             C-CCCCEEEECCCCCcchHHHHHHHhHHHHHHHH
Confidence            1 24999999999875  3445677777766543

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.36  E-value=3.4e-13  Score=93.13  Aligned_cols=81  Identities=17%  Similarity=0.229  Sum_probs=67.7

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      ..++++||||+|+||++++++|+++|++|++++|+                     .+|++|++++.+++++.      +
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~Dl~d~~~~~~~~~~~------~   63 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------------------DLDITNVLAVNKFFNEK------K   63 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT---------------------TCCTTCHHHHHHHHHHH------C
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc---------------------cCCCCCHHHHHHHHHhc------C
Confidence            56789999999999999999999999999999986                     37999999988888653      6


Q ss_pred             ccEEEecCCCCC-------ccceeeeeccceeccc
Q 033396           92 LNILVSSAQLPY-------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        92 id~li~~ag~~~-------~~~~~~~n~~g~~~~~  119 (120)
                      +|+|||+||...       +...+++|+.|+.+++
T Consensus        64 ~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~   98 (292)
T 1vl0_A           64 PNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLA   98 (292)
T ss_dssp             CSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHH
T ss_pred             CCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHH
Confidence            899999999865       2455778888876654

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.36  E-value=7.2e-12  Score=86.93  Aligned_cols=80  Identities=20%  Similarity=0.162  Sum_probs=63.7

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh-------HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHH
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-------TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      .++++||||+|+||++++++|++.|++|++++|+.       ...+. ..++...  .+.++.+|++|++++.+++    
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~l~~~--~v~~v~~D~~d~~~l~~~~----   74 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEEL-IDNYQSL--GVILLEGDINDHETLVKAI----   74 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHH-HHHHHHT--TCEEEECCTTCHHHHHHHH----
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHH-HHHHHhC--CCEEEEeCCCCHHHHHHHH----
Confidence            35699999999999999999999999999999986       33332 2333333  3667899999999888877    


Q ss_pred             hhcCCcccEEEecCCCCC
Q 033396           86 SQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~  103 (120)
                          .++|+|||++|...
T Consensus        75 ----~~~d~vi~~a~~~~   88 (307)
T 2gas_A           75 ----KQVDIVICAAGRLL   88 (307)
T ss_dssp             ----TTCSEEEECSSSSC
T ss_pred             ----hCCCEEEECCcccc
Confidence                46999999999754

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.34  E-value=1.9e-13  Score=95.01  Aligned_cols=93  Identities=14%  Similarity=0.101  Sum_probs=71.5

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHC--CCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAF--GAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      +++++||||+|+||.+++++|+++  |++|++++|+..... ..    .   .+.++.+|++|++++.+++++      .
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~----~---~~~~~~~D~~d~~~~~~~~~~------~   67 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VV----N---SGPFEVVNALDFNQIEHLVEV------H   67 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HH----H---SSCEEECCTTCHHHHHHHHHH------T
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-cc----C---CCceEEecCCCHHHHHHHHhh------c
Confidence            367999999999999999999998  899999998764421 11    1   245788999999998888864      2


Q ss_pred             cccEEEecCCCCC------ccceeeeeccceeccc
Q 033396           91 KLNILVSSAQLPY------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        91 ~id~li~~ag~~~------~~~~~~~n~~g~~~~~  119 (120)
                      ++|+|||+||...      +...+++|+.++.+++
T Consensus        68 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~  102 (312)
T 2yy7_A           68 KITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVL  102 (312)
T ss_dssp             TCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEECCccCCCchhhChHHHHHHHHHHHHHHH
Confidence            6899999999864      2345677777766543

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.34  E-value=3.7e-13  Score=94.63  Aligned_cols=93  Identities=16%  Similarity=0.104  Sum_probs=70.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCH-HHHHHHHHHHHhhcCCc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR-AQREKLMETVSSQFDGK   91 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~g~   91 (120)
                      ++++||||+|+||++++++|+++ |++|++++|+........     ....+.++.+|+++. +.+.++++        +
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~--------~   67 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK--------K   67 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHHH--------H
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-----cCCCeEEEeccccCcHHHHHhhcc--------C
Confidence            36999999999999999999998 899999999865532211     134688899999984 45666663        5


Q ss_pred             ccEEEecCCCCCc-------cceeeeeccceeccc
Q 033396           92 LNILVSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        92 id~li~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                      +|+|||+||....       ...+++|+.++.+++
T Consensus        68 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~  102 (345)
T 2bll_A           68 CDVVLPLVAIATPIEYTRNPLRVFELDFEENLRII  102 (345)
T ss_dssp             CSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHH
T ss_pred             CCEEEEcccccCccchhcCHHHHHHHHHHHHHHHH
Confidence            8999999998652       345677777766543

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.33  E-value=9.7e-14  Score=98.47  Aligned_cols=100  Identities=14%  Similarity=0.154  Sum_probs=70.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .+++++++||||+|+||.+++++|++.| ++|++++|+.....  ...+.  .  +. +.+|+++++.+.++++.  ..+
T Consensus        43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~--~--~~-~~~d~~~~~~~~~~~~~--~~~  113 (357)
T 2x6t_A           43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV--D--LN-IADYMDKEDFLIQIMAG--EEF  113 (357)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGTT--T--SC-CSEEEEHHHHHHHHHTT--CCC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhccc--C--ce-EeeecCcHHHHHHHHhh--ccc
Confidence            3567899999999999999999999999 99999998754321  01111  1  11 67899998887777653  124


Q ss_pred             CCcccEEEecCCCCCc-----cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-----QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----~~~~~~n~~g~~~~~  119 (120)
                       +++|+|||+||....     ...+++|+.|+.+++
T Consensus       114 -~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll  148 (357)
T 2x6t_A          114 -GDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELL  148 (357)
T ss_dssp             -SSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHH
T ss_pred             -CCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHH
Confidence             589999999998652     345678888876654

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.33  E-value=6e-13  Score=91.59  Aligned_cols=75  Identities=17%  Similarity=0.133  Sum_probs=61.5

Q ss_pred             cEEEEecCCCchHHHHHHHHHHC--CCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAF--GAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      |+++||||+|+||++++++|+++  |++|++++|+........    .  ..+.++.+|++|++++.+++        .+
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~d~~~l~~~~--------~~   66 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D--QGVEVRHGDYNQPESLQKAF--------AG   66 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H--TTCEEEECCTTCHHHHHHHT--------TT
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h--cCCeEEEeccCCHHHHHHHH--------hc
Confidence            45899999999999999999998  999999999875543222    1  24668889999998888777        46


Q ss_pred             ccEEEecCCCC
Q 033396           92 LNILVSSAQLP  102 (120)
Q Consensus        92 id~li~~ag~~  102 (120)
                      +|+|||+++..
T Consensus        67 ~d~vi~~a~~~   77 (287)
T 2jl1_A           67 VSKLLFISGPH   77 (287)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEEcCCCC
Confidence            89999999974

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.33  E-value=7.2e-14  Score=97.25  Aligned_cols=90  Identities=19%  Similarity=0.164  Sum_probs=68.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      ++++||||+|+||++++++|+++|++|++++|+.......      ....+.++.+|++|++ +.+++        .. |
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~Dl~d~~-~~~~~--------~~-d   64 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF------VNPSAELHVRDLKDYS-WGAGI--------KG-D   64 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG------SCTTSEEECCCTTSTT-TTTTC--------CC-S
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh------cCCCceEEECccccHH-HHhhc--------CC-C
Confidence            4699999999999999999999999999999876432111      1345778899999977 55444        33 9


Q ss_pred             EEEecCCCCCc-------cceeeeeccceeccc
Q 033396           94 ILVSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        94 ~li~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                      +|||+||....       ...+++|+.|+.+++
T Consensus        65 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~   97 (312)
T 3ko8_A           65 VVFHFAANPEVRLSTTEPIVHFNENVVATFNVL   97 (312)
T ss_dssp             EEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCchhhhhCHHHHHHHHHHHHHHHH
Confidence            99999997542       345677887776654

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.33  E-value=2.1e-13  Score=95.13  Aligned_cols=87  Identities=20%  Similarity=0.215  Sum_probs=69.3

Q ss_pred             EEEecCCCchHHHHHHHHHHC--CCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           16 ALVTGGTKGIGYAVVEELAAF--GAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      ++||||+|+||++++++|+++  |++|++++|+.....           .+.++.+|++|++++.+++++      .++|
T Consensus         2 vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----------~~~~~~~D~~d~~~~~~~~~~------~~~d   64 (317)
T 3ajr_A            2 ILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----------GIKFITLDVSNRDEIDRAVEK------YSID   64 (317)
T ss_dssp             EEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----------TCCEEECCTTCHHHHHHHHHH------TTCC
T ss_pred             EEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----------CceEEEecCCCHHHHHHHHhh------cCCc
Confidence            799999999999999999998  789999988653321           245778999999998888864      3699


Q ss_pred             EEEecCCCCC------ccceeeeeccceeccc
Q 033396           94 ILVSSAQLPY------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        94 ~li~~ag~~~------~~~~~~~n~~g~~~~~  119 (120)
                      +|||+|+...      +...+++|+.|+.+++
T Consensus        65 ~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~   96 (317)
T 3ajr_A           65 AIFHLAGILSAKGEKDPALAYKVNMNGTYNIL   96 (317)
T ss_dssp             EEEECCCCCHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred             EEEECCcccCCccccChHHHhhhhhHHHHHHH
Confidence            9999999864      2445677777776654

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.32  E-value=1.9e-11  Score=85.43  Aligned_cols=79  Identities=19%  Similarity=0.270  Sum_probs=62.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh-----HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-----TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ++++||||+|+||++++++|++.|++|++++|+.     ....+....+..  ..+.++.+|++|++++.+++       
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~--~~v~~v~~D~~d~~~l~~a~-------   75 (321)
T 3c1o_A            5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS--MGVTIIEGEMEEHEKMVSVL-------   75 (321)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH--TTCEEEECCTTCHHHHHHHH-------
T ss_pred             cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc--CCcEEEEecCCCHHHHHHHH-------
Confidence            4699999999999999999999999999999985     222222223322  23678899999999888887       


Q ss_pred             CCcccEEEecCCCC
Q 033396           89 DGKLNILVSSAQLP  102 (120)
Q Consensus        89 ~g~id~li~~ag~~  102 (120)
                       ..+|+|||+++..
T Consensus        76 -~~~d~vi~~a~~~   88 (321)
T 3c1o_A           76 -KQVDIVISALPFP   88 (321)
T ss_dssp             -TTCSEEEECCCGG
T ss_pred             -cCCCEEEECCCcc
Confidence             4689999999864

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.31  E-value=9.3e-12  Score=86.99  Aligned_cols=79  Identities=22%  Similarity=0.289  Sum_probs=62.6

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      ++++||||+|+||++++++|+++|++|++++|+.........++...  .+.++.+|++|++++.+++        ..+|
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~--~v~~v~~Dl~d~~~l~~a~--------~~~d   81 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSL--GAIIVKGELDEHEKLVELM--------KKVD   81 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHT--TCEEEECCTTCHHHHHHHH--------TTCS
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcC--CCEEEEecCCCHHHHHHHH--------cCCC
Confidence            46999999999999999999999999999999864211222233333  3667899999999888887        4689


Q ss_pred             EEEecCCCC
Q 033396           94 ILVSSAQLP  102 (120)
Q Consensus        94 ~li~~ag~~  102 (120)
                      +|||+++..
T Consensus        82 ~vi~~a~~~   90 (318)
T 2r6j_A           82 VVISALAFP   90 (318)
T ss_dssp             EEEECCCGG
T ss_pred             EEEECCchh
Confidence            999999864

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.31  E-value=9e-13  Score=90.04  Aligned_cols=84  Identities=13%  Similarity=0.210  Sum_probs=67.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   94 (120)
                      +++||||+|+||++++++|++ |++|++++|+....         .+     +.+|+++++++.++++..      ++|+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~---------~~-----~~~Dl~~~~~~~~~~~~~------~~d~   60 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ---------GG-----YKLDLTDFPRLEDFIIKK------RPDV   60 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT---------TC-----EECCTTSHHHHHHHHHHH------CCSE
T ss_pred             EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC---------CC-----ceeccCCHHHHHHHHHhc------CCCE
Confidence            589999999999999999995 89999999976320         12     789999999998888653      5899


Q ss_pred             EEecCCCCC-------ccceeeeeccceeccc
Q 033396           95 LVSSAQLPY-------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        95 li~~ag~~~-------~~~~~~~n~~g~~~~~  119 (120)
                      ||||||...       +...+++|+.++.+++
T Consensus        61 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~   92 (273)
T 2ggs_A           61 IINAAAMTDVDKCEIEKEKAYKINAEAVRHIV   92 (273)
T ss_dssp             EEECCCCCCHHHHHHCHHHHHHHHTHHHHHHH
T ss_pred             EEECCcccChhhhhhCHHHHHHHhHHHHHHHH
Confidence            999999875       2455778888877654

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.31  E-value=6.3e-14  Score=92.77  Aligned_cols=86  Identities=10%  Similarity=0.005  Sum_probs=66.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      +++++||||+|+||++++++|+++|+  +|++++|++..          ....+.++.+|+++++++.+++         
T Consensus         5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~~~~~~~~~~D~~~~~~~~~~~---------   65 (215)
T 2a35_A            5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPRLDNPVGPLAELLPQLDGS---------   65 (215)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTTEECCBSCHHHHGGGCCSC---------
T ss_pred             CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------cCCCceEEeccccCHHHHHHhh---------
Confidence            57899999999999999999999998  99999998654          1345777888988776543332         


Q ss_pred             cccEEEecCCCCC-----ccceeeeeccceecc
Q 033396           91 KLNILVSSAQLPY-----SQRKFFVKSRGPYGS  118 (120)
Q Consensus        91 ~id~li~~ag~~~-----~~~~~~~n~~g~~~~  118 (120)
                       +|+||||+|...     +...+++|+.++.++
T Consensus        66 -~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l   97 (215)
T 2a35_A           66 -IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAV   97 (215)
T ss_dssp             -CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHH
T ss_pred             -hcEEEECeeeccccCCCHHHHHHhhHHHHHHH
Confidence             899999999864     234556677666554

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.30  E-value=2.9e-11  Score=84.04  Aligned_cols=79  Identities=18%  Similarity=0.200  Sum_probs=63.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh-----HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-----TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ++++||||+|+||++++++|++.|++|++++|+.     ...+ ....+.  ...+.++.+|++|++++.+++       
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~d~~~l~~~~-------   74 (313)
T 1qyd_A            5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQ-MLLYFK--QLGAKLIEASLDDHQRLVDAL-------   74 (313)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHH-HHHHHH--TTTCEEECCCSSCHHHHHHHH-------
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHH-HHHHHH--hCCeEEEeCCCCCHHHHHHHH-------
Confidence            5699999999999999999999999999999974     2222 222232  234678899999999888887       


Q ss_pred             CCcccEEEecCCCCC
Q 033396           89 DGKLNILVSSAQLPY  103 (120)
Q Consensus        89 ~g~id~li~~ag~~~  103 (120)
                       .++|+|||+++...
T Consensus        75 -~~~d~vi~~a~~~~   88 (313)
T 1qyd_A           75 -KQVDVVISALAGGV   88 (313)
T ss_dssp             -TTCSEEEECCCCSS
T ss_pred             -hCCCEEEECCcccc
Confidence             46999999999864

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.29  E-value=2.6e-11  Score=84.05  Aligned_cols=78  Identities=18%  Similarity=0.086  Sum_probs=62.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .++++||||+|+||++++++|+++| ++|++++|++.....  ..+...  .+.++.+|++|++++.+++        ..
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~~--~~~~~~~D~~d~~~l~~~~--------~~   72 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRLQ--GAEVVQGDQDDQVIMELAL--------NG   72 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHHT--TCEEEECCTTCHHHHHHHH--------TT
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHHC--CCEEEEecCCCHHHHHHHH--------hc
Confidence            5789999999999999999999998 999999998654321  222222  3667889999999988887        56


Q ss_pred             ccEEEecCCCC
Q 033396           92 LNILVSSAQLP  102 (120)
Q Consensus        92 id~li~~ag~~  102 (120)
                      +|+|||+++..
T Consensus        73 ~d~vi~~a~~~   83 (299)
T 2wm3_A           73 AYATFIVTNYW   83 (299)
T ss_dssp             CSEEEECCCHH
T ss_pred             CCEEEEeCCCC
Confidence            89999999853

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.29  E-value=5.4e-13  Score=94.18  Aligned_cols=96  Identities=14%  Similarity=0.140  Sum_probs=68.2

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++++++++||||+|+||++++++|++.|++|++++|+..........+. ....+.++.+|+.++.            + 
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~-   89 (343)
T 2b69_A           24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI-GHENFELINHDVVEPL------------Y-   89 (343)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT-TCTTEEEEECCTTSCC------------C-
T ss_pred             ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc-cCCceEEEeCccCChh------------h-
Confidence            4678899999999999999999999999999999986432111111111 1346788899998752            3 


Q ss_pred             CcccEEEecCCCCCc-------cceeeeeccceeccc
Q 033396           90 GKLNILVSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        90 g~id~li~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                      .++|+|||+||....       ...+++|+.|+.+++
T Consensus        90 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~  126 (343)
T 2b69_A           90 IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNML  126 (343)
T ss_dssp             CCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHH
Confidence            679999999998652       344677777766553

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.28  E-value=7.8e-13  Score=91.10  Aligned_cols=78  Identities=14%  Similarity=0.258  Sum_probs=65.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   94 (120)
                      +++||||+|+||++++++|+++|++|+.++|.                     .+|++|++++.+++++.      ++|+
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~D~~d~~~~~~~~~~~------~~d~   59 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK---------------------LLDITNISQVQQVVQEI------RPHI   59 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT---------------------TSCTTCHHHHHHHHHHH------CCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc---------------------ccCCCCHHHHHHHHHhc------CCCE
Confidence            79999999999999999999999999999982                     37999999998888653      6899


Q ss_pred             EEecCCCCC-------ccceeeeeccceeccc
Q 033396           95 LVSSAQLPY-------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        95 li~~ag~~~-------~~~~~~~n~~g~~~~~  119 (120)
                      |||+||...       +...+++|+.++.+++
T Consensus        60 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~   91 (287)
T 3sc6_A           60 IIHCAAYTKVDQAEKERDLAYVINAIGARNVA   91 (287)
T ss_dssp             EEECCCCCCHHHHTTCHHHHHHHHTHHHHHHH
T ss_pred             EEECCcccChHHHhcCHHHHHHHHHHHHHHHH
Confidence            999999875       2455677777766553

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.28  E-value=3.1e-13  Score=94.22  Aligned_cols=90  Identities=18%  Similarity=0.113  Sum_probs=67.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      ++++||||+|+||++++++|+++|..|++..++....+       .....+.++.+|+++ +++.+++        .++|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~-------~~~~~~~~~~~Dl~~-~~~~~~~--------~~~d   65 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEE-------FVNEAARLVKADLAA-DDIKDYL--------KGAE   65 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGG-------GSCTTEEEECCCTTT-SCCHHHH--------TTCS
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChh-------hcCCCcEEEECcCCh-HHHHHHh--------cCCC
Confidence            36999999999999999999999965655555433221       114467889999999 7777777        4799


Q ss_pred             EEEecCCCCC-------ccceeeeeccceeccc
Q 033396           94 ILVSSAQLPY-------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        94 ~li~~ag~~~-------~~~~~~~n~~g~~~~~  119 (120)
                      +|||+|+...       +...+++|+.|+++++
T Consensus        66 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~   98 (313)
T 3ehe_A           66 EVWHIAANPDVRIGAENPDEIYRNNVLATYRLL   98 (313)
T ss_dssp             EEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCChhhhhhCHHHHHHHHHHHHHHHH
Confidence            9999999653       2455778888877654

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.28  E-value=1.4e-11  Score=85.57  Aligned_cols=80  Identities=18%  Similarity=0.167  Sum_probs=62.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChH-----HHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET-----ELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ++++||||+|+||++++++|++.|++|++++|+..     ...+....+.  ...+.++.+|++|++++.++++      
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~------   76 (308)
T 1qyc_A            5 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVK------   76 (308)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHH------
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH--hCCCEEEEeccCCHHHHHHHHc------
Confidence            56999999999999999999999999999999742     1111222332  2346788999999998888773      


Q ss_pred             CCcccEEEecCCCCC
Q 033396           89 DGKLNILVSSAQLPY  103 (120)
Q Consensus        89 ~g~id~li~~ag~~~  103 (120)
                        ++|+|||+++...
T Consensus        77 --~~d~vi~~a~~~~   89 (308)
T 1qyc_A           77 --NVDVVISTVGSLQ   89 (308)
T ss_dssp             --TCSEEEECCCGGG
T ss_pred             --CCCEEEECCcchh
Confidence              5899999998753

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.28  E-value=2.3e-12  Score=89.92  Aligned_cols=80  Identities=9%  Similarity=0.064  Sum_probs=65.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      +++++||||+|+||.+++++|++.|++|++++|+.                    .+|+++++++.+++++.      ++
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~--------------------~~D~~d~~~~~~~~~~~------~~   56 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------ELNLLDSRAVHDFFASE------RI   56 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------TCCTTCHHHHHHHHHHH------CC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc--------------------cCCccCHHHHHHHHHhc------CC
Confidence            56899999999999999999999999999988762                    27999999888888643      68


Q ss_pred             cEEEecCCCCC--------ccceeeeeccceecc
Q 033396           93 NILVSSAQLPY--------SQRKFFVKSRGPYGS  118 (120)
Q Consensus        93 d~li~~ag~~~--------~~~~~~~n~~g~~~~  118 (120)
                      |+|||+|+...        +...+++|+.++.++
T Consensus        57 d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l   90 (321)
T 1e6u_A           57 DQVYLAAAKVGGIVANNTYPADFIYQNMMIESNI   90 (321)
T ss_dssp             SEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHH
T ss_pred             CEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHH
Confidence            99999999875        234466777766554

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.28  E-value=2.1e-13  Score=94.10  Aligned_cols=89  Identities=16%  Similarity=0.156  Sum_probs=67.6

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      .++++||| +|+||++++++|++.|++|+.++|+...+          ...+.++.+|++|++++.++++       +++
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~-------~~~   64 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM----------PAGVQTLIADVTRPDTLASIVH-------LRP   64 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC----------CTTCCEEECCTTCGGGCTTGGG-------GCC
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc----------ccCCceEEccCCChHHHHHhhc-------CCC
Confidence            46799999 59999999999999999999999986542          3457788999999988776663       459


Q ss_pred             cEEEecCCCCC--ccceeeeeccceeccc
Q 033396           93 NILVSSAQLPY--SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        93 d~li~~ag~~~--~~~~~~~n~~g~~~~~  119 (120)
                      |+|||+|+...  +...+++|+.++.+++
T Consensus        65 d~vih~a~~~~~~~~~~~~~n~~~~~~ll   93 (286)
T 3gpi_A           65 EILVYCVAASEYSDEHYRLSYVEGLRNTL   93 (286)
T ss_dssp             SEEEECHHHHHHC-----CCSHHHHHHHH
T ss_pred             CEEEEeCCCCCCCHHHHHHHHHHHHHHHH
Confidence            99999998743  3456677777765543

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.27  E-value=1.8e-11  Score=82.57  Aligned_cols=80  Identities=23%  Similarity=0.293  Sum_probs=61.1

Q ss_pred             cccCcEEEEecC----------------CCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCC
Q 033396           10 SLKGMTALVTGG----------------TKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKI   73 (120)
Q Consensus        10 ~~~~~~~litGa----------------~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   73 (120)
                      ++.||+++||||                +|++|.++|++|+++|++|+++++... ++     . ..+  +  -.+|+++
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-----~-~~g--~--~~~dv~~   73 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-----T-PPF--V--KRVDVMT   73 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-----C-CTT--E--EEEECCS
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-----c-CCC--C--eEEccCc
Confidence            478999999999                589999999999999999999877541 10     0 112  2  2467877


Q ss_pred             HHHHHHHHHHHHhhcCCcccEEEecCCCCCc
Q 033396           74 RAQREKLMETVSSQFDGKLNILVSSAQLPYS  104 (120)
Q Consensus        74 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  104 (120)
                      ..+   +++.+.+.+ +++|++|||||+..+
T Consensus        74 ~~~---~~~~v~~~~-~~~Dili~~Aav~d~  100 (226)
T 1u7z_A           74 ALE---MEAAVNASV-QQQNIFIGCAAVADY  100 (226)
T ss_dssp             HHH---HHHHHHHHG-GGCSEEEECCBCCSE
T ss_pred             HHH---HHHHHHHhc-CCCCEEEECCcccCC
Confidence            544   556667777 899999999999764

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.27  E-value=9.9e-13  Score=100.40  Aligned_cols=96  Identities=15%  Similarity=0.084  Sum_probs=72.8

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHH-HHHHHHHHHhhc
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQ-REKLMETVSSQF   88 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~   88 (120)
                      +++++++||||+|+||++++++|+++ |++|++++|+.......    . ....+.++.+|++++++ +.++++      
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~----~-~~~~v~~v~~Dl~d~~~~~~~~~~------  381 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF----L-NHPHFHFVEGDISIHSEWIEYHVK------  381 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG----T-TCTTEEEEECCTTTCHHHHHHHHH------
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh----c-cCCceEEEECCCCCcHHHHHHhhc------
Confidence            56789999999999999999999998 89999999986543211    1 13468889999998764 555552      


Q ss_pred             CCcccEEEecCCCCCc-------cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                        ++|+|||+||....       ...+++|+.|+.+++
T Consensus       382 --~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll  417 (660)
T 1z7e_A          382 --KCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRII  417 (660)
T ss_dssp             --HCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHH
T ss_pred             --CCCEEEECceecCccccccCHHHHHHhhhHHHHHHH
Confidence              58999999998762       345677887776543

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.25  E-value=1.3e-11  Score=85.19  Aligned_cols=75  Identities=16%  Similarity=0.097  Sum_probs=62.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           15 TALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      +++||||+|+||++++++|++. |++|++++|++......      ....+.++.+|++|++++.+++        .++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~------~~~~v~~~~~D~~d~~~l~~~~--------~~~d   67 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD------WRGKVSVRQLDYFNQESMVEAF--------KGMD   67 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG------GBTTBEEEECCTTCHHHHHHHT--------TTCS
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh------hhCCCEEEEcCCCCHHHHHHHH--------hCCC
Confidence            4899999999999999999998 89999999987653221      1345788899999999888877        5789


Q ss_pred             EEEecCCCCC
Q 033396           94 ILVSSAQLPY  103 (120)
Q Consensus        94 ~li~~ag~~~  103 (120)
                      +|||++|...
T Consensus        68 ~vi~~a~~~~   77 (289)
T 3e48_A           68 TVVFIPSIIH   77 (289)
T ss_dssp             EEEECCCCCC
T ss_pred             EEEEeCCCCc
Confidence            9999999865

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.25  E-value=1.3e-12  Score=97.03  Aligned_cols=99  Identities=13%  Similarity=0.096  Sum_probs=73.0

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH---HHHHHHHHH---------hcCCeEEEEeccCCCHHHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE---LNQRIQEWK---------SKGLQVSGNACDLKIRAQREK   79 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~---~~~~~~~~~---------~~~~~~~~~~~D~~~~~~~~~   79 (120)
                      ..++++||||+|+||.+++++|.+.|++|++++|+...   .+.+.+.+.         ....++.++.+|+++++.+. 
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence            45789999999999999999999999999999997652   223322222         12567999999999977666 


Q ss_pred             HHHHHHhhcCCcccEEEecCCCCCc----cceeeeeccceeccc
Q 033396           80 LMETVSSQFDGKLNILVSSAQLPYS----QRKFFVKSRGPYGSI  119 (120)
Q Consensus        80 ~~~~~~~~~~g~id~li~~ag~~~~----~~~~~~n~~g~~~~~  119 (120)
                             .. .++|+|||||+...+    ...+++|+.|+.+++
T Consensus       228 -------~~-~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll  263 (508)
T 4f6l_B          228 -------LP-ENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVI  263 (508)
T ss_dssp             -------CS-SCCSEEEECCCC--------CCHHHHHHHHHHHH
T ss_pred             -------Cc-cCCCEEEECCceecCCCCHHHHhhhHHHHHHHHH
Confidence                   23 789999999998653    445667777766553

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.23  E-value=5e-11  Score=84.95  Aligned_cols=80  Identities=18%  Similarity=0.096  Sum_probs=63.8

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEecc-CCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD-LKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .+++++||||+|+||++++++|+++|++|++++|+.....  .+.+.. ...+.++.+| ++|++++.+++        .
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~-~~~v~~v~~D~l~d~~~l~~~~--------~   72 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA-IPNVTLFQGPLLNNVPLMDTLF--------E   72 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT-STTEEEEESCCTTCHHHHHHHH--------T
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh-cCCcEEEECCccCCHHHHHHHH--------h
Confidence            4678999999999999999999999999999999865431  122222 2357788999 99999888877        4


Q ss_pred             cccEEEecCCCC
Q 033396           91 KLNILVSSAQLP  102 (120)
Q Consensus        91 ~id~li~~ag~~  102 (120)
                      .+|++|||++..
T Consensus        73 ~~d~Vi~~a~~~   84 (352)
T 1xgk_A           73 GAHLAFINTTSQ   84 (352)
T ss_dssp             TCSEEEECCCST
T ss_pred             cCCEEEEcCCCC
Confidence            689999998764

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.22  E-value=2.1e-12  Score=89.35  Aligned_cols=81  Identities=11%  Similarity=0.103  Sum_probs=65.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   94 (120)
                      +++||||+|+||++++++|+ +|++|+.++|+..                 .+.+|++|++++.++++..      ++|+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------------~~~~D~~d~~~~~~~~~~~------~~d~   57 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------------EFCGDFSNPKGVAETVRKL------RPDV   57 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------------SSCCCTTCHHHHHHHHHHH------CCSE
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------------cccccCCCHHHHHHHHHhc------CCCE
Confidence            58999999999999999999 8999999998751                 3468999999888888642      5899


Q ss_pred             EEecCCCCCc-------cceeeeeccceeccc
Q 033396           95 LVSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        95 li~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                      |||+||....       ...+++|+.++.+++
T Consensus        58 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~   89 (299)
T 1n2s_A           58 IVNAAAHTAVDKAESEPELAQLLNATSVEAIA   89 (299)
T ss_dssp             EEECCCCCCHHHHTTCHHHHHHHHTHHHHHHH
T ss_pred             EEECcccCCHhhhhcCHHHHHHHHHHHHHHHH
Confidence            9999998652       345677777766553

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.21  E-value=2.5e-11  Score=83.34  Aligned_cols=73  Identities=16%  Similarity=0.156  Sum_probs=58.1

Q ss_pred             EEEecCCCchHHHHHHHHHHC--CCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           16 ALVTGGTKGIGYAVVEELAAF--GAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      ++||||+|+||++++++|+++  |++|++++|++.......    .  ..+.++.+|++|++++.+++        .++|
T Consensus         2 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~--~~~~~~~~D~~d~~~~~~~~--------~~~d   67 (286)
T 2zcu_A            2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----A--QGITVRQADYGDEAALTSAL--------QGVE   67 (286)
T ss_dssp             EEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----H--TTCEEEECCTTCHHHHHHHT--------TTCS
T ss_pred             EEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----c--CCCeEEEcCCCCHHHHHHHH--------hCCC
Confidence            799999999999999999998  999999999875543222    1  24668899999998888776        4689


Q ss_pred             EEEecCCCC
Q 033396           94 ILVSSAQLP  102 (120)
Q Consensus        94 ~li~~ag~~  102 (120)
                      +|||++|..
T Consensus        68 ~vi~~a~~~   76 (286)
T 2zcu_A           68 KLLLISSSE   76 (286)
T ss_dssp             EEEECC---
T ss_pred             EEEEeCCCC
Confidence            999999964

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=99.19  E-value=2.6e-11  Score=77.60  Aligned_cols=79  Identities=13%  Similarity=0.020  Sum_probs=65.0

Q ss_pred             CchHHHHHHHHHHCCCEEEEeeCChHHHH---HHHHHHHhcCCeEEEEeccCCCH--HHHHHHHHHHHhhcCCcccEEEe
Q 033396           23 KGIGYAVVEELAAFGAIVHTCSRNETELN---QRIQEWKSKGLQVSGNACDLKIR--AQREKLMETVSSQFDGKLNILVS   97 (120)
Q Consensus        23 ~~ig~~~a~~l~~~g~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~g~id~li~   97 (120)
                      +-++.+.++.|++.|++|++..++..+..   +..+.+...|.++..+++|++++  +++.++++.+.+.+ |+ |+|||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~-G~-dVLVn  103 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHK-GK-DVLVH  103 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTT-TS-CEEEE
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcC-CC-CEEEE
Confidence            34778999999999999999888654321   23445566788999999999999  99999999999988 78 99999


Q ss_pred             cCCCCC
Q 033396           98 SAQLPY  103 (120)
Q Consensus        98 ~ag~~~  103 (120)
                      |+|...
T Consensus       104 nAgg~r  109 (157)
T 3gxh_A          104 CLANYR  109 (157)
T ss_dssp             CSBSHH
T ss_pred             CCCCCC
Confidence            999753

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.18  E-value=3.5e-10  Score=68.03  Aligned_cols=76  Identities=20%  Similarity=0.191  Sum_probs=61.5

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+.++|+|+ |++|..+++.|.+.| ++|++++|++...+...    .  ..+..+.+|+++++++.+++        .+
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~--~~~~~~~~d~~~~~~~~~~~--------~~   69 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R--MGVATKQVDAKDEAGLAKAL--------GG   69 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T--TTCEEEECCTTCHHHHHHHT--------TT
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h--CCCcEEEecCCCHHHHHHHH--------cC
Confidence            467999999 999999999999999 89999999987665443    2  23456789999988777766        57


Q ss_pred             ccEEEecCCCCC
Q 033396           92 LNILVSSAQLPY  103 (120)
Q Consensus        92 id~li~~ag~~~  103 (120)
                      +|++|++++...
T Consensus        70 ~d~vi~~~~~~~   81 (118)
T 3ic5_A           70 FDAVISAAPFFL   81 (118)
T ss_dssp             CSEEEECSCGGG
T ss_pred             CCEEEECCCchh
Confidence            899999997543

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.16  E-value=5.1e-12  Score=87.64  Aligned_cols=94  Identities=15%  Similarity=0.128  Sum_probs=66.9

Q ss_pred             EEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 033396           16 ALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   94 (120)
                      ++||||+|+||++++++|+++| ++|++++|......  ...+.  +..   +.+|+++++.+.++++...  + +++|+
T Consensus         2 vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~--~~~---~~~d~~~~~~~~~~~~~~~--~-~~~d~   71 (310)
T 1eq2_A            2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV--DLN---IADYMDKEDFLIQIMAGEE--F-GDVEA   71 (310)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH--TSC---CSEEEEHHHHHHHHHTTCC--C-SSCCE
T ss_pred             EEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC--cce---eccccccHHHHHHHHhccc--c-CCCcE
Confidence            7999999999999999999999 99999998754321  01111  111   5789998887777663110  1 36999


Q ss_pred             EEecCCCCCc-----cceeeeeccceeccc
Q 033396           95 LVSSAQLPYS-----QRKFFVKSRGPYGSI  119 (120)
Q Consensus        95 li~~ag~~~~-----~~~~~~n~~g~~~~~  119 (120)
                      |||+||....     ...+++|+.++.+++
T Consensus        72 vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~  101 (310)
T 1eq2_A           72 IFHEGACSSTTEWDGKYMMDNNYQYSKELL  101 (310)
T ss_dssp             EEECCSCCCTTCCCHHHHHHHTHHHHHHHH
T ss_pred             EEECcccccCcccCHHHHHHHHHHHHHHHH
Confidence            9999998653     345677777776553

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.11  E-value=4.8e-11  Score=82.54  Aligned_cols=86  Identities=21%  Similarity=0.160  Sum_probs=63.4

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      +.+++++||||+|+||++++++|+++|+      +..           .....+..+.+|++|++++.++++.      .
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~-----------~~~~~~~~~~~D~~d~~~~~~~~~~------~   60 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPG-----------EDWVFVSSKDADLTDTAQTRALFEK------V   60 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTT-----------CEEEECCTTTCCTTSHHHHHHHHHH------S
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcCC------ccc-----------ccccccCceecccCCHHHHHHHHhh------c
Confidence            5678999999999999999999999997      100           0011233346899999998888864      3


Q ss_pred             cccEEEecCCCCC--------ccceeeeeccceeccc
Q 033396           91 KLNILVSSAQLPY--------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        91 ~id~li~~ag~~~--------~~~~~~~n~~g~~~~~  119 (120)
                      ++|+|||+|+...        +...+++|+.|+.+++
T Consensus        61 ~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll   97 (319)
T 4b8w_A           61 QPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVL   97 (319)
T ss_dssp             CCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEECceecccccccccCHHHHHHHHHHHHHHHH
Confidence            6999999999864        1345677777766543

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=99.08  E-value=4.4e-10  Score=76.05  Aligned_cols=83  Identities=18%  Similarity=0.192  Sum_probs=59.9

Q ss_pred             cCcEEEEecC----------------CCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHH
Q 033396           12 KGMTALVTGG----------------TKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRA   75 (120)
Q Consensus        12 ~~~~~litGa----------------~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   75 (120)
                      .||+++||||                +|++|.++|++++++|++|+++++......       .....+..  .|+++  
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~-------~~~~~~~~--~~v~s--   70 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP-------EPHPNLSI--REITN--   70 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC-------CCCTTEEE--EECCS--
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------cCCCCeEE--EEHhH--
Confidence            5899999999                778999999999999999999998642100       00112322  34544  


Q ss_pred             HHHHHHHHHHhhcCCcccEEEecCCCCCccce
Q 033396           76 QREKLMETVSSQFDGKLNILVSSAQLPYSQRK  107 (120)
Q Consensus        76 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~  107 (120)
                       ....++.+.+.+ +++|++|+||++..+.+.
T Consensus        71 -~~em~~~v~~~~-~~~Dili~aAAvsD~~p~  100 (232)
T 2gk4_A           71 -TKDLLIEMQERV-QDYQVLIHSMAVSDYTPV  100 (232)
T ss_dssp             -HHHHHHHHHHHG-GGCSEEEECSBCCSEEEE
T ss_pred             -HHHHHHHHHHhc-CCCCEEEEcCccccccch
Confidence             455666666677 789999999999876543

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=99.06  E-value=2.6e-09  Score=77.62  Aligned_cols=83  Identities=20%  Similarity=0.175  Sum_probs=70.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCC---CEEEEeeCChHHHHHHHHHHHhc-CCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFG---AIVHTCSRNETELNQRIQEWKSK-GLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g---~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      +.++|+|| |++|+++++.|++.|   ..|++++|+...+++..+++... +.++..+.+|+++.+++.+++++.     
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence            36889999 899999999999998   48999999998888888777653 346788899999999999988763     


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                       ++|+||||++...
T Consensus        76 -~~DvVin~ag~~~   88 (405)
T 4ina_A           76 -KPQIVLNIALPYQ   88 (405)
T ss_dssp             -CCSEEEECSCGGG
T ss_pred             -CCCEEEECCCccc
Confidence             5899999998654

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.02  E-value=1.5e-09  Score=74.59  Aligned_cols=70  Identities=16%  Similarity=-0.001  Sum_probs=58.0

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      ++++|||| |+||.+++++|+++|++|+.++|+.........      ..+.++.+|++|.+            + .++|
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~------------~-~~~d   65 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA------SGAEPLLWPGEEPS------------L-DGVT   65 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH------TTEEEEESSSSCCC------------C-TTCC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh------CCCeEEEecccccc------------c-CCCC
Confidence            57999998 999999999999999999999999876543322      34788899999832            3 6799


Q ss_pred             EEEecCCCCC
Q 033396           94 ILVSSAQLPY  103 (120)
Q Consensus        94 ~li~~ag~~~  103 (120)
                      +|||+|+...
T Consensus        66 ~vi~~a~~~~   75 (286)
T 3ius_A           66 HLLISTAPDS   75 (286)
T ss_dssp             EEEECCCCBT
T ss_pred             EEEECCCccc
Confidence            9999999865

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.02  E-value=5.9e-12  Score=87.59  Aligned_cols=89  Identities=15%  Similarity=0.003  Sum_probs=56.9

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh--cCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS--KGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +.+++++||||+|+||++++++|+++|++|++++|+..........+..  ....+.++.+|++                
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------------   68 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------------   68 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------------
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------------
Confidence            4578899999999999999999999999999999976410000000000  0112222333332                


Q ss_pred             CCcccEEEecCCCCCc-------cceeeeeccceecc
Q 033396           89 DGKLNILVSSAQLPYS-------QRKFFVKSRGPYGS  118 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-------~~~~~~n~~g~~~~  118 (120)
                        ++|+|||+|+....       ...++ |+.++.++
T Consensus        69 --~~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~l  102 (321)
T 3vps_A           69 --DVRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHL  102 (321)
T ss_dssp             --TEEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHH
T ss_pred             --cCCEEEECCccCChHHHHhCHHHHHH-HHHHHHHH
Confidence              68999999998652       34445 77666554

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.00  E-value=3.5e-10  Score=80.57  Aligned_cols=72  Identities=13%  Similarity=0.104  Sum_probs=57.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      +++||||+|+||++++++|+++|+ +|+.++++                         +|++++.++++        ++|
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------------~d~~~l~~~~~--------~~d   48 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------------TKEEELESALL--------KAD   48 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------------CCHHHHHHHHH--------HCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------------CCHHHHHHHhc--------cCC
Confidence            599999999999999999999997 77776664                         67777777774        489


Q ss_pred             EEEecCCCCCc---cceeeeeccceeccc
Q 033396           94 ILVSSAQLPYS---QRKFFVKSRGPYGSI  119 (120)
Q Consensus        94 ~li~~ag~~~~---~~~~~~n~~g~~~~~  119 (120)
                      +|||+||....   ...+++|+.++.+++
T Consensus        49 ~Vih~a~~~~~~~~~~~~~~n~~~~~~l~   77 (369)
T 3st7_A           49 FIVHLAGVNRPEHDKEFSLGNVSYLDHVL   77 (369)
T ss_dssp             EEEECCCSBCTTCSTTCSSSCCBHHHHHH
T ss_pred             EEEECCcCCCCCCHHHHHHHHHHHHHHHH
Confidence            99999998653   456777877766543

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.97  E-value=2.5e-09  Score=78.74  Aligned_cols=79  Identities=13%  Similarity=0.119  Sum_probs=62.0

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      +++.++|+| +|++|+++++.|++.|++|++++|+....++..+.    -..+..+.+|+++.+++.+++        ..
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~----~~~~~~~~~Dv~d~~~l~~~l--------~~   68 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG----VQHSTPISLDVNDDAALDAEV--------AK   68 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTT----CTTEEEEECCTTCHHHHHHHH--------TT
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHh----cCCceEEEeecCCHHHHHHHH--------cC
Confidence            467899998 79999999999999999999999987665433322    123667889999988887776        46


Q ss_pred             ccEEEecCCCCC
Q 033396           92 LNILVSSAQLPY  103 (120)
Q Consensus        92 id~li~~ag~~~  103 (120)
                      +|+||||++...
T Consensus        69 ~DvVIn~a~~~~   80 (450)
T 1ff9_A           69 HDLVISLIPYTF   80 (450)
T ss_dssp             SSEEEECCC--C
T ss_pred             CcEEEECCcccc
Confidence            999999999754

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=98.97  E-value=1e-10  Score=87.09  Aligned_cols=83  Identities=20%  Similarity=0.084  Sum_probs=61.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      +++++||||+|+||.+++++|++.|++|+.++|+.....              .+.+|+.+..         .+.+ .++
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~--------------~v~~d~~~~~---------~~~l-~~~  202 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG--------------KRFWDPLNPA---------SDLL-DGA  202 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT--------------CEECCTTSCC---------TTTT-TTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc--------------ceeecccchh---------HHhc-CCC
Confidence            678999999999999999999999999999999865421              1456776431         2334 679


Q ss_pred             cEEEecCCCCCc--------cceeeeeccceeccc
Q 033396           93 NILVSSAQLPYS--------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        93 d~li~~ag~~~~--------~~~~~~n~~g~~~~~  119 (120)
                      |+|||+||....        ...+++|+.|+.+++
T Consensus       203 D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll  237 (516)
T 3oh8_A          203 DVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLA  237 (516)
T ss_dssp             SEEEECCCC-----CCGGGHHHHHHHTHHHHHHHH
T ss_pred             CEEEECCCCccccccchhHHHHHHHHHHHHHHHHH
Confidence            999999998631        234667777766553

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.94  E-value=5.7e-10  Score=77.59  Aligned_cols=81  Identities=16%  Similarity=0.175  Sum_probs=59.8

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++++|+++|||++ |+|+++++.|++.| +|++++|+.+..+++.+++...+.....+.+|+++.          .+.+ 
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~~-  191 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVDL-  191 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCCC-
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHhh-
Confidence            4689999999997 99999999999999 999999998877777666643210000112344441          3445 


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                      +++|+||||+|...
T Consensus       192 ~~~DilVn~ag~~~  205 (287)
T 1nvt_A          192 DGVDIIINATPIGM  205 (287)
T ss_dssp             TTCCEEEECSCTTC
T ss_pred             CCCCEEEECCCCCC
Confidence            78999999998754

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.93  E-value=6.1e-09  Score=68.26  Aligned_cols=80  Identities=18%  Similarity=0.251  Sum_probs=57.1

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+++++|+||++++|.++++.+...|++|+.++++++..+..    ...+...   ..|.++.+..+.+.+.. .  +++
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~----~~~g~~~---~~d~~~~~~~~~~~~~~-~--~~~  107 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SRLGVEY---VGDSRSVDFADEILELT-D--GYG  107 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HTTCCSE---EEETTCSTHHHHHHHHT-T--TCC
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCCE---EeeCCcHHHHHHHHHHh-C--CCC
Confidence            678999999999999999999999999999999987655432    2234332   24676655433333322 1  146


Q ss_pred             ccEEEecCCC
Q 033396           92 LNILVSSAQL  101 (120)
Q Consensus        92 id~li~~ag~  101 (120)
                      +|++|+|+|.
T Consensus       108 ~D~vi~~~g~  117 (198)
T 1pqw_A          108 VDVVLNSLAG  117 (198)
T ss_dssp             EEEEEECCCT
T ss_pred             CeEEEECCch
Confidence            9999999984

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.91  E-value=8.4e-09  Score=72.69  Aligned_cols=80  Identities=16%  Similarity=0.193  Sum_probs=59.9

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+++++|||+++++|..+++.+...|++|++++++++.++.. +++   +...   .+|.++.+++.+.+.+...   ++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~---g~~~---~~d~~~~~~~~~~~~~~~~---~~  214 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI---GFDA---AFNYKTVNSLEEALKKASP---DG  214 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCSE---EEETTSCSCHHHHHHHHCT---TC
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc---CCcE---EEecCCHHHHHHHHHHHhC---CC
Confidence            578999999999999999999999999999999987766544 333   4332   2477663444445544432   57


Q ss_pred             ccEEEecCCC
Q 033396           92 LNILVSSAQL  101 (120)
Q Consensus        92 id~li~~ag~  101 (120)
                      +|++|+|+|.
T Consensus       215 ~d~vi~~~g~  224 (333)
T 1v3u_A          215 YDCYFDNVGG  224 (333)
T ss_dssp             EEEEEESSCH
T ss_pred             CeEEEECCCh
Confidence            9999999985

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.85  E-value=4.2e-08  Score=69.20  Aligned_cols=83  Identities=16%  Similarity=0.209  Sum_probs=63.9

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCC---hHHHHHHHHHHHhc-CCeEEEEeccCCCHHHHHHHHHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRN---ETELNQRIQEWKSK-GLQVSGNACDLKIRAQREKLMET   83 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~   83 (120)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+   .++.+++.+++... +..+.  ..++.+.+++.+.+  
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~--~~~~~~~~~l~~~l--  224 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQ--LFDIEDHEQLRKEI--  224 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEE--EEETTCHHHHHHHH--
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceE--EeccchHHHHHhhh--
Confidence            4578999999998 7999999999999998 89999999   77788777777654 33333  34566655555444  


Q ss_pred             HHhhcCCcccEEEecCCCC
Q 033396           84 VSSQFDGKLNILVSSAQLP  102 (120)
Q Consensus        84 ~~~~~~g~id~li~~ag~~  102 (120)
                            ...|+|||+..+.
T Consensus       225 ------~~aDiIINaTp~G  237 (315)
T 3tnl_A          225 ------AESVIFTNATGVG  237 (315)
T ss_dssp             ------HTCSEEEECSSTT
T ss_pred             ------cCCCEEEECccCC
Confidence                  4689999998653

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.76  E-value=2.6e-08  Score=73.60  Aligned_cols=81  Identities=15%  Similarity=0.173  Sum_probs=62.2

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      ..++++.++|+|+ |++|+++++.|++. +.+|++++|+.+..+++.+.   .  .+..+.+|+++.+++.+++      
T Consensus        19 ~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~---~--~~~~~~~D~~d~~~l~~~l------   86 (467)
T 2axq_A           19 GRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP---S--GSKAISLDVTDDSALDKVL------   86 (467)
T ss_dssp             ----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG---G--TCEEEECCTTCHHHHHHHH------
T ss_pred             cCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh---c--CCcEEEEecCCHHHHHHHH------
Confidence            3467889999998 99999999999998 68899999998776555432   1  2455678999988877766      


Q ss_pred             cCCcccEEEecCCCCC
Q 033396           88 FDGKLNILVSSAQLPY  103 (120)
Q Consensus        88 ~~g~id~li~~ag~~~  103 (120)
                        .++|+|||+++...
T Consensus        87 --~~~DvVIn~tp~~~  100 (467)
T 2axq_A           87 --ADNDVVISLIPYTF  100 (467)
T ss_dssp             --HTSSEEEECSCGGG
T ss_pred             --cCCCEEEECCchhh
Confidence              35899999999753

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.73  E-value=9.5e-08  Score=67.72  Aligned_cols=80  Identities=16%  Similarity=0.145  Sum_probs=59.4

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+++++|+|+++++|..+++.+...|++|+.+++++...+.. .+   .+...   ..|.++.+++.+.+.++..   ++
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~---~g~~~---~~d~~~~~~~~~~~~~~~~---~~  238 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RS---IGGEV---FIDFTKEKDIVGAVLKATD---GG  238 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HH---TTCCE---EEETTTCSCHHHHHHHHHT---SC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HH---cCCce---EEecCccHhHHHHHHHHhC---CC
Confidence            578999999999999999999999999999999887665332 22   34332   2377654555555555433   36


Q ss_pred             ccEEEecCCC
Q 033396           92 LNILVSSAQL  101 (120)
Q Consensus        92 id~li~~ag~  101 (120)
                      +|++|+|+|.
T Consensus       239 ~D~vi~~~g~  248 (347)
T 2hcy_A          239 AHGVINVSVS  248 (347)
T ss_dssp             EEEEEECSSC
T ss_pred             CCEEEECCCc
Confidence            9999999996

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.72  E-value=1.3e-07  Score=66.71  Aligned_cols=81  Identities=16%  Similarity=0.173  Sum_probs=58.3

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+++++|+|+++++|.++++.+...|++|+.+++++..++... ++   +...   ..|.++.+..+++.+.. ..  .+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~---g~~~---~~d~~~~~~~~~i~~~~-~~--~~  214 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KL---GCHH---TINYSTQDFAEVVREIT-GG--KG  214 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---TCSE---EEETTTSCHHHHHHHHH-TT--CC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCCE---EEECCCHHHHHHHHHHh-CC--CC
Confidence            5789999999999999999999999999999999876655432 22   4332   23666554444333322 11  46


Q ss_pred             ccEEEecCCCC
Q 033396           92 LNILVSSAQLP  102 (120)
Q Consensus        92 id~li~~ag~~  102 (120)
                      +|++|+|+|..
T Consensus       215 ~d~vi~~~g~~  225 (333)
T 1wly_A          215 VDVVYDSIGKD  225 (333)
T ss_dssp             EEEEEECSCTT
T ss_pred             CeEEEECCcHH
Confidence            99999999973

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.70  E-value=9.8e-08  Score=67.06  Aligned_cols=79  Identities=15%  Similarity=0.170  Sum_probs=57.1

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+++++|+||++++|..+++.+...|++|+.+++++..++...+ +   +...   ..|.++.+..+++.+.. ..  .+
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~---g~~~---~~~~~~~~~~~~~~~~~-~~--~~  209 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A---GAWQ---VINYREEDLVERLKEIT-GG--KK  209 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H---TCSE---EEETTTSCHHHHHHHHT-TT--CC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCCE---EEECCCccHHHHHHHHh-CC--CC
Confidence            57899999999999999999999999999999998766544332 2   4332   23666654444333322 11  36


Q ss_pred             ccEEEecCC
Q 033396           92 LNILVSSAQ  100 (120)
Q Consensus        92 id~li~~ag  100 (120)
                      +|++|+|+|
T Consensus       210 ~D~vi~~~g  218 (327)
T 1qor_A          210 VRVVYDSVG  218 (327)
T ss_dssp             EEEEEECSC
T ss_pred             ceEEEECCc
Confidence            999999999

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.70  E-value=1.2e-07  Score=67.97  Aligned_cols=79  Identities=16%  Similarity=0.201  Sum_probs=60.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+.+++++|+|+ |++|+.+++.+...|++|+++++++..++...+.+   +..   +.+|.++.+++.+++        
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~---g~~---~~~~~~~~~~l~~~~--------  227 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF---GGR---VITLTATEANIKKSV--------  227 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTS---EEEEECCHHHHHHHH--------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---Cce---EEEecCCHHHHHHHH--------
Confidence            478899999999 99999999999999999999999987765544322   333   345777777766665        


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                      ...|++|++++...
T Consensus       228 ~~~DvVi~~~g~~~  241 (369)
T 2eez_A          228 QHADLLIGAVLVPG  241 (369)
T ss_dssp             HHCSEEEECCC---
T ss_pred             hCCCEEEECCCCCc
Confidence            35899999999764

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.69  E-value=1.3e-07  Score=58.69  Aligned_cols=74  Identities=16%  Similarity=0.246  Sum_probs=58.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      .+.++|+|+ |.+|..+++.|.+.|++|++++++++..+...+    .+  +.++.+|.++++.+.++      .. ...
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~~--~~~~~gd~~~~~~l~~~------~~-~~~   71 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----EG--FDAVIADPTDESFYRSL------DL-EGV   71 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT--CEEEECCTTCHHHHHHS------CC-TTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----CC--CcEEECCCCCHHHHHhC------Cc-ccC
Confidence            456899998 779999999999999999999999876554432    23  45678999998876543      22 578


Q ss_pred             cEEEecCC
Q 033396           93 NILVSSAQ  100 (120)
Q Consensus        93 d~li~~ag  100 (120)
                      |.+|.+.+
T Consensus        72 d~vi~~~~   79 (141)
T 3llv_A           72 SAVLITGS   79 (141)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEecC
Confidence            99999887

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.68  E-value=6.6e-08  Score=68.36  Aligned_cols=81  Identities=12%  Similarity=0.163  Sum_probs=58.8

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+++++|+|++|++|..+++.+...|++|+.+++++.+++.+.++   .+....   .|.++.+++.+.+.+..   +++
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~---~d~~~~~~~~~~~~~~~---~~~  225 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTK---FGFDDA---FNYKEESDLTAALKRCF---PNG  225 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---SCCSEE---EETTSCSCSHHHHHHHC---TTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cCCceE---EecCCHHHHHHHHHHHh---CCC
Confidence            578999999999999999999999999999999987766544322   344322   36655434444444432   257


Q ss_pred             ccEEEecCCC
Q 033396           92 LNILVSSAQL  101 (120)
Q Consensus        92 id~li~~ag~  101 (120)
                      +|++|+|+|.
T Consensus       226 ~d~vi~~~g~  235 (345)
T 2j3h_A          226 IDIYFENVGG  235 (345)
T ss_dssp             EEEEEESSCH
T ss_pred             CcEEEECCCH
Confidence            9999999986

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.68  E-value=1.3e-07  Score=67.28  Aligned_cols=82  Identities=18%  Similarity=0.289  Sum_probs=58.6

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+++++|+||++++|..+++.+...|++|+.+++++.+++.. .++   +...   .+|.++.+..+.+.+.. .  +++
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~~~~~~~~-~--~~~  231 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL---GAAA---GFNYKKEDFSEATLKFT-K--GAG  231 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TCSE---EEETTTSCHHHHHHHHT-T--TSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCcE---EEecCChHHHHHHHHHh-c--CCC
Confidence            578999999999999999999999999999999988766544 333   4332   24665544333333221 1  136


Q ss_pred             ccEEEecCCCCC
Q 033396           92 LNILVSSAQLPY  103 (120)
Q Consensus        92 id~li~~ag~~~  103 (120)
                      +|++|+|+|...
T Consensus       232 ~d~vi~~~G~~~  243 (354)
T 2j8z_A          232 VNLILDCIGGSY  243 (354)
T ss_dssp             EEEEEESSCGGG
T ss_pred             ceEEEECCCchH
Confidence            999999999753

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.67  E-value=7.1e-08  Score=66.50  Aligned_cols=77  Identities=13%  Similarity=0.266  Sum_probs=57.8

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+++|+++|+|+ ||+|+++++.|++.|++|++++|+.++.+++.+++...+ .+.  ..|.   +++       .+   
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~-~~~--~~~~---~~~-------~~---  178 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQ--ALSM---DEL-------EG---  178 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEE--ECCS---GGG-------TT---
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC-Cee--EecH---HHh-------cc---
Confidence            467899999998 799999999999999999999999888777776664432 221  1232   111       11   


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                      +++|+||||++...
T Consensus       179 ~~~DivVn~t~~~~  192 (271)
T 1nyt_A          179 HEFDLIINATSSGI  192 (271)
T ss_dssp             CCCSEEEECCSCGG
T ss_pred             CCCCEEEECCCCCC
Confidence            47999999999754

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=98.66  E-value=7.1e-09  Score=73.19  Aligned_cols=94  Identities=15%  Similarity=0.157  Sum_probs=61.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCC-------EEEEeeCCh--HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHH
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGA-------IVHTCSRNE--TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETV   84 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~-------~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (120)
                      ..++||||+|+||.+++..|+++|.       +|+++++.+  .........+.......  + .|+++...+.+.+   
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~--~-~di~~~~~~~~a~---   78 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPL--L-AGLEATDDPKVAF---   78 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT--E-EEEEEESCHHHHT---
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccc--c-CCeEeccChHHHh---
Confidence            4699999999999999999999885       899999864  22222223333211121  1 4665544444444   


Q ss_pred             HhhcCCcccEEEecCCCCCc-----cceeeeeccceecc
Q 033396           85 SSQFDGKLNILVSSAQLPYS-----QRKFFVKSRGPYGS  118 (120)
Q Consensus        85 ~~~~~g~id~li~~ag~~~~-----~~~~~~n~~g~~~~  118 (120)
                           ...|++||.||....     ...++.|+.++.++
T Consensus        79 -----~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l  112 (327)
T 1y7t_A           79 -----KDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQ  112 (327)
T ss_dssp             -----TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHH
T ss_pred             -----CCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHH
Confidence                 468999999998762     23456666665443

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.66  E-value=3.1e-08  Score=61.26  Aligned_cols=78  Identities=18%  Similarity=0.194  Sum_probs=56.9

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      ++++.++|+|+ |.+|..+++.|.+.|++|+++++++...+.    +...+.  ..+.+|.++++.+.++      .. +
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~----~~~~~~--~~~~~d~~~~~~l~~~------~~-~   69 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNA----YASYAT--HAVIANATEENELLSL------GI-R   69 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHT----TTTTCS--EEEECCTTCHHHHHTT------TG-G
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHHhCC--EEEEeCCCCHHHHHhc------CC-C
Confidence            44667999998 999999999999999999999998755432    222232  4567898886654432      12 5


Q ss_pred             cccEEEecCCCC
Q 033396           91 KLNILVSSAQLP  102 (120)
Q Consensus        91 ~id~li~~ag~~  102 (120)
                      +.|++|++++..
T Consensus        70 ~~d~vi~~~~~~   81 (144)
T 2hmt_A           70 NFEYVIVAIGAN   81 (144)
T ss_dssp             GCSEEEECCCSC
T ss_pred             CCCEEEECCCCc
Confidence            789999999864

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.64  E-value=2.4e-07  Score=65.89  Aligned_cols=81  Identities=17%  Similarity=0.253  Sum_probs=57.3

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+++++|+|++|++|..+++.+...|++|+.+++++..++.. .   +.+...   .+|.++.+..+++.+.. .  +.+
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~---~~ga~~---~~d~~~~~~~~~~~~~~-~--~~~  239 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-L---QNGAHE---VFNHREVNYIDKIKKYV-G--EKG  239 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-H---HTTCSE---EEETTSTTHHHHHHHHH-C--TTC
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-H---HcCCCE---EEeCCCchHHHHHHHHc-C--CCC
Confidence            578999999999999999999999999999999987766522 2   234332   24666544333333222 1  137


Q ss_pred             ccEEEecCCCC
Q 033396           92 LNILVSSAQLP  102 (120)
Q Consensus        92 id~li~~ag~~  102 (120)
                      +|++|+|+|..
T Consensus       240 ~D~vi~~~G~~  250 (351)
T 1yb5_A          240 IDIIIEMLANV  250 (351)
T ss_dssp             EEEEEESCHHH
T ss_pred             cEEEEECCChH
Confidence            99999999853

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.63  E-value=1.7e-07  Score=66.04  Aligned_cols=80  Identities=14%  Similarity=0.152  Sum_probs=57.7

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+++++|+|++|++|..++..+...|++|+.+++++.+.+.+.++   .+....   .|.++.+..+.+. +.   .+++
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~---~g~~~~---~~~~~~~~~~~~~-~~---~~~~  218 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEE---LGFDGA---IDYKNEDLAAGLK-RE---CPKG  218 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---TCCSEE---EETTTSCHHHHHH-HH---CTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cCCCEE---EECCCHHHHHHHH-Hh---cCCC
Confidence            688999999999999999999999999999999988776544333   344322   3555544323222 22   2357


Q ss_pred             ccEEEecCCC
Q 033396           92 LNILVSSAQL  101 (120)
Q Consensus        92 id~li~~ag~  101 (120)
                      +|++|+|+|.
T Consensus       219 ~d~vi~~~g~  228 (336)
T 4b7c_A          219 IDVFFDNVGG  228 (336)
T ss_dssp             EEEEEESSCH
T ss_pred             ceEEEECCCc
Confidence            9999999995

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.61  E-value=5.4e-08  Score=72.81  Aligned_cols=74  Identities=19%  Similarity=0.179  Sum_probs=50.2

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc-
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF-   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   88 (120)
                      .+++|+++|||| ||+|+++++.|++.|++|++++|+.+.++++.+++   +..+.    ++.+   +        +.+ 
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~---~~~~~----~~~d---l--------~~~~  421 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAI---GGKAL----SLTD---L--------DNYH  421 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT---TC-CE----ETTT---T--------TTC-
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCcee----eHHH---h--------hhcc
Confidence            467889999999 59999999999999999999999988877776655   22222    1222   1        111 


Q ss_pred             CCcccEEEecCCCC
Q 033396           89 DGKLNILVSSAQLP  102 (120)
Q Consensus        89 ~g~id~li~~ag~~  102 (120)
                      .+.+|+||||+|+.
T Consensus       422 ~~~~DilVN~agvg  435 (523)
T 2o7s_A          422 PEDGMVLANTTSMG  435 (523)
T ss_dssp             -CCSEEEEECSSTT
T ss_pred             ccCceEEEECCCCC
Confidence            14589999999873

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.60  E-value=1.7e-07  Score=66.67  Aligned_cols=80  Identities=14%  Similarity=0.114  Sum_probs=56.5

Q ss_pred             cC--cEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           12 KG--MTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        12 ~~--~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .+  ++++|+|++|++|..+++.+...|+ +|++++++++..+...++   .+...   .+|.++.+ +.+.+.+.   .
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~g~~~---~~d~~~~~-~~~~~~~~---~  227 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---LGFDA---AINYKKDN-VAEQLRES---C  227 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---SCCSE---EEETTTSC-HHHHHHHH---C
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---cCCce---EEecCchH-HHHHHHHh---c
Confidence            46  8999999999999999999999999 999999987665544332   24332   24666543 22222222   2


Q ss_pred             CCcccEEEecCCC
Q 033396           89 DGKLNILVSSAQL  101 (120)
Q Consensus        89 ~g~id~li~~ag~  101 (120)
                      ++++|++|+|+|.
T Consensus       228 ~~~~d~vi~~~G~  240 (357)
T 2zb4_A          228 PAGVDVYFDNVGG  240 (357)
T ss_dssp             TTCEEEEEESCCH
T ss_pred             CCCCCEEEECCCH
Confidence            2469999999994

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.57  E-value=2.7e-07  Score=64.17  Aligned_cols=80  Identities=14%  Similarity=0.144  Sum_probs=59.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .+++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++......+.....+..+   +.+.+       
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~---l~~~l-------  192 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARG---IEDVI-------  192 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTT---HHHHH-------
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHH---HHHHH-------
Confidence            578999999998 7999999999999998 79999999988888887776542222222233322   33333       


Q ss_pred             CCcccEEEecCCC
Q 033396           89 DGKLNILVSSAQL  101 (120)
Q Consensus        89 ~g~id~li~~ag~  101 (120)
                       ...|+|||+..+
T Consensus       193 -~~~DiVInaTp~  204 (283)
T 3jyo_A          193 -AAADGVVNATPM  204 (283)
T ss_dssp             -HHSSEEEECSST
T ss_pred             -hcCCEEEECCCC
Confidence             357999999865

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.54  E-value=1.1e-06  Score=61.83  Aligned_cols=83  Identities=16%  Similarity=0.192  Sum_probs=61.3

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCC---hHHHHHHHHHHHhc-CCeEEEEeccCCCHHHHHHHHHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRN---ETELNQRIQEWKSK-GLQVSGNACDLKIRAQREKLMET   83 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~   83 (120)
                      .++++|.++|+|+ ||.|++++..|++.|+ +|+++.|+   .++.+++.+++... +..+..  .+..+.+.+...+  
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~--~~~~~l~~~~~~l--  218 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTV--TDLADQHAFTEAL--  218 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEE--EETTCHHHHHHHH--
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEE--echHhhhhhHhhc--
Confidence            4578999999998 8999999999999997 79999999   77777777777654 333433  3444543223333  


Q ss_pred             HHhhcCCcccEEEecCCCC
Q 033396           84 VSSQFDGKLNILVSSAQLP  102 (120)
Q Consensus        84 ~~~~~~g~id~li~~ag~~  102 (120)
                            ...|+|||+..+.
T Consensus       219 ------~~~DiIINaTp~G  231 (312)
T 3t4e_A          219 ------ASADILTNGTKVG  231 (312)
T ss_dssp             ------HHCSEEEECSSTT
T ss_pred             ------cCceEEEECCcCC
Confidence                  3579999998664

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=98.52  E-value=1.3e-07  Score=65.28  Aligned_cols=33  Identities=42%  Similarity=0.429  Sum_probs=31.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      .++||||+|.||++++++|.++|++|+.+.|++
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~   34 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKP   34 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence            489999999999999999999999999999875

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.50  E-value=7.5e-07  Score=65.13  Aligned_cols=87  Identities=16%  Similarity=0.194  Sum_probs=60.8

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCC-----------CHHHHHH
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLK-----------IRAQREK   79 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----------~~~~~~~   79 (120)
                      -.+++++|+|++|++|...+..+...|++|+++++++.+++.+ +   +.|....+...+..           +.+++..
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~---~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~  294 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-R---ALGCDLVINRAELGITDDIADDPRRVVETGRK  294 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-H---HTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-H---hcCCCEEEecccccccccccccccccchhhhH
Confidence            3678999999999999999999999999999999887665433 2   33544333222211           1234455


Q ss_pred             HHHHHHhhcCCcccEEEecCCC
Q 033396           80 LMETVSSQFDGKLNILVSSAQL  101 (120)
Q Consensus        80 ~~~~~~~~~~g~id~li~~ag~  101 (120)
                      +.+++.+..++++|++|+++|.
T Consensus       295 ~~~~v~~~~g~g~Dvvid~~G~  316 (447)
T 4a0s_A          295 LAKLVVEKAGREPDIVFEHTGR  316 (447)
T ss_dssp             HHHHHHHHHSSCCSEEEECSCH
T ss_pred             HHHHHHHHhCCCceEEEECCCc
Confidence            5666666554579999999986

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.46  E-value=2.8e-06  Score=53.39  Aligned_cols=77  Identities=14%  Similarity=0.078  Sum_probs=55.7

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHH-HHHHHhhcCC
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWKSKGLQVSGNACDLKIRAQREKL-METVSSQFDG   90 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~~~~~~g   90 (120)
                      .+.++|.|+ |.+|..+++.|.+.|++|+++++++ +..+......   ...+.++.+|.++++.+.++ +        .
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~---~~~~~~i~gd~~~~~~l~~a~i--------~   70 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL---GDNADVIPGDSNDSSVLKKAGI--------D   70 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH---CTTCEEEESCTTSHHHHHHHTT--------T
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh---cCCCeEEEcCCCCHHHHHHcCh--------h
Confidence            456788886 9999999999999999999999974 4333333221   22356778999998866554 3        4


Q ss_pred             cccEEEecCCC
Q 033396           91 KLNILVSSAQL  101 (120)
Q Consensus        91 ~id~li~~ag~  101 (120)
                      ..|.+|.+.+-
T Consensus        71 ~ad~vi~~~~~   81 (153)
T 1id1_A           71 RCRAILALSDN   81 (153)
T ss_dssp             TCSEEEECSSC
T ss_pred             hCCEEEEecCC
Confidence            67888877754

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.45  E-value=1.1e-06  Score=62.27  Aligned_cols=81  Identities=15%  Similarity=0.226  Sum_probs=56.7

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .+++++|+|+++++|..++..+... |++|+.+++++..++.. +++   +....   .|.++.+..+. +.+....  +
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~---g~~~~---~~~~~~~~~~~-~~~~~~~--~  239 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRA---GADYV---INASMQDPLAE-IRRITES--K  239 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHH---TCSEE---EETTTSCHHHH-HHHHTTT--S
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCCEE---ecCCCccHHHH-HHHHhcC--C
Confidence            6789999999999999999999998 99999999987766543 233   43322   35555433222 2222111  4


Q ss_pred             cccEEEecCCCC
Q 033396           91 KLNILVSSAQLP  102 (120)
Q Consensus        91 ~id~li~~ag~~  102 (120)
                      ++|++|+|+|..
T Consensus       240 ~~d~vi~~~g~~  251 (347)
T 1jvb_A          240 GVDAVIDLNNSE  251 (347)
T ss_dssp             CEEEEEESCCCH
T ss_pred             CceEEEECCCCH
Confidence            799999999965

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.44  E-value=2.1e-06  Score=60.69  Aligned_cols=79  Identities=18%  Similarity=0.231  Sum_probs=56.4

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+++++|+|+++++|..++..+...|++|+.+++++.+++... ++   +....   .|.++++ +.+.+.+...  +.+
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~---ga~~~---~d~~~~~-~~~~~~~~~~--~~~  235 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL---GADET---VNYTHPD-WPKEVRRLTG--GKG  235 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---TCSEE---EETTSTT-HHHHHHHHTT--TTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc---CCCEE---EcCCccc-HHHHHHHHhC--CCC
Confidence            5789999999999999999999999999999999877665442 22   43322   4666543 2222332221  147


Q ss_pred             ccEEEecCC
Q 033396           92 LNILVSSAQ  100 (120)
Q Consensus        92 id~li~~ag  100 (120)
                      +|++|+++|
T Consensus       236 ~d~vi~~~g  244 (343)
T 2eih_A          236 ADKVVDHTG  244 (343)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEECCC
Confidence            999999999

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.43  E-value=2.9e-06  Score=51.98  Aligned_cols=76  Identities=13%  Similarity=0.133  Sum_probs=53.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      ++.++|+|+ |.+|..+++.|.+.|++|+++++++...+...+.   .+  +..+..|.++++.+.+.      .. .+.
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---~~--~~~~~~d~~~~~~l~~~------~~-~~~   70 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---ID--ALVINGDCTKIKTLEDA------GI-EDA   70 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---CS--SEEEESCTTSHHHHHHT------TT-TTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---cC--cEEEEcCCCCHHHHHHc------Cc-ccC
Confidence            356889987 9999999999999999999999987665443322   12  34566788776654321      12 467


Q ss_pred             cEEEecCCC
Q 033396           93 NILVSSAQL  101 (120)
Q Consensus        93 d~li~~ag~  101 (120)
                      |++|.+++.
T Consensus        71 d~vi~~~~~   79 (140)
T 1lss_A           71 DMYIAVTGK   79 (140)
T ss_dssp             SEEEECCSC
T ss_pred             CEEEEeeCC
Confidence            888888764

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=98.42  E-value=1.1e-06  Score=61.41  Aligned_cols=78  Identities=15%  Similarity=0.238  Sum_probs=56.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ++++++++|+|+ |++|++++..|++.|+ +|++++|+.++.+++.+++......       +.+.+++       .+..
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~-------~~~~~~~-------~~~~  202 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSA-------YFSLAEA-------ETRL  202 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCC-------EECHHHH-------HHTG
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCc-------eeeHHHH-------Hhhh
Confidence            467899999998 7899999999999997 8999999988877776655321111       1122222       2233


Q ss_pred             CCcccEEEecCCCCC
Q 033396           89 DGKLNILVSSAQLPY  103 (120)
Q Consensus        89 ~g~id~li~~ag~~~  103 (120)
                       ...|+|||+++...
T Consensus       203 -~~aDivIn~t~~~~  216 (297)
T 2egg_A          203 -AEYDIIINTTSVGM  216 (297)
T ss_dssp             -GGCSEEEECSCTTC
T ss_pred             -ccCCEEEECCCCCC
Confidence             57899999998754

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.41  E-value=2.8e-06  Score=60.37  Aligned_cols=81  Identities=20%  Similarity=0.313  Sum_probs=58.1

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+++++|+||+|++|...+..+...|++|+.+++++.+++.+. +   .+....   .|.++.+..+.+. +..   +++
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~---lGa~~~---~~~~~~~~~~~~~-~~~---~~g  235 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-R---LGAKRG---INYRSEDFAAVIK-AET---GQG  235 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-H---HTCSEE---EETTTSCHHHHHH-HHH---SSC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-h---cCCCEE---EeCCchHHHHHHH-HHh---CCC
Confidence            6789999999999999999999999999999999887765433 2   244332   3455444333332 222   268


Q ss_pred             ccEEEecCCCCC
Q 033396           92 LNILVSSAQLPY  103 (120)
Q Consensus        92 id~li~~ag~~~  103 (120)
                      +|++|+|+|...
T Consensus       236 ~Dvvid~~g~~~  247 (353)
T 4dup_A          236 VDIILDMIGAAY  247 (353)
T ss_dssp             EEEEEESCCGGG
T ss_pred             ceEEEECCCHHH
Confidence            999999999643

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.38  E-value=1.7e-06  Score=60.89  Aligned_cols=81  Identities=14%  Similarity=0.161  Sum_probs=56.3

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      -.+++++|+||+|++|...+..+...|++|+.+++++.+++.. .   +.+....   .|.++.+..+.+. +...  +.
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~---~~ga~~~---~~~~~~~~~~~~~-~~~~--~~  216 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-K---EYGAEYL---INASKEDILRQVL-KFTN--GK  216 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-H---HTTCSEE---EETTTSCHHHHHH-HHTT--TS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-H---HcCCcEE---EeCCCchHHHHHH-HHhC--CC
Confidence            3678999999999999999999999999999999987766532 2   2354332   3444433222222 2211  14


Q ss_pred             cccEEEecCCC
Q 033396           91 KLNILVSSAQL  101 (120)
Q Consensus        91 ~id~li~~ag~  101 (120)
                      ++|++|+|+|.
T Consensus       217 g~D~vid~~g~  227 (334)
T 3qwb_A          217 GVDASFDSVGK  227 (334)
T ss_dssp             CEEEEEECCGG
T ss_pred             CceEEEECCCh
Confidence            69999999996

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.37  E-value=4.7e-06  Score=57.41  Aligned_cols=77  Identities=9%  Similarity=0.152  Sum_probs=56.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++...+ .+..  .|+   +++.       +   
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~-~~~~--~~~---~~~~-------~---  178 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQA--VSM---DSIP-------L---  178 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEE--EEG---GGCC-------C---
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC-CeEE--eeH---HHhc-------c---
Confidence            467899999998 799999999999999999999999988887777765432 2222  222   1110       1   


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                      +..|+|||+++...
T Consensus       179 ~~~DivIn~t~~~~  192 (272)
T 1p77_A          179 QTYDLVINATSAGL  192 (272)
T ss_dssp             SCCSEEEECCCC--
T ss_pred             CCCCEEEECCCCCC
Confidence            36899999998765

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=98.36  E-value=5.5e-06  Score=60.77  Aligned_cols=87  Identities=11%  Similarity=0.093  Sum_probs=62.1

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEecc----------CCCHHHHHHH
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD----------LKIRAQREKL   80 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D----------~~~~~~~~~~   80 (120)
                      -.+.+++|+|++|++|...+..+...|++|+++++++.+++.+ +++   |....+...+          .+++.+++++
T Consensus       227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~l---Ga~~vi~~~~~d~~~~~~~~~~~~~~~~~~  302 (456)
T 3krt_A          227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAM---GAEAIIDRNAEGYRFWKDENTQDPKEWKRF  302 (456)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH---TCCEEEETTTTTCCSEEETTEECHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-Hhh---CCcEEEecCcCcccccccccccchHHHHHH
Confidence            3578999999999999999998888999999998877665433 333   5433322211          2445566666


Q ss_pred             HHHHHhhcC-CcccEEEecCCC
Q 033396           81 METVSSQFD-GKLNILVSSAQL  101 (120)
Q Consensus        81 ~~~~~~~~~-g~id~li~~ag~  101 (120)
                      .+++.+..+ .++|++|.++|.
T Consensus       303 ~~~i~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          303 GKRIRELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             HHHHHHHHTSCCEEEEEECSCH
T ss_pred             HHHHHHHhCCCCCcEEEEcCCc
Confidence            677766553 379999999986

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.34  E-value=2.6e-06  Score=59.83  Aligned_cols=81  Identities=14%  Similarity=0.152  Sum_probs=56.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+++++|+|++|++|...+..+...|++|+.+++++.+++... ++   +....   .|.++.+..+.+.+.. .  +.+
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~---Ga~~~---~~~~~~~~~~~~~~~~-~--~~g  209 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL---GAWET---IDYSHEDVAKRVLELT-D--GKK  209 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH---TCSEE---EETTTSCHHHHHHHHT-T--TCC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCCEE---EeCCCccHHHHHHHHh-C--CCC
Confidence            5789999999999999999999999999999999887665332 22   43322   3454443333322221 1  137


Q ss_pred             ccEEEecCCCC
Q 033396           92 LNILVSSAQLP  102 (120)
Q Consensus        92 id~li~~ag~~  102 (120)
                      +|++|+|+|..
T Consensus       210 ~Dvvid~~g~~  220 (325)
T 3jyn_A          210 CPVVYDGVGQD  220 (325)
T ss_dssp             EEEEEESSCGG
T ss_pred             ceEEEECCChH
Confidence            99999999963

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=98.31  E-value=2.4e-06  Score=60.35  Aligned_cols=82  Identities=15%  Similarity=0.126  Sum_probs=56.3

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+++++|+|+++++|...+..+...|++|+.+++++.+++.+.+    .+....   .|.++.+..+.+. +....  .+
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lga~~~---~~~~~~~~~~~~~-~~~~~--~g  213 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR----LGAAYV---IDTSTAPLYETVM-ELTNG--IG  213 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----HTCSEE---EETTTSCHHHHHH-HHTTT--SC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----CCCcEE---EeCCcccHHHHHH-HHhCC--CC
Confidence            57899999999999999999888899999999998776643332    244332   2444433222222 22111  37


Q ss_pred             ccEEEecCCCCC
Q 033396           92 LNILVSSAQLPY  103 (120)
Q Consensus        92 id~li~~ag~~~  103 (120)
                      +|++|+|+|...
T Consensus       214 ~Dvvid~~g~~~  225 (340)
T 3gms_A          214 ADAAIDSIGGPD  225 (340)
T ss_dssp             EEEEEESSCHHH
T ss_pred             CcEEEECCCChh
Confidence            999999998643

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.30  E-value=6.6e-06  Score=58.83  Aligned_cols=78  Identities=18%  Similarity=0.195  Sum_probs=56.2

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      +++++++|+|+ |++|+++++.+...|++|++++|++..++.+.+...   ..+..   ...+.+++.+.+        .
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~---~~~~~---~~~~~~~~~~~~--------~  229 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG---SRVEL---LYSNSAEIETAV--------A  229 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---GGSEE---EECCHHHHHHHH--------H
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhC---ceeEe---eeCCHHHHHHHH--------c
Confidence            66789999999 999999999999999999999999887765544321   12211   123344443333        3


Q ss_pred             cccEEEecCCCCC
Q 033396           91 KLNILVSSAQLPY  103 (120)
Q Consensus        91 ~id~li~~ag~~~  103 (120)
                      ..|++|++++...
T Consensus       230 ~~DvVI~~~~~~~  242 (361)
T 1pjc_A          230 EADLLIGAVLVPG  242 (361)
T ss_dssp             TCSEEEECCCCTT
T ss_pred             CCCEEEECCCcCC
Confidence            5899999998754

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=98.28  E-value=8.2e-06  Score=57.70  Aligned_cols=80  Identities=23%  Similarity=0.273  Sum_probs=54.6

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC-
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG-   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g-   90 (120)
                      .+++++|+|++|++|...+..+...|++|+.+++++.+.+... ++   +.... +  |..  +++.+.+   .+..++ 
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~---ga~~v-~--~~~--~~~~~~v---~~~~~~~  226 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-SV---GADIV-L--PLE--EGWAKAV---REATGGA  226 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH---TCSEE-E--ESS--TTHHHHH---HHHTTTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc---CCcEE-e--cCc--hhHHHHH---HHHhCCC
Confidence            5889999999999999999999999999999999887664332 22   44332 2  333  2222223   232223 


Q ss_pred             cccEEEecCCCCC
Q 033396           91 KLNILVSSAQLPY  103 (120)
Q Consensus        91 ~id~li~~ag~~~  103 (120)
                      ++|++|+|+|...
T Consensus       227 g~Dvvid~~g~~~  239 (342)
T 4eye_A          227 GVDMVVDPIGGPA  239 (342)
T ss_dssp             CEEEEEESCC--C
T ss_pred             CceEEEECCchhH
Confidence            6999999999754

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.27  E-value=7.8e-06  Score=58.41  Aligned_cols=74  Identities=16%  Similarity=0.116  Sum_probs=58.5

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      .+.++|.|| |++|+.+++.|++ .+.|.+.+++...++...       ..+..+.+|++|.+++.+++        .+.
T Consensus        16 ~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~-------~~~~~~~~d~~d~~~l~~~~--------~~~   78 (365)
T 3abi_A           16 HMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK-------EFATPLKVDASNFDKLVEVM--------KEF   78 (365)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT-------TTSEEEECCTTCHHHHHHHH--------TTC
T ss_pred             ccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh-------ccCCcEEEecCCHHHHHHHH--------hCC
Confidence            336889998 9999999999876 578999999987765432       23456788999999888887        568


Q ss_pred             cEEEecCCCCC
Q 033396           93 NILVSSAQLPY  103 (120)
Q Consensus        93 d~li~~ag~~~  103 (120)
                      |+||++++...
T Consensus        79 DvVi~~~p~~~   89 (365)
T 3abi_A           79 ELVIGALPGFL   89 (365)
T ss_dssp             SEEEECCCGGG
T ss_pred             CEEEEecCCcc
Confidence            99999987654

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.25  E-value=6.9e-06  Score=59.09  Aligned_cols=79  Identities=16%  Similarity=0.220  Sum_probs=58.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+.+++++|+|+ |++|+.+++.+...|++|+.+++++..++...+.+   +..+.   .+..+..++.+++        
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~---g~~~~---~~~~~~~~l~~~l--------  229 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF---CGRIH---TRYSSAYELEGAV--------  229 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTSSE---EEECCHHHHHHHH--------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc---CCeeE---eccCCHHHHHHHH--------
Confidence            478999999998 99999999999999999999999987765544322   33321   2334455555444        


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                      ...|++|++++.+.
T Consensus       230 ~~aDvVi~~~~~p~  243 (377)
T 2vhw_A          230 KRADLVIGAVLVPG  243 (377)
T ss_dssp             HHCSEEEECCCCTT
T ss_pred             cCCCEEEECCCcCC
Confidence            35799999987654

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=98.24  E-value=1.8e-05  Score=54.92  Aligned_cols=76  Identities=20%  Similarity=0.230  Sum_probs=57.9

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .++++|+++|+|+ ||.|++++..|++.|+ +|++++|+.++.+++.+++...+ .+.....  .+   +          
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~-~~~~~~~--~~---l----------  184 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG-EVKAQAF--EQ---L----------  184 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS-CEEEEEG--GG---C----------
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC-CeeEeeH--HH---h----------
Confidence            3578999999998 7999999999999995 89999999988888888776543 3333322  11   1          


Q ss_pred             cCCcccEEEecCCCC
Q 033396           88 FDGKLNILVSSAQLP  102 (120)
Q Consensus        88 ~~g~id~li~~ag~~  102 (120)
                      . ...|+|||+....
T Consensus       185 ~-~~aDiIInaTp~g  198 (281)
T 3o8q_A          185 K-QSYDVIINSTSAS  198 (281)
T ss_dssp             C-SCEEEEEECSCCC
T ss_pred             c-CCCCEEEEcCcCC
Confidence            0 3589999998664

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=98.23  E-value=8.1e-06  Score=58.17  Aligned_cols=79  Identities=14%  Similarity=0.131  Sum_probs=55.6

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+++++|+||+|++|...+..+...|++|+.+++++.+++.+.    +.|....   .|.++.+ +.+.+.+.   .+++
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~----~~Ga~~~---~~~~~~~-~~~~~~~~---~~~g  231 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK----SLGCDRP---INYKTEP-VGTVLKQE---YPEG  231 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTCSEE---EETTTSC-HHHHHHHH---CTTC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH----HcCCcEE---EecCChh-HHHHHHHh---cCCC
Confidence            5789999999999999999999999999999999876654332    2354332   2444332 33333332   2257


Q ss_pred             ccEEEecCCC
Q 033396           92 LNILVSSAQL  101 (120)
Q Consensus        92 id~li~~ag~  101 (120)
                      +|++|+|+|.
T Consensus       232 ~D~vid~~g~  241 (362)
T 2c0c_A          232 VDVVYESVGG  241 (362)
T ss_dssp             EEEEEECSCT
T ss_pred             CCEEEECCCH
Confidence            9999999986

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.18  E-value=1.3e-05  Score=56.78  Aligned_cols=80  Identities=11%  Similarity=0.088  Sum_probs=54.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      +++++|+||+|++|...+..+...|++|+.+++++.+++.+. +   .|....   .|..+.+..+ .+.+....  .++
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~---~Ga~~~---~~~~~~~~~~-~v~~~~~~--~g~  234 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-D---IGAAHV---LNEKAPDFEA-TLREVMKA--EQP  234 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-H---HTCSEE---EETTSTTHHH-HHHHHHHH--HCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-H---cCCCEE---EECCcHHHHH-HHHHHhcC--CCC
Confidence            479999999999999999988889999999999887765432 2   254332   2444433222 22222221  369


Q ss_pred             cEEEecCCCC
Q 033396           93 NILVSSAQLP  102 (120)
Q Consensus        93 d~li~~ag~~  102 (120)
                      |++|+|+|..
T Consensus       235 D~vid~~g~~  244 (349)
T 3pi7_A          235 RIFLDAVTGP  244 (349)
T ss_dssp             CEEEESSCHH
T ss_pred             cEEEECCCCh
Confidence            9999999854

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.10  E-value=8.8e-06  Score=52.47  Aligned_cols=78  Identities=21%  Similarity=0.172  Sum_probs=55.2

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      +.++.++|.|+ |.+|..+++.|.+. |++|++++++++..+...    ..+.  ..+.+|.++++.+.++     ... 
T Consensus        37 ~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~----~~g~--~~~~gd~~~~~~l~~~-----~~~-  103 (183)
T 3c85_A           37 PGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHR----SEGR--NVISGDATDPDFWERI-----LDT-  103 (183)
T ss_dssp             CTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH----HTTC--CEEECCTTCHHHHHTB-----CSC-
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH----HCCC--CEEEcCCCCHHHHHhc-----cCC-
Confidence            45667888885 99999999999999 999999999987654432    2343  3456788887654332     012 


Q ss_pred             CcccEEEecCCC
Q 033396           90 GKLNILVSSAQL  101 (120)
Q Consensus        90 g~id~li~~ag~  101 (120)
                      ...|.+|.+.+-
T Consensus       104 ~~ad~vi~~~~~  115 (183)
T 3c85_A          104 GHVKLVLLAMPH  115 (183)
T ss_dssp             CCCCEEEECCSS
T ss_pred             CCCCEEEEeCCC
Confidence            567888887764

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=98.10  E-value=4e-05  Score=54.04  Aligned_cols=77  Identities=19%  Similarity=0.222  Sum_probs=54.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+++++|+|+ |++|...+..+...|++|+.+++++.+++...    +.+...   ..|.++.+ +.+.+.+   .. ++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~---~~d~~~~~-~~~~~~~---~~-~~  230 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK----ELGADL---VVNPLKED-AAKFMKE---KV-GG  230 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH----HTTCSE---EECTTTSC-HHHHHHH---HH-SS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HCCCCE---EecCCCcc-HHHHHHH---Hh-CC
Confidence            5789999999 78999999999999999999999887765332    234432   24665433 2222222   22 57


Q ss_pred             ccEEEecCCC
Q 033396           92 LNILVSSAQL  101 (120)
Q Consensus        92 id~li~~ag~  101 (120)
                      +|++|+++|.
T Consensus       231 ~d~vid~~g~  240 (339)
T 1rjw_A          231 VHAAVVTAVS  240 (339)
T ss_dssp             EEEEEESSCC
T ss_pred             CCEEEECCCC
Confidence            9999999996

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.10  E-value=1.9e-05  Score=49.65  Aligned_cols=78  Identities=12%  Similarity=0.058  Sum_probs=55.3

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHH-hcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK-SKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ..++.++|.|+ |.+|..+++.|.+.|++|+++++++...+.    +. ..+  ...+..|.++++.+.++      .. 
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~----~~~~~g--~~~~~~d~~~~~~l~~~------~~-   82 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHR----LNSEFS--GFTVVGDAAEFETLKEC------GM-   82 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGG----SCTTCC--SEEEESCTTSHHHHHTT------TG-
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH----HHhcCC--CcEEEecCCCHHHHHHc------Cc-
Confidence            56778999996 999999999999999999999998765432    22 223  33556777776543321      12 


Q ss_pred             CcccEEEecCCCC
Q 033396           90 GKLNILVSSAQLP  102 (120)
Q Consensus        90 g~id~li~~ag~~  102 (120)
                      .+.|++|.+.+..
T Consensus        83 ~~ad~Vi~~~~~~   95 (155)
T 2g1u_A           83 EKADMVFAFTNDD   95 (155)
T ss_dssp             GGCSEEEECSSCH
T ss_pred             ccCCEEEEEeCCc
Confidence            4678888888753

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.10  E-value=8.7e-06  Score=57.54  Aligned_cols=80  Identities=15%  Similarity=0.169  Sum_probs=54.7

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCC-------EEEEeeCC----hHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHH
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGA-------IVHTCSRN----ETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLM   81 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~-------~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   81 (120)
                      ...++||||+|++|.+++..|+..+.       .|+++|++    ...++.....+........   .|+....+....+
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~---~~i~~~~~~~~al   81 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLL---AGMTAHADPMTAF   81 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTE---EEEEEESSHHHHT
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccccc---CcEEEecCcHHHh
Confidence            34699999999999999999999884       79999988    4445444444543211111   2443333334444


Q ss_pred             HHHHhhcCCcccEEEecCCCCC
Q 033396           82 ETVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        82 ~~~~~~~~g~id~li~~ag~~~  103 (120)
                              ...|++|+.||.+.
T Consensus        82 --------~~aD~Vi~~ag~~~   95 (329)
T 1b8p_A           82 --------KDADVALLVGARPR   95 (329)
T ss_dssp             --------TTCSEEEECCCCCC
T ss_pred             --------CCCCEEEEeCCCCC
Confidence                    57899999999876

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=98.09  E-value=3.1e-05  Score=54.77  Aligned_cols=79  Identities=16%  Similarity=0.184  Sum_probs=55.0

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+++++|+||+|++|...+..+...|++|+.+++++.+++.+. +   .|....   .|..+  ++.+.+.+.   .+++
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~---lGa~~v---i~~~~--~~~~~~~~~---~~~g  217 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTK-K---MGADIV---LNHKE--SLLNQFKTQ---GIEL  217 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHH-H---HTCSEE---ECTTS--CHHHHHHHH---TCCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-h---cCCcEE---EECCc--cHHHHHHHh---CCCC
Confidence            6889999999999999999998899999999999877654333 2   344322   23332  222223332   2257


Q ss_pred             ccEEEecCCCC
Q 033396           92 LNILVSSAQLP  102 (120)
Q Consensus        92 id~li~~ag~~  102 (120)
                      +|++|+++|..
T Consensus       218 ~Dvv~d~~g~~  228 (346)
T 3fbg_A          218 VDYVFCTFNTD  228 (346)
T ss_dssp             EEEEEESSCHH
T ss_pred             ccEEEECCCch
Confidence            99999999853

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.09  E-value=4.3e-05  Score=53.97  Aligned_cols=76  Identities=14%  Similarity=0.224  Sum_probs=52.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhcCC--eEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKSKGL--QVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ..++||||+|++|..++..|+.+|  .+|+++++++.  +....++.....  .+..    +++..++..++        
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~----~~~t~d~~~al--------   74 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG----FLGQQQLEAAL--------   74 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE----EESHHHHHHHH--------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE----EeCCCCHHHHc--------
Confidence            469999999999999999999988  78999998765  222333433221  2222    22334455555        


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                      ...|++|+++|.+.
T Consensus        75 ~gaDvVi~~ag~~~   88 (326)
T 1smk_A           75 TGMDLIIVPAGVPR   88 (326)
T ss_dssp             TTCSEEEECCCCCC
T ss_pred             CCCCEEEEcCCcCC
Confidence            57899999999876

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.08  E-value=2.1e-05  Score=52.11  Aligned_cols=74  Identities=9%  Similarity=0.062  Sum_probs=55.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   94 (120)
                      .++|.|+ |.+|..+++.|.+.|++|++++++++..+...+.   .+  +.++.+|.++++.+.++      .. ...|+
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~---~~--~~~i~gd~~~~~~l~~a------~i-~~ad~   68 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK---LK--ATIIHGDGSHKEILRDA------EV-SKNDV   68 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH---SS--SEEEESCTTSHHHHHHH------TC-CTTCE
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH---cC--CeEEEcCCCCHHHHHhc------Cc-ccCCE
Confidence            3788996 8999999999999999999999998776554432   12  45678899998765543      12 46778


Q ss_pred             EEecCCC
Q 033396           95 LVSSAQL  101 (120)
Q Consensus        95 li~~ag~  101 (120)
                      +|.+.+-
T Consensus        69 vi~~~~~   75 (218)
T 3l4b_C           69 VVILTPR   75 (218)
T ss_dssp             EEECCSC
T ss_pred             EEEecCC
Confidence            7777654

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.08  E-value=3.4e-05  Score=47.76  Aligned_cols=75  Identities=15%  Similarity=0.084  Sum_probs=55.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      +.++|.|+ |.+|..+++.|.+.|++|++++++++..+...    ..+  +.++.+|.++++.+.++      .. ...|
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~----~~g--~~~i~gd~~~~~~l~~a------~i-~~ad   73 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELR----ERG--VRAVLGNAANEEIMQLA------HL-ECAK   73 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----HTT--CEEEESCTTSHHHHHHT------TG-GGCS
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----HcC--CCEEECCCCCHHHHHhc------Cc-ccCC
Confidence            34777786 88999999999999999999999987765443    234  34677899998765443      12 4678


Q ss_pred             EEEecCCCC
Q 033396           94 ILVSSAQLP  102 (120)
Q Consensus        94 ~li~~ag~~  102 (120)
                      .+|.+.+-.
T Consensus        74 ~vi~~~~~~   82 (140)
T 3fwz_A           74 WLILTIPNG   82 (140)
T ss_dssp             EEEECCSCH
T ss_pred             EEEEECCCh
Confidence            888777643

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=98.06  E-value=3.9e-05  Score=54.21  Aligned_cols=77  Identities=21%  Similarity=0.301  Sum_probs=52.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+++++|+||+|++|...+..+...|++|+.+ +++.+++.+ .+   .|...    .| .+.+ +...+.+....  .+
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~---lGa~~----i~-~~~~-~~~~~~~~~~~--~g  216 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RD---LGATP----ID-ASRE-PEDYAAEHTAG--QG  216 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HH---HTSEE----EE-TTSC-HHHHHHHHHTT--SC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HH---cCCCE----ec-cCCC-HHHHHHHHhcC--CC
Confidence            57899999999999999999999999999998 666554322 22   35443    23 3322 22233322221  47


Q ss_pred             ccEEEecCCC
Q 033396           92 LNILVSSAQL  101 (120)
Q Consensus        92 id~li~~ag~  101 (120)
                      +|++|.++|-
T Consensus       217 ~D~vid~~g~  226 (343)
T 3gaz_A          217 FDLVYDTLGG  226 (343)
T ss_dssp             EEEEEESSCT
T ss_pred             ceEEEECCCc
Confidence            9999999995

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=98.05  E-value=3.2e-05  Score=55.17  Aligned_cols=77  Identities=18%  Similarity=0.216  Sum_probs=55.4

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+.+++|+|+ |++|...+..+...|++|+.+++++.+.+...++   .|....   .|..+.+.+.       +.. ++
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~---lGa~~v---~~~~~~~~~~-------~~~-~~  251 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKN---FGADSF---LVSRDQEQMQ-------AAA-GT  251 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHT---SCCSEE---EETTCHHHHH-------HTT-TC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---cCCceE---EeccCHHHHH-------Hhh-CC
Confidence            6889999996 9999999999988999999999988766543322   354322   3555543322       223 57


Q ss_pred             ccEEEecCCCCC
Q 033396           92 LNILVSSAQLPY  103 (120)
Q Consensus        92 id~li~~ag~~~  103 (120)
                      +|++|+++|...
T Consensus       252 ~D~vid~~g~~~  263 (366)
T 1yqd_A          252 LDGIIDTVSAVH  263 (366)
T ss_dssp             EEEEEECCSSCC
T ss_pred             CCEEEECCCcHH
Confidence            999999999753

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.03  E-value=5.4e-06  Score=51.63  Aligned_cols=73  Identities=10%  Similarity=0.127  Sum_probs=54.1

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+++++|.|+ |++|..+++.|.+.|++|++++|+++..++..+++   +..+.    ...+   +..++        ..
T Consensus        20 ~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~---~~~~~----~~~~---~~~~~--------~~   80 (144)
T 3oj0_A           20 GGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY---EYEYV----LIND---IDSLI--------KN   80 (144)
T ss_dssp             CCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH---TCEEE----ECSC---HHHHH--------HT
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh---CCceE----eecC---HHHHh--------cC
Confidence            4889999997 99999999999999999999999988877666554   32211    2233   23333        35


Q ss_pred             ccEEEecCCCCC
Q 033396           92 LNILVSSAQLPY  103 (120)
Q Consensus        92 id~li~~ag~~~  103 (120)
                      .|++|++++...
T Consensus        81 ~Divi~at~~~~   92 (144)
T 3oj0_A           81 NDVIITATSSKT   92 (144)
T ss_dssp             CSEEEECSCCSS
T ss_pred             CCEEEEeCCCCC
Confidence            799999998764

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=98.03  E-value=3.4e-05  Score=52.50  Aligned_cols=82  Identities=16%  Similarity=0.213  Sum_probs=59.6

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCCh-------------------HHHHHHHHHHHhc--CCeEEEE
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE-------------------TELNQRIQEWKSK--GLQVSGN   67 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~~~~~--~~~~~~~   67 (120)
                      .++++.++|.|+ ||+|..+++.|+..|. ++.++|++.                   .+.+...+.+...  ...+..+
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  106 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  106 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence            367889999997 7999999999999995 899999886                   5666666666654  3455666


Q ss_pred             eccCCCHHHHHHHHHHHHhhcCCcccEEEecCCC
Q 033396           68 ACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL  101 (120)
Q Consensus        68 ~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  101 (120)
                      ..++++ +.+..++        ...|+||.+..-
T Consensus       107 ~~~~~~-~~~~~~~--------~~~DvVi~~~d~  131 (249)
T 1jw9_B          107 NALLDD-AELAALI--------AEHDLVLDCTDN  131 (249)
T ss_dssp             CSCCCH-HHHHHHH--------HTSSEEEECCSS
T ss_pred             eccCCH-hHHHHHH--------hCCCEEEEeCCC
Confidence            655653 3344443        457888888754

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.97  E-value=6.7e-05  Score=53.42  Aligned_cols=75  Identities=20%  Similarity=0.258  Sum_probs=52.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh---HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE---TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ++++++|+|+ |++|..++..+...|++|+.+++++   .+.+ ...++   +...  +  | ++ + +.+.+.+ .  .
T Consensus       180 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-~~~~~---ga~~--v--~-~~-~-~~~~~~~-~--~  244 (366)
T 2cdc_A          180 NCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQT-VIEET---KTNY--Y--N-SS-N-GYDKLKD-S--V  244 (366)
T ss_dssp             TTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHH-HHHHH---TCEE--E--E-CT-T-CSHHHHH-H--H
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHH-HHHHh---CCce--e--c-hH-H-HHHHHHH-h--C
Confidence            3899999999 9999999999988999999999987   5543 22233   4432  2  4 43 2 2222222 1  1


Q ss_pred             CCcccEEEecCCCC
Q 033396           89 DGKLNILVSSAQLP  102 (120)
Q Consensus        89 ~g~id~li~~ag~~  102 (120)
                       +++|++|+++|..
T Consensus       245 -~~~d~vid~~g~~  257 (366)
T 2cdc_A          245 -GKFDVIIDATGAD  257 (366)
T ss_dssp             -CCEEEEEECCCCC
T ss_pred             -CCCCEEEECCCCh
Confidence             5799999999975

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.93  E-value=0.00015  Score=51.39  Aligned_cols=84  Identities=15%  Similarity=0.105  Sum_probs=57.6

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCE-EEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .|.+++|.|+ |++|...+......|++ |+.+++++.+++.. +++   ...+..+..|-.+.+++.+.+.+...  +.
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l---~~~~~~~~~~~~~~~~~~~~v~~~t~--g~  251 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFA-KEI---CPEVVTHKVERLSAEESAKKIVESFG--GI  251 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHH-HHH---CTTCEEEECCSCCHHHHHHHHHHHTS--SC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh---chhcccccccccchHHHHHHHHHHhC--CC
Confidence            5788999998 99999999888889987 88999888776533 333   33344444554455554444433322  14


Q ss_pred             cccEEEecCCCC
Q 033396           91 KLNILVSSAQLP  102 (120)
Q Consensus        91 ~id~li~~ag~~  102 (120)
                      ++|++|.++|..
T Consensus       252 g~Dvvid~~g~~  263 (363)
T 3m6i_A          252 EPAVALECTGVE  263 (363)
T ss_dssp             CCSEEEECSCCH
T ss_pred             CCCEEEECCCCh
Confidence            799999999864

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.92  E-value=5.7e-05  Score=53.14  Aligned_cols=95  Identities=15%  Similarity=0.095  Sum_probs=61.7

Q ss_pred             ccCcE-EEEecCCC-----------------c-hHHHHHHHHHHCCCEEEEeeCChH--H------HHHHHHHHHh---c
Q 033396           11 LKGMT-ALVTGGTK-----------------G-IGYAVVEELAAFGAIVHTCSRNET--E------LNQRIQEWKS---K   60 (120)
Q Consensus        11 ~~~~~-~litGa~~-----------------~-ig~~~a~~l~~~g~~v~~~~~~~~--~------~~~~~~~~~~---~   60 (120)
                      +.||. ++||+|..                 | .|.++|+++++.|+.|+++.+...  .      .....+.+..   .
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~  113 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPA  113 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhcccccc
Confidence            57777 99997753                 4 999999999999999999977421  1      0011111111   1


Q ss_pred             CCeEEEEeccCCCHHHHHHHHHHH------------------------------HhhcCCcccEEEecCCCCCccc
Q 033396           61 GLQVSGNACDLKIRAQREKLMETV------------------------------SSQFDGKLNILVSSAQLPYSQR  106 (120)
Q Consensus        61 ~~~~~~~~~D~~~~~~~~~~~~~~------------------------------~~~~~g~id~li~~ag~~~~~~  106 (120)
                      ...+..+..|+.+..++.+++.+.                              .+.+ ++.|++|.+|++..+.+
T Consensus       114 ~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~-~~~di~i~aAAVsDf~~  188 (313)
T 1p9o_A          114 LSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPL-GPSAMFYLAAAVSDFYV  188 (313)
T ss_dssp             CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGG-GGGEEEEECSBCCSEEC
T ss_pred             ccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhcc-CCCCEEEECCchhhccC
Confidence            122445566676666666555433                              2445 68999999999988643

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.91  E-value=7.4e-05  Score=53.36  Aligned_cols=77  Identities=17%  Similarity=0.302  Sum_probs=52.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+++++|+||+|++|...+..+...|++|+.+++ +.+.+. .   ++.|....   .|.++.+..+    ++.+ . ++
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~-~---~~lGa~~v---~~~~~~~~~~----~~~~-~-~g  248 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASEL-V---RKLGADDV---IDYKSGSVEE----QLKS-L-KP  248 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHH-H---HHTTCSEE---EETTSSCHHH----HHHT-S-CC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHH-H---HHcCCCEE---EECCchHHHH----HHhh-c-CC
Confidence            5789999999999999999888889999988884 444332 2   23354332   2444433222    2222 2 57


Q ss_pred             ccEEEecCCCC
Q 033396           92 LNILVSSAQLP  102 (120)
Q Consensus        92 id~li~~ag~~  102 (120)
                      +|++|+++|..
T Consensus       249 ~D~vid~~g~~  259 (375)
T 2vn8_A          249 FDFILDNVGGS  259 (375)
T ss_dssp             BSEEEESSCTT
T ss_pred             CCEEEECCCCh
Confidence            99999999976

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.89  E-value=3.3e-05  Score=57.31  Aligned_cols=45  Identities=22%  Similarity=0.174  Sum_probs=39.1

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRI   54 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~   54 (120)
                      +++.||+++|||++ +||+++++.|+..|++|+++++++....+..
T Consensus       261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa  305 (488)
T 3ond_A          261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQAT  305 (488)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            35789999999987 9999999999999999999999886654443

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.89  E-value=6.6e-05  Score=52.01  Aligned_cols=74  Identities=19%  Similarity=0.244  Sum_probs=52.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCC-HHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKI-RAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~g   90 (120)
                      .+++++|+|++|++|...+..+...|++|+.+++++.+.+.. .+   .+....   .|.++ .+ +   .+++     +
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~---~ga~~~---~~~~~~~~-~---~~~~-----~  188 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP-LA---LGAEEA---ATYAEVPE-R---AKAW-----G  188 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH-HH---TTCSEE---EEGGGHHH-H---HHHT-----T
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hh---cCCCEE---EECCcchh-H---HHHh-----c
Confidence            578999999999999999999989999999999987765433 22   343322   34443 22 1   2222     4


Q ss_pred             cccEEEecCCCC
Q 033396           91 KLNILVSSAQLP  102 (120)
Q Consensus        91 ~id~li~~ag~~  102 (120)
                      ++|++|+ +|..
T Consensus       189 ~~d~vid-~g~~  199 (302)
T 1iz0_A          189 GLDLVLE-VRGK  199 (302)
T ss_dssp             SEEEEEE-CSCT
T ss_pred             CceEEEE-CCHH
Confidence            6899999 8863

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.87  E-value=7e-05  Score=51.70  Aligned_cols=75  Identities=12%  Similarity=0.117  Sum_probs=56.5

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .++++|+++|+|+ ||.|++++..|++.|+ +|++++|+.++.+++.+++..  ..+....  ..+..          . 
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~--~~~~~~~--~~~l~----------~-  179 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH--SRLRISR--YEALE----------G-  179 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC--TTEEEEC--SGGGT----------T-
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc--CCeeEee--HHHhc----------c-
Confidence            3578999999998 7999999999999995 899999999888888777654  2333332  22111          0 


Q ss_pred             cCCcccEEEecCCC
Q 033396           88 FDGKLNILVSSAQL  101 (120)
Q Consensus        88 ~~g~id~li~~ag~  101 (120)
                        ...|+|||+...
T Consensus       180 --~~~DivInaTp~  191 (272)
T 3pwz_A          180 --QSFDIVVNATSA  191 (272)
T ss_dssp             --CCCSEEEECSSG
T ss_pred             --cCCCEEEECCCC
Confidence              358999999765

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.85  E-value=8.9e-05  Score=52.60  Aligned_cols=87  Identities=13%  Similarity=0.079  Sum_probs=51.4

Q ss_pred             cC-cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCH--HHHHHHHHHHHhhc
Q 033396           12 KG-MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR--AQREKLMETVSSQF   88 (120)
Q Consensus        12 ~~-~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~   88 (120)
                      .+ .+++|+|++|++|...+......|++|+.+.++..+..+..+.+++.|....+   |..+.  +++.+.+.+...+.
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi---~~~~~~~~~~~~~i~~~t~~~  242 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVI---TEDQNNSREFGPTIKEWIKQS  242 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEE---EHHHHHCGGGHHHHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEE---ecCccchHHHHHHHHHHhhcc
Confidence            46 89999999999999988877778999888876654422222222333543322   22110  11222222222001


Q ss_pred             CCcccEEEecCCC
Q 033396           89 DGKLNILVSSAQL  101 (120)
Q Consensus        89 ~g~id~li~~ag~  101 (120)
                      ++++|++|.++|.
T Consensus       243 ~~g~Dvvid~~G~  255 (364)
T 1gu7_A          243 GGEAKLALNCVGG  255 (364)
T ss_dssp             TCCEEEEEESSCH
T ss_pred             CCCceEEEECCCc
Confidence            2579999999885

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.84  E-value=8.9e-05  Score=53.75  Aligned_cols=74  Identities=20%  Similarity=0.300  Sum_probs=53.4

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      +.+++++|.|+ |++|..+++.+...|+ +|++++|+..+.++...++   +..  .  .+.   +++..++        
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~---g~~--~--~~~---~~l~~~l--------  225 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL---GGE--A--VRF---DELVDHL--------  225 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH---TCE--E--CCG---GGHHHHH--------
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc---CCc--e--ecH---HhHHHHh--------
Confidence            67999999998 9999999999999998 8999999987765555544   332  1  122   2233333        


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                      ...|++|++++...
T Consensus       226 ~~aDvVi~at~~~~  239 (404)
T 1gpj_A          226 ARSDVVVSATAAPH  239 (404)
T ss_dssp             HTCSEEEECCSSSS
T ss_pred             cCCCEEEEccCCCC
Confidence            35788888887544

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.82  E-value=0.00021  Score=50.87  Aligned_cols=79  Identities=16%  Similarity=0.169  Sum_probs=53.7

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+.+++|+| +|++|...+..+...|++|+.+++++.+++.+ ++   .|....+   | .+.+++.+.+.+....  .+
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~---lGa~~vi---~-~~~~~~~~~v~~~~~g--~g  257 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FA---LGADHGI---N-RLEEDWVERVYALTGD--RG  257 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HH---HTCSEEE---E-TTTSCHHHHHHHHHTT--CC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HH---cCCCEEE---c-CCcccHHHHHHHHhCC--CC
Confidence            578999999 79999999988888999999999988766543 32   3543322   3 3322233333332221  37


Q ss_pred             ccEEEecCCC
Q 033396           92 LNILVSSAQL  101 (120)
Q Consensus        92 id~li~~ag~  101 (120)
                      +|++|.++|-
T Consensus       258 ~D~vid~~g~  267 (363)
T 3uog_A          258 ADHILEIAGG  267 (363)
T ss_dssp             EEEEEEETTS
T ss_pred             ceEEEECCCh
Confidence            9999999994

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.82  E-value=0.00034  Score=48.77  Aligned_cols=91  Identities=10%  Similarity=0.245  Sum_probs=65.1

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCCh------------------HHHHHHHHHHHhc--CCeEEEEe
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNE------------------TELNQRIQEWKSK--GLQVSGNA   68 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~------------------~~~~~~~~~~~~~--~~~~~~~~   68 (120)
                      .++++.++|.|+ ||+|.++++.|+..| -++.++|.+.                  .+.+...+.+.+.  ..++..+.
T Consensus        33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~  111 (292)
T 3h8v_A           33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHN  111 (292)
T ss_dssp             GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEec
Confidence            467889999988 899999999999999 6788888764                  4455555566554  45677777


Q ss_pred             ccCCCHHHHHHHHHHHHhh-cC--CcccEEEecCCC
Q 033396           69 CDLKIRAQREKLMETVSSQ-FD--GKLNILVSSAQL  101 (120)
Q Consensus        69 ~D~~~~~~~~~~~~~~~~~-~~--g~id~li~~ag~  101 (120)
                      .++++.+.++.+++.+... +.  .+.|+||.+.--
T Consensus       112 ~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn  147 (292)
T 3h8v_A          112 YNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDN  147 (292)
T ss_dssp             CCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSS
T ss_pred             ccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcc
Confidence            7888766677666544221 10  368999987754

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.79  E-value=0.00017  Score=50.99  Aligned_cols=79  Identities=14%  Similarity=0.151  Sum_probs=53.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .+.+++|+|+ |++|...+..+...|+ +|+.+++++.+++.. .++   +....   .|.++++ +.+.+.+...  +.
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~-~~~---Ga~~~---~~~~~~~-~~~~v~~~~~--g~  235 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELA-KKV---GADYV---INPFEED-VVKEVMDITD--GN  235 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHH-HHH---TCSEE---ECTTTSC-HHHHHHHHTT--TS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh---CCCEE---ECCCCcC-HHHHHHHHcC--CC
Confidence            6889999999 9999999998888998 899999987665433 233   43322   3444433 2222222211  13


Q ss_pred             cccEEEecCCC
Q 033396           91 KLNILVSSAQL  101 (120)
Q Consensus        91 ~id~li~~ag~  101 (120)
                      ++|++|+++|.
T Consensus       236 g~D~vid~~g~  246 (348)
T 2d8a_A          236 GVDVFLEFSGA  246 (348)
T ss_dssp             CEEEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            69999999986

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.76  E-value=0.00043  Score=48.94  Aligned_cols=83  Identities=23%  Similarity=0.327  Sum_probs=53.2

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCC-HHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKI-RAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~g   90 (120)
                      .+.+++|+|+ |++|...+..+...|++|+.+++++.+++.+ .   +.|....   .|.++ .+..+++.+......++
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~---~lGa~~~---~~~~~~~~~~~~i~~~~~~~~g~  239 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVA-K---NCGADVT---LVVDPAKEEESSIIERIRSAIGD  239 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-H---HTTCSEE---EECCTTTSCHHHHHHHHHHHSSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-H---HhCCCEE---EcCcccccHHHHHHHHhccccCC
Confidence            5789999997 8999999988888999999999887665433 2   2354422   23432 22222222221100114


Q ss_pred             cccEEEecCCCC
Q 033396           91 KLNILVSSAQLP  102 (120)
Q Consensus        91 ~id~li~~ag~~  102 (120)
                      ++|++|+++|..
T Consensus       240 g~D~vid~~g~~  251 (352)
T 1e3j_A          240 LPNVTIDCSGNE  251 (352)
T ss_dssp             CCSEEEECSCCH
T ss_pred             CCCEEEECCCCH
Confidence            699999999864

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.74  E-value=1.1e-05  Score=55.80  Aligned_cols=41  Identities=17%  Similarity=0.302  Sum_probs=36.4

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELN   51 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~   51 (120)
                      ++++|+++|+|+ ||.|++++..|++.|+ +|++++|+.++.+
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~  155 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFN  155 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGT
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHH
Confidence            578999999998 7999999999999998 8999999986644

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.73  E-value=0.00066  Score=48.55  Aligned_cols=81  Identities=15%  Similarity=0.169  Sum_probs=54.4

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCC--CHHHHHHHHHHHHhhc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLK--IRAQREKLMETVSSQF   88 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~~~   88 (120)
                      .+.+++|+| +|++|...+..+...| ++|+.+++++++++.+.    +.|... .+  |..  +.+++.+.+.   +..
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~----~lGa~~-vi--~~~~~~~~~~~~~v~---~~~  263 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE----EIGADL-TL--NRRETSVEERRKAIM---DIT  263 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH----HTTCSE-EE--ETTTSCHHHHHHHHH---HHT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH----HcCCcE-EE--eccccCcchHHHHHH---HHh
Confidence            578999999 8999999998888899 69999999887654332    335432 22  333  1333333333   322


Q ss_pred             CC-cccEEEecCCCCC
Q 033396           89 DG-KLNILVSSAQLPY  103 (120)
Q Consensus        89 ~g-~id~li~~ag~~~  103 (120)
                      ++ ++|++|.++|...
T Consensus       264 ~g~g~Dvvid~~g~~~  279 (380)
T 1vj0_A          264 HGRGADFILEATGDSR  279 (380)
T ss_dssp             TTSCEEEEEECSSCTT
T ss_pred             CCCCCcEEEECCCCHH
Confidence            22 6999999999753

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.72  E-value=0.0004  Score=48.84  Aligned_cols=78  Identities=21%  Similarity=0.299  Sum_probs=54.0

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+.+++|+|+ |++|...+..+...|++|+.+++++++++..    ++.|....   .|..+.+..+.+.+    .. ++
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~~lGa~~~---i~~~~~~~~~~~~~----~~-g~  232 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA----RRLGAEVA---VNARDTDPAAWLQK----EI-GG  232 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHTTCSEE---EETTTSCHHHHHHH----HH-SS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH----HHcCCCEE---EeCCCcCHHHHHHH----hC-CC
Confidence            6789999997 8999999988888999999999988766532    23454433   24444332222222    23 67


Q ss_pred             ccEEEecCCCC
Q 033396           92 LNILVSSAQLP  102 (120)
Q Consensus        92 id~li~~ag~~  102 (120)
                      +|++|.++|..
T Consensus       233 ~d~vid~~g~~  243 (340)
T 3s2e_A          233 AHGVLVTAVSP  243 (340)
T ss_dssp             EEEEEESSCCH
T ss_pred             CCEEEEeCCCH
Confidence            99999998753

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.71  E-value=0.00038  Score=49.63  Aligned_cols=79  Identities=16%  Similarity=0.193  Sum_probs=52.6

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      -.+.+++|.|++|++|...+......|++|+.+. ++.+++ ..+   +.|....   .|..+.+ +   .+++.+..++
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~---~lGa~~v---i~~~~~~-~---~~~v~~~t~g  230 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAK---SRGAEEV---FDYRAPN-L---AQTIRTYTKN  230 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHH---HTTCSEE---EETTSTT-H---HHHHHHHTTT
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHH---HcCCcEE---EECCCch-H---HHHHHHHccC
Confidence            4678999999999999999998888999988886 444443 222   3354322   2444433 2   2233333335


Q ss_pred             cccEEEecCCC
Q 033396           91 KLNILVSSAQL  101 (120)
Q Consensus        91 ~id~li~~ag~  101 (120)
                      ++|++|.++|.
T Consensus       231 ~~d~v~d~~g~  241 (371)
T 3gqv_A          231 NLRYALDCITN  241 (371)
T ss_dssp             CCCEEEESSCS
T ss_pred             CccEEEECCCc
Confidence            69999999986

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.70  E-value=8.6e-05  Score=51.96  Aligned_cols=77  Identities=19%  Similarity=0.151  Sum_probs=50.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   94 (120)
                      +++|+|++|++|...+..+...|++|+.+++++.+++.+ +   +.|....   .|.++.+  ...+.++   .++++|+
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~-~---~lGa~~~---i~~~~~~--~~~~~~~---~~~~~d~  219 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL-R---VLGAKEV---LAREDVM--AERIRPL---DKQRWAA  219 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH-H---HTTCSEE---EECC-----------C---CSCCEEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-H---HcCCcEE---EecCCcH--HHHHHHh---cCCcccE
Confidence            799999999999999998888999999999887665433 2   2354322   2444332  1222222   1247999


Q ss_pred             EEecCCCCC
Q 033396           95 LVSSAQLPY  103 (120)
Q Consensus        95 li~~ag~~~  103 (120)
                      +|+++|...
T Consensus       220 vid~~g~~~  228 (328)
T 1xa0_A          220 AVDPVGGRT  228 (328)
T ss_dssp             EEECSTTTT
T ss_pred             EEECCcHHH
Confidence            999998743

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.68  E-value=0.00033  Score=49.76  Aligned_cols=79  Identities=18%  Similarity=0.172  Sum_probs=54.0

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .+.+++|+|+ |++|...+...... |++|+.+++++.+++.+.    +.|....   .|..++  +.+.+.+...  +.
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~v---i~~~~~--~~~~v~~~~~--g~  253 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE----RLGADHV---VDARRD--PVKQVMELTR--GR  253 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH----HTTCSEE---EETTSC--HHHHHHHHTT--TC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH----HhCCCEE---Eeccch--HHHHHHHHhC--CC
Confidence            5789999999 89999988877778 999999999877654332    2354332   244443  3333333322  12


Q ss_pred             cccEEEecCCCC
Q 033396           91 KLNILVSSAQLP  102 (120)
Q Consensus        91 ~id~li~~ag~~  102 (120)
                      ++|++|.++|..
T Consensus       254 g~Dvvid~~G~~  265 (359)
T 1h2b_A          254 GVNVAMDFVGSQ  265 (359)
T ss_dssp             CEEEEEESSCCH
T ss_pred             CCcEEEECCCCc
Confidence            799999999976

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.64  E-value=0.00013  Score=48.64  Aligned_cols=73  Identities=10%  Similarity=0.007  Sum_probs=52.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      .+.++|.|+ |.+|..+++.|.+.|+ |+++++++...+...     .+  +.++.+|.++++.+.++      .. ...
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~~--~~~i~gd~~~~~~l~~a------~i-~~a   72 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----SG--ANFVHGDPTRVSDLEKA------NV-RGA   72 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----TT--CEEEESCTTCHHHHHHT------TC-TTC
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----cC--CeEEEcCCCCHHHHHhc------Cc-chh
Confidence            456888887 8999999999999999 999999876654332     22  56788999988765543      11 456


Q ss_pred             cEEEecCCC
Q 033396           93 NILVSSAQL  101 (120)
Q Consensus        93 d~li~~ag~  101 (120)
                      |.+|.+.+-
T Consensus        73 d~vi~~~~~   81 (234)
T 2aef_A           73 RAVIVDLES   81 (234)
T ss_dssp             SEEEECCSC
T ss_pred             cEEEEcCCC
Confidence            777776653

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.63  E-value=0.00036  Score=49.69  Aligned_cols=79  Identities=18%  Similarity=0.138  Sum_probs=52.1

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHH-CCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAA-FGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .+.+++|+||+|++|...+..+.. .|++|+.+++++.+.+.+    .+.|....   .|..+  ++   .+++.+..++
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~----~~lGad~v---i~~~~--~~---~~~v~~~~~~  238 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV----KSLGAHHV---IDHSK--PL---AAEVAALGLG  238 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH----HHTTCSEE---ECTTS--CH---HHHHHTTCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH----HHcCCCEE---EeCCC--CH---HHHHHHhcCC
Confidence            578999999999999887766655 589999999987665433    22354332   23332  12   2233332325


Q ss_pred             cccEEEecCCCC
Q 033396           91 KLNILVSSAQLP  102 (120)
Q Consensus        91 ~id~li~~ag~~  102 (120)
                      ++|++|.++|..
T Consensus       239 g~Dvvid~~g~~  250 (363)
T 4dvj_A          239 APAFVFSTTHTD  250 (363)
T ss_dssp             CEEEEEECSCHH
T ss_pred             CceEEEECCCch
Confidence            799999998853

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.62  E-value=0.0002  Score=50.77  Aligned_cols=76  Identities=17%  Similarity=0.175  Sum_probs=52.7

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+.+++|+|+ |++|...+..+...|++|+.+++++++.+...+   +.|....   .|..+.+.+.       +.. ++
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~---~lGa~~v---i~~~~~~~~~-------~~~-~g  244 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQ---DLGADDY---VIGSDQAKMS-------ELA-DS  244 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHT---TSCCSCE---EETTCHHHHH-------HST-TT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH---HcCCcee---eccccHHHHH-------Hhc-CC
Confidence            6789999995 999999998888889999999988766543332   2354322   2444433222       222 57


Q ss_pred             ccEEEecCCCC
Q 033396           92 LNILVSSAQLP  102 (120)
Q Consensus        92 id~li~~ag~~  102 (120)
                      +|++|.++|..
T Consensus       245 ~D~vid~~g~~  255 (357)
T 2cf5_A          245 LDYVIDTVPVH  255 (357)
T ss_dssp             EEEEEECCCSC
T ss_pred             CCEEEECCCCh
Confidence            99999999965

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.59  E-value=0.00047  Score=49.10  Aligned_cols=79  Identities=15%  Similarity=0.162  Sum_probs=53.0

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCC-HHHHHHHHHHHHhhcC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKI-RAQREKLMETVSSQFD   89 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   89 (120)
                      .+.+++|+|+ |++|...+..+...|+ +|+.+++++.+++.+.    +.|....   .|.++ .+++.+.+.+...   
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~----~lGa~~v---i~~~~~~~~~~~~~~~~~~---  260 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK----VFGATDF---VNPNDHSEPISQVLSKMTN---  260 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----HTTCCEE---ECGGGCSSCHHHHHHHHHT---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----HhCCceE---EeccccchhHHHHHHHHhC---
Confidence            5789999996 9999999988888998 7999998887765332    2354322   24432 1223333333222   


Q ss_pred             CcccEEEecCCC
Q 033396           90 GKLNILVSSAQL  101 (120)
Q Consensus        90 g~id~li~~ag~  101 (120)
                      +++|++|.++|.
T Consensus       261 ~g~D~vid~~g~  272 (374)
T 1cdo_A          261 GGVDFSLECVGN  272 (374)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            579999999986

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.56  E-value=0.00057  Score=46.47  Aligned_cols=81  Identities=14%  Similarity=0.187  Sum_probs=54.4

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCCh-------------------HHHHHHHHHHHhc--CCeEEEE
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE-------------------TELNQRIQEWKSK--GLQVSGN   67 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~~~~~--~~~~~~~   67 (120)
                      .++++.++|.|+ ||+|.++++.|+..|. ++.++|.+.                   .+.+...+.+.+.  ..++..+
T Consensus        25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  103 (251)
T 1zud_1           25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL  103 (251)
T ss_dssp             HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence            367889999998 7899999999999994 688876542                   3455555666554  3455555


Q ss_pred             eccCCCHHHHHHHHHHHHhhcCCcccEEEecCC
Q 033396           68 ACDLKIRAQREKLMETVSSQFDGKLNILVSSAQ  100 (120)
Q Consensus        68 ~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag  100 (120)
                      ..+++. +.+..++        ...|+||++..
T Consensus       104 ~~~~~~-~~~~~~~--------~~~DvVi~~~d  127 (251)
T 1zud_1          104 QQRLTG-EALKDAV--------ARADVVLDCTD  127 (251)
T ss_dssp             CSCCCH-HHHHHHH--------HHCSEEEECCS
T ss_pred             eccCCH-HHHHHHH--------hcCCEEEECCC
Confidence            544543 3344444        34688887765

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.55  E-value=0.00072  Score=48.25  Aligned_cols=76  Identities=16%  Similarity=0.209  Sum_probs=53.3

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+.+++|+|+ |++|...+..+...|++|+.+++++.+++.+. ++   |....   .|..+.+.++    ++   . ++
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~l---Ga~~v---i~~~~~~~~~----~~---~-~g  257 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-AL---GADEV---VNSRNADEMA----AH---L-KS  257 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH---TCSEE---EETTCHHHHH----TT---T-TC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCcEE---eccccHHHHH----Hh---h-cC
Confidence            5789999998 88999999888889999999998887765433 23   43322   3455543222    21   1 47


Q ss_pred             ccEEEecCCCCC
Q 033396           92 LNILVSSAQLPY  103 (120)
Q Consensus        92 id~li~~ag~~~  103 (120)
                      +|++|.++|...
T Consensus       258 ~Dvvid~~g~~~  269 (369)
T 1uuf_A          258 FDFILNTVAAPH  269 (369)
T ss_dssp             EEEEEECCSSCC
T ss_pred             CCEEEECCCCHH
Confidence            999999999753

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.55  E-value=0.0036  Score=42.98  Aligned_cols=41  Identities=20%  Similarity=0.182  Sum_probs=34.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHH
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQ   55 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~   55 (120)
                      +++.|.|+ |.+|..++..|++.|++|++.+++++.++...+
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~   45 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKK   45 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence            46777776 889999999999999999999999876655444

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.54  E-value=0.0021  Score=45.43  Aligned_cols=80  Identities=21%  Similarity=0.251  Sum_probs=52.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCC--CHHHHHHHHHHHHhhc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLK--IRAQREKLMETVSSQF   88 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~~~   88 (120)
                      .+.+++|+|+ |++|...+..+...|+ +|+.+++++.+++..    ++.|....   .|..  +.+++.   +++.+..
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~~lGa~~v---i~~~~~~~~~~~---~~i~~~~  239 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA----KEIGADLV---LQISKESPQEIA---RKVEGQL  239 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH----HHTTCSEE---EECSSCCHHHHH---HHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH----HHhCCCEE---EcCcccccchHH---HHHHHHh
Confidence            5789999996 8999999888878998 899999887665433    22354322   2333  222222   2222222


Q ss_pred             CCcccEEEecCCCC
Q 033396           89 DGKLNILVSSAQLP  102 (120)
Q Consensus        89 ~g~id~li~~ag~~  102 (120)
                      ++++|++|.++|..
T Consensus       240 ~~g~D~vid~~g~~  253 (356)
T 1pl8_A          240 GCKPEVTIECTGAE  253 (356)
T ss_dssp             TSCCSEEEECSCCH
T ss_pred             CCCCCEEEECCCCh
Confidence            24699999999864

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.53  E-value=0.00061  Score=47.53  Aligned_cols=74  Identities=14%  Similarity=0.049  Sum_probs=49.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCC--EEEEeeC--ChHHHHHHHHHHHhc---CCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGA--IVHTCSR--NETELNQRIQEWKSK---GLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~--~v~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .++||||+|++|.+++..|+..+.  +++++|+  ++..++....++...   ..++.... +  +.+    .+      
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~----a~------   68 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYE----DT------   68 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGG----GG------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHH----Hh------
Confidence            589999999999999999998874  6888998  665444333333321   22333222 1  111    12      


Q ss_pred             cCCcccEEEecCCCCC
Q 033396           88 FDGKLNILVSSAQLPY  103 (120)
Q Consensus        88 ~~g~id~li~~ag~~~  103 (120)
                        ...|++|+.+|++.
T Consensus        69 --~~aDvVi~~ag~~~   82 (303)
T 1o6z_A           69 --AGSDVVVITAGIPR   82 (303)
T ss_dssp             --TTCSEEEECCCCCC
T ss_pred             --CCCCEEEEcCCCCC
Confidence              57899999999876

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.53  E-value=0.00062  Score=48.47  Aligned_cols=79  Identities=16%  Similarity=0.239  Sum_probs=52.7

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCC-HHHHHHHHHHHHhhcC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKI-RAQREKLMETVSSQFD   89 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   89 (120)
                      .+.+++|+|+ |++|...+..+...|+ +|+.+++++.+++.+ +   +.|....   .|.++ .+++.+.+.+.   .+
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~---~lGa~~v---i~~~~~~~~~~~~~~~~---~~  259 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA-K---EVGATEC---VNPQDYKKPIQEVLTEM---SN  259 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-H---HTTCSEE---ECGGGCSSCHHHHHHHH---TT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-H---HhCCceE---ecccccchhHHHHHHHH---hC
Confidence            5789999995 9999999988888998 799999888776533 2   2354322   24332 12233333332   22


Q ss_pred             CcccEEEecCCC
Q 033396           90 GKLNILVSSAQL  101 (120)
Q Consensus        90 g~id~li~~ag~  101 (120)
                      +++|++|.++|.
T Consensus       260 ~g~D~vid~~g~  271 (374)
T 2jhf_A          260 GGVDFSFEVIGR  271 (374)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCcEEEECCCC
Confidence            479999999986

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=97.52  E-value=0.00054  Score=47.75  Aligned_cols=40  Identities=30%  Similarity=0.395  Sum_probs=34.6

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR   53 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~   53 (120)
                      ++ ++|+|++|++|...+..+...|++|+.+++++.+.+.+
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~  187 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYL  187 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            45 99999999999999998888999999999887766443

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.50  E-value=0.00072  Score=48.11  Aligned_cols=79  Identities=18%  Similarity=0.232  Sum_probs=52.3

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCC-HHHHHHHHHHHHhhcC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKI-RAQREKLMETVSSQFD   89 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   89 (120)
                      .+.+++|+|+ |++|...+..+...|+ +|+.+++++.+++.+ +++   |....   .|.++ .+++.+.+.+.   .+
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~-~~l---Ga~~v---i~~~~~~~~~~~~v~~~---~~  258 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARA-KEF---GATEC---INPQDFSKPIQEVLIEM---TD  258 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHH---TCSEE---ECGGGCSSCHHHHHHHH---TT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc---CCceE---eccccccccHHHHHHHH---hC
Confidence            5789999996 8999999888888898 799999887776533 233   44322   23332 12233333332   22


Q ss_pred             CcccEEEecCCC
Q 033396           90 GKLNILVSSAQL  101 (120)
Q Consensus        90 g~id~li~~ag~  101 (120)
                      +++|++|.++|.
T Consensus       259 ~g~D~vid~~g~  270 (373)
T 2fzw_A          259 GGVDYSFECIGN  270 (373)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCc
Confidence            579999999986

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.49  E-value=0.00083  Score=47.86  Aligned_cols=79  Identities=14%  Similarity=0.173  Sum_probs=52.4

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCC-HHHHHHHHHHHHhhcC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKI-RAQREKLMETVSSQFD   89 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   89 (120)
                      .+.+++|+|+ |++|...+..+...|+ +|+.+++++.+++.+ .   +.|....   .|.++ .+++.+.+.+..   +
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~---~lGa~~v---i~~~~~~~~~~~~v~~~~---~  263 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-K---ALGATDC---LNPRELDKPVQDVITELT---A  263 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-H---HTTCSEE---ECGGGCSSCHHHHHHHHH---T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-H---HhCCcEE---EccccccchHHHHHHHHh---C
Confidence            5789999996 8999999888888998 799999888776433 2   2354322   23332 112333333322   2


Q ss_pred             CcccEEEecCCC
Q 033396           90 GKLNILVSSAQL  101 (120)
Q Consensus        90 g~id~li~~ag~  101 (120)
                      +++|++|.++|.
T Consensus       264 ~g~Dvvid~~G~  275 (376)
T 1e3i_A          264 GGVDYSLDCAGT  275 (376)
T ss_dssp             SCBSEEEESSCC
T ss_pred             CCccEEEECCCC
Confidence            579999999986

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.48  E-value=0.00034  Score=49.66  Aligned_cols=74  Identities=19%  Similarity=0.125  Sum_probs=51.6

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCH-HHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR-AQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~g   90 (120)
                      .+.+++|+|+ |++|...+..+...|++|+.+++++.+++.+. ++   |....   .|..+. +.    .+++.    +
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~v---~~~~~~~~~----~~~~~----~  242 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KM---GADHY---IATLEEGDW----GEKYF----D  242 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HH---TCSEE---EEGGGTSCH----HHHSC----S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-Hc---CCCEE---EcCcCchHH----HHHhh----c
Confidence            5789999999 99999999888889999999998877654332 23   44322   233332 21    12211    4


Q ss_pred             cccEEEecCCC
Q 033396           91 KLNILVSSAQL  101 (120)
Q Consensus        91 ~id~li~~ag~  101 (120)
                      ++|++|.++|.
T Consensus       243 ~~D~vid~~g~  253 (360)
T 1piw_A          243 TFDLIVVCASS  253 (360)
T ss_dssp             CEEEEEECCSC
T ss_pred             CCCEEEECCCC
Confidence            79999999987

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=97.48  E-value=0.00021  Score=50.64  Aligned_cols=36  Identities=25%  Similarity=0.405  Sum_probs=30.2

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      .+.+++|+|++|++|...+......|++++.+.+..
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~  202 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDR  202 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCc
Confidence            578999999999999998887777899887776543

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=97.47  E-value=0.00079  Score=48.54  Aligned_cols=79  Identities=24%  Similarity=0.256  Sum_probs=53.0

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC-
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD-   89 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-   89 (120)
                      .+.+++|+|+ |++|...+..+...|+ +|+.+++++.+++.+ +++   |....   .|..+.+..    +++.+..+ 
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~l---Ga~~v---i~~~~~~~~----~~i~~~t~g  280 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KEL---GADHV---IDPTKENFV----EAVLDYTNG  280 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH---TCSEE---ECTTTSCHH----HHHHHHTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc---CCCEE---EcCCCCCHH----HHHHHHhCC
Confidence            5789999998 8999998888888998 899999887665433 333   54322   244433322    22222222 


Q ss_pred             CcccEEEecCCCC
Q 033396           90 GKLNILVSSAQLP  102 (120)
Q Consensus        90 g~id~li~~ag~~  102 (120)
                      .++|++|.++|..
T Consensus       281 ~g~D~vid~~g~~  293 (404)
T 3ip1_A          281 LGAKLFLEATGVP  293 (404)
T ss_dssp             CCCSEEEECSSCH
T ss_pred             CCCCEEEECCCCc
Confidence            3699999999875

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.47  E-value=0.00096  Score=48.38  Aligned_cols=42  Identities=21%  Similarity=0.272  Sum_probs=37.2

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR   53 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~   53 (120)
                      +.+++++|+|+ |.+|...++.+...|++|+++++++..++..
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            67899999997 8999999999999999999999998776544

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=97.47  E-value=0.00041  Score=48.45  Aligned_cols=75  Identities=12%  Similarity=0.129  Sum_probs=49.9

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+.+++|+||+|++|...+..+...|++|+.+.+. .+. +..++   .|....   .|..+.+.+.+       .. .+
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~-~~~-~~~~~---lGa~~~---i~~~~~~~~~~-------~~-~g  215 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK-RNH-AFLKA---LGAEQC---INYHEEDFLLA-------IS-TP  215 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH-HHH-HHHHH---HTCSEE---EETTTSCHHHH-------CC-SC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc-chH-HHHHH---cCCCEE---EeCCCcchhhh-------hc-cC
Confidence            67899999999999999999988899999888753 332 23333   354332   24444332221       12 46


Q ss_pred             ccEEEecCCCC
Q 033396           92 LNILVSSAQLP  102 (120)
Q Consensus        92 id~li~~ag~~  102 (120)
                      +|++|.++|..
T Consensus       216 ~D~v~d~~g~~  226 (321)
T 3tqh_A          216 VDAVIDLVGGD  226 (321)
T ss_dssp             EEEEEESSCHH
T ss_pred             CCEEEECCCcH
Confidence            89999888753

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.46  E-value=0.00076  Score=48.12  Aligned_cols=82  Identities=21%  Similarity=0.252  Sum_probs=53.3

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .+.+++|+|+ |++|...+......|+ +|+.+++++.+.+ ..+++   |....   .|.++.+ +.+.+.+.....++
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~a~~l---Ga~~v---i~~~~~~-~~~~i~~~~~~~~g  252 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRR-LAEEV---GATAT---VDPSAGD-VVEAIAGPVGLVPG  252 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHH-HHHHH---TCSEE---ECTTSSC-HHHHHHSTTSSSTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHHc---CCCEE---ECCCCcC-HHHHHHhhhhccCC
Confidence            5789999998 8999999888888998 8998988876654 23333   54322   2444433 22222221113335


Q ss_pred             cccEEEecCCCC
Q 033396           91 KLNILVSSAQLP  102 (120)
Q Consensus        91 ~id~li~~ag~~  102 (120)
                      ++|++|.++|..
T Consensus       253 g~Dvvid~~G~~  264 (370)
T 4ej6_A          253 GVDVVIECAGVA  264 (370)
T ss_dssp             CEEEEEECSCCH
T ss_pred             CCCEEEECCCCH
Confidence            799999999853

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.45  E-value=0.0006  Score=47.77  Aligned_cols=77  Identities=10%  Similarity=0.114  Sum_probs=48.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC--CEEEEeeC--ChHHHHHHHHHHHh----cCCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396           15 TALVTGGTKGIGYAVVEELAAFG--AIVHTCSR--NETELNQRIQEWKS----KGLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      .++||||+|++|..++..|+..+  ..++++++  ++..++.....+..    .+.++.+...+    +++.+.+     
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al-----   72 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRII-----   72 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGG-----
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHh-----
Confidence            58999999999999999999887  36888998  65434332222221    12222222211    1112223     


Q ss_pred             hcCCcccEEEecCCCCC
Q 033396           87 QFDGKLNILVSSAQLPY  103 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~  103 (120)
                         ...|++|+.||++.
T Consensus        73 ---~gaD~Vi~~Ag~~~   86 (313)
T 1hye_A           73 ---DESDVVIITSGVPR   86 (313)
T ss_dssp             ---TTCSEEEECCSCCC
T ss_pred             ---CCCCEEEECCCCCC
Confidence               57999999999876

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.45  E-value=0.00043  Score=49.54  Aligned_cols=81  Identities=12%  Similarity=0.118  Sum_probs=53.5

Q ss_pred             cCcEEEEec-CCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTG-GTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litG-a~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .+.+++|.| |+|++|...+..+...|++|+.+++++.+++.+.    +.|....   .|..+.+-.++ +.+....  .
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~~---~~~~~~~~~~~-v~~~t~~--~  239 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK----AQGAVHV---CNAASPTFMQD-LTEALVS--T  239 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH----HTTCSCE---EETTSTTHHHH-HHHHHHH--H
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----hCCCcEE---EeCCChHHHHH-HHHHhcC--C
Confidence            567889986 8999999998888888999999998877654332    2354332   23444332222 2222221  2


Q ss_pred             cccEEEecCCCC
Q 033396           91 KLNILVSSAQLP  102 (120)
Q Consensus        91 ~id~li~~ag~~  102 (120)
                      ++|++|.++|..
T Consensus       240 g~d~v~d~~g~~  251 (379)
T 3iup_A          240 GATIAFDATGGG  251 (379)
T ss_dssp             CCCEEEESCEEE
T ss_pred             CceEEEECCCch
Confidence            699999999864

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.44  E-value=0.00029  Score=50.20  Aligned_cols=81  Identities=16%  Similarity=0.196  Sum_probs=52.9

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +.++.+.|+|++|.+|..++..++..|  .+|+++|.++..++....++......    ..++.-..+....+       
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~----~~~i~~t~d~~~al-------   74 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFE----GLNLTFTSDIKEAL-------   74 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCT----TCCCEEESCHHHHH-------
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCC----CCceEEcCCHHHHh-------
Confidence            456789999999999999999999988  47999999887666554444432100    01111111222333       


Q ss_pred             CCcccEEEecCCCCC
Q 033396           89 DGKLNILVSSAQLPY  103 (120)
Q Consensus        89 ~g~id~li~~ag~~~  103 (120)
                       ...|++|.++|.+.
T Consensus        75 -~dADvVvitaG~p~   88 (343)
T 3fi9_A           75 -TDAKYIVSSGGAPR   88 (343)
T ss_dssp             -TTEEEEEECCC---
T ss_pred             -CCCCEEEEccCCCC
Confidence             57899999999865

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=97.43  E-value=0.00089  Score=47.62  Aligned_cols=60  Identities=17%  Similarity=0.245  Sum_probs=43.4

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCCh-------------------HHHHHHHHHHHhcC--CeEEEEe
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNE-------------------TELNQRIQEWKSKG--LQVSGNA   68 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~-------------------~~~~~~~~~~~~~~--~~~~~~~   68 (120)
                      ++++.++|.|+ ||+|.++++.|+..| .++.++|++.                   .+.+...+.+.+..  .++..+.
T Consensus        32 L~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~~  110 (340)
T 3rui_A           32 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVK  110 (340)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEEC
T ss_pred             HhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEEe
Confidence            67889999998 899999999999999 5688887642                   34555556666543  4555555


Q ss_pred             ccC
Q 033396           69 CDL   71 (120)
Q Consensus        69 ~D~   71 (120)
                      .++
T Consensus       111 ~~i  113 (340)
T 3rui_A          111 LSI  113 (340)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            443

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.43  E-value=0.00075  Score=47.54  Aligned_cols=78  Identities=17%  Similarity=0.198  Sum_probs=52.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHC--CCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAF--GAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+.+++|+|+ |++|...+..+...  |++|+.+++++.+.+.+ +++   |....   .|..+.   ...++++..  +
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~-~~l---Ga~~v---i~~~~~---~~~~~~~~~--g  236 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFA-LEL---GADYV---SEMKDA---ESLINKLTD--G  236 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHH-HHH---TCSEE---ECHHHH---HHHHHHHHT--T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHH-HHh---CCCEE---eccccc---hHHHHHhhc--C
Confidence            6889999999 89999998887778  99999999887765433 223   43322   233220   122333332  1


Q ss_pred             CcccEEEecCCCC
Q 033396           90 GKLNILVSSAQLP  102 (120)
Q Consensus        90 g~id~li~~ag~~  102 (120)
                      .++|++|.++|..
T Consensus       237 ~g~D~vid~~g~~  249 (344)
T 2h6e_A          237 LGASIAIDLVGTE  249 (344)
T ss_dssp             CCEEEEEESSCCH
T ss_pred             CCccEEEECCCCh
Confidence            3799999999875

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=97.42  E-value=0.00059  Score=50.04  Aligned_cols=81  Identities=22%  Similarity=0.318  Sum_probs=55.2

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++++|.++|.|. |+.|.+.|+.|.++|++|...|..........+.++..|..+.  ...-  ++   .+++      
T Consensus         5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~--~g~~--~~---~~~~------   70 (451)
T 3lk7_A            5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVV--CGSH--PL---ELLD------   70 (451)
T ss_dssp             CTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEE--ESCC--CG---GGGG------
T ss_pred             hhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEE--ECCC--hH---Hhhc------
Confidence            4578999999998 7789999999999999999999865322223345555565443  2211  11   1110      


Q ss_pred             CCcccEEEecCCCCCc
Q 033396           89 DGKLNILVSSAQLPYS  104 (120)
Q Consensus        89 ~g~id~li~~ag~~~~  104 (120)
                       +..|.||.+.|+...
T Consensus        71 -~~~d~vv~spgi~~~   85 (451)
T 3lk7_A           71 -EDFCYMIKNPGIPYN   85 (451)
T ss_dssp             -SCEEEEEECTTSCTT
T ss_pred             -CCCCEEEECCcCCCC
Confidence             238999999999774

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=97.41  E-value=0.00061  Score=48.63  Aligned_cols=80  Identities=16%  Similarity=0.146  Sum_probs=53.3

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCC-HHHHHHHHHHHHhhcC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKI-RAQREKLMETVSSQFD   89 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   89 (120)
                      .+.+++|+|+ |++|...+..+...|+ +|+.+++++.+++.+    ++.|....   .|..+ .+++.+.+.+   ..+
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a----~~lGa~~v---i~~~~~~~~~~~~i~~---~~~  261 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA----KKFGVNEF---VNPKDHDKPIQEVIVD---LTD  261 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH----HTTTCCEE---ECGGGCSSCHHHHHHH---HTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHcCCcEE---EccccCchhHHHHHHH---hcC
Confidence            5778999998 9999999888888898 799999888776522    23454332   23331 1223333332   223


Q ss_pred             CcccEEEecCCCC
Q 033396           90 GKLNILVSSAQLP  102 (120)
Q Consensus        90 g~id~li~~ag~~  102 (120)
                      +++|++|.++|..
T Consensus       262 gg~D~vid~~g~~  274 (378)
T 3uko_A          262 GGVDYSFECIGNV  274 (378)
T ss_dssp             SCBSEEEECSCCH
T ss_pred             CCCCEEEECCCCH
Confidence            5799999999873

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.38  E-value=0.00058  Score=44.70  Aligned_cols=41  Identities=24%  Similarity=0.374  Sum_probs=35.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHH
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQ   55 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~   55 (120)
                      ++.|+|++|.+|.++++.|++.|++|++++|+++..+...+
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~   42 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAA   42 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            47889999999999999999999999999998776554443

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.37  E-value=0.0016  Score=45.13  Aligned_cols=42  Identities=26%  Similarity=0.428  Sum_probs=37.3

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN   51 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~   51 (120)
                      .++.++++.|.|+ |.+|+++++.+...|++|+.++|+....+
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~  194 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLA  194 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            3578999999997 89999999999999999999999876544

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.36  E-value=0.00061  Score=49.61  Aligned_cols=74  Identities=14%  Similarity=0.076  Sum_probs=55.0

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      ..++|.|. |-+|+.+++.|.+.|..|+++++++...+...    ..+  +.++.+|.++++.+.++      .. ...|
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~----~~g--~~vi~GDat~~~~L~~a------gi-~~A~   70 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR----KFG--MKVFYGDATRMDLLESA------GA-AKAE   70 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH----HTT--CCCEESCTTCHHHHHHT------TT-TTCS
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----hCC--CeEEEcCCCCHHHHHhc------CC-CccC
Confidence            34888887 78999999999999999999999987765443    234  34667899998865544      11 4677


Q ss_pred             EEEecCCC
Q 033396           94 ILVSSAQL  101 (120)
Q Consensus        94 ~li~~ag~  101 (120)
                      ++|.+.+-
T Consensus        71 ~viv~~~~   78 (413)
T 3l9w_A           71 VLINAIDD   78 (413)
T ss_dssp             EEEECCSS
T ss_pred             EEEECCCC
Confidence            77777653

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.36  E-value=0.00032  Score=49.40  Aligned_cols=77  Identities=17%  Similarity=0.171  Sum_probs=52.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .+.+++|+|+ |++|...+..+...|+ +|+.+++++.+++..    ++. .. ..  .|..+++ +.+.+.+..   ++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~----~~l-a~-~v--~~~~~~~-~~~~~~~~~---~~  230 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFA----RPY-AD-RL--VNPLEED-LLEVVRRVT---GS  230 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGG----TTT-CS-EE--ECTTTSC-HHHHHHHHH---SS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH----HHh-HH-hc--cCcCccC-HHHHHHHhc---CC
Confidence            6889999999 9999999998888998 899999987664322    112 11 11  3444422 333333332   25


Q ss_pred             cccEEEecCCC
Q 033396           91 KLNILVSSAQL  101 (120)
Q Consensus        91 ~id~li~~ag~  101 (120)
                      ++|++|.++|.
T Consensus       231 g~D~vid~~g~  241 (343)
T 2dq4_A          231 GVEVLLEFSGN  241 (343)
T ss_dssp             CEEEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999986

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=97.35  E-value=0.0015  Score=46.37  Aligned_cols=79  Identities=18%  Similarity=0.263  Sum_probs=51.4

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .+.+++|+|+ |++|...+..+...|+ +|+.+++++.+++.+ +++   |....   .|..+.+ +   .+++.+..++
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~~v---i~~~~~~-~---~~~~~~~~~g  257 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL---GATHV---INSKTQD-P---VAAIKEITDG  257 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH---TCSEE---EETTTSC-H---HHHHHHHTTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc---CCCEE---ecCCccC-H---HHHHHHhcCC
Confidence            5789999995 8999998887777898 699999887765433 233   44322   2333322 1   2222222224


Q ss_pred             cccEEEecCCCC
Q 033396           91 KLNILVSSAQLP  102 (120)
Q Consensus        91 ~id~li~~ag~~  102 (120)
                      ++|++|.++|..
T Consensus       258 g~D~vid~~g~~  269 (371)
T 1f8f_A          258 GVNFALESTGSP  269 (371)
T ss_dssp             CEEEEEECSCCH
T ss_pred             CCcEEEECCCCH
Confidence            799999999863

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=97.34  E-value=0.0011  Score=47.11  Aligned_cols=79  Identities=18%  Similarity=0.185  Sum_probs=51.7

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCH-HHHHHHHHHHHhhcC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR-AQREKLMETVSSQFD   89 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   89 (120)
                      .+.+++|+|+ |++|...+......|+ +|+.+++++.+++.+ +   +.|....   .|..+. +++.+.+.+.   .+
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~---~lGa~~v---i~~~~~~~~~~~~i~~~---t~  259 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA-I---ELGATEC---LNPKDYDKPIYEVICEK---TN  259 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-H---HTTCSEE---ECGGGCSSCHHHHHHHH---TT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-H---HcCCcEE---EecccccchHHHHHHHH---hC
Confidence            5789999996 8999998887777898 799999887766433 2   2354322   233321 1233233322   22


Q ss_pred             CcccEEEecCCC
Q 033396           90 GKLNILVSSAQL  101 (120)
Q Consensus        90 g~id~li~~ag~  101 (120)
                      +++|++|.++|.
T Consensus       260 gg~Dvvid~~g~  271 (373)
T 1p0f_A          260 GGVDYAVECAGR  271 (373)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            579999999986

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.32  E-value=0.0013  Score=46.06  Aligned_cols=75  Identities=16%  Similarity=0.113  Sum_probs=50.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhcCC--eEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           15 TALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKSKGL--QVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .+.|+|++|++|..++..|+..+  ..|+++|+++  .+....++.....  ++....    ...+.+.++        .
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~----~t~d~~~a~--------~   67 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL----GPEQLPDCL--------K   67 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE----SGGGHHHHH--------T
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec----CCCCHHHHh--------C
Confidence            47899999999999999999988  6899999987  2333334433221  222210    012233344        5


Q ss_pred             cccEEEecCCCCC
Q 033396           91 KLNILVSSAQLPY  103 (120)
Q Consensus        91 ~id~li~~ag~~~  103 (120)
                      ..|++|+++|.+.
T Consensus        68 ~aDvVvi~ag~~~   80 (314)
T 1mld_A           68 GCDVVVIPAGVPR   80 (314)
T ss_dssp             TCSEEEECCSCCC
T ss_pred             CCCEEEECCCcCC
Confidence            7899999999876

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.29  E-value=0.0007  Score=49.93  Aligned_cols=74  Identities=11%  Similarity=0.144  Sum_probs=55.6

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      ..++|.|+ |-+|..+|+.|.+.|+.|++.+.+++.++.+.+.+     .+..+.+|.++++.++++=      . ...|
T Consensus         4 M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-----~~~~i~Gd~~~~~~L~~Ag------i-~~ad   70 (461)
T 4g65_A            4 MKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-----DLRVVNGHASHPDVLHEAG------A-QDAD   70 (461)
T ss_dssp             EEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-----SCEEEESCTTCHHHHHHHT------T-TTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-----CcEEEEEcCCCHHHHHhcC------C-CcCC
Confidence            35888887 78999999999999999999999988876665543     3567889999988665541      1 3456


Q ss_pred             EEEecCC
Q 033396           94 ILVSSAQ  100 (120)
Q Consensus        94 ~li~~ag  100 (120)
                      .+|...+
T Consensus        71 ~~ia~t~   77 (461)
T 4g65_A           71 MLVAVTN   77 (461)
T ss_dssp             EEEECCS
T ss_pred             EEEEEcC
Confidence            6665443

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=97.28  E-value=0.00062  Score=48.02  Aligned_cols=70  Identities=27%  Similarity=0.285  Sum_probs=50.4

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+.+++|+|+ |++|...+..+...|++|+.+++++.+.+.+    ++.|....+     ++++.+.           .+
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~~lGa~~v~-----~~~~~~~-----------~~  234 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA----LSMGVKHFY-----TDPKQCK-----------EE  234 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH----HHTTCSEEE-----SSGGGCC-----------SC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH----HhcCCCeec-----CCHHHHh-----------cC
Confidence            5789999997 8999999888888999999999887766533    234544333     2332211           26


Q ss_pred             ccEEEecCCCC
Q 033396           92 LNILVSSAQLP  102 (120)
Q Consensus        92 id~li~~ag~~  102 (120)
                      +|++|.++|..
T Consensus       235 ~D~vid~~g~~  245 (348)
T 3two_A          235 LDFIISTIPTH  245 (348)
T ss_dssp             EEEEEECCCSC
T ss_pred             CCEEEECCCcH
Confidence            89999998876

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=97.27  E-value=0.0021  Score=46.14  Aligned_cols=80  Identities=19%  Similarity=0.326  Sum_probs=52.3

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .+.+++|.|+ |++|...+......|+ +|+.+++++.+++.+ +   +.|..  .  .|.++.+.+.+.+.+...  +.
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a-~---~lGa~--~--i~~~~~~~~~~~v~~~t~--g~  253 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-K---AQGFE--I--ADLSLDTPLHEQIAALLG--EP  253 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-H---HTTCE--E--EETTSSSCHHHHHHHHHS--SS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH-H---HcCCc--E--EccCCcchHHHHHHHHhC--CC
Confidence            5789999995 9999998887777898 688899887765433 2   33553  2  344432222222222211  13


Q ss_pred             cccEEEecCCCC
Q 033396           91 KLNILVSSAQLP  102 (120)
Q Consensus        91 ~id~li~~ag~~  102 (120)
                      ++|++|.++|..
T Consensus       254 g~Dvvid~~G~~  265 (398)
T 1kol_A          254 EVDCAVDAVGFE  265 (398)
T ss_dssp             CEEEEEECCCTT
T ss_pred             CCCEEEECCCCc
Confidence            699999999965

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=97.27  E-value=0.0011  Score=46.75  Aligned_cols=80  Identities=18%  Similarity=0.118  Sum_probs=52.3

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC-
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD-   89 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-   89 (120)
                      .+.+++|+|+ |++|...+......|+ +|+.+++++.+++.. .++   |....   .|.++.+..    +++.+..+ 
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~l---Ga~~v---i~~~~~~~~----~~v~~~t~g  233 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LEY---GATDI---INYKNGDIV----EQILKATDG  233 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HHH---TCCEE---ECGGGSCHH----HHHHHHTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHh---CCceE---EcCCCcCHH----HHHHHHcCC
Confidence            5778999985 8999998888878898 799999887665422 333   54322   233333322    22223222 


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                      .++|++|.++|...
T Consensus       234 ~g~D~v~d~~g~~~  247 (352)
T 3fpc_A          234 KGVDKVVIAGGDVH  247 (352)
T ss_dssp             CCEEEEEECSSCTT
T ss_pred             CCCCEEEECCCChH
Confidence            36999999999854

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=97.24  E-value=0.00015  Score=49.50  Aligned_cols=42  Identities=21%  Similarity=0.294  Sum_probs=35.4

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQR   53 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~   53 (120)
                      .+++ .++|.|+ |+.|++++..|++.|+ +|++++|+.++.+++
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~l  148 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKAL  148 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTC
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            3567 7889987 8999999999999997 899999998765543

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=97.20  E-value=0.0012  Score=46.82  Aligned_cols=76  Identities=13%  Similarity=0.206  Sum_probs=50.8

Q ss_pred             cCcEEEEecCCCchHHHH-HHHH-HHCCCE-EEEeeCChH---HHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHH
Q 033396           12 KGMTALVTGGTKGIGYAV-VEEL-AAFGAI-VHTCSRNET---ELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~-a~~l-~~~g~~-v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      ++.+++|+|+ |++|... +..+ ...|++ |+.+++++.   +++.+ .   +.|...  +  |..+.+ +.+ +.+. 
T Consensus       172 ~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~---~lGa~~--v--~~~~~~-~~~-i~~~-  239 (357)
T 2b5w_A          172 DPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-E---ELDATY--V--DSRQTP-VED-VPDV-  239 (357)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-H---HTTCEE--E--ETTTSC-GGG-HHHH-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-H---HcCCcc--c--CCCccC-HHH-HHHh-
Confidence            3489999999 9999998 7766 568887 999998776   54432 2   335432  2  444322 222 3333 


Q ss_pred             hhcCCcccEEEecCCCC
Q 033396           86 SQFDGKLNILVSSAQLP  102 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~  102 (120)
                        . +++|++|.++|..
T Consensus       240 --~-gg~Dvvid~~g~~  253 (357)
T 2b5w_A          240 --Y-EQMDFIYEATGFP  253 (357)
T ss_dssp             --S-CCEEEEEECSCCH
T ss_pred             --C-CCCCEEEECCCCh
Confidence              2 5799999999864

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.20  E-value=0.0032  Score=43.56  Aligned_cols=41  Identities=29%  Similarity=0.437  Sum_probs=36.5

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN   51 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~   51 (120)
                      ++.++++.|.|+ |.+|+.+++.+...|++|+.++|+....+
T Consensus       152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~  192 (293)
T 3d4o_A          152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLA  192 (293)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHH
Confidence            578999999996 89999999999999999999999876543

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=97.19  E-value=0.0027  Score=44.68  Aligned_cols=80  Identities=16%  Similarity=0.173  Sum_probs=51.2

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      -.+.+++|.|+ |++|...+..+... +++|+.+++++++++..    ++.|....+   |..+ +..++ +.+....  
T Consensus       170 ~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~----~~lGa~~~i---~~~~-~~~~~-v~~~t~g--  237 (345)
T 3jv7_A          170 GPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA----REVGADAAV---KSGA-GAADA-IRELTGG--  237 (345)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH----HHTTCSEEE---ECST-THHHH-HHHHHGG--
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH----HHcCCCEEE---cCCC-cHHHH-HHHHhCC--
Confidence            35789999998 99999887766666 68999999988766433    233544322   2222 22222 2222211  


Q ss_pred             CcccEEEecCCCC
Q 033396           90 GKLNILVSSAQLP  102 (120)
Q Consensus        90 g~id~li~~ag~~  102 (120)
                      .++|++|.++|..
T Consensus       238 ~g~d~v~d~~G~~  250 (345)
T 3jv7_A          238 QGATAVFDFVGAQ  250 (345)
T ss_dssp             GCEEEEEESSCCH
T ss_pred             CCCeEEEECCCCH
Confidence            2799999999975

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.19  E-value=0.00046  Score=48.92  Aligned_cols=79  Identities=16%  Similarity=0.224  Sum_probs=50.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCC--E-----EEEeeCCh--HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHH
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGA--I-----VHTCSRNE--TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETV   84 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~--~-----v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (120)
                      ..+.||||+|.+|..++..|+..+.  +     ++++|.++  ..++....++........   .++.......+.+   
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~---~~~~~~~~~~~~~---   77 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL---KDVIATDKEEIAF---   77 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE---EEEEEESCHHHHT---
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc---CCEEEcCCcHHHh---
Confidence            4689999999999999999998773  4     89999864  344444445543221111   1111111122233   


Q ss_pred             HhhcCCcccEEEecCCCCC
Q 033396           85 SSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        85 ~~~~~g~id~li~~ag~~~  103 (120)
                           ...|++|+.||.+.
T Consensus        78 -----~daDvVvitAg~pr   91 (333)
T 5mdh_A           78 -----KDLDVAILVGSMPR   91 (333)
T ss_dssp             -----TTCSEEEECCSCCC
T ss_pred             -----CCCCEEEEeCCCCC
Confidence                 57899999999875

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.18  E-value=0.0043  Score=43.83  Aligned_cols=78  Identities=9%  Similarity=0.068  Sum_probs=53.8

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhcC---CeEEEEeccCCCHHHHHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKG---LQVSGNACDLKIRAQREKLMETV   84 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~   84 (120)
                      ...++.+.|+|+ |.+|.+++..|+..+.  +++++|++++.++....++....   ..+.....|              
T Consensus         6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~--------------   70 (326)
T 3vku_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE--------------   70 (326)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC--------------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc--------------
Confidence            345678999996 9999999999999885  89999998877665555554321   122222211              


Q ss_pred             HhhcCCcccEEEecCCCCC
Q 033396           85 SSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        85 ~~~~~g~id~li~~ag~~~  103 (120)
                      .+.+ ...|++|+++|.+.
T Consensus        71 ~~a~-~~aDiVvi~ag~~~   88 (326)
T 3vku_A           71 YSDA-KDADLVVITAGAPQ   88 (326)
T ss_dssp             GGGG-TTCSEEEECCCCC-
T ss_pred             HHHh-cCCCEEEECCCCCC
Confidence            1223 57899999999875

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=97.18  E-value=0.0038  Score=47.59  Aligned_cols=91  Identities=13%  Similarity=0.168  Sum_probs=56.7

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCCh-------------------HHHHHHHHHHHhcC--CeEEEEe
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNE-------------------TELNQRIQEWKSKG--LQVSGNA   68 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~-------------------~~~~~~~~~~~~~~--~~~~~~~   68 (120)
                      ++++.++|.|+ ||+|.++++.|+..| -++.++|.+.                   .+.+.+.+.+.+..  ..+..+.
T Consensus       324 L~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~~  402 (615)
T 4gsl_A          324 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVK  402 (615)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEEC
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEee
Confidence            67889999998 899999999999999 5788888753                   34555666666543  4555555


Q ss_pred             ccC-------CCHHHHHHHHHHHHhhcCCcccEEEecCCCCC
Q 033396           69 CDL-------KIRAQREKLMETVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        69 ~D~-------~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~  103 (120)
                      .++       ++++...--.+...+.+ .+.|+||.+.--..
T Consensus       403 ~~Ipm~gh~v~~e~~~~l~~~~l~~ll-~~~DlVvd~tDn~~  443 (615)
T 4gsl_A          403 LSIPMIGHKLVNEEAQHKDFDRLRALI-KEHDIIFLLVDSRE  443 (615)
T ss_dssp             CCCCCTTCCCSCHHHHHHHHHHHHHHH-HHCSEEEECCSSGG
T ss_pred             ccccccCccccchhhhcCCHHHHHHHh-hcCCEEEecCCCHH
Confidence            444       22211000011112222 45788888875543

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.18  E-value=0.0012  Score=45.84  Aligned_cols=46  Identities=22%  Similarity=0.182  Sum_probs=39.4

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQ   55 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~   55 (120)
                      .+++++.++|.|+ ||.|++++..|.+.|+ +|.++.|+.++.+++.+
T Consensus       118 ~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~  164 (282)
T 3fbt_A          118 VEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG  164 (282)
T ss_dssp             CCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT
T ss_pred             CCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            3468999999998 6999999999999997 89999999887665544

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=97.16  E-value=0.0017  Score=46.35  Aligned_cols=83  Identities=23%  Similarity=0.251  Sum_probs=55.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCCh-------------------HHHHHHHHHHHhc--CCeEEEE
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNE-------------------TELNQRIQEWKSK--GLQVSGN   67 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~-------------------~~~~~~~~~~~~~--~~~~~~~   67 (120)
                      .++++.++|.|+ ||+|.++++.|+..| .++.++|++.                   .+.+...+.+.+.  ..++..+
T Consensus       115 ~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  193 (353)
T 3h5n_A          115 KLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEI  193 (353)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEe
Confidence            467889999998 899999999999999 5788888752                   2344455555543  3556666


Q ss_pred             eccCCCHHHHHHHHHHHHhhcCCcccEEEecCCCC
Q 033396           68 ACDLKIRAQREKLMETVSSQFDGKLNILVSSAQLP  102 (120)
Q Consensus        68 ~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  102 (120)
                      ..+++....+.       + + .+.|+||.+..-.
T Consensus       194 ~~~i~~~~~~~-------~-~-~~~DlVvd~~Dn~  219 (353)
T 3h5n_A          194 ALNINDYTDLH-------K-V-PEADIWVVSADHP  219 (353)
T ss_dssp             ECCCCSGGGGG-------G-S-CCCSEEEECCCCS
T ss_pred             ecccCchhhhh-------H-h-ccCCEEEEecCCh
Confidence            66665543221       1 3 5677777766443

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.16  E-value=0.0066  Score=42.88  Aligned_cols=76  Identities=11%  Similarity=0.019  Sum_probs=53.0

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhc----CCeEEEEeccCCCHHHHHHHHHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSK----GLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      +.+.+.|+|+ |.+|.+++..|+..|.  +|+++|++++.++....++...    +..+.....|.              
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~--------------   68 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTY--------------   68 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECG--------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcH--------------
Confidence            3557889996 9999999999999885  8999999887766554444432    12333322221              


Q ss_pred             hhcCCcccEEEecCCCCC
Q 033396           86 SQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~  103 (120)
                      +.+ ...|++|.++|.+.
T Consensus        69 ~a~-~~aDvVvi~ag~p~   85 (326)
T 3pqe_A           69 EDC-KDADIVCICAGANQ   85 (326)
T ss_dssp             GGG-TTCSEEEECCSCCC
T ss_pred             HHh-CCCCEEEEecccCC
Confidence            122 57899999999865

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.14  E-value=0.0011  Score=45.68  Aligned_cols=43  Identities=26%  Similarity=0.215  Sum_probs=38.5

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW   57 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~   57 (120)
                      +|.++|.|+ ||.|++++..|++.|.+|.+++|+.++.+++. ++
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~  160 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL  160 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC
Confidence            889999997 99999999999999999999999988877666 44

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=97.14  E-value=0.0028  Score=45.56  Aligned_cols=80  Identities=16%  Similarity=0.255  Sum_probs=52.2

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .+.+++|.|+ |++|...+..+...|+ +|+.+++++.+++.+    ++.|..  .  .|..+.+.+.+.+.+....  .
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~~lGa~--~--i~~~~~~~~~~~~~~~~~g--~  253 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLL----SDAGFE--T--IDLRNSAPLRDQIDQILGK--P  253 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH----HTTTCE--E--EETTSSSCHHHHHHHHHSS--S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH----HHcCCc--E--EcCCCcchHHHHHHHHhCC--C
Confidence            5789999997 9999998887777898 899999988765432    234543  2  2444322112222222111  2


Q ss_pred             cccEEEecCCCC
Q 033396           91 KLNILVSSAQLP  102 (120)
Q Consensus        91 ~id~li~~ag~~  102 (120)
                      ++|++|.++|..
T Consensus       254 g~Dvvid~~g~~  265 (398)
T 2dph_A          254 EVDCGVDAVGFE  265 (398)
T ss_dssp             CEEEEEECSCTT
T ss_pred             CCCEEEECCCCc
Confidence            699999999964

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.12  E-value=0.0053  Score=44.28  Aligned_cols=85  Identities=20%  Similarity=0.215  Sum_probs=56.3

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccC-----------CCHHHHHH
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDL-----------KIRAQREK   79 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----------~~~~~~~~   79 (120)
                      +.+++++|.|+ |.+|...++.+...|++|+++++++..++...+    .|.+.  +..|+           -..+....
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~----lGa~~--~~l~~~~~~~~gya~~~~~~~~~~  254 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS----VGAQW--LDLGIDAAGEGGYARELSEAERAQ  254 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH----TTCEE--CCCC-------------CHHHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCeE--EeccccccccccchhhhhHHHHhh
Confidence            57889999999 799999999999999999999999877655433    24332  12111           00111222


Q ss_pred             HHHHHHhhcCCcccEEEecCCCCC
Q 033396           80 LMETVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        80 ~~~~~~~~~~g~id~li~~ag~~~  103 (120)
                      -.+.+.+.. ...|++|.++.++.
T Consensus       255 ~~~~l~e~l-~~aDIVI~tv~iPg  277 (381)
T 3p2y_A          255 QQQALEDAI-TKFDIVITTALVPG  277 (381)
T ss_dssp             HHHHHHHHH-TTCSEEEECCCCTT
T ss_pred             hHHHHHHHH-hcCCEEEECCCCCC
Confidence            233344444 67899999876654

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=97.11  E-value=0.0023  Score=48.63  Aligned_cols=61  Identities=16%  Similarity=0.243  Sum_probs=44.4

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCC-------------------hHHHHHHHHHHHhc--CCeEEEE
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRN-------------------ETELNQRIQEWKSK--GLQVSGN   67 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~-------------------~~~~~~~~~~~~~~--~~~~~~~   67 (120)
                      .++++.++|.|+ ||+|.++++.|+..| .++.++|.+                   ..+.+.+.+.+.+.  ..++..+
T Consensus       324 kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~  402 (598)
T 3vh1_A          324 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  402 (598)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEE
Confidence            367889999988 899999999999999 478888654                   13556666667664  3555555


Q ss_pred             eccC
Q 033396           68 ACDL   71 (120)
Q Consensus        68 ~~D~   71 (120)
                      ..++
T Consensus       403 ~~~I  406 (598)
T 3vh1_A          403 KLSI  406 (598)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            5443

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=97.10  E-value=0.0018  Score=46.42  Aligned_cols=47  Identities=23%  Similarity=0.308  Sum_probs=40.7

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW   57 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~   57 (120)
                      ++++|+++|.|. |.+|..+++.|.+.|++|++.+++...+++..+++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            588999999997 88999999999999999999999887776655543

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=97.08  E-value=0.0038  Score=44.87  Aligned_cols=43  Identities=19%  Similarity=0.203  Sum_probs=37.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR   53 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~   53 (120)
                      .+.+++++|+|+ |.+|...++.+...|++|+++++++...+..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~  211 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQV  211 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            468999999996 8999999999999999999999987665443

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=97.07  E-value=0.00036  Score=49.22  Aligned_cols=83  Identities=16%  Similarity=0.090  Sum_probs=55.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEE-EEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVS-GNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ++.++.++|.|++.-+|+.+++.|+..|++|.+++|+.....+...++   +...+ ......++++++.+.+       
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~l---a~~~~~~t~~~~t~~~~L~e~l-------  243 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESL---KLNKHHVEDLGEYSEDLLKKCS-------  243 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCS---SCCCCEEEEEEECCHHHHHHHH-------
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHH---hhhcccccccccccHhHHHHHh-------
Confidence            578999999999888999999999999999999988743221111111   11111 1111114445666666       


Q ss_pred             CCcccEEEecCCCCC
Q 033396           89 DGKLNILVSSAQLPY  103 (120)
Q Consensus        89 ~g~id~li~~ag~~~  103 (120)
                       ..-|+||.++|...
T Consensus       244 -~~ADIVIsAtg~p~  257 (320)
T 1edz_A          244 -LDSDVVITGVPSEN  257 (320)
T ss_dssp             -HHCSEEEECCCCTT
T ss_pred             -ccCCEEEECCCCCc
Confidence             35799999998865

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.03  E-value=0.0055  Score=41.99  Aligned_cols=82  Identities=11%  Similarity=0.014  Sum_probs=52.6

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHH------HHh--cCCeEEEEeccCCCHHHHHHHHHHHH
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE------WKS--KGLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~------~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      +++.|.|++|.+|.++++.|++.|++|++++|+++..+...+.      ..+  ...++.++.   ..+..+..+++++.
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~aDvVi~a---v~~~~~~~v~~~l~   88 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLTDGDGWIDEADVVVLA---LPDNIIEKVAEDIV   88 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCCCSSGGGGTCSEEEEC---SCHHHHHHHHHHHG
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcCCHHHHhcCCCEEEEc---CCchHHHHHHHHHH
Confidence            3688999999999999999999999999999988766544320      000  123333322   22344677777776


Q ss_pred             hhcCCcccEEEecC
Q 033396           86 SQFDGKLNILVSSA   99 (120)
Q Consensus        86 ~~~~g~id~li~~a   99 (120)
                      ..+ .+=.+++++.
T Consensus        89 ~~l-~~~~ivv~~s  101 (286)
T 3c24_A           89 PRV-RPGTIVLILD  101 (286)
T ss_dssp             GGS-CTTCEEEESC
T ss_pred             HhC-CCCCEEEECC
Confidence            554 2223455443

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.00  E-value=0.0018  Score=45.52  Aligned_cols=72  Identities=8%  Similarity=0.012  Sum_probs=52.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      .+.++|.|+ |.+|..++++|.++|. |++++++++..+ ..    ..  .+.++.+|.++++.++++      .. ...
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~----~~--~~~~i~gd~~~~~~L~~a------~i-~~a  178 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VL----RS--GANFVHGDPTRVSDLEKA------NV-RGA  178 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HH----HT--TCEEEESCTTSHHHHHHT------CS-TTE
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HH----hC--CcEEEEeCCCCHHHHHhc------Ch-hhc
Confidence            457889997 8999999999999999 999999887765 32    22  356788999998876654      11 456


Q ss_pred             cEEEecCC
Q 033396           93 NILVSSAQ  100 (120)
Q Consensus        93 d~li~~ag  100 (120)
                      |.+|...+
T Consensus       179 ~~vi~~~~  186 (336)
T 1lnq_A          179 RAVIVDLE  186 (336)
T ss_dssp             EEEEECCS
T ss_pred             cEEEEcCC
Confidence            66666554

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.97  E-value=0.00071  Score=47.81  Aligned_cols=75  Identities=12%  Similarity=-0.023  Sum_probs=50.6

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHh----cC--CeEEEEeccCCCHHHHHHHHHHHH
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKS----KG--LQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      ...+.|.|+ |.+|.+++..|+..|. .|++.+++++.++.....+..    ..  .++.. .   +|   ++..+    
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t---~d---~~ea~----   76 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-E---YS---YEAAL----   76 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-E---CS---HHHHH----
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-e---CC---HHHHh----
Confidence            346888998 9999999999999997 899999988665543332221    11  22221 1   22   22233    


Q ss_pred             hhcCCcccEEEecCCCCC
Q 033396           86 SQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~  103 (120)
                          ...|++|.++|.+.
T Consensus        77 ----~~aDiVi~a~g~p~   90 (331)
T 1pzg_A           77 ----TGADCVIVTAGLTK   90 (331)
T ss_dssp             ----TTCSEEEECCSCSS
T ss_pred             ----CCCCEEEEccCCCC
Confidence                56899999998875

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.97  E-value=0.0054  Score=42.90  Aligned_cols=88  Identities=10%  Similarity=0.120  Sum_probs=56.7

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHH-------HHh--cCCeEEEEeccCCCHHHHHHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE-------WKS--KGLQVSGNACDLKIRAQREKLME   82 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~-------~~~--~~~~~~~~~~D~~~~~~~~~~~~   82 (120)
                      +.+++.|.|+ |.+|..+++.|++.|++|++++|+++..+...+.       +.+  ...++.++.  +.++..++.++.
T Consensus        30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~--vp~~~~~~~v~~  106 (320)
T 4dll_A           30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSM--LENGAVVQDVLF  106 (320)
T ss_dssp             CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEEC--CSSHHHHHHHHT
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEE--CCCHHHHHHHHc
Confidence            3457777866 9999999999999999999999998776554321       111  133443333  455556666665


Q ss_pred             --HHHhhcCCcccEEEecCCCCC
Q 033396           83 --TVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        83 --~~~~~~~g~id~li~~ag~~~  103 (120)
                        .+.... .+=.++|++.....
T Consensus       107 ~~~~~~~l-~~~~~vi~~st~~~  128 (320)
T 4dll_A          107 AQGVAAAM-KPGSLFLDMASITP  128 (320)
T ss_dssp             TTCHHHHC-CTTCEEEECSCCCH
T ss_pred             chhHHhhC-CCCCEEEecCCCCH
Confidence              454444 34456676665543

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.95  E-value=0.0013  Score=45.70  Aligned_cols=41  Identities=24%  Similarity=0.430  Sum_probs=36.2

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE   49 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~   49 (120)
                      .+++||.++|.|+++-+|+.++..|+..|++|.++.+....
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~  196 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKD  196 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSC
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchh
Confidence            35799999999999999999999999999999999875433

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.93  E-value=0.036  Score=38.19  Aligned_cols=38  Identities=26%  Similarity=0.294  Sum_probs=33.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHH
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQ   52 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~   52 (120)
                      +.+.|.|+ |.+|..++..|++.|++|++++++++.++.
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~   53 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAK   53 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH
Confidence            56888888 899999999999999999999999876554

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.91  E-value=0.0061  Score=44.31  Aligned_cols=43  Identities=16%  Similarity=0.227  Sum_probs=37.4

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHH
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRI   54 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~   54 (120)
                      +.+.+++|.|+ |.+|...++.+...|++|+++++++..++...
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~  230 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA  230 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            57889999999 79999999999999999999999987765443

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=96.91  E-value=0.0042  Score=45.16  Aligned_cols=73  Identities=12%  Similarity=0.008  Sum_probs=52.2

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +.+.+++++|.|+ |-+|+.+++.+.+.|++|++++.++......   +   .  -..+..|..|.+.+.++++      
T Consensus        31 ~~~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~---~---a--d~~~~~~~~d~~~l~~~a~------   95 (419)
T 4e4t_A           31 PILPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAGA---V---A--DRHLRAAYDDEAALAELAG------   95 (419)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHHH---H---S--SEEECCCTTCHHHHHHHHH------
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchhh---h---C--CEEEECCcCCHHHHHHHHh------
Confidence            3468899999987 5799999999999999999998765432111   1   1  1245578888888777762      


Q ss_pred             CCcccEEEec
Q 033396           89 DGKLNILVSS   98 (120)
Q Consensus        89 ~g~id~li~~   98 (120)
                        ++|+++..
T Consensus        96 --~~D~V~~~  103 (419)
T 4e4t_A           96 --LCEAVSTE  103 (419)
T ss_dssp             --HCSEEEEC
T ss_pred             --cCCEEEEc
Confidence              47877743

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.88  E-value=0.0022  Score=44.50  Aligned_cols=70  Identities=13%  Similarity=0.101  Sum_probs=45.3

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+.+++|+|+ |++|...+......|++|+.++ ++.+.+.+ +++   |... .+  |  |.+   ++        +++
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~-~~l---Ga~~-v~--~--d~~---~v--------~~g  199 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALA-AKR---GVRH-LY--R--EPS---QV--------TQK  199 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHH-HHH---TEEE-EE--S--SGG---GC--------CSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHH-HHc---CCCE-EE--c--CHH---Hh--------CCC
Confidence            6889999999 9999999888888999999998 65554333 223   4332 22  2  211   11        367


Q ss_pred             ccEEEecCCCCC
Q 033396           92 LNILVSSAQLPY  103 (120)
Q Consensus        92 id~li~~ag~~~  103 (120)
                      +|++|.++|...
T Consensus       200 ~Dvv~d~~g~~~  211 (315)
T 3goh_A          200 YFAIFDAVNSQN  211 (315)
T ss_dssp             EEEEECC-----
T ss_pred             ccEEEECCCchh
Confidence            899999888644

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.88  E-value=0.0056  Score=42.29  Aligned_cols=86  Identities=6%  Similarity=0.026  Sum_probs=57.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHH-------HHhc-CCeEEEEeccCCCHHHHHHHHHHHH
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE-------WKSK-GLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~-------~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      +++.|.|. |.+|..+++.|++.|++|++++|+++..+...+.       +.+. ..++.+  .=+.++..++.+++++.
T Consensus        16 ~~I~vIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~aDvvi--~~vp~~~~~~~v~~~l~   92 (296)
T 3qha_A           16 LKLGYIGL-GNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAAADLIH--ITVLDDAQVREVVGELA   92 (296)
T ss_dssp             CCEEEECC-STTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTTSSEEE--ECCSSHHHHHHHHHHHH
T ss_pred             CeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHhCCEEE--EECCChHHHHHHHHHHH
Confidence            45667774 8999999999999999999999988665444321       1110 133333  33555667788887777


Q ss_pred             hhcCCcccEEEecCCCCC
Q 033396           86 SQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~  103 (120)
                      ... .+=.++|++.....
T Consensus        93 ~~l-~~g~ivv~~st~~~  109 (296)
T 3qha_A           93 GHA-KPGTVIAIHSTISD  109 (296)
T ss_dssp             TTC-CTTCEEEECSCCCH
T ss_pred             Hhc-CCCCEEEEeCCCCH
Confidence            665 34457777766543

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=96.85  E-value=0.0078  Score=42.16  Aligned_cols=81  Identities=16%  Similarity=0.205  Sum_probs=50.3

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCE-EEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ..+.+++|.|+ |++|...+..+...|+. ++.+++++.+++. .   ++.|....+   |.++.+ ..+...++.+.  
T Consensus       159 ~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~-a---~~lGa~~~i---~~~~~~-~~~~~~~~~~~--  227 (346)
T 4a2c_A          159 CENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLAL-A---KSFGAMQTF---NSSEMS-APQMQSVLREL--  227 (346)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH-H---HHTTCSEEE---ETTTSC-HHHHHHHHGGG--
T ss_pred             CCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHH-H---HHcCCeEEE---eCCCCC-HHHHHHhhccc--
Confidence            36789999987 89999998888889976 5667777766532 2   233544333   333322 22233333222  


Q ss_pred             CcccEEEecCCCC
Q 033396           90 GKLNILVSSAQLP  102 (120)
Q Consensus        90 g~id~li~~ag~~  102 (120)
                      +..|+++.++|..
T Consensus       228 ~g~d~v~d~~G~~  240 (346)
T 4a2c_A          228 RFNQLILETAGVP  240 (346)
T ss_dssp             CSSEEEEECSCSH
T ss_pred             CCccccccccccc
Confidence            4678888888753

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.83  E-value=0.0029  Score=43.72  Aligned_cols=41  Identities=12%  Similarity=0.180  Sum_probs=36.1

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHH
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN   51 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~   51 (120)
                      ++||.++|.|+++-.|+.+++.|...|++|.++.+....++
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~  188 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIG  188 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHH
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHH
Confidence            78999999999999999999999999999999987544443

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.75  E-value=0.0029  Score=43.92  Aligned_cols=41  Identities=32%  Similarity=0.406  Sum_probs=36.1

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETEL   50 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~   50 (120)
                      +++||.++|.|.++-.|+.++..|+..|++|.++.+....+
T Consensus       158 ~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L  198 (286)
T 4a5o_A          158 DLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDL  198 (286)
T ss_dssp             CCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCH
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCH
Confidence            57999999999999999999999999999999997654333

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.75  E-value=0.0066  Score=41.61  Aligned_cols=86  Identities=16%  Similarity=0.047  Sum_probs=55.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHH-------HHh--cCCeEEEEeccCCCHHHHHHHH---
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE-------WKS--KGLQVSGNACDLKIRAQREKLM---   81 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~-------~~~--~~~~~~~~~~D~~~~~~~~~~~---   81 (120)
                      +++.|.|+ |.+|..+++.|++.|++|++.+|+++..+...+.       +.+  ...++.++.  +.++..++.++   
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~--vp~~~~~~~v~~~~   78 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAM--LADPAAAEEVCFGK   78 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEEC--CSSHHHHHHHHHST
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEE--cCCHHHHHHHHcCc
Confidence            45777775 8999999999999999999999998765544321       111  123343332  45556677777   


Q ss_pred             HHHHhhcCCcccEEEecCCCCC
Q 033396           82 ETVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        82 ~~~~~~~~g~id~li~~ag~~~  103 (120)
                      +++.... .+=.++|++.+...
T Consensus        79 ~~l~~~l-~~~~~vi~~st~~~   99 (287)
T 3pef_A           79 HGVLEGI-GEGRGYVDMSTVDP   99 (287)
T ss_dssp             TCHHHHC-CTTCEEEECSCCCH
T ss_pred             chHhhcC-CCCCEEEeCCCCCH
Confidence            5555554 33356777765543

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.74  E-value=0.0052  Score=43.02  Aligned_cols=87  Identities=9%  Similarity=0.068  Sum_probs=55.2

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHH---------HHh---cCCeEEEEeccCCCHHH
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQE---------WKS---KGLQVSGNACDLKIRAQ   76 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~--~v~~~~~~~~~~~~~~~~---------~~~---~~~~~~~~~~D~~~~~~   76 (120)
                      +.-+++.|.| .|.+|.++++.|.+.|+  +|++++++++..+...+.         +.+   ...++.++..-.   ..
T Consensus        31 ~~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~---~~  106 (314)
T 3ggo_A           31 LSMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPV---RT  106 (314)
T ss_dssp             CSCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCG---GG
T ss_pred             cCCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCH---HH
Confidence            3346788888 59999999999999998  999999998766544321         111   123444433322   23


Q ss_pred             HHHHHHHHHhhcCCcccEEEecCCCC
Q 033396           77 REKLMETVSSQFDGKLNILVSSAQLP  102 (120)
Q Consensus        77 ~~~~~~~~~~~~~g~id~li~~ag~~  102 (120)
                      +..+++++...+ .+=-+++.++++.
T Consensus       107 ~~~vl~~l~~~l-~~~~iv~d~~Svk  131 (314)
T 3ggo_A          107 FREIAKKLSYIL-SEDATVTDQGSVK  131 (314)
T ss_dssp             HHHHHHHHHHHS-CTTCEEEECCSCC
T ss_pred             HHHHHHHHhhcc-CCCcEEEECCCCc
Confidence            566676666655 2223566666654

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.73  E-value=0.00021  Score=51.16  Aligned_cols=39  Identities=28%  Similarity=0.368  Sum_probs=34.7

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE   49 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~   49 (120)
                      ++++|++.|.|. |.+|..+++.+...|++|++.|++...
T Consensus       172 ~L~GktV~I~G~-GnVG~~~A~~l~~~GakVvvsD~~~~~  210 (355)
T 1c1d_A          172 SLDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTER  210 (355)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCccH
Confidence            578999999975 899999999999999999988887654

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.72  E-value=0.0039  Score=43.55  Aligned_cols=39  Identities=23%  Similarity=0.266  Sum_probs=35.4

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET   48 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~   48 (120)
                      +++||.++|.|+++-+|+.++..|+..|++|.++.+...
T Consensus       162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~  200 (300)
T 4a26_A          162 EMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS  200 (300)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC
Confidence            579999999999999999999999999999999987543

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=96.71  E-value=0.027  Score=41.82  Aligned_cols=40  Identities=25%  Similarity=0.304  Sum_probs=33.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHH
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQ   55 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~   55 (120)
                      .+.|.|+ |.+|..++..|++.|++|++.+++++.++...+
T Consensus         7 kVgVIGa-G~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~   46 (483)
T 3mog_A            7 TVAVIGS-GTMGAGIAEVAASHGHQVLLYDISAEALTRAID   46 (483)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Confidence            4566666 899999999999999999999999877665544

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=96.71  E-value=0.013  Score=41.09  Aligned_cols=79  Identities=18%  Similarity=0.160  Sum_probs=47.9

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC-
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD-   89 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-   89 (120)
                      .+.+++|.|+ +++|...+..+... |++|+.+++++.+++..    .+.+....+   |.++.+..+++    .+..+ 
T Consensus       163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~----~~~Ga~~~i---~~~~~~~~~~v----~~~t~g  230 (348)
T 4eez_A          163 PGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLA----KKIGADVTI---NSGDVNPVDEI----KKITGG  230 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHH----HHTTCSEEE---EC-CCCHHHHH----HHHTTS
T ss_pred             CCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhh----hhcCCeEEE---eCCCCCHHHHh----hhhcCC
Confidence            5789999987 77887777777665 68999999988765322    233544332   34443332322    22221 


Q ss_pred             CcccEEEecCCCC
Q 033396           90 GKLNILVSSAQLP  102 (120)
Q Consensus        90 g~id~li~~ag~~  102 (120)
                      ..+|.++.+++..
T Consensus       231 ~g~d~~~~~~~~~  243 (348)
T 4eez_A          231 LGVQSAIVCAVAR  243 (348)
T ss_dssp             SCEEEEEECCSCH
T ss_pred             CCceEEEEeccCc
Confidence            2577778777653

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=96.70  E-value=0.0067  Score=52.87  Aligned_cols=82  Identities=13%  Similarity=0.163  Sum_probs=53.8

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC-C
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD-G   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-g   90 (120)
                      .|.+++|.|++|++|.+.+......|++|+.+.+++++.+.+.+.+...+....   .|..+.+..    +++.+..+ .
T Consensus      1667 ~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v---~~~~~~~~~----~~i~~~t~g~ 1739 (2512)
T 2vz8_A         1667 PGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCF---ANSRDTSFE----QHVLRHTAGK 1739 (2512)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTE---EESSSSHHH----HHHHHTTTSC
T ss_pred             CCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEE---ecCCCHHHH----HHHHHhcCCC
Confidence            678999999999999999888888999999999887766544432212232221   234443322    23333221 3


Q ss_pred             cccEEEecCC
Q 033396           91 KLNILVSSAQ  100 (120)
Q Consensus        91 ~id~li~~ag  100 (120)
                      ++|+++++.|
T Consensus      1740 GvDvVld~~g 1749 (2512)
T 2vz8_A         1740 GVDLVLNSLA 1749 (2512)
T ss_dssp             CEEEEEECCC
T ss_pred             CceEEEECCC
Confidence            6999999876

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.69  E-value=0.009  Score=42.64  Aligned_cols=90  Identities=12%  Similarity=0.123  Sum_probs=57.2

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHH----------HH-Hhc-CCeEEEEeccCCCHHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQ----------EW-KSK-GLQVSGNACDLKIRAQ   76 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~----------~~-~~~-~~~~~~~~~D~~~~~~   76 (120)
                      .+++.+.+.|.|. |.+|..+++.|++.|++|++++|+++..+.+.+          ++ ... ..++.++.+  .+. .
T Consensus        18 ~Mm~~mkIgiIGl-G~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~v--p~~-~   93 (358)
T 4e21_A           18 LYFQSMQIGMIGL-GRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMV--PAA-V   93 (358)
T ss_dssp             ----CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECS--CGG-G
T ss_pred             hhhcCCEEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeC--CHH-H
Confidence            3466778888884 899999999999999999999999876554332          11 111 124444432  322 5


Q ss_pred             HHHHHHHHHhhcCCcccEEEecCCCCC
Q 033396           77 REKLMETVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        77 ~~~~~~~~~~~~~g~id~li~~ag~~~  103 (120)
                      ++.+++++...+ .+=+++|.+.....
T Consensus        94 v~~vl~~l~~~l-~~g~iiId~st~~~  119 (358)
T 4e21_A           94 VDSMLQRMTPLL-AANDIVIDGGNSHY  119 (358)
T ss_dssp             HHHHHHHHGGGC-CTTCEEEECSSCCH
T ss_pred             HHHHHHHHHhhC-CCCCEEEeCCCCCh
Confidence            677777776665 34467777766553

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.68  E-value=0.024  Score=40.08  Aligned_cols=78  Identities=10%  Similarity=0.002  Sum_probs=54.2

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhc---CCeEEEEeccCCCHHHHHHHHHHHH
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSK---GLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      ...+.+.|+|+ |.+|..++..|+..|.  +|+++|.+...++....++...   ......+..  .|.+          
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~----------   83 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYS----------   83 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGG----------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHH----------
Confidence            45678899997 9999999999999885  8999999987776655555432   111112211  1211          


Q ss_pred             hhcCCcccEEEecCCCCC
Q 033396           86 SQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~  103 (120)
                       .+ ...|++|.++|.+.
T Consensus        84 -~~-~~aDiVvi~aG~~~   99 (331)
T 4aj2_A           84 -VT-ANSKLVIITAGARQ   99 (331)
T ss_dssp             -GG-TTEEEEEECCSCCC
T ss_pred             -Hh-CCCCEEEEccCCCC
Confidence             12 57899999999876

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.67  E-value=0.015  Score=40.24  Aligned_cols=80  Identities=13%  Similarity=0.125  Sum_probs=53.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH-HHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-LNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      +++.|.||.|.+|.++++.|.+.|++|+++++++.. ..+..     ...++.++.+-.   ..+..+++++...+ .+=
T Consensus        22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~~~~~~~-----~~aDvVilavp~---~~~~~vl~~l~~~l-~~~   92 (298)
T 2pv7_A           22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESIL-----ANADVVIVSVPI---NLTLETIERLKPYL-TEN   92 (298)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHH-----TTCSEEEECSCG---GGHHHHHHHHGGGC-CTT
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcccCHHHHh-----cCCCEEEEeCCH---HHHHHHHHHHHhhc-CCC
Confidence            468889988999999999999999999999987643 21111     244565555433   23666777765554 222


Q ss_pred             cEEEecCCCC
Q 033396           93 NILVSSAQLP  102 (120)
Q Consensus        93 d~li~~ag~~  102 (120)
                      -+++..+++.
T Consensus        93 ~iv~~~~svk  102 (298)
T 2pv7_A           93 MLLADLTSVK  102 (298)
T ss_dssp             SEEEECCSCC
T ss_pred             cEEEECCCCC
Confidence            3566666654

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.67  E-value=0.02  Score=38.59  Aligned_cols=86  Identities=13%  Similarity=0.071  Sum_probs=55.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCE-EEEeeCChHHHHHHHHHHH--------hc--CCeEEEEeccCCCHHHHHHHH
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETELNQRIQEWK--------SK--GLQVSGNACDLKIRAQREKLM   81 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~-v~~~~~~~~~~~~~~~~~~--------~~--~~~~~~~~~D~~~~~~~~~~~   81 (120)
                      +..+.|.|+ |.+|..+++.|++.|++ |.+++|+++..+...+.+.        +.  ..++.++.   ..+..+..++
T Consensus        10 ~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~a---v~~~~~~~v~   85 (266)
T 3d1l_A           10 DTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVS---LKDSAFAELL   85 (266)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEEC---CCHHHHHHHH
T ss_pred             CCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEe---cCHHHHHHHH
Confidence            446888887 99999999999999988 8899999877766554421        11  22332222   2334567777


Q ss_pred             HHHHhhcCCcccEEEecCCCCC
Q 033396           82 ETVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        82 ~~~~~~~~g~id~li~~ag~~~  103 (120)
                      +++.... .+=.+++++.+...
T Consensus        86 ~~l~~~~-~~~~ivv~~s~~~~  106 (266)
T 3d1l_A           86 QGIVEGK-REEALMVHTAGSIP  106 (266)
T ss_dssp             HHHHTTC-CTTCEEEECCTTSC
T ss_pred             HHHHhhc-CCCcEEEECCCCCc
Confidence            7766544 23246777665433

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.67  E-value=0.012  Score=40.72  Aligned_cols=86  Identities=10%  Similarity=0.054  Sum_probs=53.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHH--------HHh--cCCeEEEEeccCCCHHHHHHHH--
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE--------WKS--KGLQVSGNACDLKIRAQREKLM--   81 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~--------~~~--~~~~~~~~~~D~~~~~~~~~~~--   81 (120)
                      +++.|.|+ |.+|..+++.|++.|++|++.+|+++..+...+.        +.+  ...++.+  .-+.++..++.++  
T Consensus         8 ~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi--~~vp~~~~~~~v~~~   84 (303)
T 3g0o_A            8 FHVGIVGL-GSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALV--ILVVNAAQVRQVLFG   84 (303)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEE--ECCSSHHHHHHHHC-
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEE--EECCCHHHHHHHHhC
Confidence            45777765 8999999999999999999999998776655432        011  0223322  2244445566655  


Q ss_pred             -HHHHhhcCCcccEEEecCCCCC
Q 033396           82 -ETVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        82 -~~~~~~~~g~id~li~~ag~~~  103 (120)
                       +++...+ .+=.++|++.....
T Consensus        85 ~~~l~~~l-~~g~ivv~~st~~~  106 (303)
T 3g0o_A           85 EDGVAHLM-KPGSAVMVSSTISS  106 (303)
T ss_dssp             -CCCGGGS-CTTCEEEECSCCCH
T ss_pred             hhhHHhhC-CCCCEEEecCCCCH
Confidence             4444444 33346676665543

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.67  E-value=0.029  Score=39.69  Aligned_cols=76  Identities=13%  Similarity=0.023  Sum_probs=52.1

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhc---C-CeEEEEeccCCCHHHHHHHHHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSK---G-LQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      ..+.+.|+|+ |.+|..++..++..|.  +|++.|.+++.++....++...   . ..-.....|..+            
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~------------   86 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV------------   86 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH------------
Confidence            4567889998 9999999999999885  8999999887665544444321   1 111111223221            


Q ss_pred             hhcCCcccEEEecCCCCC
Q 033396           86 SQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~  103 (120)
                        + ...|++|.++|.+.
T Consensus        87 --~-~daDiVIitaG~p~  101 (330)
T 3ldh_A           87 --S-AGSKLVVITAGARQ  101 (330)
T ss_dssp             --C-SSCSEEEECCSCCC
T ss_pred             --h-CCCCEEEEeCCCCC
Confidence              2 57899999998876

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.67  E-value=0.025  Score=40.22  Aligned_cols=80  Identities=18%  Similarity=0.135  Sum_probs=52.5

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCC-------EEEEeeCChH--HHHHHHHHHHhc--CCeEEEEeccCCCHHHHHH
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGA-------IVHTCSRNET--ELNQRIQEWKSK--GLQVSGNACDLKIRAQREK   79 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~-------~v~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~   79 (120)
                      ++.-.+.|+||+|+||..++..|+....       .+.++|..+.  .++-...++...  ......+..  ++.   ..
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~--~~~---~~   96 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT--ADP---RV   96 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE--SCH---HH
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc--CCh---HH
Confidence            5566899999999999999999988542       6889998653  344444445432  222222221  221   22


Q ss_pred             HHHHHHhhcCCcccEEEecCCCCC
Q 033396           80 LMETVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        80 ~~~~~~~~~~g~id~li~~ag~~~  103 (120)
                      .+        ...|++|..+|++.
T Consensus        97 a~--------~~advVvi~aG~pr  112 (345)
T 4h7p_A           97 AF--------DGVAIAIMCGAFPR  112 (345)
T ss_dssp             HT--------TTCSEEEECCCCCC
T ss_pred             Hh--------CCCCEEEECCCCCC
Confidence            23        67899999999987

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.66  E-value=0.0036  Score=42.90  Aligned_cols=73  Identities=22%  Similarity=0.315  Sum_probs=51.5

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      +++++.++|.|+ |++|+++++.|.+.|++|++++|+.+..+++.+++   +  +..  .+  +.   ..++        
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~---g--~~~--~~--~~---~~~~--------  184 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF---P--LEV--VN--SP---EEVI--------  184 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTS---C--EEE--CS--CG---GGTG--------
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHc---C--Cee--eh--hH---Hhhh--------
Confidence            467899999997 79999999999999999999999987665443322   2  211  11  11   1122        


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                      ...|++|++.....
T Consensus       185 ~~aDiVi~atp~~~  198 (275)
T 2hk9_A          185 DKVQVIVNTTSVGL  198 (275)
T ss_dssp             GGCSEEEECSSTTS
T ss_pred             cCCCEEEEeCCCCC
Confidence            46899999987654

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=96.66  E-value=0.0063  Score=42.15  Aligned_cols=38  Identities=24%  Similarity=0.299  Sum_probs=34.1

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHC--CCEEEEeeCCh
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAF--GAIVHTCSRNE   47 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~--g~~v~~~~~~~   47 (120)
                      +++||.++|.|++.-+|+.+++.|...  |++|.++.+..
T Consensus       155 ~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t  194 (281)
T 2c2x_A          155 SIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT  194 (281)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch
Confidence            689999999999888999999999999  89999886554

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=96.64  E-value=0.0042  Score=43.13  Aligned_cols=45  Identities=22%  Similarity=0.332  Sum_probs=38.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRI   54 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~   54 (120)
                      +++||.++|.|++.-+|+.+++.|+..|++|.++.+....+.+..
T Consensus       156 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~  200 (288)
T 1b0a_A          156 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHV  200 (288)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHH
T ss_pred             CCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHHHHh
Confidence            579999999999989999999999999999999987665444333

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.62  E-value=0.011  Score=42.27  Aligned_cols=65  Identities=14%  Similarity=0.026  Sum_probs=45.6

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLME   82 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   82 (120)
                      +.+.+++++|.|+ |.+|+.+++.+.+.|++|++++.++....      ....  ..++..|..|.+.+.++++
T Consensus         8 ~~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~------~~~a--d~~~~~~~~d~~~l~~~~~   72 (377)
T 3orq_A            8 KLKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPC------RYVA--HEFIQAKYDDEKALNQLGQ   72 (377)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTT------GGGS--SEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChh------hhhC--CEEEECCCCCHHHHHHHHH
Confidence            4467899999987 67999999999999999999987653210      0001  1244567777776666653

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.62  E-value=0.0033  Score=43.61  Aligned_cols=38  Identities=32%  Similarity=0.406  Sum_probs=34.5

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      +++||.++|.|+++-+|+.++..|...|++|.++.+..
T Consensus       158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t  195 (285)
T 3l07_A          158 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT  195 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            57999999999999899999999999999999887653

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.60  E-value=0.0022  Score=44.82  Aligned_cols=38  Identities=32%  Similarity=0.351  Sum_probs=33.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHH
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQ   52 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~   52 (120)
                      +++|+|++|++|...+..+...|++|+.+++++.+++.
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~  190 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADY  190 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            79999999999999999888899999999988665543

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.57  E-value=0.019  Score=39.39  Aligned_cols=83  Identities=17%  Similarity=0.072  Sum_probs=56.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCC---EEEEeeCChHHHHHHHHHHH--------h--cCCeEEEEeccCCCHHHHHHH
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGA---IVHTCSRNETELNQRIQEWK--------S--KGLQVSGNACDLKIRAQREKL   80 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~---~v~~~~~~~~~~~~~~~~~~--------~--~~~~~~~~~~D~~~~~~~~~~   80 (120)
                      +++.|.|+ |.+|.++++.|++.|+   +|++++|+++..+...+.+.        +  ...++.++..   .+..+..+
T Consensus         4 ~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~v   79 (280)
T 3tri_A            4 SNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKMV   79 (280)
T ss_dssp             SCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHHH
T ss_pred             CEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHHH
Confidence            45777777 9999999999999998   89999999887766554311        1  1345554443   34667778


Q ss_pred             HHHHHhh-cCCcccEEEecCCC
Q 033396           81 METVSSQ-FDGKLNILVSSAQL  101 (120)
Q Consensus        81 ~~~~~~~-~~g~id~li~~ag~  101 (120)
                      ++++... + .+=.++|.+++-
T Consensus        80 l~~l~~~~l-~~~~iiiS~~ag  100 (280)
T 3tri_A           80 CEELKDILS-ETKILVISLAVG  100 (280)
T ss_dssp             HHHHHHHHH-TTTCEEEECCTT
T ss_pred             HHHHHhhcc-CCCeEEEEecCC
Confidence            8887765 5 222367765443

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=96.56  E-value=0.01  Score=45.50  Aligned_cols=82  Identities=11%  Similarity=0.180  Sum_probs=55.2

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCCh-------------------HHHHHHHHHHHhc--CCeEEEE
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNE-------------------TELNQRIQEWKSK--GLQVSGN   67 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~-------------------~~~~~~~~~~~~~--~~~~~~~   67 (120)
                      .+.+..++|.|+ ||+|..+++.|+..| .++.++|.+.                   .+.+.+.+.+.+.  ..++..+
T Consensus        14 kL~~s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~v~V~a~   92 (640)
T 1y8q_B           14 AVAGGRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAY   92 (640)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTTCEEEEE
T ss_pred             HHhcCeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCCCeEEEE
Confidence            366788999998 899999999999999 5788887642                   2234445555554  4666777


Q ss_pred             eccCCCHHHHHHHHHHHHhhcCCcccEEEecCC
Q 033396           68 ACDLKIRAQREKLMETVSSQFDGKLNILVSSAQ  100 (120)
Q Consensus        68 ~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag  100 (120)
                      ..+++.......++        ..+|+||.+..
T Consensus        93 ~~~i~~~~~~~~~~--------~~~DlVvda~D  117 (640)
T 1y8q_B           93 HDSIMNPDYNVEFF--------RQFILVMNALD  117 (640)
T ss_dssp             ESCTTSTTSCHHHH--------TTCSEEEECCS
T ss_pred             ecccchhhhhHhhh--------cCCCEEEECCC
Confidence            77775432112233        56788887753

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=96.53  E-value=0.011  Score=43.35  Aligned_cols=78  Identities=17%  Similarity=0.276  Sum_probs=51.5

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCCh-------------------HHHHHHHHHHHhc--CCeEEEEe
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNE-------------------TELNQRIQEWKSK--GLQVSGNA   68 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~-------------------~~~~~~~~~~~~~--~~~~~~~~   68 (120)
                      ++++.++|.|+ ||+|.++++.|+..| .++.++|.+.                   .+.+...+.+.+.  ..++..+.
T Consensus        38 L~~~~VlvvG~-GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~~  116 (434)
T 1tt5_B           38 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF  116 (434)
T ss_dssp             HHTCCEEEECS-STHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEE
T ss_pred             hcCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCCCEEEEEe
Confidence            46788999987 899999999999999 4688886431                   2344555555553  35566666


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCcccEEEecC
Q 033396           69 CDLKIRAQREKLMETVSSQFDGKLNILVSSA   99 (120)
Q Consensus        69 ~D~~~~~~~~~~~~~~~~~~~g~id~li~~a   99 (120)
                      .++++..  ..++        ...|+||.+.
T Consensus       117 ~~i~~~~--~~~~--------~~~DlVi~~~  137 (434)
T 1tt5_B          117 NKIQDFN--DTFY--------RQFHIIVCGL  137 (434)
T ss_dssp             SCGGGBC--HHHH--------TTCSEEEECC
T ss_pred             cccchhh--HHHh--------cCCCEEEECC
Confidence            5554321  1223        4578887764

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.51  E-value=0.026  Score=37.01  Aligned_cols=66  Identities=15%  Similarity=0.165  Sum_probs=45.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .+..+++.|.| .|.+|.++++.|++.|++|++.+|+++         .....++.++..  . +..+..+++++...+
T Consensus        16 ~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~---------~~~~aD~vi~av--~-~~~~~~v~~~l~~~~   81 (209)
T 2raf_A           16 YFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ---------ATTLGEIVIMAV--P-YPALAALAKQYATQL   81 (209)
T ss_dssp             ----CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC---------CSSCCSEEEECS--C-HHHHHHHHHHTHHHH
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH---------HhccCCEEEEcC--C-cHHHHHHHHHHHHhc
Confidence            45677888998 599999999999999999999998765         112345555443  2 555677777665555

>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}

Probab=96.50  E-value=0.054  Score=32.32  Aligned_cols=77  Identities=17%  Similarity=0.289  Sum_probs=59.6

Q ss_pred             EEecCCCchHHHHHHHHHHCCCEEEEeeCC--hHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 033396           17 LVTGGTKGIGYAVVEELAAFGAIVHTCSRN--ETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        17 litGa~~~ig~~~a~~l~~~g~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   94 (120)
                      ++.....-|=..++++..++|-+|+++..+  +....+..++.+.+|..+..    +.|.+.+..-+.++++++ +.+|+
T Consensus         6 vvfssdpeilkeivreikrqgvrvvllysdqdekrrrerleefekqgvdvrt----vedkedfrenireiwery-pqldv   80 (162)
T 2l82_A            6 VVFSSDPEILKEIVREIKRQGVRVVLLYSDQDEKRRRERLEEFEKQGVDVRT----VEDKEDFRENIREIWERY-PQLDV   80 (162)
T ss_dssp             EEEESCHHHHHHHHHHHHHTTCEEEEEECCSCHHHHHHHHHHHHTTTCEEEE----CCSHHHHHHHHHHHHHHC-TTCCE
T ss_pred             EEecCCHHHHHHHHHHHHhCCeEEEEEecCchHHHHHHHHHHHHHcCCceee----eccHHHHHHHHHHHHHhC-CCCcE
Confidence            344455667888999999999998888664  34456677788888887764    677888888999999999 89998


Q ss_pred             EEec
Q 033396           95 LVSS   98 (120)
Q Consensus        95 li~~   98 (120)
                      ++.-
T Consensus        81 vviv   84 (162)
T 2l82_A           81 VVIV   84 (162)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            6543

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=96.50  E-value=0.012  Score=41.89  Aligned_cols=80  Identities=14%  Similarity=0.244  Sum_probs=52.5

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCC-------------------hHHHHHHHHHHHhc--CCeEEEE
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRN-------------------ETELNQRIQEWKSK--GLQVSGN   67 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~~~~~--~~~~~~~   67 (120)
                      .++++.++|.|+ ||+|.++++.|+..|. ++.++|.+                   ..+.+...+.+.+.  ..++..+
T Consensus        33 ~L~~~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~  111 (346)
T 1y8q_A           33 RLRASRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVD  111 (346)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEE
Confidence            367889999997 8999999999999994 78888543                   13455666666664  3455555


Q ss_pred             eccCCCHHHHHHHHHHHHhhcCCcccEEEecCC
Q 033396           68 ACDLKIRAQREKLMETVSSQFDGKLNILVSSAQ  100 (120)
Q Consensus        68 ~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag  100 (120)
                      ..++++  ....++        ...|+||.+..
T Consensus       112 ~~~~~~--~~~~~~--------~~~dvVv~~~d  134 (346)
T 1y8q_A          112 TEDIEK--KPESFF--------TQFDAVCLTCC  134 (346)
T ss_dssp             CSCGGG--CCHHHH--------TTCSEEEEESC
T ss_pred             ecccCc--chHHHh--------cCCCEEEEcCC
Confidence            555432  112222        45677776643

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.49  E-value=0.007  Score=41.07  Aligned_cols=46  Identities=35%  Similarity=0.395  Sum_probs=38.4

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW   57 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~   57 (120)
                      ++++ +++|.|+ |++|+++++.|.+.|++|.+++|+.+..++..+++
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~  159 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF  159 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence            4677 8999997 77999999999999999999999987766665544

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=96.49  E-value=0.0045  Score=43.28  Aligned_cols=42  Identities=29%  Similarity=0.406  Sum_probs=36.7

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN   51 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~   51 (120)
                      +++|+.++|.|++.-+|+.+++.|...|++|.++.+....+.
T Consensus       162 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~  203 (301)
T 1a4i_A          162 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD  203 (301)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccHH
Confidence            579999999999999999999999999999999976654443

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=96.46  E-value=0.00096  Score=48.69  Aligned_cols=35  Identities=26%  Similarity=0.376  Sum_probs=31.6

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEE-EeeC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVH-TCSR   45 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~-~~~~   45 (120)
                      ++++++++|+| .|.+|..+++.|.+.|++|+ +.|+
T Consensus       215 ~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~  250 (419)
T 3aoe_E          215 DLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATS  250 (419)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcC
Confidence            57899999999 68999999999999999988 6677

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.41  E-value=0.033  Score=37.72  Aligned_cols=79  Identities=13%  Similarity=0.087  Sum_probs=54.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           15 TALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      .+.|.|++|.+|+.+++.+.+. +++++........+++...    ...+   +..|++.++.....+..+.++   +++
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~----~~~D---vvIDfT~p~a~~~~~~~a~~~---g~~   71 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD----GNTE---VVIDFTHPDVVMGNLEFLIDN---GIH   71 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH----TTCC---EEEECSCTTTHHHHHHHHHHT---TCE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc----cCCc---EEEEccChHHHHHHHHHHHHc---CCC
Confidence            4889999999999999999875 7887654332222222221    2333   346889888887777766553   578


Q ss_pred             EEEecCCCCC
Q 033396           94 ILVSSAQLPY  103 (120)
Q Consensus        94 ~li~~ag~~~  103 (120)
                      +|+-..|+..
T Consensus        72 ~VigTTG~~~   81 (245)
T 1p9l_A           72 AVVGTTGFTA   81 (245)
T ss_dssp             EEECCCCCCH
T ss_pred             EEEcCCCCCH
Confidence            8998888655

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.39  E-value=0.061  Score=37.63  Aligned_cols=76  Identities=14%  Similarity=0.137  Sum_probs=50.9

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHh----cCCeEEEEeccCCCHHHHHHHHHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKS----KGLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      ....+.|+|+ |.+|.+++..|+..+  ..|+++|.++..++.....+..    .+.++.... |  +           .
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~-----------~   69 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--E-----------Y   69 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--C-----------G
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--C-----------H
Confidence            3457889998 999999999999888  4899999987655543333322    122332222 1  1           1


Q ss_pred             hhcCCcccEEEecCCCCC
Q 033396           86 SQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~  103 (120)
                      +.+ ...|++|..+|.+.
T Consensus        70 ~a~-~~aDvVvi~ag~~~   86 (317)
T 3d0o_A           70 SDC-HDADLVVICAGAAQ   86 (317)
T ss_dssp             GGG-TTCSEEEECCCCCC
T ss_pred             HHh-CCCCEEEECCCCCC
Confidence            112 57899999999876

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.39  E-value=0.03  Score=39.37  Aligned_cols=77  Identities=12%  Similarity=0.070  Sum_probs=51.2

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhc----CCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSK----GLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      +.+.+.|+|+ |.+|.+++..|+..+. +|+++|++++.++....++...    +........  .+.    ..+     
T Consensus         4 ~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~----~a~-----   71 (321)
T 3p7m_A            4 ARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDY----KDL-----   71 (321)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCG----GGG-----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCH----HHH-----
Confidence            3456888885 9999999999999887 9999999887665444444421    112222111  111    122     


Q ss_pred             hcCCcccEEEecCCCCC
Q 033396           87 QFDGKLNILVSSAQLPY  103 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~  103 (120)
                         ...|++|+++|.+.
T Consensus        72 ---~~aDvVIi~ag~p~   85 (321)
T 3p7m_A           72 ---ENSDVVIVTAGVPR   85 (321)
T ss_dssp             ---TTCSEEEECCSCCC
T ss_pred             ---CCCCEEEEcCCcCC
Confidence               56899999999876

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=96.37  E-value=0.02  Score=41.96  Aligned_cols=41  Identities=27%  Similarity=0.303  Sum_probs=36.2

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETEL   50 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~   50 (120)
                      .++.||+++|.|. |.+|+.+++.|...|++|+++++++...
T Consensus       207 ~~L~GktVgIiG~-G~IG~~vA~~Lka~Ga~Viv~D~~p~~a  247 (436)
T 3h9u_A          207 VMIAGKTACVCGY-GDVGKGCAAALRGFGARVVVTEVDPINA  247 (436)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CcccCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCChhhh
Confidence            3578999999995 8899999999999999999999987554

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.35  E-value=0.015  Score=40.37  Aligned_cols=86  Identities=14%  Similarity=0.031  Sum_probs=53.7

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHH-------HHh--cCCeEEEEeccCCCHHHHHHHH---
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE-------WKS--KGLQVSGNACDLKIRAQREKLM---   81 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~-------~~~--~~~~~~~~~~D~~~~~~~~~~~---   81 (120)
                      +++.|.|+ |.+|..+++.|++.|++|++.+|+++..+.+.+.       +.+  ...++.++.  +.++..++.++   
T Consensus        22 ~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~--vp~~~~~~~v~~~~   98 (310)
T 3doj_A           22 MEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAM--LSDPCAALSVVFDK   98 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEEC--CSSHHHHHHHHHST
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEE--cCCHHHHHHHHhCc
Confidence            46777775 8999999999999999999999998765544321       111  123333332  44555566666   


Q ss_pred             HHHHhhcCCcccEEEecCCCCC
Q 033396           82 ETVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        82 ~~~~~~~~g~id~li~~ag~~~  103 (120)
                      +++.... .+=.++|++.....
T Consensus        99 ~~l~~~l-~~g~~vv~~st~~~  119 (310)
T 3doj_A           99 GGVLEQI-CEGKGYIDMSTVDA  119 (310)
T ss_dssp             TCGGGGC-CTTCEEEECSCCCH
T ss_pred             hhhhhcc-CCCCEEEECCCCCH
Confidence            4444444 33356677665543

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=96.32  E-value=0.01  Score=40.75  Aligned_cols=45  Identities=22%  Similarity=0.254  Sum_probs=38.6

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEW   57 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~   57 (120)
                      .++.++|.|+ ||.+++++..|++.|+ +|.++.|+.++.+++.+++
T Consensus       118 ~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~  163 (271)
T 1npy_A          118 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY  163 (271)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            4678999986 8999999999999996 7999999988877776665

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=96.31  E-value=0.0041  Score=48.75  Aligned_cols=79  Identities=13%  Similarity=0.178  Sum_probs=50.6

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC-C
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD-G   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-g   90 (120)
                      .|.+++|.|++|++|.+.+......|++|+.+.++. +.+.    +. .+....   .|..+.+..+    ++.+..+ .
T Consensus       345 ~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~----l~-lga~~v---~~~~~~~~~~----~i~~~t~g~  411 (795)
T 3slk_A          345 PGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQA----VE-LSREHL---ASSRTCDFEQ----QFLGATGGR  411 (795)
T ss_dssp             TTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGG----SC-SCGGGE---ECSSSSTHHH----HHHHHSCSS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhh----hh-cChhhe---eecCChhHHH----HHHHHcCCC
Confidence            578999999999999999888888999999988655 2211    11 233222   2344433222    2222221 3


Q ss_pred             cccEEEecCCCCC
Q 033396           91 KLNILVSSAQLPY  103 (120)
Q Consensus        91 ~id~li~~ag~~~  103 (120)
                      ++|+++++.|-..
T Consensus       412 GvDvVld~~gg~~  424 (795)
T 3slk_A          412 GVDVVLNSLAGEF  424 (795)
T ss_dssp             CCSEEEECCCTTT
T ss_pred             CeEEEEECCCcHH
Confidence            6999999987533

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	120
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	6e-31
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	7e-28
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-26
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	3e-22
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	1e-21
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	1e-20
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	8e-20
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	1e-19
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	3e-19
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	4e-19
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	1e-18
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	2e-18
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	2e-18
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	2e-18
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	2e-18
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	3e-18
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	3e-18
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-18
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	4e-18
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	4e-18
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	7e-18
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	7e-18
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	8e-18
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	1e-17
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	1e-17
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	1e-17
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	2e-17
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	3e-17
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	3e-17
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	4e-17
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	6e-17
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	7e-17
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	1e-16
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	1e-16
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	2e-16
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	3e-16
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	6e-16
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	2e-15
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	8e-15
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	4e-14
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-14
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	6e-14
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	7e-14
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	7e-14
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	8e-14
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	4e-13
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	5e-13
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	6e-13
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	1e-12
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-12
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-12
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	4e-12
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	1e-11
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	3e-11
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	6e-11
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-10
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	3e-10
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	7e-10
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	2e-09
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	4e-09
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	5e-09
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	9e-09
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	1e-08
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	4e-08
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	5e-08
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	2e-07
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	3e-06
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	7e-06
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	2e-05
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	2e-05
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	3e-05
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	7e-05
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	9e-05
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	1e-04
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	3e-04
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	3e-04
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	4e-04
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	4e-04
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	0.001
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	0.001
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	0.001
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	0.002
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	0.003
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	0.003

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  108 bits (271), Expect = 6e-31
 Identities = 57/93 (61%), Positives = 76/93 (81%)

Query: 7  KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSG 66
          +RWSLK  T LVTGGTKGIG+A+VEE A FGA++HTC+RNE ELN+ + +W+ KG QV+G
Sbjct: 2  QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTG 61

Query: 67 NACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          + CD  +R +REKLM+TVSS F GKL+IL+++ 
Sbjct: 62 SVCDASLRPEREKLMQTVSSMFGGKLDILINNL 94

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  100 bits (250), Expect = 7e-28
 Identities = 61/93 (65%), Positives = 76/93 (81%)

Query: 8   RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGN 67
           RWSLKG TALVTGG+KGIGYA+VEELA  GA V+TCSRNE EL++ ++ W+ KGL V G+
Sbjct: 1   RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGS 60

Query: 68  ACDLKIRAQREKLMETVSSQFDGKLNILVSSAQ 100
            CDL  R +R+KLM+TV+  FDGKLNILV++A 
Sbjct: 61  VCDLLSRTERDKLMQTVAHVFDGKLNILVNNAG 93

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 96.6 bits (240), Expect = 2e-26
 Identities = 54/92 (58%), Positives = 75/92 (81%)

Query: 8  RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGN 67
          RW+L+G TALVTGG++GIGY +VEELA+ GA V+TCSRN+ ELN  + +W+SKG +V  +
Sbjct: 3  RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEAS 62

Query: 68 ACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           CDL  R++R++LM TV++ F GKLNILV++A
Sbjct: 63 VCDLSSRSERQELMNTVANHFHGKLNILVNNA 94

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 85.9 bits (212), Expect = 3e-22
 Identities = 33/92 (35%), Positives = 55/92 (59%), Gaps = 2/92 (2%)

Query: 9  WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGN 67
          + L+G  ALVTGG++G+G+ + + LA  G  V   SRN  E ++  Q+   K G++    
Sbjct: 1  FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAF 60

Query: 68 ACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           CD+    + +KL+E V  +F GKL+ +V++A
Sbjct: 61 RCDVSNYEEVKKLLEAVKEKF-GKLDTVVNAA 91

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.5 bits (206), Expect = 1e-21
 Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 1/97 (1%)

Query: 7   KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSG 66
           +R S+ G   L+TG   GIG     E A   + +     N+  L +   + K  G +V  
Sbjct: 1   RRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHT 60

Query: 67  NACDLKIRAQREKLMETVSSQFDGKLNILVSSAQLPY 103
              D   R       + V ++  G ++ILV++A + Y
Sbjct: 61  FVVDCSNREDIYSSAKKVKAEI-GDVSILVNNAGVVY 96

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 81.6 bits (201), Expect = 1e-20
 Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 6/99 (6%)

Query: 1  MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
            + R     L G  A++TG   GIG  +    A  GA V     N    N  + E +  
Sbjct: 4  SDNLR-----LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL 58

Query: 61 GLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          G Q     CD+    +   L +   S+  GK++ILV++A
Sbjct: 59 GGQAFACRCDITSEQELSALADFAISKL-GKVDILVNNA 96

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 79.2 bits (195), Expect = 8e-20
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 3/89 (3%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          LK   A++TGG  GIG A+ E  A  GA +           +     ++ G +V    CD
Sbjct: 3  LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAE--AAIRNLGRRVLTVKCD 60

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +      E   + V S F G+ +ILV++A
Sbjct: 61 VSQPGDVEAFGKQVISTF-GRCDILVNNA 88

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 78.8 bits (194), Expect = 1e-19
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 4/92 (4%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL---QVSGN 67
               A++TG + GIG A     A  GA V    R+   L +  Q+  + G+    V+  
Sbjct: 3  FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 62

Query: 68 ACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            D+   A +++++ T   +F GKL+ILV++A
Sbjct: 63 VADVTTDAGQDEILSTTLGKF-GKLDILVNNA 93

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 77.8 bits (191), Expect = 3e-19
 Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 4/102 (3%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL---QVSGN 67
             G + ++TG + GIG +     A  GA V    RNE  L +  Q+    G+   +++  
Sbjct: 2   FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 61

Query: 68  ACDLKIRAQREKLMETVSSQFDGKLNILVSSAQLPYSQRKFF 109
             D+   + ++ ++ T  ++F GK++ILV++A    +     
Sbjct: 62  VADVTEASGQDDIINTTLAKF-GKIDILVNNAGANLADGTAN 102

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 77.7 bits (191), Expect = 4e-19
 Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 4/92 (4%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL---QVSGN 67
              T ++TG + GIG       A  GA V    R+   L +  Q     G+   QV+  
Sbjct: 3  FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 62

Query: 68 ACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
            D+     +++++ +   QF GK+++LV++A
Sbjct: 63 VADVTTEDGQDQIINSTLKQF-GKIDVLVNNA 93

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 75.8 bits (186), Expect = 1e-18
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 4/89 (4%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          L+G  ALVTGG  G+G  VV+ L   GA V     NE    Q   E   + + V     D
Sbjct: 4  LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFV---RHD 60

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +   A    +M  V  +  G LN+LV++A
Sbjct: 61 VSSEADWTLVMAAVQRRL-GTLNVLVNNA 88

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.7 bits (186), Expect = 2e-18
 Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 3/91 (3%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL--QVSGNA 68
           +   ALVTG + GIG AV   L   G  V  C+R    + +   E KS G    +    
Sbjct: 8  WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYR 67

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          CDL        +   + SQ    ++I +++A
Sbjct: 68 CDLSNEEDILSMFSAIRSQH-SGVDICINNA 97

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 75.9 bits (186), Expect = 2e-18
 Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 2/87 (2%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-LNQRIQEWKSKGLQVSGNA 68
           SL+G  ALVTG  +GIG  +  EL   G  V     N TE   + +   K  G   +   
Sbjct: 15  SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVK 74

Query: 69  CDLKIRAQREKLMETVSSQFDGKLNIL 95
            ++ +     ++ E     F GKL+I+
Sbjct: 75  ANVGVVEDIVRMFEEAVKIF-GKLDIV 100

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 75.9 bits (186), Expect = 2e-18
 Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 2/95 (2%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW-KSKGLQVSGNA 68
           S    T +VTGG +GIG A    +AA GA V    R+  +  +  ++  K  G++     
Sbjct: 6   SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 65

Query: 69  CDLKIRAQREKLMETVSSQFDGKLNILVSSAQLPY 103
           CD+       K ++ + +   G ++ L+++A +  
Sbjct: 66  CDVSNTDIVTKTIQQIDADL-GPISGLIANAGVSV 99

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 75.5 bits (185), Expect = 2e-18
 Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 4/90 (4%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
           L G  ALV+GG +G+G + V  + A GA V      + E      E       V     D
Sbjct: 4   LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYV---HLD 60

Query: 71  LKIRAQREKLMETVSSQFDGKLNILVSSAQ 100
           +   AQ +  ++T  + F G L++LV++A 
Sbjct: 61  VTQPAQWKAAVDTAVTAF-GGLHVLVNNAG 89

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 75.2 bits (184), Expect = 3e-18
 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 3/94 (3%)

Query: 7   KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSG 66
           K+    G   LVTG    IG A    LA  G  +     N   L +     + KG++   
Sbjct: 1   KK--FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARS 58

Query: 67  NACDLKIRAQREKLMETVSSQFDGKLNILVSSAQ 100
             CD+         +++V   F GK++ L ++A 
Sbjct: 59  YVCDVTSEEAVIGTVDSVVRDF-GKIDFLFNNAG 91

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 75.0 bits (184), Expect = 3e-18
 Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 2/90 (2%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
           L G  A++TGGT GIG A+  +    GA V    R+     +  +   +   Q+     D
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQHD 62

Query: 71  LKIRAQREKLMETVSSQFDGKLNILVSSAQ 100
                   KL +     F G ++ LV++A 
Sbjct: 63  SSDEDGWTKLFDATEKAF-GPVSTLVNNAG 91

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 74.7 bits (183), Expect = 3e-18
 Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 6/89 (6%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          LK    L+TG   GIG A +E  A  GA +  C   E  L +  +   +  +       D
Sbjct: 3  LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVV-----MD 57

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +   A  E+      +   G+L+ +V  A
Sbjct: 58 VADPASVERGFAEALAHL-GRLDGVVHYA 85

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 74.8 bits (183), Expect = 4e-18
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 1/84 (1%)

Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLK 72
             ALVTG T GIG  +   L   G  V  C+R E  L   ++E +  G++  G  CD++
Sbjct: 2  SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR 61

Query: 73 IRAQREKLMETVSSQFDGKLNILV 96
             + E L+  V  ++ G +++LV
Sbjct: 62 SVPEIEALVAAVVERY-GPVDVLV 84

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 74.7 bits (183), Expect = 4e-18
 Identities = 21/101 (20%), Positives = 41/101 (40%), Gaps = 2/101 (1%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
           L+   A++TGG  GIG    +    +GA V      +    +      S    +S   CD
Sbjct: 4   LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISFVHCD 62

Query: 71  LKIRAQREKLMETVSSQFDGKLNILVSSAQLPYSQRKFFVK 111
           +        L++T  ++  GKL+I+  +  +  +     ++
Sbjct: 63  VTKDEDVRNLVDTTIAKH-GKLDIMFGNVGVLSTTPYSILE 102

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 74.1 bits (181), Expect = 7e-18
 Identities = 21/82 (25%), Positives = 29/82 (35%), Gaps = 1/82 (1%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR 74
           ALVTG  +GIG A+   L   G  V     N+        E    G        D+  R
Sbjct: 3  VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR 62

Query: 75 AQREKLMETVSSQFDGKLNILV 96
           Q    +E       G  +++V
Sbjct: 63 DQVFAAVEQARKTL-GGFDVIV 83

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 74.0 bits (181), Expect = 7e-18
 Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 4/89 (4%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          L G T LVTG   GIG A ++  A  GA +    R E  L + +   +++ + V     D
Sbjct: 3  LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAV---VAD 59

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          +      E +      +F G+L+ +   A
Sbjct: 60 VSDPKAVEAVFAEALEEF-GRLHGVAHFA 87

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 73.7 bits (181), Expect = 8e-18
 Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 7/89 (7%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
            G   LVTGG +GIG A+ +  A  GA+V  C     E  +  +       Q      D
Sbjct: 3  FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRP-EGKEVAEAIGGAFFQ-----VD 56

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          L+   +R + +E  +    G++++LV++A
Sbjct: 57 LEDERERVRFVEEAAYAL-GRVDVLVNNA 84

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 73.9 bits (181), Expect = 1e-17
 Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 4/86 (4%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          L G T ++TGG +G+G     +  A GA V      + E     +E    G        D
Sbjct: 3  LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLD 59

Query: 71 LKIRAQREKLMETVSSQFDGKLNILV 96
          + I    ++++     +F G ++ LV
Sbjct: 60 VTIEEDWQRVVAYAREEF-GSVDGLV 84

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 73.6 bits (180), Expect = 1e-17
 Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 3/91 (3%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL--QVSGNA 68
                L+TGG  G+G A    LAA GA +     +   L              +V    
Sbjct: 2  FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 61

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           D+   AQ E  +   + +F G+++   ++A
Sbjct: 62 ADVSDEAQVEAYVTATTERF-GRIDGFFNNA 91

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 73.1 bits (179), Expect = 1e-17
 Identities = 21/80 (26%), Positives = 40/80 (50%)

Query: 9  WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
          +  +   ALVTG  +GIG  + + LA   + V   SR +   +  + E KS G + SG A
Sbjct: 6  YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYA 65

Query: 69 CDLKIRAQREKLMETVSSQF 88
           D+  + +  +++  + ++ 
Sbjct: 66 GDVSKKEEISEVINKILTEH 85

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 73.2 bits (179), Expect = 2e-17
 Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 2/86 (2%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN-ETELNQRIQEWKSKGLQVSGNAC 69
          L+G   ++TG + G+G ++    A   A V    R+ E E N  ++E K  G +      
Sbjct: 5  LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64

Query: 70 DLKIRAQREKLMETVSSQFDGKLNIL 95
          D+ + +    L+++   +F GKL+++
Sbjct: 65 DVTVESDVINLVQSAIKEF-GKLDVM 89

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.8 bits (178), Expect = 3e-17
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 6/91 (6%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK-----SKGLQVS 65
          L+G  A+VTGG  GIG A+V+EL   G+ V   SR    L     E +     +K  +V 
Sbjct: 10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 69

Query: 66 GNACDLKIRAQREKLMETVSSQFDGKLNILV 96
             C+++   +   L+++    F GK+N LV
Sbjct: 70 PIQCNIRNEEEVNNLVKSTLDTF-GKINFLV 99

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 72.9 bits (178), Expect = 3e-17
 Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 2/95 (2%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGNA 68
           S +G  A +TGG  G+G  +   L++ GA     SR    L    ++  S+ G +V    
Sbjct: 22  SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQ 81

Query: 69  CDLKIRAQREKLMETVSSQFDGKLNILVSSAQLPY 103
           CD++     +  +  +     G  NI++++A   +
Sbjct: 82  CDVRDPDMVQNTVSELIKVA-GHPNIVINNAAGNF 115

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 71.9 bits (176), Expect = 4e-17
 Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
          +  G+ ALVTG  KGIG   V+ L A GA V   +R  ++L    +E       +     
Sbjct: 2  NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG----IEPVCV 57

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          DL      EK +  +     G +++LV++A
Sbjct: 58 DLGDWDATEKALGGI-----GPVDLLVNNA 82

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 71.8 bits (175), Expect = 6e-17
 Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 4/86 (4%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          L G TAL+TG  +GIG A  E     GA V     N         E       +   A D
Sbjct: 3  LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAI---ALD 59

Query: 71 LKIRAQREKLMETVSSQFDGKLNILV 96
          +  +A  ++ +  +  ++ G ++ILV
Sbjct: 60 VTDQASIDRCVAELLDRW-GSIDILV 84

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 71.2 bits (174), Expect = 7e-17
 Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 7/85 (8%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR 74
          TA+VT      G      L+  G  V     +  + ++       +    +         
Sbjct: 2  TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDE------LEAFAETYPQLKPMSE 55

Query: 75 AQREKLMETVSSQFDGKLNILVSSA 99
           +  +L+E V+S + G++++LVS+ 
Sbjct: 56 QEPAELIEAVTSAY-GQVDVLVSND 79

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 70.9 bits (173), Expect = 1e-16
 Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 2/87 (2%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
          L G  AL TG  +GIG  +  EL   GA +V     +     + + E K  G Q      
Sbjct: 4  LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 63

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILV 96
          D+   ++   L +   S F G L+ ++
Sbjct: 64 DISKPSEVVALFDKAVSHF-GGLDFVM 89

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 70.6 bits (172), Expect = 1e-16
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 3/88 (3%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW--KSKGLQVSGNA 68
          LKG  A+VTG T GIG  +   LAA GA +      +    ++++       G++V  + 
Sbjct: 2  LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILV 96
           DL        L++    Q  G+++ILV
Sbjct: 62 ADLSKGEAVRGLVDNAVRQM-GRIDILV 88

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 70.4 bits (172), Expect = 2e-16
 Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 4/89 (4%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          LKG   L+TGG  G+G A+V+   A GA V    ++   L +   +    G  V G   D
Sbjct: 3  LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETD---HGDNVLGIVGD 59

Query: 71 LKIRAQREKLMETVSSQFDGKLNILVSSA 99
          ++    +++      ++F GK++ L+ +A
Sbjct: 60 VRSLEDQKQAASRCVARF-GKIDTLIPNA 87

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.6 bits (170), Expect = 3e-16
 Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 9/87 (10%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
           L G   LVTG  KGIG   V+ L A GA V   SR + +L+  ++E       +     
Sbjct: 4  FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG----IEPVCV 59

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILV 96
          DL      E+ + +V     G +++LV
Sbjct: 60 DLGDWEATERALGSV-----GPVDLLV 81

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.9 bits (168), Expect = 6e-16
 Identities = 28/90 (31%), Positives = 37/90 (41%), Gaps = 3/90 (3%)

Query: 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNAC 69
           G  ALVTG  +GIG A  E L   GA V     N     Q       +    +     C
Sbjct: 2  NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQC 61

Query: 70 DLKIRAQREKLMETVSSQFDGKLNILVSSA 99
          D+  + Q       V   F G+L+ILV++A
Sbjct: 62 DVADQQQLRDTFRKVVDHF-GRLDILVNNA 90

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.7 bits (165), Expect = 2e-15
 Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 5/90 (5%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
             G   +VTGG +GIG  +V      GA V  C ++E+      +  + +        CD
Sbjct: 4   YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGG----RALEQELPGAVFILCD 59

Query: 71  LKIRAQREKLMETVSSQFDGKLNILVSSAQ 100
           +      + L+     +F  +L+ +V++A 
Sbjct: 60  VTQEDDVKTLVSETIRRFG-RLDCVVNNAG 88

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.0 bits (160), Expect = 8e-15
 Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 2/85 (2%)

Query: 16 ALVTGGTKGIGYAVVEELA-AFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR 74
          ALVTGG KGIG A+V +L   F   V   +R+ T     +Q+ +++GL    +  D+   
Sbjct: 6  ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL 65

Query: 75 AQREKLMETVSSQFDGKLNILVSSA 99
               L + +  ++ G L++LV++A
Sbjct: 66 QSIRALRDFLRKEY-GGLDVLVNNA 89

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 64.6 bits (157), Expect = 4e-14
 Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 13/98 (13%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIV---------HTCSRNETELNQRIQEWKSKG 61
            G   LVTG   G+G A     A  GA+V             +  +  ++ ++E + +G
Sbjct: 5  FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG 64

Query: 62 LQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA 99
           +   N   +      EKL++T    F G+++++V++A
Sbjct: 65 GKAVANYDSV---EAGEKLVKTALDTF-GRIDVVVNNA 98

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 63.5 bits (154), Expect = 4e-14
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 16/92 (17%)

Query: 11  LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
           ++    LV   ++GIG AV + L+  GA V  C+RNE  L +    +           CD
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY---------VVCD 52

Query: 71  LKIRAQREKLMETVSSQFDGKLNILVSSAQLP 102
             +R   + L E V      +++ILV +A  P
Sbjct: 53  --LRKDLDLLFEKV-----KEVDILVLNAGGP 77

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 63.6 bits (154), Expect = 6e-14
 Identities = 23/96 (23%), Positives = 34/96 (35%), Gaps = 12/96 (12%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNAC 69
                + LVTGG +GIG A+ + LAA G  V    R                  + G   
Sbjct: 4   PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-----------GLFGVEV 52

Query: 70  DLKIRAQREKLMETVSSQFDGKLNILVSSAQLPYSQ 105
           D+      ++    V       + +LVS+A L    
Sbjct: 53  DVTDSDAVDRAFTAVEEHQG-PVEVLVSNAGLSADA 87

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 63.7 bits (154), Expect = 7e-14
 Identities = 22/99 (22%), Positives = 47/99 (47%), Gaps = 8/99 (8%)

Query: 10  SLKGMTALVTGGTKGIGYAVVEELAAF---GAIVHTCSRNETELNQRIQEWKSK--GLQV 64
            L     ++TG ++G G A+  +LA     G+++   +R+E+ L Q  +E  ++   L+V
Sbjct: 3   GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKV 62

Query: 65  SGNACDLKIRAQREK---LMETVSSQFDGKLNILVSSAQ 100
              A DL   A  ++    +  +      +  +L+++A 
Sbjct: 63  VLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAA 101

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.6 bits (154), Expect = 7e-14
 Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 3/89 (3%)

Query: 3  DFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW-KSKG 61
          +FR +   L+G   +VTG +KGIG  +   LA  GA V   +R++  L + +    +   
Sbjct: 6  EFRPEM--LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA 63

Query: 62 LQVSGNACDLKIRAQREKLMETVSSQFDG 90
                A  ++     E+ +        G
Sbjct: 64 ASAHYIAGTMEDMTFAEQFVAQAGKLMGG 92

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 63.4 bits (153), Expect = 8e-14
 Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 7/91 (7%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW--KSKGLQVSGNACDLK 72
           A++TGG + IG+++   L   G  V    R+     QR+      ++         DL 
Sbjct: 3  AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 73 ----IRAQREKLMETVSSQFDGKLNILVSSA 99
              +    E +++     F G+ ++LV++A
Sbjct: 63 LSSSLLDCCEDIIDCSFRAF-GRCDVLVNNA 92

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 61.3 bits (148), Expect = 4e-13
 Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 8/86 (9%)

Query: 16 ALVTGGTKGIGYAVVEELAAFGA-------IVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
           L+TG  KGIG A+  E A           ++   SR   +L +   E +++G       
Sbjct: 4  LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTIT 63

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNI 94
           D+   A   +L   +  ++ G ++ 
Sbjct: 64 ADISDMADVRRLTTHIVERY-GHIDC 88

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 60.8 bits (147), Expect = 5e-13
 Identities = 13/89 (14%), Positives = 31/89 (34%), Gaps = 3/89 (3%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQ-EWKSKGLQVSGNA 68
           L     +      GIG     EL                     + +  +  + ++ + 
Sbjct: 2  DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 69 CDLKI-RAQREKLMETVSSQFDGKLNILV 96
           D+ +  A+ +KL++ +  Q    ++IL+
Sbjct: 62 YDVTVPVAESKKLLKKIFDQL-KTVDILI 89

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.7 bits (146), Expect = 6e-13
 Identities = 14/48 (29%), Positives = 23/48 (47%)

Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW 57
          S+KG+ A++TGG  G+G A  E L   GA         +    + ++ 
Sbjct: 2  SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL 49

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 60.3 bits (145), Expect = 1e-12
 Identities = 18/98 (18%), Positives = 38/98 (38%), Gaps = 6/98 (6%)

Query: 15  TALVTGGTKGIGYAVVEELAAFGAIVH--TCSRNETELNQRIQEWKSKGLQVSGNACDLK 72
           + +VTG  +GIG  +V++L     I H    +R+  +  +       K  +V      + 
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---KDSRVHVLPLTVT 61

Query: 73  IRAQREKLMETVSSQFDGK-LNILVSSAQLPYSQRKFF 109
                +  +  V        L++L+++A +  S     
Sbjct: 62  CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNT 99

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 60.2 bits (145), Expect = 1e-12
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
           +G  ALVTG ++GIG A+ E LAA GA V   + +E           + G  +     +
Sbjct: 2  FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGL---MLN 58

Query: 71 LKIRAQ 76
          +   A 
Sbjct: 59 VTDPAS 64

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 59.0 bits (142), Expect = 3e-12
 Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 1/74 (1%)

Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVH-TCSRNETELNQRIQEWKSKGLQVSGNACDLKIR 74
           +VTG ++GIG A+   L   G  V    +R+     +  ++ ++ G Q      D+   
Sbjct: 4  VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKE 63

Query: 75 AQREKLMETVSSQF 88
          A  E +M+T    +
Sbjct: 64 ADVEAMMKTAIDAW 77

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 58.8 bits (141), Expect = 4e-12
 Identities = 17/93 (18%), Positives = 32/93 (34%), Gaps = 17/93 (18%)

Query: 16  ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRA 75
            +++G   GIG A  + L A G  +      + E+                   DL    
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-----------------IADLSTAE 46

Query: 76  QREKLMETVSSQFDGKLNILVSSAQLPYSQRKF 108
            R++ +  V ++    ++ LV  A L    +  
Sbjct: 47  GRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVL 79

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 57.2 bits (137), Expect = 1e-11
 Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 4/92 (4%)

Query: 11  LKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
           L G  ALV G T  + +G+A+  +L   GA V    + E  L    ++            
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE-RLRPEAEKLAEALGGALLFR 64

Query: 69  CDLKIRAQREKLMETVSSQFDGKLNILVSSAQ 100
            D+    + + L   V   F G L+ LV +  
Sbjct: 65  ADVTQDEELDALFAGVKEAF-GGLDYLVHAIA 95

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.3 bits (135), Expect = 3e-11
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQ 52
          L G   ++T   +GIG A     A  GA V     NE++L +
Sbjct: 4  LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE 45

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 55.5 bits (132), Expect = 6e-11
 Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 4/88 (4%)

Query: 11 LKGMTALVTG--GTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
          LKG   L+ G    K I Y + +     GA +     NE  L +R++    +        
Sbjct: 3  LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE-SLEKRVRPIAQELNSPYVYE 61

Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILV 96
           D+      + L  +V     G L+ +V
Sbjct: 62 LDVSKEEHFKSLYNSVKKDL-GSLDFIV 88

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 54.7 bits (130), Expect = 1e-10
 Identities = 18/100 (18%), Positives = 38/100 (38%), Gaps = 20/100 (20%)

Query: 16  ALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKG------------- 61
           ALVTG  K +G ++ E L A G  +     R+  E N       ++              
Sbjct: 5   ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 64

Query: 62  -----LQVSGNACDLKIRAQREKLMETVSSQFDGKLNILV 96
                +  +  +  + +  +  +L+    + + G+ ++LV
Sbjct: 65  VATAPVSGADGSAPVTLFTRCAELVAACYTHW-GRCDVLV 103

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 53.6 bits (127), Expect = 3e-10
 Identities = 12/48 (25%), Positives = 18/48 (37%), Gaps = 2/48 (4%)

Query: 11 LKGMTALVTG--GTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE 56
          L G   LV+G      I + +       GA +     +   L QRI +
Sbjct: 4  LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD 51

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 52.1 bits (124), Expect = 7e-10
 Identities = 16/90 (17%), Positives = 27/90 (30%), Gaps = 11/90 (12%)

Query: 12  KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDL 71
           +    LV GG   +G   V+   A    V +    E E        K             
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVK----------MTD 50

Query: 72  KIRAQREKLMETVSSQF-DGKLNILVSSAQ 100
               Q +++   V     D K++ ++  A 
Sbjct: 51  SFTEQADQVTAEVGKLLGDQKVDAILCVAG 80

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 51.1 bits (121), Expect = 2e-09
 Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 3/74 (4%)

Query: 11 LKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNA 68
          L G   LVTG      I Y + + +   GA +    +N+ +L  R++E+ ++        
Sbjct: 3  LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQ 61

Query: 69 CDLKIRAQREKLME 82
          CD+   A  + +  
Sbjct: 62 CDVAEDASIDTMFA 75

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 50.5 bits (119), Expect = 4e-09
 Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 2/70 (2%)

Query: 10 SLKGMTALVTG--GTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGN 67
           L+G  A + G     G G+AV + LAA GA +   +             + K  Q    
Sbjct: 5  DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVL 64

Query: 68 ACDLKIRAQR 77
               +  ++
Sbjct: 65 PDGSLMEIKK 74

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 49.9 bits (118), Expect = 5e-09
 Identities = 11/82 (13%), Positives = 26/82 (31%), Gaps = 11/82 (13%)

Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRA 75
           +V GG   +G A++E     G  V     +  +                    +     
Sbjct: 5  VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVD----------GNKNWTE 54

Query: 76 QREKLMETVSSQFD-GKLNILV 96
          Q + ++E  +S     +++ + 
Sbjct: 55 QEQSILEQTASSLQGSQVDGVF 76

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 49.3 bits (116), Expect = 9e-09
 Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 4/70 (5%)

Query: 15 TALVTGGTKGIGYAVVEELAAF---GAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDL 71
          + L+TG  +G+G  +V+ L         + T  RN  +  + +++       +     DL
Sbjct: 4  SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA-KELEDLAKNHSNIHILEIDL 62

Query: 72 KIRAQREKLM 81
          +     +KL+
Sbjct: 63 RNFDAYDKLV 72

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 49.0 bits (116), Expect = 1e-08
 Identities = 13/37 (35%), Positives = 16/37 (43%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN 51
          +ALVTGG  G+G A    L A G  V          +
Sbjct: 3  SALVTGGASGLGRAAALALKARGYRVVVLDLRREGED 39

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.6 bits (112), Expect = 4e-08
 Identities = 10/72 (13%), Positives = 21/72 (29%), Gaps = 6/72 (8%)

Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSR------NETELNQRIQEWKSKGLQVSGNAC 69
           L+TG + GIG  +   LA+  +              +  L +  +        +     
Sbjct: 5  VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64

Query: 70 DLKIRAQREKLM 81
          D++         
Sbjct: 65 DVRDSKSVAAAR 76

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 47.3 bits (111), Expect = 5e-08
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)

Query: 5  REKRWSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQ 52
           +  W   G T LVTGGT G+G  +   LA  GA  +   SR+  + + 
Sbjct: 2  TDDEWKPTG-TVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADG 49

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 45.4 bits (106), Expect = 2e-07
 Identities = 14/75 (18%), Positives = 25/75 (33%)

Query: 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKI 73
          M   + GGT  +G  +   LA  G  +   SR E +   +  E++      S      + 
Sbjct: 1  MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNED 60

Query: 74 RAQREKLMETVSSQF 88
           A+   +        
Sbjct: 61 AAEACDIAVLTIPWE 75

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 41.8 bits (97), Expect = 3e-06
 Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 1/80 (1%)

Query: 5  REKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQV 64
          +    S+KG  A+V  GT  +G      LA  GA V  C R   +          +  +V
Sbjct: 15 KAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-KV 73

Query: 65 SGNACDLKIRAQREKLMETV 84
          +  A +    A R + ++  
Sbjct: 74 NVTAAETADDASRAEAVKGA 93

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 41.3 bits (95), Expect = 7e-06
 Identities = 15/49 (30%), Positives = 24/49 (48%)

Query: 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
          +G   LVTG    +   VVE+L   G  V   +R+ ++L    + W +K
Sbjct: 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAK 58

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 40.3 bits (93), Expect = 2e-05
 Identities = 10/45 (22%), Positives = 16/45 (35%)

Query: 5  REKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE 49
          RE+ W  + +   +TG    I   +   L   G  V      + E
Sbjct: 7  REQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNE 51

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 39.8 bits (91), Expect = 2e-05
 Identities = 11/50 (22%), Positives = 16/50 (32%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
           +G    VTG T   G  +   L   GA V   S     +    +  +  
Sbjct: 6  WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVA 55

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 39.5 bits (90), Expect = 3e-05
 Identities = 7/47 (14%), Positives = 13/47 (27%), Gaps = 2/47 (4%)

Query: 16 ALVTG--GTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
            + G   T G G+ + +EL+     +                   K
Sbjct: 5  CFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGK 51

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 38.6 bits (88), Expect = 7e-05
 Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 4/57 (7%)

Query: 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN----QRIQEWKSKGLQV 64
          K    L+ GGT  IG  +V    + G   +   R E   N    Q +  +K  G ++
Sbjct: 2  KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKL 58

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (86), Expect = 9e-05
 Identities = 7/47 (14%), Positives = 13/47 (27%)

Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW 57
          +      + G T   G   + +    G  V    R+ + L       
Sbjct: 1  MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRP 47

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 37.8 bits (86), Expect = 1e-04
 Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 6/74 (8%)

Query: 17 LVTGGTKGIGYAVVEELAAFGAIVHTCSRNET-----ELNQRIQEWKSKGLQ-VSGNACD 70
          L+ G T  IG  V +     G       R  T     E  Q ++ +K+ G   V G+  D
Sbjct: 7  LLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDD 66

Query: 71 LKIRAQREKLMETV 84
               +  K ++ V
Sbjct: 67 HASLVEAVKNVDVV 80

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 36.9 bits (84), Expect = 3e-04
 Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN-QRIQEWKSKG 61
          +ALVTG T   G  + + L   G  VH      +     R++E   +G
Sbjct: 2  SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEG 49

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 36.5 bits (83), Expect = 3e-04
 Identities = 11/59 (18%), Positives = 18/59 (30%)

Query: 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACD 70
          +  T  V G T   G +++   AA G  V     +   L     +         G   +
Sbjct: 2  QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLN 60

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.3 bits (82), Expect = 4e-04
 Identities = 9/41 (21%), Positives = 15/41 (36%), Gaps = 2/41 (4%)

Query: 14 MTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQ 52
           T LVTG +   G  V ++L       +     R+     +
Sbjct: 4  PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK 44

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (82), Expect = 4e-04
 Identities = 9/59 (15%), Positives = 23/59 (38%), Gaps = 3/59 (5%)

Query: 1  MSDFREKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAI--VHTCSRNETELNQRIQEW 57
          +S  RE    ++  +  + G +   G  +++E+   G    V    R +   ++   + 
Sbjct: 3  LSKLREDF-RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKN 60

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 34.8 bits (79), Expect = 0.001
 Identities = 13/37 (35%), Positives = 16/37 (43%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN 51
           AL+TG T   G  + E L   G  VH   R  +  N
Sbjct: 3  VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFN 39

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 34.6 bits (77), Expect = 0.001
 Identities = 8/29 (27%), Positives = 11/29 (37%)

Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVH 41
          G   +V GG    G+A    L+     V 
Sbjct: 1  GSRVMVIGGDGYCGWATALHLSKKNYEVC 29

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 34.4 bits (77), Expect = 0.001
 Identities = 7/38 (18%), Positives = 15/38 (39%)

Query: 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN 51
          M  L+TG    +G  + ++L      V      + ++ 
Sbjct: 2  MKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDIT 39

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 34.7 bits (78), Expect = 0.002
 Identities = 13/37 (35%), Positives = 16/37 (43%)

Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN 51
           AL+TG T   G  + E L   G  VH   R  +  N
Sbjct: 3  IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFN 39

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 33.8 bits (76), Expect = 0.003
 Identities = 16/61 (26%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 1  MSDFREKRWSLKGM--TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK 58
          MS + E R  L       L+TG    IG  ++E L      V       T   + + E +
Sbjct: 2  MSRYEELRKELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVR 61

Query: 59 S 59
          S
Sbjct: 62 S 62

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (76), Expect = 0.003
 Identities = 13/36 (36%), Positives = 16/36 (44%)

Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN 51
          AL+TG T   G  + E L   G  VH   R  +  N
Sbjct: 4  ALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFN 39

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	120
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.95
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.94
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.94
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.94
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.94
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.94
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.94
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.94
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.94
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.94
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.94
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.94
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.94
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.93
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.93
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.93
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.93
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.93
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.93
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.93
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.93
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.93
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.93
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.93
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.93
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.93
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.92
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.92
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.92
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.92
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.92
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.92
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.92
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.91
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.91
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.91
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.91
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.91
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.91
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.9
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.9
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.89
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.89
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.89
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.89
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.88
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.88
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.87
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.87
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.82
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.82
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.81
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.8
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.8
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.8
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.79
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.79
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.77
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.75
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.74
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.7
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.69
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.69
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.66
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.65
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.54
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.49
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.49
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.45
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.45
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.45
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.44
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.44
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.43
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.34
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.34
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.31
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.3
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.25
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.23
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.2
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.2
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.16
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.12
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.1
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.07
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	98.99
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	98.98
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	98.98
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	98.98
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	98.93
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	98.91
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	98.91
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.83
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	98.78
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.69
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	98.47
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.45
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.42
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.39
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.37
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	98.28
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.26
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	98.25
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.24
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.2
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	98.16
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	98.11
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	98.06
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	98.06
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.0
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.97
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.97
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.95
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.93
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.89
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.84
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.84
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.74
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.73
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.72
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.68
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.65
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.61
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.57
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.55
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.54
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.52
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.52
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.51
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.44
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.4
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.4
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.38
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.38
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	97.37
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.37
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.35
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	97.29
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	97.28
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	97.25
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	97.22
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	97.22
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	97.22
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.21
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	97.11
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	97.08
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.05
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.01
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.99
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.95
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.91
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.9
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	96.88
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.88
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.83
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	96.79
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	96.75
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.75
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.74
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.74
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.72
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	96.68
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	96.68
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.68
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.64
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	96.6
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	96.57
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.55
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.53
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.52
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	96.52
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	96.5
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	96.48
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.48
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	96.47
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.46
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	96.45
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	96.41
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.41
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	96.37
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.36
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	96.35
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.34
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.32
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	96.3
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.29
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.29
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.29
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.23
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.13
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	96.09
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	96.08
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	96.08
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	96.05
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.03
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	96.03
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	95.94
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	95.93
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.92
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	95.9
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	95.86
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	95.84
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.8
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	95.74
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	95.7
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	95.59
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	95.55
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.53
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	95.5
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	95.49
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	95.46
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	95.4
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	95.37
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.2
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.2
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	95.15
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.15
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	95.14
d1c4oa2	174	Nucleotide excision repair enzyme UvrB {Thermus th	95.11
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	95.08
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	95.06
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	95.06
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	95.03
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	94.9
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	94.86
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	94.75
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.74
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	94.7
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	94.62
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	94.55
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	94.53
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	94.5
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.49
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.38
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	94.34
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	94.25
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	94.25
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	94.24
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.19
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	94.18
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	94.09
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	94.06
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	94.05
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	94.0
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	93.94
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	93.85
d1a9xa2	138	Carbamoyl phosphate synthetase, large subunit allo	93.82
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	93.81
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	93.79
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	93.68
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.61
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	93.43
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	93.38
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	93.36
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	93.27
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	93.19
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	93.18
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	93.03
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	93.03
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	92.94
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	92.78
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	92.69
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	92.66
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	92.57
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	92.43
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	92.4
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	92.33
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	92.26
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	92.23
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	92.18
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	92.09
d1ccwa_	137	Glutamate mutase, small subunit {Clostridium cochl	91.99
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	91.97
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	91.94
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	91.84
d1t5la2	181	Nucleotide excision repair enzyme UvrB {Bacillus c	91.62
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	91.54
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	91.47
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	91.46
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	91.0
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	90.96
d1p5ja_	319	L-serine dehydratase {Human (Homo sapiens) [TaxId:	90.92
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	90.87
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	90.79
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	90.72
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	90.68
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	90.51
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	90.44
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	90.32
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	90.31
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	90.25
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	89.99
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	89.96
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	89.87
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	89.85
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	89.82
d1o58a_	293	O-acetylserine sulfhydrylase (Cysteine synthase) {	89.81
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	89.59
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	89.52
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	89.43
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	89.43
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	89.38
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	89.26
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	89.21
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	89.11
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	88.79
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	88.77
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	88.76
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	88.59
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	88.5
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	88.29
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	88.24
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	88.0
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	87.94
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	87.82
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	87.42
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	87.24
d1pvva2	163	Ornithine transcarbamoylase {Archaeon Pyrococcus f	87.12
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	87.09
d1hv8a2	155	Putative DEAD box RNA helicase {Archaeon Methanoco	87.09
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	86.89
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	86.69
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	86.68
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	86.54
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	86.54
d1im5a_	179	Pyrazinamidase/nicotinamidase {Archaeon Pyrococcus	86.49
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	86.45
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	86.4
d3bula2	156	Methionine synthase, C-terminal domain {Escherichi	86.38
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	86.35
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	86.08
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	86.08
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	85.95
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	85.78
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	85.61
d1wbha1	213	KDPG aldolase {Escherichia coli [TaxId: 562]}	85.59
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	85.57
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	85.52
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	85.5
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	85.45
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	85.31
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	85.1
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	85.07
d1trba2	126	Thioredoxin reductase {Escherichia coli [TaxId: 56	85.05
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	84.99
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	84.72
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	84.5
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	84.38
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	83.99
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	83.73
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	83.65
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	83.63
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	83.57
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	83.3
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	83.21
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	82.95
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	82.87
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	82.81
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	82.4
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	82.25
d2eyqa5	211	Transcription-repair coupling factor, TRCF {Escher	82.23
d2h00a1	250	Methyltransferase 10 domain containing protein MET	82.11
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	82.08
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	82.0
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	81.92
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	81.85
d1onfa1	259	Glutathione reductase {Plasmodium falciparum [TaxI	81.68
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	81.56
d1fl2a2	126	Alkyl hydroperoxide reductase subunit F (AhpF), C-	81.35
d1kdga1	360	Flavoprotein domain of flavocytochrome cellobiose	81.33
d1miob_	457	Nitrogenase iron-molybdenum protein, beta chain {C	81.24
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	81.05
d1vb3a1	428	Threonine synthase {Escherichia coli [TaxId: 562]}	80.99
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	80.95
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	80.88
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	80.85
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	80.77
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	80.75
d1lqta1	216	Ferredoxin:NADP reductase FprA {Mycobacterium tube	80.66
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	80.54
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	80.53
d1otha2	170	Ornithine transcarbamoylase {Human (Homo sapiens)	80.49
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	80.37
d1m1na_	477	Nitrogenase iron-molybdenum protein, alpha chain {	80.17
d1vdca2	130	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	80.13
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	80.12
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	80.09
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	80.03

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=4.1e-28  Score=165.43  Aligned_cols=112  Identities=25%  Similarity=0.312  Sum_probs=104.2

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .|.++||+++||||++|||+++|++|+++|++|++++|+++.++++.++++..+.++..+.+|++++++++++++++.++
T Consensus         6 ~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~   85 (255)
T d1fmca_           6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999999999999999988889999999999999999999999999


Q ss_pred             cCCcccEEEecCCCCC----------ccceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPY----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~----------~~~~~~~n~~g~~~~~~  120 (120)
                      + |++|+||||||+..          |++.+++|+.|+|+++|
T Consensus        86 ~-g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~  127 (255)
T d1fmca_          86 L-GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQ  127 (255)
T ss_dssp             H-SSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             c-CCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHH
Confidence            9 89999999999876          35778999999998764

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.94  E-value=1.3e-27  Score=163.27  Aligned_cols=113  Identities=49%  Similarity=0.843  Sum_probs=104.1

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +++++||++|||||++|||++++++|+++|++|++++|+++.+++..+++...+.++.++.+|++++++++++++++.++
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH   82 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999999999999988999999999999999999999999999


Q ss_pred             cCCcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                      +++++|+||||||+..           |++.+++|+.|+|+++|
T Consensus        83 ~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~  126 (259)
T d2ae2a_          83 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSV  126 (259)
T ss_dssp             TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             hCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEe
Confidence            8458999999999876           35778999999988764

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.3e-27  Score=162.07  Aligned_cols=112  Identities=24%  Similarity=0.324  Sum_probs=104.4

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +.++.||+++||||++|||+++|++|+++|++|++++|+.++++++.+++...+.+++.+.||++|+++++++++++.+.
T Consensus         2 ~~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~   81 (244)
T d1yb1a_           2 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE   81 (244)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999999999999999988999999999999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      + |++|++|||||+..+           ++.+++|+.|+++++|
T Consensus        82 ~-g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  124 (244)
T d1yb1a_          82 I-GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTK  124 (244)
T ss_dssp             T-CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHH
T ss_pred             c-CCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHH
Confidence            9 899999999999874           5678999999988764

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.94  E-value=1.1e-27  Score=163.26  Aligned_cols=108  Identities=28%  Similarity=0.485  Sum_probs=101.1

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .||++|||||++|||+++|++|+++|++|++++|+++.+++..++++..+.++..+.+|++|+++++++++++.+++ |+
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~-g~   79 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY-GP   79 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-CS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHh-CC
Confidence            48999999999999999999999999999999999999999999999888999999999999999999999999999 99


Q ss_pred             ccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           92 LNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        92 id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                      ||+||||||+..           |++.+++|+.|+++++|
T Consensus        80 iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~  119 (257)
T d2rhca1          80 VDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK  119 (257)
T ss_dssp             CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHH
Confidence            999999999977           35778999999998764

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.94  E-value=1.1e-27  Score=162.94  Aligned_cols=111  Identities=32%  Similarity=0.509  Sum_probs=101.1

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh-cCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+ .+.++..+.+|++++++++++++++.++
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999999998888887754 4788999999999999999999999999


Q ss_pred             cCCcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                      + |+||+||||||+..           |++.+++|+.|+|+++|
T Consensus        81 ~-g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~  123 (251)
T d1vl8a_          81 F-GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCR  123 (251)
T ss_dssp             H-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhh
Confidence            9 99999999999876           35678999999998764

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.94  E-value=1.9e-27  Score=162.43  Aligned_cols=114  Identities=51%  Similarity=0.841  Sum_probs=103.6

Q ss_pred             ccccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396            7 KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus         7 ~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      .++++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++...+.++..+.+|++++++++++++++.+
T Consensus         2 ~~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (259)
T d1xq1a_           2 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS   81 (259)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999999999999999988888999999999999999999999999


Q ss_pred             hcCCcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           87 QFDGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                      +++|++|+||||||+..           |++.+++|+.|+|+++|
T Consensus        82 ~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~  126 (259)
T d1xq1a_          82 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQ  126 (259)
T ss_dssp             HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeeh
Confidence            98678999999999976           35778999999988764

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.94  E-value=2.8e-27  Score=160.90  Aligned_cols=112  Identities=22%  Similarity=0.286  Sum_probs=104.2

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .+.+++|+++||||++|||+++|++|+++|++|++++|+++.++++.++++..+.++..+.+|++++++++++++++.++
T Consensus         5 ~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   84 (251)
T d2c07a1           5 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE   84 (251)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh
Confidence            46689999999999999999999999999999999999999999999999888889999999999999999999999999


Q ss_pred             cCCcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                      + |++|+||||||...           |++.+++|+.|+|+++|
T Consensus        85 ~-g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~  127 (251)
T d2c07a1          85 H-KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQ  127 (251)
T ss_dssp             C-SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHH
T ss_pred             c-CCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhh
Confidence            9 99999999999976           36778999999988764

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.94  E-value=3.8e-27  Score=161.13  Aligned_cols=111  Identities=22%  Similarity=0.336  Sum_probs=101.3

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .+++||+++||||++|||+++|++|+++|++|++++|+. +.+++..++++..+.++..+.+|++++++++++++++.++
T Consensus         3 ~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (261)
T d1geea_           3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            368999999999999999999999999999999999975 4677888888888999999999999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      + |+||+||||||+..+           ++.+++|+.|+|+++|
T Consensus        83 ~-G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~  125 (261)
T d1geea_          83 F-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSR  125 (261)
T ss_dssp             H-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             h-CCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHH
Confidence            9 999999999999763           5778999999988764

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.94  E-value=4.2e-27  Score=160.30  Aligned_cols=106  Identities=23%  Similarity=0.291  Sum_probs=99.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      |++|||||++|||+++|++|+++|++|++++|+++.++++.++++..+.++..+.+|++|+++++++++++.+++ |++|
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   80 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL-GGFD   80 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT-TCCC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh-CCcc
Confidence            788999999999999999999999999999999999999999999888999999999999999999999999999 9999


Q ss_pred             EEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           94 ILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        94 ~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                      +||||||+..           |++.+++|+.|+|+++|
T Consensus        81 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~  118 (255)
T d1gega_          81 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQ  118 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             EEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhh
Confidence            9999999976           35778999999988764

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.94  E-value=4.6e-27  Score=160.56  Aligned_cols=110  Identities=23%  Similarity=0.369  Sum_probs=102.1

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .++||+++||||++|||++++++|+++|++|++++|+++.+++..++++..+.++..+.+|++++++++++++++.+++ 
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   80 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF-   80 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence            3789999999999999999999999999999999999999999999998889999999999999999999999999999 


Q ss_pred             CcccEEEecCCCCC------------ccceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPY------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~------------~~~~~~~n~~g~~~~~~  120 (120)
                      |++|+||||||+..            |++.+++|+.++|+++|
T Consensus        81 g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~  123 (260)
T d1zema1          81 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLK  123 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCCeehhhhccccccCccccccHHHHHhhccccccccccchh
Confidence            99999999999864            35678999999988764

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.94  E-value=2.5e-27  Score=161.79  Aligned_cols=113  Identities=22%  Similarity=0.320  Sum_probs=101.3

Q ss_pred             ccccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh-cCCeEEEEeccCCCHHHHHHHHHHHH
Q 033396            7 KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KGLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus         7 ~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      +.+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+ .+.++..+.+|++++++++++++++.
T Consensus         3 ~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~   82 (260)
T d1h5qa_           3 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQID   82 (260)
T ss_dssp             EEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999999888877777754 47889999999999999999999999


Q ss_pred             hhcCCcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           86 SQFDGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                      +++ |++|+||||||+..           |++.+++|+.|+++++|
T Consensus        83 ~~~-g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  127 (260)
T d1h5qa_          83 ADL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCR  127 (260)
T ss_dssp             HHS-CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHh-CCCcEecccccccccCCHHHhccccccccccccccchhhhhh
Confidence            999 99999999999876           35678999999987753

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.94  E-value=5.9e-27  Score=159.90  Aligned_cols=109  Identities=21%  Similarity=0.293  Sum_probs=99.2

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++..+.+|++|+++++++++++.+++
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   81 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   81 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            68999999999999999999999999999999999999988888877654  5689999999999999999999999999


Q ss_pred             CCcccEEEecCCCCC------------ccceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPY------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~------------~~~~~~~n~~g~~~~~~  120 (120)
                       |++|+||||||+..            |++.+++|+.|+|+++|
T Consensus        82 -G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~  124 (258)
T d1iy8a_          82 -GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLE  124 (258)
T ss_dssp             -SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             -CCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhh
Confidence             99999999999764            35778999999998764

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.2e-26  Score=158.22  Aligned_cols=110  Identities=26%  Similarity=0.312  Sum_probs=100.1

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcC--CeEEEEeccCCCHHHHHHHHHHHHh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG--LQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      ..+++|++|||||++|||+++|++|+++|++|++++|++..++++.+++...+  .++..+.+|++++++++++++++.+
T Consensus         6 ~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~   85 (257)
T d1xg5a_           6 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS   85 (257)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            34899999999999999999999999999999999999999999999998764  6899999999999999999999999


Q ss_pred             hcCCcccEEEecCCCCCc-----------cceeeeeccceeccc
Q 033396           87 QFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~  119 (120)
                      ++ |+||+||||||....           .+.+++|+.|+|+++
T Consensus        86 ~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~  128 (257)
T d1xg5a_          86 QH-SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICT  128 (257)
T ss_dssp             HH-CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHH
T ss_pred             hc-CCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHH
Confidence            99 999999999999763           566888888888764

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.93  E-value=8.1e-27  Score=159.00  Aligned_cols=108  Identities=28%  Similarity=0.352  Sum_probs=98.1

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      |.+++|+++||||++|||+++|++|+++|++|++++|+.+.++++.+++   +.++..+.+|++++++++++++++.+++
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   77 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPAACAIALDVTDQASIDRCVAELLDRW   77 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHHHh
Confidence            3489999999999999999999999999999999999998888877766   6788999999999999999999999999


Q ss_pred             CCcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                       |++|+||||||+..           |++.+++|+.|+++++|
T Consensus        78 -g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~  119 (256)
T d1k2wa_          78 -GSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQ  119 (256)
T ss_dssp             -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             -CCccEEEeecccccccccccCCHHHHHhhhceeeeccccchh
Confidence             99999999999876           35778999999988754

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.93  E-value=2.6e-26  Score=156.65  Aligned_cols=113  Identities=55%  Similarity=0.869  Sum_probs=103.9

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +++++||++|||||++|||++++++|+++|++|++++|++++++++.+++...+..++++.+|++++++++++++++.+.
T Consensus         1 ~f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   80 (258)
T d1ae1a_           1 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV   80 (258)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999999999999999999888999999999999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      +++++|+||||||....           .+.+++|+.++++++|
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~  124 (258)
T d1ae1a_          81 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQ  124 (258)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             hCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccc
Confidence            86789999999999773           5678999999887753

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.93  E-value=1.1e-26  Score=158.62  Aligned_cols=110  Identities=25%  Similarity=0.355  Sum_probs=98.0

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHh-cCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWKS-KGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +++||++|||||++|||+++|++|+++|++|++++|++ ..+++..+++.+ .+.++.++.+|++|+++++++++++.++
T Consensus         1 ~L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (260)
T d1x1ta1           1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            36899999999999999999999999999999999975 557777777755 4788999999999999999999999999


Q ss_pred             cCCcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                      + |++|+||||||+..           |.+.+++|+.|+++++|
T Consensus        81 ~-G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~  123 (260)
T d1x1ta1          81 M-GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTA  123 (260)
T ss_dssp             H-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             h-CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccc
Confidence            9 99999999999976           35778999999988764

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.93  E-value=1.7e-26  Score=157.03  Aligned_cols=109  Identities=24%  Similarity=0.310  Sum_probs=99.0

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++.. +.++.++.+|++|+++++++++++.+++ 
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   80 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAF-   80 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC-CCcEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence            37899999999999999999999999999999999999888888887754 5678999999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      |++|+||||||+...           ++.+++|+.|+|+++|
T Consensus        81 G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~  122 (251)
T d1zk4a1          81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTR  122 (251)
T ss_dssp             SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCceEEEeccccccccchhcccccchhhhccccccccchhHH
Confidence            999999999999763           5678999999998764

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.93  E-value=1.5e-26  Score=156.53  Aligned_cols=106  Identities=24%  Similarity=0.276  Sum_probs=94.4

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      |.+++|+++||||++|||++++++|+++|++|++++|+++.+++..+++     .+..+.+|++++++++++++++.+++
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~   75 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAHL   75 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHhc
Confidence            4579999999999999999999999999999999999998887776644     35678999999999999999999999


Q ss_pred             CCcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                       |++|+||||||+..           |++.+++|+.|+|+++|
T Consensus        76 -g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~  117 (242)
T d1ulsa_          76 -GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAK  117 (242)
T ss_dssp             -SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhh
Confidence             89999999999976           35778999999988764

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=2.4e-26  Score=155.62  Aligned_cols=107  Identities=27%  Similarity=0.364  Sum_probs=97.2

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      +++||+++||||++|||++++++|+++|++|++++|+++.++++.+++   +.++..+.+|++++++++++++++.+++ 
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   76 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL---GANGKGLMLNVTDPASIESVLEKIRAEF-   76 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHT-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCCcEEEEEecCHHHhhhhhhhhhccc-
Confidence            478999999999999999999999999999999999998888887776   4467788999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      |++|+||||||....           ++.+++|+.|+|+++|
T Consensus        77 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~  118 (243)
T d1q7ba_          77 GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSK  118 (243)
T ss_dssp             CSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCcceehhhhhhccccccccccccccccccceeechhhhhHH
Confidence            999999999999773           5778999999998764

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.93  E-value=1.8e-26  Score=157.24  Aligned_cols=107  Identities=21%  Similarity=0.342  Sum_probs=96.8

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      +++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++.+|++++++++++++++.+++ 
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   77 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEF-   77 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEcccCCHHHHHHHHHHHHHHc-
Confidence            578999999999999999999999999999999999998877766554   6778999999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      |++|+||||||+...           ++.+++|+.|+|+++|
T Consensus        78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~  119 (254)
T d1hdca_          78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMK  119 (254)
T ss_dssp             SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCccEEEecCccccccccccccccccchhhhHHhhHHHHHHH
Confidence            899999999999773           5678999999988764

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.93  E-value=2.6e-26  Score=155.58  Aligned_cols=107  Identities=29%  Similarity=0.315  Sum_probs=97.2

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .++||+++||||++|||+++|++|+++|++|++++|++++++++.+++   +.++.++.+|++++++++++++++.+++ 
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   78 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL---ADAARYVHLDVTQPAQWKAAVDTAVTAF-   78 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---GGGEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---hCcceEEEeecCCHHHHHHHHHHHHHHh-
Confidence            378999999999999999999999999999999999998888777776   4568889999999999999999999999 


Q ss_pred             CcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                      |++|+||||||+..           |++.+++|+.|+|+++|
T Consensus        79 g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~  120 (244)
T d1nffa_          79 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIR  120 (244)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHH
Confidence            89999999999976           35779999999998764

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.93  E-value=4.9e-26  Score=155.94  Aligned_cols=109  Identities=21%  Similarity=0.313  Sum_probs=97.8

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+++|++|||||++|||+++|++|+++|++|++++|+++.+++..+++...+ .+.++.+|++|+++++++++++.+++ 
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~-   80 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISFVHCDVTKDEDVRNLVDTTIAKH-   80 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTT-TEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCC-ceEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            3789999999999999999999999999999999999999998888886544 57788999999999999999999999 


Q ss_pred             CcccEEEecCCCCC-------------ccceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPY-------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~-------------~~~~~~~n~~g~~~~~~  120 (120)
                      |++|+||||||+..             |++.+++|+.|+|+++|
T Consensus        81 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~  124 (268)
T d2bgka1          81 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAK  124 (268)
T ss_dssp             SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhh
Confidence            99999999999854             24568999999988764

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=4.2e-26  Score=155.25  Aligned_cols=108  Identities=26%  Similarity=0.305  Sum_probs=99.0

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++.+|++++++++++++++.+++
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            47999999999999999999999999999999999999999888888764  5789999999999999999999999999


Q ss_pred             CCcccEEEecCCCCCc---cceeeeeccceeccc
Q 033396           89 DGKLNILVSSAQLPYS---QRKFFVKSRGPYGSI  119 (120)
Q Consensus        89 ~g~id~li~~ag~~~~---~~~~~~n~~g~~~~~  119 (120)
                       |++|+||||||+..+   ++.+++|+.++++++
T Consensus        81 -G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~  113 (254)
T d2gdza1          81 -GRLDILVNNAGVNNEKNWEKTLQINLVSVISGT  113 (254)
T ss_dssp             -SCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHH
T ss_pred             -CCcCeecccccccccccchheeeeehhhHHHHH
Confidence             899999999999874   677899999888764

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.93  E-value=4.2e-26  Score=155.95  Aligned_cols=109  Identities=26%  Similarity=0.361  Sum_probs=97.5

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcC---CeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG---LQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +++|+++||||++|||+++|++|+++|++|++++|+.+.++++.+++...+   .++..+.+|++++++++++++++.++
T Consensus         3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (264)
T d1spxa_           3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   82 (264)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999999999999887653   46999999999999999999999999


Q ss_pred             cCCcccEEEecCCCCC---------------ccceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPY---------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~---------------~~~~~~~n~~g~~~~~~  120 (120)
                      + |++|+||||||+..               |++.+++|+.|+|+++|
T Consensus        83 ~-g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~  129 (264)
T d1spxa_          83 F-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTK  129 (264)
T ss_dssp             H-SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHH
T ss_pred             h-CCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHh
Confidence            9 99999999999853               35678999999998764

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.93  E-value=4.7e-26  Score=154.52  Aligned_cols=107  Identities=26%  Similarity=0.340  Sum_probs=94.7

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      +++|+++||||++|||+++|++|+++|++|++++|++.+.  ..+.++..+.++..+.+|++|+++++++++++.+++ |
T Consensus         3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~--~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~-G   79 (247)
T d2ew8a1           3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPE--AEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF-G   79 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHH--HHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH--HHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc-C
Confidence            7899999999999999999999999999999999976432  233455668899999999999999999999999999 9


Q ss_pred             cccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           91 KLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        91 ~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                      ++|+||||||+..           |++.+++|+.|+|+++|
T Consensus        80 ~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~  120 (247)
T d2ew8a1          80 RCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAK  120 (247)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHH
Confidence            9999999999977           35778999999998764

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=6.9e-26  Score=157.32  Aligned_cols=110  Identities=28%  Similarity=0.441  Sum_probs=100.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh-----cCCeEEEEeccCCCHHHHHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-----KGLQVSGNACDLKIRAQREKLMETV   84 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~   84 (120)
                      .++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++..     .+.++..+.+|++|+++++++++++
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            48999999999999999999999999999999999999998888888864     2678999999999999999999999


Q ss_pred             HhhcCCcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           85 SSQFDGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        85 ~~~~~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                      .+.+ |++|+||||||...           |++.+++|+.|+|+++|
T Consensus        89 ~~~~-G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~  134 (297)
T d1yxma1          89 LDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCK  134 (297)
T ss_dssp             HHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHh-CCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHH
Confidence            9999 89999999999876           35778999999998764

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.92  E-value=5e-26  Score=156.19  Aligned_cols=109  Identities=22%  Similarity=0.336  Sum_probs=99.1

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcC---CeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG---LQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +++|+++||||++|||+++|++|+++|++|++++|+++.++++.+++...+   .++..+.+|++++++++++++++.++
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~   82 (272)
T d1xkqa_           3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   82 (272)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            789999999999999999999999999999999999999999999887653   57999999999999999999999999


Q ss_pred             cCCcccEEEecCCCCC---------------ccceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPY---------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~---------------~~~~~~~n~~g~~~~~~  120 (120)
                      + |++|+||||||...               |.+.+++|+.|+++++|
T Consensus        83 ~-g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~  129 (272)
T d1xkqa_          83 F-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTK  129 (272)
T ss_dssp             H-SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             h-CCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHH
Confidence            9 99999999999865               24567899999988764

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=4.6e-26  Score=156.43  Aligned_cols=106  Identities=25%  Similarity=0.372  Sum_probs=97.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      +++|||||++|||+++|++|+++ |++|++++|+.+.+++..++++..+.++.++.+|++|.++++++++++.+++ |+|
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~-g~i   82 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-GGL   82 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-SSE
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhc-CCc
Confidence            46799999999999999999986 8999999999999999999999888899999999999999999999999999 899


Q ss_pred             cEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           93 NILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        93 d~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      |+||||||+...           ++.+++|+.|+++++|
T Consensus        83 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  121 (275)
T d1wmaa1          83 DVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCT  121 (275)
T ss_dssp             EEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHH
T ss_pred             EEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999763           4568999999998764

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.92  E-value=1.1e-25  Score=154.67  Aligned_cols=109  Identities=25%  Similarity=0.399  Sum_probs=98.9

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcC---CeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG---LQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      ++||+++||||++|||+++|++|+++|++|++++|+.+.+++..+++...+   .++..+.+|++++++++++++++.++
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999999999999887753   47899999999999999999999999


Q ss_pred             cCCcccEEEecCCCCC-------------ccceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPY-------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~-------------~~~~~~~n~~g~~~~~~  120 (120)
                      + |++|+||||||...             |++.+++|+.|+|+++|
T Consensus        82 ~-G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~  126 (274)
T d1xhla_          82 F-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQ  126 (274)
T ss_dssp             H-SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             c-CCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccc
Confidence            9 99999999999754             35678999999988754

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.2e-25  Score=152.76  Aligned_cols=106  Identities=25%  Similarity=0.352  Sum_probs=94.5

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .++||+++||||++|||++++++|+++|++|++++|+++.++++.+++    ..+.++.+|++|+++++++++++.+++ 
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~----~~~~~~~~Dvs~~~~v~~~~~~~~~~~-   77 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIRRF-   77 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CCCeEEEccCCCHHHHHHHHHHHHHhc-
Confidence            378999999999999999999999999999999999988877666554    457889999999999999999999999 


Q ss_pred             CcccEEEecCCCCC------------ccceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPY------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~------------~~~~~~~n~~g~~~~~~  120 (120)
                      |++|+||||||+..            |++.+++|+.|+|+++|
T Consensus        78 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~  120 (250)
T d1ydea1          78 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTK  120 (250)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHH
Confidence            99999999999754            35778999999998764

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.92  E-value=9.6e-26  Score=152.42  Aligned_cols=106  Identities=22%  Similarity=0.302  Sum_probs=98.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCE-------EEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAI-------VHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~-------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      +++|||||++|||+++|++|+++|++       |++++|+.+.++++.++++..+.++..+.+|++|+++++++++++.+
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999987       99999999999999999998899999999999999999999999999


Q ss_pred             hcCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           87 QFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      ++ |++|+||||||+..+           ++.+++|+.|+|+++|
T Consensus        82 ~~-g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~  125 (240)
T d2bd0a1          82 RY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQ  125 (240)
T ss_dssp             HT-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             Hc-CCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHH
Confidence            99 999999999999773           5779999999998764

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.92  E-value=1.2e-25  Score=152.98  Aligned_cols=107  Identities=30%  Similarity=0.358  Sum_probs=97.5

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+++|+++||||++|||++++++|+++|++|++++|+++.++++.+++   +.+..++.+|++++++++++++++.+++ 
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-   78 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL-   78 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEeecCCHHHHHHHHHHHHHHh-
Confidence            378999999999999999999999999999999999998888877776   6678899999999999999999999999 


Q ss_pred             CcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                      |++|+||||||+..           |++.+++|+.|+|+++|
T Consensus        79 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~  120 (253)
T d1hxha_          79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQ  120 (253)
T ss_dssp             CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHH
Confidence            99999999999976           35778999999998764

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.92  E-value=1.3e-25  Score=154.49  Aligned_cols=108  Identities=25%  Similarity=0.413  Sum_probs=96.5

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      |.++||+++||||++|||+++|++|+++|++|++++|+.+.+++..+++   +.++..+.+|++++++++++++++.+++
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   77 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH---GDNVLGIVGDVRSLEDQKQAASRCVARF   77 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeeEEecccccHHHHHHHHHHHHHHh
Confidence            4579999999999999999999999999999999999988887766654   6688999999999999999999999999


Q ss_pred             CCcccEEEecCCCCC----------------ccceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPY----------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~----------------~~~~~~~n~~g~~~~~~  120 (120)
                       |++|++|||||+..                |++.+++|+.|+|+++|
T Consensus        78 -g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~  124 (276)
T d1bdba_          78 -GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVK  124 (276)
T ss_dssp             -SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHH
T ss_pred             -CCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHH
Confidence             99999999999754                34668999999998764

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.91  E-value=3.8e-25  Score=149.78  Aligned_cols=106  Identities=21%  Similarity=0.278  Sum_probs=96.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEee-CChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCS-RNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      +++|||||++|||++++++|+++|++|++.+ |+.+.++++.++++..+.++.++.+|++|+++++++++++.+++ |++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   80 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW-GTI   80 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS-SCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHc-CCC
Confidence            5899999999999999999999999999875 56667888888888888999999999999999999999999999 999


Q ss_pred             cEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           93 NILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        93 d~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                      |+||||||...           |++.+++|+.|+|+++|
T Consensus        81 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~  119 (244)
T d1edoa_          81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQ  119 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CccccccccccccchhccchHHHHHHHhhhhhhHHHHHH
Confidence            99999999977           36779999999998764

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.91  E-value=5.1e-25  Score=150.10  Aligned_cols=111  Identities=25%  Similarity=0.349  Sum_probs=98.9

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .++.||++|||||++|||++++++|+++|++|+++++ +...+++..++++..+.++..+.+|++|+++++++++++.++
T Consensus         2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (259)
T d1ja9a_           2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   81 (259)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHH
Confidence            3588999999999999999999999999999998754 556678888888888999999999999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           88 FDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      + |++|+||||||...+           ++.+++|+.++++++|
T Consensus        82 ~-g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  124 (259)
T d1ja9a_          82 F-GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQ  124 (259)
T ss_dssp             H-SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             c-CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehh
Confidence            9 899999999999773           4668899998887754

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.91  E-value=1.1e-24  Score=149.26  Aligned_cols=113  Identities=26%  Similarity=0.366  Sum_probs=100.7

Q ss_pred             ccccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHH
Q 033396            7 KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus         7 ~~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      .+.+++||++|||||++|||++++++|+++|++|++++++. +.++++.++++..+.++..+.+|+++++++.++++++.
T Consensus        12 ~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~   91 (272)
T d1g0oa_          12 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAV   91 (272)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHH
Confidence            34569999999999999999999999999999999998864 55778888888889999999999999999999999999


Q ss_pred             hhcCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           86 SQFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      +.+ |++|++|||+|....           .+.+++|+.+++.++|
T Consensus        92 ~~~-g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~  136 (272)
T d1g0oa_          92 KIF-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAR  136 (272)
T ss_dssp             HHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHh-CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecc
Confidence            999 899999999999773           4667889888887653

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.91  E-value=8.5e-25  Score=148.37  Aligned_cols=103  Identities=26%  Similarity=0.406  Sum_probs=89.4

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      ++||++||||+++|||++++++|+++|++|++++|+++..+ ..+++   +  ..++++|++|+++++++++++.+++ |
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~---~--~~~~~~Dv~~~~~v~~~~~~~~~~~-G   75 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI---G--GAFFQVDLEDERERVRFVEEAAYAL-G   75 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH---T--CEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc---C--CeEEEEeCCCHHHHHHHHHHHHHhc-C
Confidence            68999999999999999999999999999999999876533 33333   3  3467899999999999999999999 9


Q ss_pred             cccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           91 KLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        91 ~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      +||+||||||+..+           ++.+++|+.|+|+++|
T Consensus        76 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~  116 (248)
T d2d1ya1          76 RVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSA  116 (248)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhh
Confidence            99999999999763           5678999999998764

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.91  E-value=6e-25  Score=148.52  Aligned_cols=106  Identities=25%  Similarity=0.319  Sum_probs=94.1

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      ++||+++||||++|||+++|++|+++|++|++++|+.+.+++..+   +.+.++.++++|++++++++++++++.+.+ |
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~-g   78 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVA---ALEAEAIAVVADVSDPKAVEAVFAEALEEF-G   78 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---TCCSSEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---HcCCceEEEEecCCCHHHHHHHHHHHHHHh-C
Confidence            689999999999999999999999999999999999887765554   447789999999999999999999999999 9


Q ss_pred             cccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           91 KLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        91 ~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      ++|+||||||....           .+.+++|+.++++++|
T Consensus        79 ~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k  119 (241)
T d2a4ka1          79 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVAR  119 (241)
T ss_dssp             CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHH
T ss_pred             CccEeccccccccccchhhhhcccccccccccccccccccc
Confidence            99999999998763           5667888888887653

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.91  E-value=9.7e-25  Score=148.52  Aligned_cols=111  Identities=14%  Similarity=0.159  Sum_probs=93.9

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh-cCCeEEEEeccCC-CHHHHHHHHHHHHh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KGLQVSGNACDLK-IRAQREKLMETVSS   86 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~-~~~~~~~~~~~~~~   86 (120)
                      |++++|++|||||++|||.++|++|+++|++|++++|+.++.+...+.... .+.++.++.+|++ +.++++++++++.+
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999998876555444333333 3568999999998 56789999999999


Q ss_pred             hcCCcccEEEecCCCCC---ccceeeeeccceecccC
Q 033396           87 QFDGKLNILVSSAQLPY---SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~---~~~~~~~n~~g~~~~~~  120 (120)
                      .+ |+||+||||||...   |++.+++|+.|+++++|
T Consensus        81 ~~-g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~  116 (254)
T d1sbya1          81 QL-KTVDILINGAGILDDHQIERTIAINFTGLVNTTT  116 (254)
T ss_dssp             HH-SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHH
T ss_pred             Hc-CCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHH
Confidence            99 89999999999977   46789999999998764

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.90  E-value=1.5e-24  Score=146.60  Aligned_cols=103  Identities=31%  Similarity=0.417  Sum_probs=87.9

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      |+++||++|||||++|||++++++|+++|++|++++|+++.++++.+++    ..+..+.+|++|++++++++    +++
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~----~~~~~~~~Dv~~~~~v~~~~----~~~   72 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKAL----GGI   72 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHH----TTC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CCCeEEEEeCCCHHHHHHHH----HHc
Confidence            4689999999999999999999999999999999999998887776654    34677899999999877665    456


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                       |++|+||||||+...           ++.+++|+.|+++++|
T Consensus        73 -g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~  114 (242)
T d1cyda_          73 -GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQ  114 (242)
T ss_dssp             -CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             -CCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHH
Confidence             899999999999763           5668999999887754

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.90  E-value=1.4e-24  Score=146.50  Aligned_cols=100  Identities=25%  Similarity=0.340  Sum_probs=89.3

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.           ...+..+.+|++|+++++++++++.+++
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   71 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA-----------PKGLFGVEVDVTDSDAVDRAFTAVEEHQ   71 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC-----------CTTSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch-----------hcCceEEEEecCCHHHHHHHHHHHHHhc
Confidence            35899999999999999999999999999999999998644           2356788999999999999999999999


Q ss_pred             CCcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                       |++|+||||||+..           |++.+++|+.++++++|
T Consensus        72 -g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~  113 (237)
T d1uzma1          72 -GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQ  113 (237)
T ss_dssp             -SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             -CCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhh
Confidence             89999999999976           36778999999988754

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=3.5e-24  Score=144.96  Aligned_cols=103  Identities=30%  Similarity=0.400  Sum_probs=88.2

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +.++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++    ..+..+.+|++|++++++++    +++
T Consensus         3 ~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~----~~~~~~~~Dv~d~~~v~~~~----~~~   74 (244)
T d1pr9a_           3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC----PGIEPVCVDLGDWEATERAL----GSV   74 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHH----TTC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc----CCCeEEEEeCCCHHHHHHHH----HHh
Confidence            4589999999999999999999999999999999999998887776664    24678889999999877666    456


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                       |++|+||||||+...           ++.+++|+.++++++|
T Consensus        75 -g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~  116 (244)
T d1pr9a_          75 -GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQ  116 (244)
T ss_dssp             -CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             -CCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHH
Confidence             899999999999773           5668999999887653

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.89  E-value=2.5e-23  Score=143.61  Aligned_cols=95  Identities=24%  Similarity=0.368  Sum_probs=88.2

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh-cCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      ++++||++|||||++|||+++|++|+++|++|++++|+...+++..+++.. .+..+..+.+|++++++++++++.+.+.
T Consensus        21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~  100 (294)
T d1w6ua_          21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  100 (294)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence            469999999999999999999999999999999999999998888887765 4788999999999999999999999999


Q ss_pred             cCCcccEEEecCCCCCc
Q 033396           88 FDGKLNILVSSAQLPYS  104 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~  104 (120)
                      + +++|+||||+|...+
T Consensus       101 ~-g~iDilvnnAg~~~~  116 (294)
T d1w6ua_         101 A-GHPNIVINNAAGNFI  116 (294)
T ss_dssp             T-CSCSEEEECCCCCCC
T ss_pred             c-cccchhhhhhhhccc
Confidence            9 999999999998774

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.89  E-value=1.2e-23  Score=142.85  Aligned_cols=109  Identities=21%  Similarity=0.191  Sum_probs=91.0

Q ss_pred             ccccCcEEEEecCCC--chHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396            9 WSLKGMTALVTGGTK--GIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus         9 ~~~~~~~~litGa~~--~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      .+++||+++||||++  |||+++|++|+++|++|++++|++...++. +++...++....+.+|++++++++++++++.+
T Consensus         4 ~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (256)
T d1ulua_           4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEA-EKLAEALGGALLFRADVTQDEELDALFAGVKE   82 (256)
T ss_dssp             ECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHHHHTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHH-HHhhhccCcccccccccCCHHHHHHHHHHHHH
Confidence            468999999999986  899999999999999999999986554433 33444455677899999999999999999999


Q ss_pred             hcCCcccEEEecCCCCC---------------ccceeeeeccceeccc
Q 033396           87 QFDGKLNILVSSAQLPY---------------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~---------------~~~~~~~n~~g~~~~~  119 (120)
                      ++ |++|+||||||+..               |...+++|+.+++.++
T Consensus        83 ~~-g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~  129 (256)
T d1ulua_          83 AF-GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVA  129 (256)
T ss_dssp             HH-SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             hc-CCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHH
Confidence            99 99999999999864               2345788888887765

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.89  E-value=1.4e-23  Score=145.95  Aligned_cols=109  Identities=23%  Similarity=0.339  Sum_probs=92.8

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC---------hHHHHHHHHHHHhcCCeEEEEeccCCCHHHHH
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN---------ETELNQRIQEWKSKGLQVSGNACDLKIRAQRE   78 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   78 (120)
                      +|.++||++|||||++|||+++|++|+++|++|++.+++         ...+++..+++...+..   ..+|+++.++++
T Consensus         2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~d~~~~~~~~   78 (302)
T d1gz6a_           2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK---AVANYDSVEAGE   78 (302)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCE---EEEECCCGGGHH
T ss_pred             CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccc---cccccchHHHHH
Confidence            566899999999999999999999999999999998764         34566667777665543   457888889999


Q ss_pred             HHHHHHHhhcCCcccEEEecCCCCC-----------ccceeeeeccceecccC
Q 033396           79 KLMETVSSQFDGKLNILVSSAQLPY-----------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        79 ~~~~~~~~~~~g~id~li~~ag~~~-----------~~~~~~~n~~g~~~~~~  120 (120)
                      ++++++.+++ |+||+||||||+..           |++.+++|+.|+|+++|
T Consensus        79 ~~v~~~~~~~-G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~  130 (302)
T d1gz6a_          79 KLVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTR  130 (302)
T ss_dssp             HHHHHHHHHT-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHc-CCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHH
Confidence            9999999999 99999999999977           36778999999998764

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=3.7e-23  Score=140.72  Aligned_cols=111  Identities=22%  Similarity=0.246  Sum_probs=96.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHH---CCCEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCHHHHHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAA---FGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIRAQREKLMETV   84 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~---~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   84 (120)
                      .++||+++||||++|||+++|++|++   +|++|++++|+.+.++++.+++...  +.++..+.+|++++++++++++++
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            37899999999999999999999986   7899999999999999999988764  568999999999999999999988


Q ss_pred             Hhh---cCCcccEEEecCCCCC--------------ccceeeeeccceecccC
Q 033396           85 SSQ---FDGKLNILVSSAQLPY--------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        85 ~~~---~~g~id~li~~ag~~~--------------~~~~~~~n~~g~~~~~~  120 (120)
                      .+.   .++.+|++|||+|...              |++.+++|+.|+++++|
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~  135 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTS  135 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHH
Confidence            763   2267999999999754              24678999999988764

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.88  E-value=9.6e-24  Score=143.00  Aligned_cols=107  Identities=16%  Similarity=0.198  Sum_probs=89.7

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      |++|++|||||++|||++++++|+++|+  +|++++|+.+.++++.+   ..+.++.++.+|++++++++++++++.+.+
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~---~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   77 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS---IKDSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT---CCCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH---hhCCceEEEEEecCCHHHHHHHHHHHHHHh
Confidence            4579999999999999999999999996  68889999877655432   236789999999999999999999999887


Q ss_pred             C-CcccEEEecCCCCCc------------cceeeeeccceecccC
Q 033396           89 D-GKLNILVSSAQLPYS------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~-g~id~li~~ag~~~~------------~~~~~~n~~g~~~~~~  120 (120)
                      + .++|+||||||+...            ++.+++|+.|+++++|
T Consensus        78 ~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  122 (250)
T d1yo6a1          78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQ  122 (250)
T ss_dssp             GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHH
Confidence            2 249999999998542            4678999999988763

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.3e-22  Score=138.81  Aligned_cols=109  Identities=21%  Similarity=0.235  Sum_probs=98.6

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh-cCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++||+++||||++|||+++|++|+++|++|++++|+.+.+++..+++.. .+..+..+.+|+++...+..+.+++.+.+ 
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-   90 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM-   90 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh-
Confidence            8999999999999999999999999999999999999999988887765 47889999999999999999999999999 


Q ss_pred             CcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      |.+|+++||+|....           .+.+++|+.|++.++|
T Consensus        91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~  132 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTV  132 (269)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHH
Confidence            899999999998763           4568899999887653

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.87  E-value=2.1e-23  Score=141.15  Aligned_cols=105  Identities=18%  Similarity=0.204  Sum_probs=88.8

Q ss_pred             cEEEEecCCCchHHHHHHHHH---HCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHh--hc
Q 033396           14 MTALVTGGTKGIGYAVVEELA---AFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSS--QF   88 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~---~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~   88 (120)
                      |++|||||++|||+++|++|+   ++|++|++++|+++.++++.+ +...+.++.++.+|++|+++++++++++.+  .+
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            689999999999999999996   478999999999887766543 444567899999999999999999998854  56


Q ss_pred             CCcccEEEecCCCCCc------------cceeeeeccceecccC
Q 033396           89 DGKLNILVSSAQLPYS------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        89 ~g~id~li~~ag~~~~------------~~~~~~n~~g~~~~~~  120 (120)
                       +++|+||||||+...            ++.+++|+.|+++++|
T Consensus        82 -~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  124 (248)
T d1snya_          82 -QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAK  124 (248)
T ss_dssp             -GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             -CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHH
Confidence             899999999998652            4568999999988764

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=2.6e-21  Score=133.27  Aligned_cols=105  Identities=19%  Similarity=0.201  Sum_probs=85.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEe---eCChH---HHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTC---SRNET---ELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      .|++|||||++|||+++|++|+++|++|+.+   .++..   .+.+..+++...+.++..+.+|++|++++.++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            5789999999999999999999999875544   55543   34445555555688999999999999999999987644


Q ss_pred             hcCCcccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           87 QFDGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                         |.+|+||||+|....           .+.+++|+.|+++++|
T Consensus        82 ---g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~  123 (285)
T d1jtva_          82 ---GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQ  123 (285)
T ss_dssp             ---SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ---cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHH
Confidence               789999999999773           5678999999988764

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.82  E-value=1.8e-21  Score=132.01  Aligned_cols=99  Identities=17%  Similarity=0.158  Sum_probs=83.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   94 (120)
                      ++|||||++|||+++|++|+++|++|++++|+.+.++++......      +..+|++++++++++++++.+++ |+||+
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~------~~~~dv~~~~~~~~~~~~~~~~~-G~iDi   74 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET------YPQLKPMSEQEPAELIEAVTSAY-GQVDV   74 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH------CTTSEECCCCSHHHHHHHHHHHH-SCCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCc------EEEeccCCHHHHHHHHHHHHHHc-CCCCE
Confidence            799999999999999999999999999999987776555433222      23589999999999999999999 99999


Q ss_pred             EEecCCCCC------------ccceeeeeccceecccC
Q 033396           95 LVSSAQLPY------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        95 li~~ag~~~------------~~~~~~~n~~g~~~~~~  120 (120)
                      ||||||+..            |++.+++|+.++|+++|
T Consensus        75 LVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~  112 (252)
T d1zmta1          75 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVN  112 (252)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             EEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999754            24667899999988764

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.81  E-value=8.6e-21  Score=127.35  Aligned_cols=94  Identities=27%  Similarity=0.365  Sum_probs=76.0

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      +++|++|||||++|||++++++|+++|++|++++|+++.++       +.+.  .++.+|+++.      ++++.+++ |
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~-------~~~~--~~~~~Dv~~~------~~~~~~~~-g   65 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK-------RSGH--RYVVCDLRKD------LDLLFEKV-K   65 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-------HTCS--EEEECCTTTC------HHHHHHHS-C
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-------hcCC--cEEEcchHHH------HHHHHHHh-C
Confidence            58999999999999999999999999999999999975543       2233  3567999863      34455667 8


Q ss_pred             cccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           91 KLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        91 ~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      ++|+||||||+...           ++.+++|+.++++++|
T Consensus        66 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  106 (234)
T d1o5ia_          66 EVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVR  106 (234)
T ss_dssp             CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhh
Confidence            99999999998763           5668899999887754

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.80  E-value=6.6e-20  Score=125.28  Aligned_cols=90  Identities=22%  Similarity=0.285  Sum_probs=75.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHHhc-CCeEEEE-----------------eccCCCH
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN-ETELNQRIQEWKSK-GLQVSGN-----------------ACDLKIR   74 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~-~~~~~~~-----------------~~D~~~~   74 (120)
                      .++|||||++|||+++|++|+++|++|++++++ .+..+++.+++... +.....+                 .+|++++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            378999999999999999999999999998765 45567777777653 4444444                 4569999


Q ss_pred             HHHHHHHHHHHhhcCCcccEEEecCCCCCc
Q 033396           75 AQREKLMETVSSQFDGKLNILVSSAQLPYS  104 (120)
Q Consensus        75 ~~~~~~~~~~~~~~~g~id~li~~ag~~~~  104 (120)
                      ++++++++++.+++ |++|+||||||+..+
T Consensus        83 ~~v~~~~~~~~~~~-G~iDiLVnnAG~~~~  111 (284)
T d1e7wa_          83 TRCAELVAACYTHW-GRCDVLVNNASSFYP  111 (284)
T ss_dssp             HHHHHHHHHHHHHH-SCCCEEEECCCCCCC
T ss_pred             HHHHHHHHHHHHHh-CCCCEEEecCCccCC
Confidence            99999999999999 999999999999763

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.80  E-value=8.9e-20  Score=118.99  Aligned_cols=102  Identities=21%  Similarity=0.222  Sum_probs=84.1

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      ..++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++.... .+....+|+++.+++.+++      
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~------   90 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-KVNVTAAETADDASRAEAV------   90 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-TCCCEEEECCSHHHHHHHT------
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc-chhhhhhhcccHHHHHHHh------
Confidence            457899999999999999999999999999999999999999888888876642 2345778999999888776      


Q ss_pred             cCCcccEEEecCCCCC-------ccceeeeeccceecc
Q 033396           88 FDGKLNILVSSAQLPY-------SQRKFFVKSRGPYGS  118 (120)
Q Consensus        88 ~~g~id~li~~ag~~~-------~~~~~~~n~~g~~~~  118 (120)
                        +++|+||||+|+..       |...+++|+.+.++.
T Consensus        91 --~~iDilin~Ag~g~~~~~~e~~~~~~~~nv~~~~~~  126 (191)
T d1luaa1          91 --KGAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNA  126 (191)
T ss_dssp             --TTCSEEEECCCTTCCCBCHHHHHTCTTCCEEEECCC
T ss_pred             --cCcCeeeecCccccccCCHHHHHhhhcceeehhHhh
Confidence              78999999999754       345566666665544

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2.3e-20  Score=126.07  Aligned_cols=100  Identities=22%  Similarity=0.289  Sum_probs=81.4

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      ++||++|||||++|||++++++|+++|++|++++|+++.++++.+     ...+....+|+.+.+.++..    .+.+ +
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~-----~~~~~~~~~d~~~~~~~~~~----~~~~-~   73 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-----YPGIQTRVLDVTKKKQIDQF----ANEV-E   73 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG-----STTEEEEECCTTCHHHHHHH----HHHC-S
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-----ccCCceeeeecccccccccc----cccc-c
Confidence            899999999999999999999999999999999999876654322     33467788899887655544    4455 8


Q ss_pred             cccEEEecCCCCCc-----------cceeeeeccceecccC
Q 033396           91 KLNILVSSAQLPYS-----------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        91 ~id~li~~ag~~~~-----------~~~~~~n~~g~~~~~~  120 (120)
                      ++|+||||+|....           ++.+++|+.++++++|
T Consensus        74 ~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~  114 (245)
T d2ag5a1          74 RLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIK  114 (245)
T ss_dssp             CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHH
Confidence            99999999999873           5668889988887653

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.2e-19  Score=122.28  Aligned_cols=107  Identities=23%  Similarity=0.370  Sum_probs=93.5

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++   +.......+|+.+...++....++...+ 
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   77 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKF-   77 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCCccccccccccccccccccccccccc-
Confidence            589999999999999999999999999999999999988887777665   5677888999999999999999998888 


Q ss_pred             CcccEEEecCCCCC-----------------ccceeeeeccceecccC
Q 033396           90 GKLNILVSSAQLPY-----------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        90 g~id~li~~ag~~~-----------------~~~~~~~n~~g~~~~~~  120 (120)
                      +.+|.+++|+++..                 |++.+++|+.|+|+++|
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~  125 (248)
T d2o23a1          78 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIR  125 (248)
T ss_dssp             SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHH
Confidence            88999999987754                 24668899999887653

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.79  E-value=6.8e-20  Score=124.16  Aligned_cols=104  Identities=26%  Similarity=0.295  Sum_probs=87.6

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCCh---HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE---TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ++++|||||++|||++++++|+++|+ +|++++|+.   +..++..++++..+.++.++.+|++|++++.++++++.+. 
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~-   87 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD-   87 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT-
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc-
Confidence            45999999999999999999999998 588898864   3466777788888999999999999999999999887664 


Q ss_pred             CCcccEEEecCCCCCc-----------cceeeeeccceecc
Q 033396           89 DGKLNILVSSAQLPYS-----------QRKFFVKSRGPYGS  118 (120)
Q Consensus        89 ~g~id~li~~ag~~~~-----------~~~~~~n~~g~~~~  118 (120)
                       +++|++|||+|+...           ...+++|+.|++++
T Consensus        88 -~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l  127 (259)
T d2fr1a1          88 -VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNL  127 (259)
T ss_dssp             -SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHH
T ss_pred             -ccccccccccccccccccccccHHHHHHHhhhhccchhHH
Confidence             589999999999884           34467777776654

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.77  E-value=1.3e-18  Score=118.43  Aligned_cols=92  Identities=22%  Similarity=0.293  Sum_probs=80.3

Q ss_pred             cccCcEEEEecCCC--chHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           10 SLKGMTALVTGGTK--GIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        10 ~~~~~~~litGa~~--~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .++||++|||||++  |||+++|++|+++|++|++++|++. +++..+++...+....++.+|+++++++.++++++.+.
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD   80 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHH
Confidence            37899999999765  8999999999999999999999854 33445556666677788899999999999999999999


Q ss_pred             cCCcccEEEecCCCCC
Q 033396           88 FDGKLNILVSSAQLPY  103 (120)
Q Consensus        88 ~~g~id~li~~ag~~~  103 (120)
                      + |++|++|||+|+..
T Consensus        81 ~-g~id~lV~nag~~~   95 (274)
T d2pd4a1          81 L-GSLDFIVHSVAFAP   95 (274)
T ss_dssp             T-SCEEEEEECCCCCC
T ss_pred             c-CCCCeEEeeccccc
Confidence            9 99999999999876

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.75  E-value=9.1e-19  Score=120.29  Aligned_cols=112  Identities=22%  Similarity=0.160  Sum_probs=80.3

Q ss_pred             ccccccCcEEEEecCCC--chHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc---------C---CeEEEEecc--
Q 033396            7 KRWSLKGMTALVTGGTK--GIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK---------G---LQVSGNACD--   70 (120)
Q Consensus         7 ~~~~~~~~~~litGa~~--~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~---------~---~~~~~~~~D--   70 (120)
                      ++++++||++|||||++  |||+++|++|+++|++|++++|+..............         +   ..-....+|  
T Consensus         2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (297)
T d1d7oa_           2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            46789999999999875  9999999999999999999999765432222211110         0   111222232  


Q ss_pred             ------------------CCCHHHHHHHHHHHHhhcCCcccEEEecCCCCC-------------ccceeeeeccceeccc
Q 033396           71 ------------------LKIRAQREKLMETVSSQFDGKLNILVSSAQLPY-------------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        71 ------------------~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~-------------~~~~~~~n~~g~~~~~  119 (120)
                                        .++...++++++++.+++ |++|+||||||...             |.+.+++|+.++++++
T Consensus        82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~-G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~  160 (297)
T d1d7oa_          82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDF-GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLL  160 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHH-SCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHh-CCCcccccccccccccccchhhhhcccccccccchhhhhhhhh
Confidence                              244456788999999999 99999999999853             2456788888887654

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.74  E-value=2e-17  Score=111.71  Aligned_cols=89  Identities=22%  Similarity=0.314  Sum_probs=74.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH-HHHHHHHHHhc-CCeEEEEeccCCC----HHHHHHHHHHHHhhc
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-LNQRIQEWKSK-GLQVSGNACDLKI----RAQREKLMETVSSQF   88 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~D~~~----~~~~~~~~~~~~~~~   88 (120)
                      ++|||||++|||+++|++|+++|++|++++|+.++ .+++.+++... +.....+.+|..+    ++.+.++++++.+++
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            78999999999999999999999999999998654 56677777654 5677777765543    466788888999999


Q ss_pred             CCcccEEEecCCCCCc
Q 033396           89 DGKLNILVSSAQLPYS  104 (120)
Q Consensus        89 ~g~id~li~~ag~~~~  104 (120)
                       |++|+||||||+..+
T Consensus        83 -g~iDilvnnAG~~~~   97 (266)
T d1mxha_          83 -GRCDVLVNNASAYYP   97 (266)
T ss_dssp             -SCCCEEEECCCCCCC
T ss_pred             -CCCCEEEECCccCCC
Confidence             899999999998774

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.70  E-value=4.1e-18  Score=114.19  Aligned_cols=98  Identities=15%  Similarity=0.055  Sum_probs=78.4

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC-C
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD-G   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-g   90 (120)
                      +||++|||||++|||++++++|+++|++|+++++.+.+          .......+.+|.++.++.+.+..++.+.++ +
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENE----------EASASVIVKMTDSFTEQADQVTAEVGKLLGDQ   70 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCT----------TSSEEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccc----------cccccceeecccCcHHHHHHHHHHHHHHhCCC
Confidence            58999999999999999999999999999999886533          123455667788888888888887777652 4


Q ss_pred             cccEEEecCCCCC------------ccceeeeeccceeccc
Q 033396           91 KLNILVSSAQLPY------------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        91 ~id~li~~ag~~~------------~~~~~~~n~~g~~~~~  119 (120)
                      ++|+||||||...            |++.+++|+.++++++
T Consensus        71 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  111 (236)
T d1dhra_          71 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISS  111 (236)
T ss_dssp             CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHH
Confidence            7999999999644            2456788888887664

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.69  E-value=1.3e-16  Score=107.95  Aligned_cols=92  Identities=21%  Similarity=0.183  Sum_probs=75.3

Q ss_pred             cccCcEEEEecC--CCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           10 SLKGMTALVTGG--TKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        10 ~~~~~~~litGa--~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .+++|++|||||  ++|||+++|++|+++|++|++++++..+..+...  +..+.+...+.+|++++++++++++.+.+.
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~--~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~   80 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT--DRLPAKAPLLELDVQNEEHLASLAGRVTEA   80 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH--TTSSSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHH--HHcCCceeeEeeecccccccccccchhhhc
Confidence            478999999995  5689999999999999999999998766533222  224667778899999999999999888765


Q ss_pred             cC--CcccEEEecCCCCC
Q 033396           88 FD--GKLNILVSSAQLPY  103 (120)
Q Consensus        88 ~~--g~id~li~~ag~~~  103 (120)
                      ++  +++|+++||+|+..
T Consensus        81 ~~~~~~ld~~i~~ag~~~   98 (268)
T d2h7ma1          81 IGAGNKLDGVVHSIGFMP   98 (268)
T ss_dssp             HCTTCCEEEEEECCCCCC
T ss_pred             cccCCCcceeeecccccC
Confidence            41  67999999999864

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.69  E-value=6e-18  Score=113.19  Aligned_cols=97  Identities=13%  Similarity=0.031  Sum_probs=75.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHh--hcCC
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSS--QFDG   90 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~~g   90 (120)
                      ++.++||||++|||++++++|++.|++|++++|++.+.          ......+.+|+.+.+......+.+.+  .+ +
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g   70 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ----------ADSNILVDGNKNWTEQEQSILEQTASSLQG-S   70 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT----------SSEEEECCTTSCHHHHHHHHHHHHHHHHTT-C
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc----------ccccceeccccCchhHHHHHHHHHHHHhcC-C
Confidence            45679999999999999999999999999999986431          23445667788888777766666655  34 8


Q ss_pred             cccEEEecCCCCCc------------cceeeeeccceecccC
Q 033396           91 KLNILVSSAQLPYS------------QRKFFVKSRGPYGSIH  120 (120)
Q Consensus        91 ~id~li~~ag~~~~------------~~~~~~n~~g~~~~~~  120 (120)
                      +||+||||||+...            +..+++|+.++++++|
T Consensus        71 ~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  112 (235)
T d1ooea_          71 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAK  112 (235)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhh
Confidence            99999999997542            3557888888877653

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.66  E-value=3.6e-16  Score=105.34  Aligned_cols=91  Identities=20%  Similarity=0.248  Sum_probs=78.1

Q ss_pred             ccCcEEEEecCCC--chHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           11 LKGMTALVTGGTK--GIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        11 ~~~~~~litGa~~--~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++|++|||||++  |||.++|+.|+++|++|++++|++...+.. +++....+....+..|+++..++...+.++.+.+
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   81 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence            6899999999998  899999999999999999999986544433 4444445566788899999999999999999999


Q ss_pred             CCcccEEEecCCCCC
Q 033396           89 DGKLNILVSSAQLPY  103 (120)
Q Consensus        89 ~g~id~li~~ag~~~  103 (120)
                       +++|++|||++...
T Consensus        82 -~~~d~~v~~a~~~~   95 (258)
T d1qsga_          82 -PKFDGFVHSIGFAP   95 (258)
T ss_dssp             -SSEEEEEECCCCCC
T ss_pred             -cccceEEEeecccc
Confidence             99999999998865

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.65  E-value=3.1e-17  Score=114.59  Aligned_cols=108  Identities=14%  Similarity=0.073  Sum_probs=79.6

Q ss_pred             cCcEEEEec--CCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc------------CCeEEEEe---------
Q 033396           12 KGMTALVTG--GTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK------------GLQVSGNA---------   68 (120)
Q Consensus        12 ~~~~~litG--a~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~---------   68 (120)
                      ++|++||||  +++|||+++|+.|+++|++|+++++.............+.            ........         
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            479999999  5579999999999999999999998765443333221111            11222333         


Q ss_pred             -----------ccCCCHHHHHHHHHHHHhhcCCcccEEEecCCCCC-------------ccceeeeeccceecccC
Q 033396           69 -----------CDLKIRAQREKLMETVSSQFDGKLNILVSSAQLPY-------------SQRKFFVKSRGPYGSIH  120 (120)
Q Consensus        69 -----------~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~-------------~~~~~~~n~~g~~~~~~  120 (120)
                                 +|+++.++++++++++.+.+ |+||+||||+|...             |.+.+++|+++++.++|
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k  155 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKY-GKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCK  155 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHH-CCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHh-CCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHH
Confidence                       36667788999999999999 99999999999754             24567888888776653

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.54  E-value=4.3e-15  Score=104.19  Aligned_cols=100  Identities=18%  Similarity=0.132  Sum_probs=72.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH-----HHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-----LNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .|.||||||+|.||..++++|++.|++|+.++|....     +............++.++.+|++|.+++.+++...   
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc---
Confidence            4789999999999999999999999999999985432     22222222233568899999999999999998763   


Q ss_pred             cCCcccEEEecCCCCCc-------cceeeeeccceecc
Q 033396           88 FDGKLNILVSSAQLPYS-------QRKFFVKSRGPYGS  118 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-------~~~~~~n~~g~~~~  118 (120)
                         .+|+++|+|+..+.       ...+++|+.|+.++
T Consensus        78 ---~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nl  112 (357)
T d1db3a_          78 ---QPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRL  112 (357)
T ss_dssp             ---CCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHH
T ss_pred             ---CCCEEEEeecccccchhhhCHHHHHHHHHHHHHHH
Confidence               68999999998652       34567888877665

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.49  E-value=7.9e-14  Score=93.41  Aligned_cols=74  Identities=23%  Similarity=0.258  Sum_probs=62.5

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      |++|||||++|||+++|++|+++|++|++++++..+                 ...|+.++........++.....+.+|
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-----------------~~~d~~~~~~~~~~~~~~~~~~~~~id   64 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-----------------VIADLSTAEGRKQAIADVLAKCSKGMD   64 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-----------------EECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-----------------HHHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence            689999999999999999999999999999987532                 246899888888777776666547899


Q ss_pred             EEEecCCCCCc
Q 033396           94 ILVSSAQLPYS  104 (120)
Q Consensus        94 ~li~~ag~~~~  104 (120)
                      +++||||+...
T Consensus        65 ~lv~~Ag~~~~   75 (257)
T d1fjha_          65 GLVLCAGLGPQ   75 (257)
T ss_dssp             EEEECCCCCTT
T ss_pred             EEEEcCCCCCc
Confidence            99999998663

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.49  E-value=1.2e-14  Score=100.94  Aligned_cols=99  Identities=17%  Similarity=0.121  Sum_probs=74.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHH-hcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK-SKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      .+|||||+|.||+.++++|++.|++|++++|............+ ....++.++++|++|.+.+.++++.      .++|
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~------~~~d   75 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD------HAID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH------TTCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhc------cCCC
Confidence            49999999999999999999999999999863221111111111 1245788999999999998888875      4789


Q ss_pred             EEEecCCCCCc-------cceeeeeccceeccc
Q 033396           94 ILVSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        94 ~li~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                      +|||.|+....       ...+++|+.|+.+++
T Consensus        76 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL  108 (338)
T d1udca_          76 TVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLI  108 (338)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCccchhhHHhCHHHHHHhHHHHHHHHH
Confidence            99999998652       355788888877654

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.45  E-value=4.4e-14  Score=97.14  Aligned_cols=98  Identities=11%  Similarity=0.025  Sum_probs=74.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      .+|||||+|.||++++++|+++|++|+.+++-. .........+. ...++.++.+|+++.+++.++++.      .++|
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~-~~~~~~~i~~Di~~~~~l~~~~~~------~~~d   74 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS-SLGNFEFVHGDIRNKNDVTRLITK------YMPD   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHH------HCCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhh-ccCCcEEEEcccCCHHHHHHHHHh------cCCc
Confidence            589999999999999999999999999987532 22222233332 245678899999999999888865      3689


Q ss_pred             EEEecCCCCCc-------cceeeeeccceeccc
Q 033396           94 ILVSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        94 ~li~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                      ++||+|+....       ...+++|+.|+.+++
T Consensus        75 ~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll  107 (338)
T d1orra_          75 SCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLL  107 (338)
T ss_dssp             EEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred             eEEeecccccccccccChHHHHHHHHHHHHHHH
Confidence            99999998763       345677888776653

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.45  E-value=4e-14  Score=98.61  Aligned_cols=100  Identities=21%  Similarity=0.118  Sum_probs=72.6

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH-HHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-LNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .|++|||||+|.||+.++++|++.|++|+.+++.... .......-......+.++.+|++|.+.+++++..      -+
T Consensus         1 ~K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~------~~   74 (347)
T d1z45a2           1 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKE------YK   74 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHH------SC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhc------cC
Confidence            4789999999999999999999999999998763321 1111111111245677889999999998888865      47


Q ss_pred             ccEEEecCCCCCc-------cceeeeeccceecc
Q 033396           92 LNILVSSAQLPYS-------QRKFFVKSRGPYGS  118 (120)
Q Consensus        92 id~li~~ag~~~~-------~~~~~~n~~g~~~~  118 (120)
                      +|+|||+|+....       .....+|+.|+.++
T Consensus        75 ~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~l  108 (347)
T d1z45a2          75 IDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVL  108 (347)
T ss_dssp             CCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEccccccccccccCcccccccchhhhHHH
Confidence            9999999998762       23445666665544

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.45  E-value=4.5e-14  Score=93.77  Aligned_cols=92  Identities=24%  Similarity=0.243  Sum_probs=71.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      .|++|||||++|||+++|++|+++|++|++++|+++            +.+...+.+|+++......+..+.....  ..
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~   66 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE------------GEDLIYVEGDVTREEDVRRAVARAQEEA--PL   66 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC------------SSSSEEEECCTTCHHHHHHHHHHHHHHS--CE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc------------cccceEeeccccchhhhHHHHHhhhccc--cc
Confidence            489999999999999999999999999999999753            3356778999999999988888877765  45


Q ss_pred             cEEEecCCCCC---------------ccceeeeeccceecc
Q 033396           93 NILVSSAQLPY---------------SQRKFFVKSRGPYGS  118 (120)
Q Consensus        93 d~li~~ag~~~---------------~~~~~~~n~~g~~~~  118 (120)
                      +.+++++++..               +.+.+++|+.+++.+
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  107 (241)
T d1uaya_          67 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNV  107 (241)
T ss_dssp             EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHH
T ss_pred             cchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHH
Confidence            55666665543               134566676665544

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.44  E-value=3.1e-14  Score=98.94  Aligned_cols=101  Identities=16%  Similarity=0.089  Sum_probs=78.5

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      +++|.+|||||+|.||..++++|++.|++|+.++|+........+.. .....+.++.+|++|++.+.+++..      .
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~i~~~~~Dl~d~~~l~~~~~~------~   78 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETA-RVADGMQSEIGDIRDQNKLLESIRE------F   78 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHT-TTTTTSEEEECCTTCHHHHHHHHHH------H
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhh-hcccCCeEEEeeccChHhhhhhhhh------c
Confidence            78999999999999999999999999999999999765433332222 1234588899999999988887765      4


Q ss_pred             cccEEEecCCCCCc-------cceeeeeccceecc
Q 033396           91 KLNILVSSAQLPYS-------QRKFFVKSRGPYGS  118 (120)
Q Consensus        91 ~id~li~~ag~~~~-------~~~~~~n~~g~~~~  118 (120)
                      .+++++|.++....       ...+.+|+.|+.++
T Consensus        79 ~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~  113 (356)
T d1rkxa_          79 QPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYL  113 (356)
T ss_dssp             CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHH
T ss_pred             hhhhhhhhhccccccccccCCccccccccccchhh
Confidence            78999999998763       34566676665543

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.44  E-value=8.3e-14  Score=98.33  Aligned_cols=100  Identities=16%  Similarity=0.165  Sum_probs=74.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh----------------HHHHHHHHHHHh-cCCeEEEEeccCCCHH
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE----------------TELNQRIQEWKS-KGLQVSGNACDLKIRA   75 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~----------------~~~~~~~~~~~~-~~~~~~~~~~D~~~~~   75 (120)
                      |+.+|||||+|.||.+++++|++.|+.|+.+|...                ....+....... .+.++.++.+|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            67899999999999999999999999999987321                111222222222 3567899999999999


Q ss_pred             HHHHHHHHHHhhcCCcccEEEecCCCCCc----------cceeeeeccceecc
Q 033396           76 QREKLMETVSSQFDGKLNILVSSAQLPYS----------QRKFFVKSRGPYGS  118 (120)
Q Consensus        76 ~~~~~~~~~~~~~~g~id~li~~ag~~~~----------~~~~~~n~~g~~~~  118 (120)
                      .++++++..      ++|+|+|.|+....          ...+.+|+.|+.++
T Consensus        81 ~l~~~~~~~------~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nl  127 (393)
T d1i24a_          81 FLAESFKSF------EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNV  127 (393)
T ss_dssp             HHHHHHHHH------CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhh------cchheeccccccccccccccccccccccccccccccHH
Confidence            999888763      68999999998652          13456777777654

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=1.2e-13  Score=90.05  Aligned_cols=80  Identities=13%  Similarity=0.060  Sum_probs=66.7

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .-|.++||||+|+||++++++|+++|++|.++.|++.++...      ....+.++.+|++|++++.+++        .+
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~------~~~~~~~~~gD~~d~~~l~~al--------~~   67 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTV--------AG   67 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHH--------TT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc------cccccccccccccchhhHHHHh--------cC
Confidence            457799999999999999999999999999999987664211      2345778999999999988887        56


Q ss_pred             ccEEEecCCCCCcc
Q 033396           92 LNILVSSAQLPYSQ  105 (120)
Q Consensus        92 id~li~~ag~~~~~  105 (120)
                      .|+||+++|.....
T Consensus        68 ~d~vi~~~g~~~~~   81 (205)
T d1hdoa_          68 QDAVIVLLGTRNDL   81 (205)
T ss_dssp             CSEEEECCCCTTCC
T ss_pred             CCEEEEEeccCCch
Confidence            89999999986643

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=5e-13  Score=92.75  Aligned_cols=99  Identities=20%  Similarity=0.180  Sum_probs=73.0

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC------hHHHHHHHHHHHh-cCCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN------ETELNQRIQEWKS-KGLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      |.+|||||+|.||.+++++|++.|++|+.+++.      ........+.+.. ...++.++.+|++|.+.+.+++..   
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~---   79 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK---   79 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH---
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccc---
Confidence            678999999999999999999999999998641      1111111122221 256788999999999998888765   


Q ss_pred             hcCCcccEEEecCCCCCc-------cceeeeeccceecc
Q 033396           87 QFDGKLNILVSSAQLPYS-------QRKFFVKSRGPYGS  118 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~~-------~~~~~~n~~g~~~~  118 (120)
                         ..+++++|.|+....       ...+++|+.|+.++
T Consensus        80 ---~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l  115 (346)
T d1ek6a_          80 ---YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQL  115 (346)
T ss_dssp             ---CCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHH
T ss_pred             ---cccccccccccccCcHhhHhCHHHHHHhhhcccccc
Confidence               578899999998762       34467777776554

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.34  E-value=3.5e-13  Score=93.73  Aligned_cols=100  Identities=18%  Similarity=0.192  Sum_probs=75.4

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHH--hcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK--SKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .+||+++||||+|.||..++++|+++|++|+.+.|+............  ........+..|+++..++..++       
T Consensus         9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------   81 (342)
T d1y1pa1           9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI-------   81 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT-------
T ss_pred             CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhc-------
Confidence            579999999999999999999999999999999998766544433222  23455666788999988776666       


Q ss_pred             CCcccEEEecCCCCCc----cceeeeeccceecc
Q 033396           89 DGKLNILVSSAQLPYS----QRKFFVKSRGPYGS  118 (120)
Q Consensus        89 ~g~id~li~~ag~~~~----~~~~~~n~~g~~~~  118 (120)
                       ..+|.++|+++....    ...+..|+.|+.++
T Consensus        82 -~~~~~v~~~a~~~~~~~~~~~~~~~nv~gt~~l  114 (342)
T d1y1pa1          82 -KGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNA  114 (342)
T ss_dssp             -TTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHH
T ss_pred             -ccchhhhhhcccccccccccccccchhhhHHHH
Confidence             568999999988663    23345566665543

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.31  E-value=7.2e-13  Score=90.84  Aligned_cols=98  Identities=17%  Similarity=0.076  Sum_probs=72.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH-HHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-LNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      |+||||||+|.||+.++++|+++|++|+.++|.... .....+.+. ...++.++.+|++|...+.+++..      ...
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~------~~~   73 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIK------AQP   73 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHH------HCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhc-ccCCcEEEEccccChHHhhhhhcc------ccc
Confidence            689999999999999999999999999999986432 111222222 235688999999999988888766      367


Q ss_pred             cEEEecCCCCCc-------cceeeeeccceecc
Q 033396           93 NILVSSAQLPYS-------QRKFFVKSRGPYGS  118 (120)
Q Consensus        93 d~li~~ag~~~~-------~~~~~~n~~g~~~~  118 (120)
                      ++++++++....       ...+..|+.|+.++
T Consensus        74 ~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~  106 (321)
T d1rpna_          74 QEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHL  106 (321)
T ss_dssp             SEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHH
T ss_pred             cccccccccccccccccchHHHHhhhhhchHHH
Confidence            788888877662       23356666666544

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.30  E-value=3.3e-12  Score=88.01  Aligned_cols=84  Identities=20%  Similarity=0.104  Sum_probs=64.5

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChH-----HHHHHHHHHH-hcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET-----ELNQRIQEWK-SKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      |++|||||+|.||++++++|++.|++|+.++|...     ....+..... .....+.++.+|+++.+++.+.++.    
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~----   77 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDV----   77 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHH----
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhh----
Confidence            78999999999999999999999999999998432     1111111111 1246788999999999998888875    


Q ss_pred             cCCcccEEEecCCCCC
Q 033396           88 FDGKLNILVSSAQLPY  103 (120)
Q Consensus        88 ~~g~id~li~~ag~~~  103 (120)
                        ..+|++||+|+...
T Consensus        78 --~~~D~Vih~Aa~~~   91 (339)
T d1n7ha_          78 --IKPDEVYNLAAQSH   91 (339)
T ss_dssp             --HCCSEEEECCSCCC
T ss_pred             --hccchhhhcccccc
Confidence              37899999999876

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=1.6e-12  Score=89.88  Aligned_cols=99  Identities=18%  Similarity=0.056  Sum_probs=69.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChH-----HHHHHHHHHHh-cCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET-----ELNQRIQEWKS-KGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      |.+|||||+|.||.+++++|.+.|++|+.++|...     ..+........ ...++.++.+|++|++.+.+++++    
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----   77 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINE----   77 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHH----
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhh----
Confidence            34599999999999999999999999999998532     11111111111 135788999999999999988876    


Q ss_pred             cCCcccEEEecCCCCCc-------cceeeeeccceecc
Q 033396           88 FDGKLNILVSSAQLPYS-------QRKFFVKSRGPYGS  118 (120)
Q Consensus        88 ~~g~id~li~~ag~~~~-------~~~~~~n~~g~~~~  118 (120)
                        ..++++++.++....       ...+++|+.|+.++
T Consensus        78 --~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~l  113 (347)
T d1t2aa_          78 --VKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRL  113 (347)
T ss_dssp             --HCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHH
T ss_pred             --cccceeeeeeeccccchhhccchhhhhhHHHHHHHH
Confidence              367888888887652       23356777776544

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.23  E-value=1e-12  Score=92.16  Aligned_cols=98  Identities=16%  Similarity=0.123  Sum_probs=71.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEE-EEeeCChHH-HHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIV-HTCSRNETE-LNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      .+|||||+|.||++++++|++.|+.+ +.+++.... -......+ ....++.++.+|++|+..+.++++.      ..+
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~l~~~~~~------~~~   74 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDI-SESNRYNFEHADICDSAEITRIFEQ------YQP   74 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHH------HCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhh-hhcCCcEEEEccCCCHHHHHHHHHh------CCC
Confidence            48999999999999999999999874 445543211 01111111 1245788999999999999888865      368


Q ss_pred             cEEEecCCCCC-------ccceeeeeccceeccc
Q 033396           93 NILVSSAQLPY-------SQRKFFVKSRGPYGSI  119 (120)
Q Consensus        93 d~li~~ag~~~-------~~~~~~~n~~g~~~~~  119 (120)
                      |+|||+|+..+       +...+++|+.|+.++.
T Consensus        75 d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~  108 (361)
T d1kewa_          75 DAVMHLAAESHVDRSITGPAAFIETNIVGTYALL  108 (361)
T ss_dssp             SEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHH
T ss_pred             CEEEECccccchhhHHhCHHHHHHHHHHHHHHHH
Confidence            99999999876       2456788888876653

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.20  E-value=5.6e-11  Score=77.31  Aligned_cols=75  Identities=17%  Similarity=0.077  Sum_probs=60.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCE--EEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAI--VHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      +++|||||+|+||++++++|+++|+.  |+...|++....       .....+.++.+|+++.+.+.+++        ..
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~-------~~~~~~~~~~~d~~~~~~~~~~~--------~~   68 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE-------KIGGEADVFIGDITDADSINPAF--------QG   68 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHH-------HTTCCTTEEECCTTSHHHHHHHH--------TT
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHH-------hccCCcEEEEeeecccccccccc--------cc
Confidence            58999999999999999999999965  556677765432       22445678899999999888877        56


Q ss_pred             ccEEEecCCCCC
Q 033396           92 LNILVSSAQLPY  103 (120)
Q Consensus        92 id~li~~ag~~~  103 (120)
                      +|.+||+++...
T Consensus        69 ~d~vi~~a~~~~   80 (252)
T d2q46a1          69 IDALVILTSAVP   80 (252)
T ss_dssp             CSEEEECCCCCC
T ss_pred             ceeeEEEEeecc
Confidence            899999998765

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.20  E-value=2e-11  Score=85.68  Aligned_cols=86  Identities=15%  Similarity=0.119  Sum_probs=64.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHH-CCCEEEEeeCC---------hHHHHHHHHHHHh--------cCCeEEEEeccCCCH
Q 033396           13 GMTALVTGGTKGIGYAVVEELAA-FGAIVHTCSRN---------ETELNQRIQEWKS--------KGLQVSGNACDLKIR   74 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~-~g~~v~~~~~~---------~~~~~~~~~~~~~--------~~~~~~~~~~D~~~~   74 (120)
                      +..+|||||+|.||+.++++|++ .|++|+++|+-         ....+.....+..        ....+.++.+|++|+
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            34699999999999999999986 68999998741         1112222222221        134678889999999


Q ss_pred             HHHHHHHHHHHhhcCCcccEEEecCCCCC
Q 033396           75 AQREKLMETVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        75 ~~~~~~~~~~~~~~~g~id~li~~ag~~~  103 (120)
                      +.+++++++.     .++|+|+|.|+...
T Consensus        82 ~~l~~~~~~~-----~~~d~ViH~Aa~~~  105 (383)
T d1gy8a_          82 DFLNGVFTRH-----GPIDAVVHMCAFLA  105 (383)
T ss_dssp             HHHHHHHHHS-----CCCCEEEECCCCCC
T ss_pred             HHhhhhhhcc-----ceeehhhccccccc
Confidence            9888888654     67999999999876

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.16  E-value=1e-11  Score=85.83  Aligned_cols=92  Identities=13%  Similarity=0.074  Sum_probs=68.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           15 TALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      .+|||||+|.||++++++|+++| ++|+.+++.........     ...++.++.+|+++.+++.+.+.       ..+|
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-----~~~~~~~i~~Di~~~~~~~~~~~-------~~~d   69 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHV-------KKCD   69 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHH-------HHCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-----cCCCeEEEECccCChHHHHHHHH-------hCCC
Confidence            48999999999999999999999 58999887654322111     14578999999998766554332       3589


Q ss_pred             EEEecCCCCCc-------cceeeeeccceecc
Q 033396           94 ILVSSAQLPYS-------QRKFFVKSRGPYGS  118 (120)
Q Consensus        94 ~li~~ag~~~~-------~~~~~~n~~g~~~~  118 (120)
                      ++||+|+....       ...+.+|+.|+.++
T Consensus        70 ~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~l  101 (342)
T d2blla1          70 VVLPLVAIATPIEYTRNPLRVFELDFEENLRI  101 (342)
T ss_dssp             EEEECBCCCCHHHHHHSHHHHHHHHTHHHHHH
T ss_pred             ccccccccccccccccCCcccccccccccccc
Confidence            99999998763       24466777766554

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.12  E-value=4.4e-11  Score=82.67  Aligned_cols=101  Identities=13%  Similarity=0.019  Sum_probs=72.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh----HHHHHHHHHHH-hcCCeEEEEeccCCCHHHHHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE----TELNQRIQEWK-SKGLQVSGNACDLKIRAQREKLMETV   84 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (120)
                      ..+.|++|||||+|.||++++++|.+.|++|+.+++..    ........... .....+.++.+|..|........   
T Consensus        13 ~~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~---   89 (341)
T d1sb8a_          13 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC---   89 (341)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH---
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccc---
Confidence            46789999999999999999999999999999998632    12222211111 12457889999999988766554   


Q ss_pred             HhhcCCcccEEEecCCCCCc-------cceeeeeccceecc
Q 033396           85 SSQFDGKLNILVSSAQLPYS-------QRKFFVKSRGPYGS  118 (120)
Q Consensus        85 ~~~~~g~id~li~~ag~~~~-------~~~~~~n~~g~~~~  118 (120)
                           ...+.+++.+.....       ...+++|+.|+.++
T Consensus        90 -----~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~l  125 (341)
T d1sb8a_          90 -----AGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNM  125 (341)
T ss_dssp             -----TTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHH
T ss_pred             -----ccccccccccccccccccccCccchhheeehhHHHH
Confidence                 567888888876552       34567777776654

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.10  E-value=8.2e-12  Score=86.65  Aligned_cols=96  Identities=20%  Similarity=0.151  Sum_probs=67.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh---HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE---TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      |.+|||||+|.||..++++|++.|+.|.++.++.   ........  ...+.++.++.+|++|.+.+..++        .
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~--~~~~~~i~~~~~Di~d~~~~~~~~--------~   72 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLE--AILGDRVELVVGDIADAELVDKLA--------A   72 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTG--GGCSSSEEEEECCTTCHHHHHHHH--------T
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHH--HhhcCCeEEEEccCCCHHHHHHHH--------h
Confidence            5699999999999999999999997654443321   11000001  112567889999999999888776        4


Q ss_pred             cccEEEecCCCCCc-------cceeeeeccceeccc
Q 033396           91 KLNILVSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        91 ~id~li~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                      ..+.++|.|+....       ...+++|+.|+.+++
T Consensus        73 ~~~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll  108 (346)
T d1oc2a_          73 KADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLL  108 (346)
T ss_dssp             TCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHH
T ss_pred             hhhhhhhhhhcccccchhhCcccceeeehHhHHhhh
Confidence            57888999988663       355677887776653

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.07  E-value=5.8e-11  Score=82.63  Aligned_cols=82  Identities=15%  Similarity=0.116  Sum_probs=62.4

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ++-+++.+|||||+|.||++++++|.++|++|+.+++.....      ....-....+..+|+.+.+.+.+++       
T Consensus        11 ~~~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~------~~~~~~~~~~~~~D~~~~~~~~~~~-------   77 (363)
T d2c5aa1          11 WPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH------MTEDMFCDEFHLVDLRVMENCLKVT-------   77 (363)
T ss_dssp             CTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS------SCGGGTCSEEEECCTTSHHHHHHHH-------
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccc------hhhhcccCcEEEeechhHHHHHHHh-------
Confidence            345677899999999999999999999999999998754321      0111223456778999988776666       


Q ss_pred             CCcccEEEecCCCCCc
Q 033396           89 DGKLNILVSSAQLPYS  104 (120)
Q Consensus        89 ~g~id~li~~ag~~~~  104 (120)
                       ..+|.+||.|+....
T Consensus        78 -~~~d~Vih~a~~~~~   92 (363)
T d2c5aa1          78 -EGVDHVFNLAADMGG   92 (363)
T ss_dssp             -TTCSEEEECCCCCCC
T ss_pred             -hcCCeEeeccccccc
Confidence             468999999988763

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=1.1e-10  Score=77.12  Aligned_cols=81  Identities=10%  Similarity=0.163  Sum_probs=61.4

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      +.|++|+++||||+|.||.+++++|+++|.  +|++++|++.....      .....+....+|+.+.+++.+++     
T Consensus        10 ~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~------~~~~~i~~~~~D~~~~~~~~~~~-----   78 (232)
T d2bkaa1          10 FRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE------EAYKNVNQEVVDFEKLDDYASAF-----   78 (232)
T ss_dssp             HHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS------GGGGGCEEEECCGGGGGGGGGGG-----
T ss_pred             hCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc------cccceeeeeeecccccccccccc-----
Confidence            347889999999999999999999999994  89999987543211      11235666678888766554444     


Q ss_pred             hcCCcccEEEecCCCCC
Q 033396           87 QFDGKLNILVSSAQLPY  103 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~  103 (120)
                         ...|+++|++|...
T Consensus        79 ---~~~d~vi~~~~~~~   92 (232)
T d2bkaa1          79 ---QGHDVGFCCLGTTR   92 (232)
T ss_dssp             ---SSCSEEEECCCCCH
T ss_pred             ---cccccccccccccc
Confidence               57899999999765

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=98.98  E-value=1.8e-09  Score=72.63  Aligned_cols=79  Identities=19%  Similarity=0.196  Sum_probs=59.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH--H--HHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE--L--NQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .+|||||+|.||.+++++|++.|++|+++.|+...  .  ......+.  ...+.++.+|+++.+.+.+.+        .
T Consensus         5 KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~--~~~v~~v~~d~~d~~~~~~~~--------~   74 (312)
T d1qyda_           5 RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDAL--------K   74 (312)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHH--------T
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhc--cCCcEEEEeecccchhhhhhc--------c
Confidence            49999999999999999999999999999886432  1  11222222  345678899999998887777        5


Q ss_pred             cccEEEecCCCCC
Q 033396           91 KLNILVSSAQLPY  103 (120)
Q Consensus        91 ~id~li~~ag~~~  103 (120)
                      ..+.++++++...
T Consensus        75 ~~~~~~~~~~~~~   87 (312)
T d1qyda_          75 QVDVVISALAGGV   87 (312)
T ss_dssp             TCSEEEECCCCSS
T ss_pred             Ccchhhhhhhhcc
Confidence            6788888876544

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=98.98  E-value=1.6e-10  Score=78.78  Aligned_cols=80  Identities=9%  Similarity=0.069  Sum_probs=62.6

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      -|.+|||||+|.||++++++|++.|+.++++++..                    .+|+.+.+.+..+++.      ..+
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~--------------------~~~~~~~~~~~~~~~~------~~~   55 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------ELNLLDSRAVHDFFAS------ERI   55 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------TCCTTCHHHHHHHHHH------HCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch--------------------hccccCHHHHHHHHhh------cCC
Confidence            36799999999999999999999999988776432                    1589999888887754      468


Q ss_pred             cEEEecCCCCCc--------cceeeeeccceecc
Q 033396           93 NILVSSAQLPYS--------QRKFFVKSRGPYGS  118 (120)
Q Consensus        93 d~li~~ag~~~~--------~~~~~~n~~g~~~~  118 (120)
                      |.++|+++....        ...++.|+.|+.++
T Consensus        56 d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~l   89 (315)
T d1e6ua_          56 DQVYLAAAKVGGIVANNTYPADFIYQNMMIESNI   89 (315)
T ss_dssp             SEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHH
T ss_pred             CEEEEcchhccccccchhhHHHHHHHHHHHHHHH
Confidence            999999987652        23456777776654

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=98.98  E-value=7.1e-10  Score=74.05  Aligned_cols=62  Identities=18%  Similarity=0.240  Sum_probs=54.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   94 (120)
                      .++||||+|.||+.++++|.++|++|+.++|..                     +|++|.++++++++..      ++|+
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------------~D~~d~~~~~~~l~~~------~~d~   55 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------------LDITNVLAVNKFFNEK------KPNV   55 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------------CCTTCHHHHHHHHHHH------CCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------------ccCCCHHHHHHHHHHc------CCCE
Confidence            489999999999999999999999999998763                     5899999988888653      6899


Q ss_pred             EEecCCCCC
Q 033396           95 LVSSAQLPY  103 (120)
Q Consensus        95 li~~ag~~~  103 (120)
                      +||+++...
T Consensus        56 vih~a~~~~   64 (281)
T d1vl0a_          56 VINCAAHTA   64 (281)
T ss_dssp             EEECCCCCC
T ss_pred             EEeeccccc
Confidence            999999876

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=7.9e-12  Score=85.86  Aligned_cols=92  Identities=15%  Similarity=0.175  Sum_probs=60.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      |.++||||+|.||++++++|++.|++|+.+++......+..... .....+.....|..+.     +       + .++|
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~-----~-------~-~~~d   67 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW-IGHENFELINHDVVEP-----L-------Y-IEVD   67 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG-TTCTTEEEEECCTTSC-----C-------C-CCCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHh-cCCCceEEEehHHHHH-----H-------H-cCCC
Confidence            78999999999999999999999999999986322111111111 1123344444444321     1       2 4689


Q ss_pred             EEEecCCCCCc-------cceeeeeccceeccc
Q 033396           94 ILVSSAQLPYS-------QRKFFVKSRGPYGSI  119 (120)
Q Consensus        94 ~li~~ag~~~~-------~~~~~~n~~g~~~~~  119 (120)
                      +|||+|+....       ...+++|+.|+.+++
T Consensus        68 ~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll  100 (312)
T d2b69a1          68 QIYHLASPASPPNYMYNPIKTLKTNTIGTLNML  100 (312)
T ss_dssp             EEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred             EEEECcccCCchhHHhCHHHHHHHHHHHHHHHH
Confidence            99999997652       345677887776653

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=98.91  E-value=8.3e-10  Score=74.02  Aligned_cols=65  Identities=17%  Similarity=0.286  Sum_probs=51.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   94 (120)
                      .+|||||+|.||.+++++|.+.|..|++ ++....                 +.+|++|.+.++++++..      ++|+
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v~~-~~~~~~-----------------~~~Dl~~~~~~~~~i~~~------~~D~   57 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLIAL-DVHSKE-----------------FCGDFSNPKGVAETVRKL------RPDV   57 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEEEE-CTTCSS-----------------SCCCTTCHHHHHHHHHHH------CCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEE-ECCCcc-----------------ccCcCCCHHHHHHHHHHc------CCCE
Confidence            4899999999999999999999865544 443211                 246999999988888653      6899


Q ss_pred             EEecCCCCC
Q 033396           95 LVSSAQLPY  103 (120)
Q Consensus        95 li~~ag~~~  103 (120)
                      |||+||+..
T Consensus        58 Vih~Aa~~~   66 (298)
T d1n2sa_          58 IVNAAAHTA   66 (298)
T ss_dssp             EEECCCCCC
T ss_pred             EEEeccccc
Confidence            999999876

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=98.91  E-value=3.5e-09  Score=70.70  Aligned_cols=83  Identities=17%  Similarity=0.127  Sum_probs=60.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHH--HHHHHHHHh-cCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETEL--NQRIQEWKS-KGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .|.+|||||+|.||++++++|++.|++|+.++|+....  ......+.. ....+.++.+|+.+.....+.+        
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--------   74 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAV--------   74 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHH--------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhh--------
Confidence            46799999999999999999999999999999864321  111111221 1344667889999998877766        


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                      ...+.++++++...
T Consensus        75 ~~~~~vi~~~~~~~   88 (307)
T d1qyca_          75 KNVDVVISTVGSLQ   88 (307)
T ss_dssp             HTCSEEEECCCGGG
T ss_pred             hhceeeeecccccc
Confidence            34678888876644

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.83  E-value=1.2e-08  Score=70.30  Aligned_cols=78  Identities=18%  Similarity=0.113  Sum_probs=56.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHH-HHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQ-REKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~g   90 (120)
                      +.|+++||||+|.||.+++++|++.|++|+++.|+......  ..+.. ...+..+.+|+.|..+ ++.++        .
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~-~~~v~~~~gD~~d~~~~~~~a~--------~   70 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA-IPNVTLFQGPLLNNVPLMDTLF--------E   70 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT-STTEEEEESCCTTCHHHHHHHH--------T
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcc-cCCCEEEEeeCCCcHHHHHHHh--------c
Confidence            46899999999999999999999999999999997654321  12222 2457788999988654 44343        4


Q ss_pred             cccEEEecCC
Q 033396           91 KLNILVSSAQ  100 (120)
Q Consensus        91 ~id~li~~ag  100 (120)
                      ..|.++.+..
T Consensus        71 ~~~~~~~~~~   80 (350)
T d1xgka_          71 GAHLAFINTT   80 (350)
T ss_dssp             TCSEEEECCC
T ss_pred             CCceEEeecc
Confidence            5666655543

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=98.78  E-value=1.7e-09  Score=73.98  Aligned_cols=95  Identities=15%  Similarity=0.008  Sum_probs=64.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEE------EEeeCChHH-HHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIV------HTCSRNETE-LNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .++||||+|.||++++++|+++|+.|      +..+..... .......+ .....+.++..|.++........      
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~------   74 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV-DADPRLRFVHGDIRDAGLLAREL------   74 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG-TTCTTEEEEECCTTCHHHHHHHT------
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhh-hcCCCeEEEEeccccchhhhccc------
Confidence            48999999999999999999999654      444332111 00001111 22467889999999988665443      


Q ss_pred             cCCcccEEEecCCCCC-------ccceeeeeccceecc
Q 033396           88 FDGKLNILVSSAQLPY-------SQRKFFVKSRGPYGS  118 (120)
Q Consensus        88 ~~g~id~li~~ag~~~-------~~~~~~~n~~g~~~~  118 (120)
                        ..+|.++|+|+...       +...+++|+.|++++
T Consensus        75 --~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~l  110 (322)
T d1r6da_          75 --RGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTL  110 (322)
T ss_dssp             --TTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHH
T ss_pred             --cccceEEeecccccccccccchHHHhhhhHHHHHHH
Confidence              57899999998876       234456777776654

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.69  E-value=1.2e-08  Score=64.31  Aligned_cols=46  Identities=24%  Similarity=0.392  Sum_probs=40.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK   60 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~   60 (120)
                      ++.|+||+|++|+++|+.|++.|++|++.+|++++++++.+++...
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~   47 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRI   47 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence            3677888899999999999999999999999999988888887754

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.47  E-value=7.7e-08  Score=61.92  Aligned_cols=71  Identities=14%  Similarity=0.142  Sum_probs=48.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .|.++||||+|.||++++++|+++|+  +|+...|++..          ....+   ..+..|..+       ..+...+
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~----------~~~~~---~~~~~d~~~-------~~~~~~~   61 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPRL---DNPVGPLAE-------LLPQLDG   61 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTTE---ECCBSCHHH-------HGGGCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh----------hcccc---cccccchhh-------hhhcccc
Confidence            58899999999999999999999996  67777765421          01122   234444332       2223336


Q ss_pred             cccEEEecCCCCC
Q 033396           91 KLNILVSSAQLPY  103 (120)
Q Consensus        91 ~id~li~~ag~~~  103 (120)
                      .+|.+|+++|...
T Consensus        62 ~~d~vi~~~g~~~   74 (212)
T d2a35a1          62 SIDTAFCCLGTTI   74 (212)
T ss_dssp             CCSEEEECCCCCH
T ss_pred             chheeeeeeeeec
Confidence            7899999998864

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.45  E-value=9.8e-07  Score=55.67  Aligned_cols=80  Identities=18%  Similarity=0.178  Sum_probs=55.6

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      +|.+++|+||++++|...+......|++|+.+.+++++.+    .++..+....+.   .++++..+.+.+....   .+
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~----~~~~~Ga~~vi~---~~~~~~~~~~~~~~~~---~G   98 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIA----YLKQIGFDAAFN---YKTVNSLEEALKKASP---DG   98 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH----HHHHTTCSEEEE---TTSCSCHHHHHHHHCT---TC
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHH----HHHhhhhhhhcc---cccccHHHHHHHHhhc---CC
Confidence            5889999999999999999999999999999998876543    233346544433   3333323333322211   56


Q ss_pred             ccEEEecCCC
Q 033396           92 LNILVSSAQL  101 (120)
Q Consensus        92 id~li~~ag~  101 (120)
                      +|+++++.|-
T Consensus        99 vd~v~D~vG~  108 (182)
T d1v3va2          99 YDCYFDNVGG  108 (182)
T ss_dssp             EEEEEESSCH
T ss_pred             CceeEEecCc
Confidence            9999999984

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.42  E-value=1.3e-06  Score=55.29  Aligned_cols=84  Identities=17%  Similarity=0.196  Sum_probs=61.9

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHH---HHHHHHhcCCeEEEEeccCCCHHHHHHHHHHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQ---RIQEWKSKGLQVSGNACDLKIRAQREKLMETV   84 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (120)
                      .++++|+++|.|+ ||.+++++..|.+.|. +++++.|+.+..++   ..+.+..... ......|..+.+.+...+   
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~---   88 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTD-CVVTVTDLADQQAFAEAL---   88 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS-CEEEEEETTCHHHHHHHH---
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcC-cceEeeecccccchhhhh---
Confidence            4678999999999 7999999999999995 68899998665443   3444443322 334467888877766555   


Q ss_pred             HhhcCCcccEEEecCCCC
Q 033396           85 SSQFDGKLNILVSSAQLP  102 (120)
Q Consensus        85 ~~~~~g~id~li~~ag~~  102 (120)
                           ...|++||+..+.
T Consensus        89 -----~~~diiIN~Tp~G  101 (182)
T d1vi2a1          89 -----ASADILTNGTKVG  101 (182)
T ss_dssp             -----HTCSEEEECSSTT
T ss_pred             -----cccceeccccCCc
Confidence                 4689999998653

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.39  E-value=2.7e-06  Score=52.69  Aligned_cols=74  Identities=14%  Similarity=0.101  Sum_probs=54.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      +|.++|.|| |.+|..+|+.|+++|++|++++|+.+..+++.+.    .........+..........+        ...
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~----~~~~~~~~~~~~~~~~~~~~i--------~~~   68 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG----VQHSTPISLDVNDDAALDAEV--------AKH   68 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTT----CTTEEEEECCTTCHHHHHHHH--------TTS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhc----ccccccccccccchhhhHhhh--------hcc
Confidence            688999987 9999999999999999999999999887766543    233444455666655555555        345


Q ss_pred             cEEEecC
Q 033396           93 NILVSSA   99 (120)
Q Consensus        93 d~li~~a   99 (120)
                      |.++...
T Consensus        69 ~~~i~~~   75 (182)
T d1e5qa1          69 DLVISLI   75 (182)
T ss_dssp             SEEEECS
T ss_pred             ceeEeec
Confidence            6666544

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=2.4e-06  Score=53.41  Aligned_cols=80  Identities=18%  Similarity=0.247  Sum_probs=55.4

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+.+++|+|++|++|...+......|++|+.+.+++++.+.+    .+.|....   .|.++++..+++.+....   .+
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~----~~~Ga~~v---i~~~~~~~~~~i~~~t~~---~g   97 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV----LQNGAHEV---FNHREVNYIDKIKKYVGE---KG   97 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTCSEE---EETTSTTHHHHHHHHHCT---TC
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccc----cccCcccc---cccccccHHHHhhhhhcc---CC
Confidence            678999999999999999998888999999998876554322    23454432   356655433333332211   45


Q ss_pred             ccEEEecCCC
Q 033396           92 LNILVSSAQL  101 (120)
Q Consensus        92 id~li~~ag~  101 (120)
                      +|+++.++|-
T Consensus        98 ~d~v~d~~g~  107 (174)
T d1yb5a2          98 IDIIIEMLAN  107 (174)
T ss_dssp             EEEEEESCHH
T ss_pred             ceEEeecccH
Confidence            8999999874

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=98.28  E-value=2.4e-06  Score=54.16  Aligned_cols=87  Identities=13%  Similarity=0.076  Sum_probs=58.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      .+++++||+|++|.+.+......|++|+.+.++.+..++..+.+.+.|....+.. |-.+..++...+.++....++++|
T Consensus        31 ~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~-~~~~~~~~~~~v~~~~~~~g~~vd  109 (189)
T d1gu7a2          31 DWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITE-DQNNSREFGPTIKEWIKQSGGEAK  109 (189)
T ss_dssp             CEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEH-HHHHCGGGHHHHHHHHHHHTCCEE
T ss_pred             EEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEec-cccchhHHHHHHHHHHhhccCCce
Confidence            3455579999999999888888999999998877766666666666676554432 222222344445554444446799


Q ss_pred             EEEecCCC
Q 033396           94 ILVSSAQL  101 (120)
Q Consensus        94 ~li~~ag~  101 (120)
                      +++.+.|-
T Consensus       110 vv~D~vg~  117 (189)
T d1gu7a2         110 LALNCVGG  117 (189)
T ss_dssp             EEEESSCH
T ss_pred             EEEECCCc
Confidence            99999874

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.26  E-value=3.2e-06  Score=52.44  Aligned_cols=75  Identities=21%  Similarity=0.264  Sum_probs=57.8

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .++++.++|.|+ |.+|..+++.|...|+ ++.++.|+.+..+++..++   +..+       .+.+++...+       
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~---~~~~-------~~~~~~~~~l-------   82 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL---GGEA-------VRFDELVDHL-------   82 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH---TCEE-------CCGGGHHHHH-------
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh---hccc-------ccchhHHHHh-------
Confidence            578999999998 9999999999999997 6999999988887777665   3221       1223344444       


Q ss_pred             CCcccEEEecCCCCC
Q 033396           89 DGKLNILVSSAQLPY  103 (120)
Q Consensus        89 ~g~id~li~~ag~~~  103 (120)
                       ...|++|++.+.+.
T Consensus        83 -~~~Divi~atss~~   96 (159)
T d1gpja2          83 -ARSDVVVSATAAPH   96 (159)
T ss_dssp             -HTCSEEEECCSSSS
T ss_pred             -ccCCEEEEecCCCC
Confidence             56899999998765

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=98.25  E-value=4.5e-06  Score=52.15  Aligned_cols=82  Identities=13%  Similarity=0.157  Sum_probs=57.9

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+.+++|+||++++|...+......|++|+.+++++++.+...    +.|....   .|.++++-.+++. +.-.  +..
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~----~lGa~~v---i~~~~~d~~~~v~-~~t~--g~g   97 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL----KAGAWQV---INYREEDLVERLK-EITG--GKK   97 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----HHTCSEE---EETTTSCHHHHHH-HHTT--TCC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH----hcCCeEE---EECCCCCHHHHHH-HHhC--CCC
Confidence            4789999999999999999988889999999999988765433    2354432   3566654333332 2211  246


Q ss_pred             ccEEEecCCCCC
Q 033396           92 LNILVSSAQLPY  103 (120)
Q Consensus        92 id~li~~ag~~~  103 (120)
                      +|+++.++|-..
T Consensus        98 ~d~v~d~~g~~~  109 (179)
T d1qora2          98 VRVVYDSVGRDT  109 (179)
T ss_dssp             EEEEEECSCGGG
T ss_pred             eEEEEeCccHHH
Confidence            899999998644

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.24  E-value=1.4e-05  Score=49.46  Aligned_cols=85  Identities=24%  Similarity=0.279  Sum_probs=58.2

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+.+++|+| +|++|...+..+...|++|+.+++++.+++...    +.+....+. .|-.+ ++.....+++.+..++.
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~----~~ga~~~~~-~~~~~-~~~~~~~~~~~~~~g~g   98 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK----NCGADVTLV-VDPAK-EEESSIIERIRSAIGDL   98 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HTTCSEEEE-CCTTT-SCHHHHHHHHHHHSSSC
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHH----HcCCcEEEe-ccccc-cccchhhhhhhcccccC
Confidence            567899997 589999999888889999999999987764332    234433322 22222 22344555566655567


Q ss_pred             ccEEEecCCCCC
Q 033396           92 LNILVSSAQLPY  103 (120)
Q Consensus        92 id~li~~ag~~~  103 (120)
                      +|++|.++|...
T Consensus        99 ~D~vid~~g~~~  110 (170)
T d1e3ja2          99 PNVTIDCSGNEK  110 (170)
T ss_dssp             CSEEEECSCCHH
T ss_pred             CceeeecCCChH
Confidence            999999998754

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.20  E-value=5.1e-06  Score=49.67  Aligned_cols=60  Identities=13%  Similarity=0.092  Sum_probs=48.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHH
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKL   80 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   80 (120)
                      .++|.|+ |.+|+.+++.|.+.|..|++++.+++..+...+++     ...++.+|.++++.++++
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~-----~~~vi~Gd~~~~~~l~~~   61 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDA   61 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHT
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh-----hhhhccCcccchhhhhhc
Confidence            5788887 99999999999999999999999988776554432     245677899998865544

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=98.16  E-value=3.3e-05  Score=48.34  Aligned_cols=85  Identities=15%  Similarity=0.183  Sum_probs=55.5

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      -.|.+++|+|+ |++|...+..+...|+ +|+++++++.+++.. ++   .|.... +...-.+..+..+.+.+....  
T Consensus        27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~---lGa~~v-i~~~~~~~~~~~~~i~~~~~~--   98 (182)
T d1vj0a2          27 FAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EE---IGADLT-LNRRETSVEERRKAIMDITHG--   98 (182)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HH---TTCSEE-EETTTSCHHHHHHHHHHHTTT--
T ss_pred             CCCCEEEEECC-Cccchhheeccccccccccccccccccccccc-cc---ccceEE-EeccccchHHHHHHHHHhhCC--
Confidence            36889999997 8999999998888997 799999998776433 32   354332 222222323333333332222  


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                      .++|++|.++|...
T Consensus        99 ~g~Dvvid~vG~~~  112 (182)
T d1vj0a2          99 RGADFILEATGDSR  112 (182)
T ss_dssp             SCEEEEEECSSCTT
T ss_pred             CCceEEeecCCchh
Confidence            35999999998765

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.11  E-value=8.1e-06  Score=51.07  Aligned_cols=79  Identities=18%  Similarity=0.220  Sum_probs=54.9

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC-C
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD-G   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-g   90 (120)
                      ++.+++|+||++++|...+......|++|+.+.+++++.+    .+++.|....   .|..+++-.+    ++.+..+ .
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~----~l~~~Ga~~v---i~~~~~~~~~----~v~~~t~~~   93 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE----MLSRLGVEYV---GDSRSVDFAD----EILELTDGY   93 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH----HHHTTCCSEE---EETTCSTHHH----HHHHHTTTC
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccc----cccccccccc---ccCCccCHHH----HHHHHhCCC
Confidence            4789999999999999999988889999999988765543    2334454432   2445544222    2333221 4


Q ss_pred             cccEEEecCCC
Q 033396           91 KLNILVSSAQL  101 (120)
Q Consensus        91 ~id~li~~ag~  101 (120)
                      ++|+++.++|-
T Consensus        94 g~d~v~d~~g~  104 (183)
T d1pqwa_          94 GVDVVLNSLAG  104 (183)
T ss_dssp             CEEEEEECCCT
T ss_pred             CEEEEEecccc
Confidence            69999999984

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=98.06  E-value=2.1e-05  Score=48.90  Aligned_cols=77  Identities=12%  Similarity=0.239  Sum_probs=57.9

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ..+++|.++|.|+ ||-+++++..|.+.|.+|.++.|+.++.+++.+.+...+ .+..+.  ..+.            ..
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~-~~~~~~--~~~~------------~~   77 (170)
T d1nyta1          14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQALS--MDEL------------EG   77 (170)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEEECC--SGGG------------TT
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc-cccccc--cccc------------cc
Confidence            4578999999998 888999999999999999999999988888877765544 233322  2111            11


Q ss_pred             CCcccEEEecCCCC
Q 033396           89 DGKLNILVSSAQLP  102 (120)
Q Consensus        89 ~g~id~li~~ag~~  102 (120)
                       ...|++||+..+.
T Consensus        78 -~~~dliIN~Tp~G   90 (170)
T d1nyta1          78 -HEFDLIINATSSG   90 (170)
T ss_dssp             -CCCSEEEECCSCG
T ss_pred             -cccceeecccccC
Confidence             4689999998553

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=7.5e-05  Score=46.16  Aligned_cols=83  Identities=20%  Similarity=0.203  Sum_probs=56.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .+.+++|.|+ |++|...+..+...|+ +|+++++++.+++.. ++   .|... .+..+-.+.....   +.+....+.
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a-~~---~Ga~~-~~~~~~~~~~~~~---~~~~~~~g~   96 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KE---IGADL-VLQISKESPQEIA---RKVEGQLGC   96 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HH---TTCSE-EEECSSCCHHHHH---HHHHHHHTS
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH-HH---hCCcc-ccccccccccccc---ccccccCCC
Confidence            4678999987 9999999998888998 799999998776533 22   35443 3333334444433   333334435


Q ss_pred             cccEEEecCCCCC
Q 033396           91 KLNILVSSAQLPY  103 (120)
Q Consensus        91 ~id~li~~ag~~~  103 (120)
                      ++|++|.++|...
T Consensus        97 g~Dvvid~~G~~~  109 (171)
T d1pl8a2          97 KPEVTIECTGAEA  109 (171)
T ss_dssp             CCSEEEECSCCHH
T ss_pred             CceEEEeccCCch
Confidence            7899999998744

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.00  E-value=7.2e-06  Score=54.36  Aligned_cols=30  Identities=30%  Similarity=0.397  Sum_probs=27.1

Q ss_pred             EEEecCCCchHHHHHHHHHHCCC-EEEEeeC
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGA-IVHTCSR   45 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~-~v~~~~~   45 (120)
                      +|||||+|.||+.++++|+++|+ .|+.+++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~   32 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDN   32 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEEC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEEC
Confidence            79999999999999999999996 6888764

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.97  E-value=5.6e-05  Score=47.11  Aligned_cols=78  Identities=12%  Similarity=0.219  Sum_probs=58.7

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ..+++|.++|.|+ ||.+++++..|.+.+.+|+++.|+.++.+...+.+.... .+..+..|..              ..
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~-~~~~~~~~~~--------------~~   77 (171)
T d1p77a1          14 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQAVSMDSI--------------PL   77 (171)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGGGC--------------CC
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc-ccchhhhccc--------------cc
Confidence            4578999999987 788999999999988999999999988888888776543 3444443321              12


Q ss_pred             CCcccEEEecCCCCC
Q 033396           89 DGKLNILVSSAQLPY  103 (120)
Q Consensus        89 ~g~id~li~~ag~~~  103 (120)
                       ...|++||++.+.-
T Consensus        78 -~~~diiIN~tp~g~   91 (171)
T d1p77a1          78 -QTYDLVINATSAGL   91 (171)
T ss_dssp             -SCCSEEEECCCC--
T ss_pred             -cccceeeecccccc
Confidence             57899999987643

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.97  E-value=2.5e-05  Score=48.59  Aligned_cols=76  Identities=18%  Similarity=0.232  Sum_probs=52.4

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      -.+.+++|+|++|++|...+......|++|+.+++++.+.+..    ++.|....+   |..+.      .++... . .
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~----~~lGa~~~i---~~~~~------~~~~~~-~-~   90 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP----LALGAEEAA---TYAEV------PERAKA-W-G   90 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH----HHTTCSEEE---EGGGH------HHHHHH-T-T
T ss_pred             CCCCEEEEEeccccchhhhhhhhcccccccccccccccccccc----cccccceee---ehhhh------hhhhhc-c-c
Confidence            3688999999999999999998888999999999887655432    233544332   33321      122222 2 5


Q ss_pred             cccEEEecCCC
Q 033396           91 KLNILVSSAQL  101 (120)
Q Consensus        91 ~id~li~~ag~  101 (120)
                      ++|+++.+.|-
T Consensus        91 g~D~v~d~~G~  101 (171)
T d1iz0a2          91 GLDLVLEVRGK  101 (171)
T ss_dssp             SEEEEEECSCT
T ss_pred             cccccccccch
Confidence            79999998873

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.95  E-value=9.6e-06  Score=48.36  Aligned_cols=74  Identities=18%  Similarity=0.142  Sum_probs=53.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      |.++|.|+ |-+|+.++++|.+.|.+|++++.+++..++.    ...+.  ..+.+|.++++.+.++-      . ...|
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~----~~~~~--~~~~gd~~~~~~l~~a~------i-~~a~   66 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----ASYAT--HAVIANATEENELLSLG------I-RNFE   66 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHT----TTTCS--EEEECCTTCTTHHHHHT------G-GGCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHH----HHhCC--cceeeecccchhhhccC------C-cccc
Confidence            44677776 8999999999999999999999998776543    23343  35568999988665541      1 3467


Q ss_pred             EEEecCCC
Q 033396           94 ILVSSAQL  101 (120)
Q Consensus        94 ~li~~ag~  101 (120)
                      .+|...+-
T Consensus        67 ~vi~~~~~   74 (134)
T d2hmva1          67 YVIVAIGA   74 (134)
T ss_dssp             EEEECCCS
T ss_pred             EEEEEcCc
Confidence            76666553

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.93  E-value=7.7e-06  Score=51.51  Aligned_cols=82  Identities=18%  Similarity=0.084  Sum_probs=54.5

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .++.++||+||+||+|...+......|++|+.+.+++.+.+.+    ++.|.....   |-++.  .....   ....++
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~----~~lGa~~vi---~~~~~--~~~~~---~~~~~~   97 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL----RVLGAKEVL---AREDV--MAERI---RPLDKQ   97 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH----HHTTCSEEE---ECC--------------CCSC
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHH----Hhcccceee---ecchh--HHHHH---HHhhcc
Confidence            4678999999999999999988888999999999887665433    234554433   22221  11122   122226


Q ss_pred             cccEEEecCCCCCc
Q 033396           91 KLNILVSSAQLPYS  104 (120)
Q Consensus        91 ~id~li~~ag~~~~  104 (120)
                      ++|+++.+.|-..+
T Consensus        98 gvD~vid~vgg~~~  111 (176)
T d1xa0a2          98 RWAAAVDPVGGRTL  111 (176)
T ss_dssp             CEEEEEECSTTTTH
T ss_pred             CcCEEEEcCCchhH
Confidence            89999999997664

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.89  E-value=7.7e-05  Score=45.98  Aligned_cols=82  Identities=13%  Similarity=0.131  Sum_probs=55.1

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .+.+++|.|++|++|...+..+...| .+|+++++++.+.+... +   .|... .+  |.++.+..+++.+..   .++
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~-~---~Ga~~-~i--~~~~~~~~~~~~~~~---~~~   96 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-R---AGADY-VI--NASMQDPLAEIRRIT---ESK   96 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-H---HTCSE-EE--ETTTSCHHHHHHHHT---TTS
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH-H---cCCce-ee--ccCCcCHHHHHHHHh---hcc
Confidence            56789999999999999999888888 58999998876654332 2   35433 22  334433333333222   225


Q ss_pred             cccEEEecCCCCC
Q 033396           91 KLNILVSSAQLPY  103 (120)
Q Consensus        91 ~id~li~~ag~~~  103 (120)
                      .+|++|.++|...
T Consensus        97 ~~d~vid~~g~~~  109 (170)
T d1jvba2          97 GVDAVIDLNNSEK  109 (170)
T ss_dssp             CEEEEEESCCCHH
T ss_pred             cchhhhcccccch
Confidence            6999999998643

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.84  E-value=2.4e-05  Score=42.64  Aligned_cols=41  Identities=27%  Similarity=0.332  Sum_probs=36.1

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHH
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN   51 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~   51 (120)
                      .++.+++|+|++||+|...+..+...|++|+.+.+++++.+
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~   70 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHE   70 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHH
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHH
Confidence            46889999999999999999988889999999988876654

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.84  E-value=4.6e-05  Score=48.00  Aligned_cols=79  Identities=13%  Similarity=0.138  Sum_probs=51.1

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCE-EEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      +.+++|+||+|++|...+......|++ |+.++++++.......++   +....   .|.++++ +.+.++++.   +..
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~---gad~v---i~~~~~~-~~~~~~~~~---~~G  100 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL---GFDAA---VNYKTGN-VAEQLREAC---PGG  100 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS---CCSEE---EETTSSC-HHHHHHHHC---TTC
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc---cceEE---eeccchh-HHHHHHHHh---ccC
Confidence            478999999999999998888779976 444566655544444332   44332   2444433 333343332   246


Q ss_pred             ccEEEecCCC
Q 033396           92 LNILVSSAQL  101 (120)
Q Consensus        92 id~li~~ag~  101 (120)
                      +|+++.+.|-
T Consensus       101 vDvv~D~vGg  110 (187)
T d1vj1a2         101 VDVYFDNVGG  110 (187)
T ss_dssp             EEEEEESSCH
T ss_pred             ceEEEecCCc
Confidence            9999999974

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.74  E-value=2.2e-05  Score=48.87  Aligned_cols=80  Identities=18%  Similarity=0.081  Sum_probs=51.9

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHH-HhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETV-SSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~~~~   89 (120)
                      .++.++||+||+||+|...+......|++|+.+.+++++.+.+.    +.|.......      +   ...++. ....+
T Consensus        22 ~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~----~lGad~vi~~------~---~~~~~~~~~~~~   88 (167)
T d1tt7a2          22 PEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK----QLGASEVISR------E---DVYDGTLKALSK   88 (167)
T ss_dssp             GGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH----HHTCSEEEEH------H---HHCSSCCCSSCC
T ss_pred             CCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHH----hhcccceEec------c---chhchhhhcccC
Confidence            35668999999999999999887779999999999876654332    2354433211      1   111111 11223


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                      +++|+++.+.|-..
T Consensus        89 ~gvd~vid~vgg~~  102 (167)
T d1tt7a2          89 QQWQGAVDPVGGKQ  102 (167)
T ss_dssp             CCEEEEEESCCTHH
T ss_pred             CCceEEEecCcHHH
Confidence            56888888887543

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.73  E-value=0.00033  Score=43.58  Aligned_cols=83  Identities=13%  Similarity=0.134  Sum_probs=54.7

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      -.+.+++|.|+ |++|...+..+...| .+|+.+++++++++...+    .|....+..-|-.+.  .+.+.+..   .+
T Consensus        28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~----~GA~~~in~~~~~~~--~~~~~~~~---~g   97 (176)
T d1d1ta2          28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA----VGATECISPKDSTKP--ISEVLSEM---TG   97 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----HTCSEEECGGGCSSC--HHHHHHHH---HT
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh----cCCcEEECccccchH--HHHHHHHh---cc
Confidence            35789999986 899999999999999 589999999888763332    255444333332221  12222211   12


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                      +.+|++|.+.|...
T Consensus        98 ~G~d~vi~~~g~~~  111 (176)
T d1d1ta2          98 NNVGYTFEVIGHLE  111 (176)
T ss_dssp             SCCCEEEECSCCHH
T ss_pred             ccceEEEEeCCchH
Confidence            57899999888643

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.72  E-value=0.00013  Score=47.39  Aligned_cols=80  Identities=21%  Similarity=0.247  Sum_probs=55.5

Q ss_pred             cccCcEEEEecCC----------------CchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCC
Q 033396           10 SLKGMTALVTGGT----------------KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKI   73 (120)
Q Consensus        10 ~~~~~~~litGa~----------------~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   73 (120)
                      +++|+.+|||+|.                |-.|.++|+++..+|+.|.++......         .....+..+  .+.+
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~---------~~p~~~~~~--~~~t   71 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL---------PTPPFVKRV--DVMT   71 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC---------CCCTTEEEE--ECCS
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc---------Ccccccccc--eehh
Confidence            5789999999765                669999999999999999988654311         011223333  3555


Q ss_pred             HHHHHHHHHHHHhhcCCcccEEEecCCCCCc
Q 033396           74 RAQREKLMETVSSQFDGKLNILVSSAQLPYS  104 (120)
Q Consensus        74 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  104 (120)
                      .+++...+.+   .+ ...|++|.+|.+..+
T Consensus        72 ~~~m~~~~~~---~~-~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          72 ALEMEAAVNA---SV-QQQNIFIGCAAVADY   98 (223)
T ss_dssp             HHHHHHHHHH---HG-GGCSEEEECCBCCSE
T ss_pred             hHHHHHHHHh---hh-ccceeEeeeechhhh
Confidence            5555544433   33 467999999999885

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.68  E-value=0.00012  Score=45.50  Aligned_cols=81  Identities=10%  Similarity=0.068  Sum_probs=52.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .+.+++|.|+ |++|...+..+...|+ +|+.+++++.+++... ++   |... +  .|.++.+..++ +.+....  .
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~l---Ga~~-~--i~~~~~~~~~~-v~~~t~g--~   95 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FY---GATD-I--LNYKNGHIEDQ-VMKLTNG--K   95 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HH---TCSE-E--ECGGGSCHHHH-HHHHTTT--S
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hh---Cccc-c--ccccchhHHHH-HHHHhhc--c
Confidence            5678889886 8999998888888996 6999999887654332 22   5332 2  24443332222 2222221  3


Q ss_pred             cccEEEecCCCCC
Q 033396           91 KLNILVSSAQLPY  103 (120)
Q Consensus        91 ~id~li~~ag~~~  103 (120)
                      .+|++|.++|...
T Consensus        96 G~D~vid~~g~~~  108 (174)
T d1jqba2          96 GVDRVIMAGGGSE  108 (174)
T ss_dssp             CEEEEEECSSCTT
T ss_pred             CcceEEEccCCHH
Confidence            5999999999765

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.65  E-value=0.00037  Score=42.77  Aligned_cols=76  Identities=16%  Similarity=0.238  Sum_probs=52.8

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .|.+++|.|+ |++|...+..+...|++++++++++++.+ ..+++   |....   .|..+.+...       ... ++
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~-~a~~l---Gad~~---i~~~~~~~~~-------~~~-~~   93 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AAKAL---GADEV---VNSRNADEMA-------AHL-KS   93 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHH---TCSEE---EETTCHHHHH-------TTT-TC
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHH-HHhcc---CCcEE---EECchhhHHH-------Hhc-CC
Confidence            5788999986 89999988888889999999998877653 23333   54332   3455544221       112 57


Q ss_pred             ccEEEecCCCCC
Q 033396           92 LNILVSSAQLPY  103 (120)
Q Consensus        92 id~li~~ag~~~  103 (120)
                      +|.+|.++|...
T Consensus        94 ~D~vid~~g~~~  105 (168)
T d1uufa2          94 FDFILNTVAAPH  105 (168)
T ss_dssp             EEEEEECCSSCC
T ss_pred             Cceeeeeeecch
Confidence            999999998765

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.61  E-value=0.00035  Score=43.16  Aligned_cols=83  Identities=20%  Similarity=0.232  Sum_probs=55.1

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      -.|.+++|.|+ +|+|...+..+...| .+|+.+++++.+.+...    +.+....+...+..  +.+.+..+...   +
T Consensus        27 k~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~----~~Ga~~~i~~~~~~--~~~~~~~~~~~---~   96 (176)
T d2jhfa2          27 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK----EVGATECVNPQDYK--KPIQEVLTEMS---N   96 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----HTTCSEEECGGGCS--SCHHHHHHHHT---T
T ss_pred             CCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHH----HhCCeeEEecCCch--hHHHHHHHHHh---c
Confidence            36779999999 689999999999988 58999999887765332    23544333222322  22333333332   2


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                      +.+|++|.+.|...
T Consensus        97 ~G~D~vid~~G~~~  110 (176)
T d2jhfa2          97 GGVDFSFEVIGRLD  110 (176)
T ss_dssp             SCBSEEEECSCCHH
T ss_pred             CCCCEEEecCCchh
Confidence            57899999998754

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.57  E-value=0.00062  Score=41.21  Aligned_cols=77  Identities=9%  Similarity=0.063  Sum_probs=52.6

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHh---cCCeEEEEeccCCCHHHHHHHHHHHH
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKS---KGLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      .+.+.+.|.|+ |.+|..++..|+..|  .+|+++|+++...+....+++.   ..........|..             
T Consensus         3 ~~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~-------------   68 (146)
T d1ez4a1           3 PNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYS-------------   68 (146)
T ss_dssp             TTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGG-------------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHH-------------
Confidence            34557888896 999999999999988  5899999998766544444432   2233344444431             


Q ss_pred             hhcCCcccEEEecCCCCC
Q 033396           86 SQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~  103 (120)
                       .. ...|++|.++|...
T Consensus        69 -~~-~~adivvitag~~~   84 (146)
T d1ez4a1          69 -DC-KDADLVVITAGAPQ   84 (146)
T ss_dssp             -GG-TTCSEEEECCCC--
T ss_pred             -Hh-ccccEEEEeccccc
Confidence             12 56899999999876

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.55  E-value=0.00039  Score=42.04  Aligned_cols=75  Identities=11%  Similarity=0.060  Sum_probs=54.3

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccEE
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNIL   95 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~l   95 (120)
                      ++|.|. +-+|..++++|.+.|.+|++++.+++......++....  .+.++.+|.++++.++++-      . ...+.+
T Consensus         6 iII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~--~~~vi~Gd~~d~~~L~~a~------i-~~a~~v   75 (153)
T d1id1a_           6 FIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGD--NADVIPGDSNDSSVLKKAG------I-DRCRAI   75 (153)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCT--TCEEEESCTTSHHHHHHHT------T-TTCSEE
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcC--CcEEEEccCcchHHHHHhc------c-ccCCEE
Confidence            677777 79999999999999999999999887655555554433  4567789999988665542      1 345666


Q ss_pred             EecCC
Q 033396           96 VSSAQ  100 (120)
Q Consensus        96 i~~ag  100 (120)
                      |...+
T Consensus        76 i~~~~   80 (153)
T d1id1a_          76 LALSD   80 (153)
T ss_dssp             EECSS
T ss_pred             EEccc
Confidence            65543

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.54  E-value=0.00074  Score=41.18  Aligned_cols=40  Identities=23%  Similarity=0.318  Sum_probs=34.0

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQ   52 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~   52 (120)
                      .+.+++|.|+ |++|...+..+...|++|+.+++++.+++.
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~   66 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLEL   66 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHh
Confidence            5778999886 999999888888899999999999877643

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.52  E-value=0.00033  Score=43.33  Aligned_cols=80  Identities=16%  Similarity=0.208  Sum_probs=51.7

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCE-EEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .+.+++|.|+ |++|...+..+...|++ |+++++++.+++.. +++   |... ++  |.++++ +   .+++.+..++
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a-~~~---Ga~~-~i--~~~~~~-~---~~~i~~~t~g   95 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL---GATH-VI--NSKTQD-P---VAAIKEITDG   95 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH---TCSE-EE--ETTTSC-H---HHHHHHHTTS
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHH-HHc---CCeE-EE--eCCCcC-H---HHHHHHHcCC
Confidence            5778999987 89999999888788865 55667777665433 233   4322 22  344433 2   2333333336


Q ss_pred             cccEEEecCCCCC
Q 033396           91 KLNILVSSAQLPY  103 (120)
Q Consensus        91 ~id~li~~ag~~~  103 (120)
                      ++|++|.++|...
T Consensus        96 g~D~vid~~G~~~  108 (174)
T d1f8fa2          96 GVNFALESTGSPE  108 (174)
T ss_dssp             CEEEEEECSCCHH
T ss_pred             CCcEEEEcCCcHH
Confidence            7999999998754

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.52  E-value=0.0007  Score=41.53  Aligned_cols=77  Identities=19%  Similarity=0.130  Sum_probs=50.7

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+.+++|.|+ |++|...+..+...|++|+.+++++.+++.. .+   .|....+...+-.  + .   .+   +.. +.
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a-~~---lGa~~~i~~~~~~--~-~---~~---~~~-~~   91 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA-MK---MGADHYIATLEEG--D-W---GE---KYF-DT   91 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH-HH---HTCSEEEEGGGTS--C-H---HH---HSC-SC
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh-hc---cCCcEEeeccchH--H-H---HH---hhh-cc
Confidence            5788999987 8999998887777999999999988766433 22   3544333222211  1 1   11   112 57


Q ss_pred             ccEEEecCCCCC
Q 033396           92 LNILVSSAQLPY  103 (120)
Q Consensus        92 id~li~~ag~~~  103 (120)
                      +|.++.+++...
T Consensus        92 ~d~vi~~~~~~~  103 (168)
T d1piwa2          92 FDLIVVCASSLT  103 (168)
T ss_dssp             EEEEEECCSCST
T ss_pred             cceEEEEecCCc
Confidence            899998877654

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.51  E-value=0.0002  Score=44.18  Aligned_cols=42  Identities=21%  Similarity=0.095  Sum_probs=36.1

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHH
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQ   55 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~   55 (120)
                      .|++.|.|+ |.+|.+++..|++.|+.|.+++|++...+...+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~   42 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   42 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            367888988 999999999999999999999999877655443

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.44  E-value=0.00092  Score=40.22  Aligned_cols=39  Identities=18%  Similarity=0.164  Sum_probs=34.0

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE   49 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~   49 (120)
                      ..=+.+.|.|+.|.+|..+++.|.+.|++|.+.+++...
T Consensus         7 ~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~   45 (152)
T d2pv7a2           7 SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA   45 (152)
T ss_dssp             TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG
T ss_pred             CCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccc
Confidence            344579999999999999999999999999999997644

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.40  E-value=0.0013  Score=40.60  Aligned_cols=88  Identities=13%  Similarity=0.166  Sum_probs=58.6

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHH---------------HHhcCCeEEEEeccCCCHHHHH
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE---------------WKSKGLQVSGNACDLKIRAQRE   78 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~D~~~~~~~~   78 (120)
                      +++-|.|. |.+|.++++.|++.|++|++++|+++..+++.+.               +...-.....+...+.+.+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~   81 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD   81 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence            44666776 8999999999999999999999998877665432               1111111122333456667777


Q ss_pred             HHHHHHHhhcCCcccEEEecCCCCC
Q 033396           79 KLMETVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        79 ~~~~~~~~~~~g~id~li~~ag~~~  103 (120)
                      .+++.+.... .+=+++|...-...
T Consensus        82 ~v~~~l~~~~-~~g~iiid~sT~~~  105 (176)
T d2pgda2          82 NFIEKLVPLL-DIGDIIIDGGNSEY  105 (176)
T ss_dssp             HHHHHHHHHC-CTTCEEEECSCCCH
T ss_pred             HHHHHHHhcc-ccCcEEEecCcchh
Confidence            7777777665 44467777665544

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.40  E-value=0.0023  Score=39.26  Aligned_cols=80  Identities=13%  Similarity=0.077  Sum_probs=54.6

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHh----cCCeEEEEeccCCCHHHHHHHH
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKS----KGLQVSGNACDLKIRAQREKLM   81 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~   81 (120)
                      ......+.+.|.|+ |.+|..++..++..|  .+++++|.+++..+....++..    .+........|..+       +
T Consensus        15 ~~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~-------~   86 (160)
T d1i0za1          15 EATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSV-------T   86 (160)
T ss_dssp             CCCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGG-------G
T ss_pred             cccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhh-------c
Confidence            33345567777896 999999999999998  4799999988766555544432    13333332333322       1


Q ss_pred             HHHHhhcCCcccEEEecCCCCC
Q 033396           82 ETVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        82 ~~~~~~~~g~id~li~~ag~~~  103 (120)
                              ..-|++|..||...
T Consensus        87 --------~~adiVVitAg~~~  100 (160)
T d1i0za1          87 --------ANSKIVVVTAGVRQ  100 (160)
T ss_dssp             --------TTCSEEEECCSCCC
T ss_pred             --------ccccEEEEecCCcc
Confidence                    56899999999876

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.38  E-value=0.0032  Score=38.18  Aligned_cols=82  Identities=13%  Similarity=0.084  Sum_probs=55.9

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH---------Hh-cCCeEEEEeccCCCHHHHHHHHHHHH
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW---------KS-KGLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---------~~-~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      +.|.|+ |.+|.++++.|.+.|++|+.++|+++..++..+.-         +. ...++.++..   .+..++++++++.
T Consensus         3 I~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l~   78 (165)
T d2f1ka2           3 IGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKLI   78 (165)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHHG
T ss_pred             EEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhhh
Confidence            566666 99999999999999999999999987665443311         11 1344444332   3467888888887


Q ss_pred             hhcCCcccEEEecCCCC
Q 033396           86 SQFDGKLNILVSSAQLP  102 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~  102 (120)
                      ..+ .+=.+++..++..
T Consensus        79 ~~l-~~~~iv~~~~s~~   94 (165)
T d2f1ka2          79 PHL-SPTAIVTDVASVK   94 (165)
T ss_dssp             GGS-CTTCEEEECCSCC
T ss_pred             hhc-ccccceeeccccc
Confidence            766 4445666666553

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.38  E-value=0.0002  Score=44.78  Aligned_cols=43  Identities=26%  Similarity=0.286  Sum_probs=36.3

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR   53 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~   53 (120)
                      ..+.+++|+||+||+|...+......|++|+.+.+++++.+.+
T Consensus        30 ~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~   72 (177)
T d1o89a2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (177)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence            3456899999999999999988888999999999988775433

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=97.37  E-value=0.0018  Score=40.03  Aligned_cols=83  Identities=13%  Similarity=0.099  Sum_probs=52.7

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      -.+.+++|.|+ |++|...+..+...|+ +|+++++++.+++ ..++   .|.... +...-.+ +..........   +
T Consensus        27 ~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~-~a~~---~Ga~~~-i~~~~~~-~~~~~~~~~~~---~   96 (174)
T d1e3ia2          27 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFP-KAKA---LGATDC-LNPRELD-KPVQDVITELT---A   96 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHH---TTCSEE-ECGGGCS-SCHHHHHHHHH---T
T ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHH-HHHH---hCCCcc-cCCccch-hhhhhhHhhhh---c
Confidence            35678999975 9999999999999997 5888888887653 2222   354332 2211111 12233332222   2


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                      +.+|++|.++|...
T Consensus        97 ~G~d~vie~~G~~~  110 (174)
T d1e3ia2          97 GGVDYSLDCAGTAQ  110 (174)
T ss_dssp             SCBSEEEESSCCHH
T ss_pred             CCCcEEEEecccch
Confidence            67999999998854

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.37  E-value=0.0009  Score=41.03  Aligned_cols=83  Identities=20%  Similarity=0.250  Sum_probs=52.0

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      -.|.+++|.|+ +|+|...+..+...|+ +|+.+++++.+++ ..+++   |....+..-+-  .+...+.+.+..   +
T Consensus        27 ~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~-~ak~l---Ga~~~i~~~~~--~~~~~~~~~~~~---~   96 (176)
T d2fzwa2          27 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFA-RAKEF---GATECINPQDF--SKPIQEVLIEMT---D   96 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH-HHHHH---TCSEEECGGGC--SSCHHHHHHHHT---T
T ss_pred             CCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHH-HHHHh---CCcEEEeCCch--hhHHHHHHHHHc---C
Confidence            35778999998 5899999888888885 5777777776654 33333   54333222121  122333443332   2


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                      +.+|++|.++|...
T Consensus        97 ~g~D~vid~~G~~~  110 (176)
T d2fzwa2          97 GGVDYSFECIGNVK  110 (176)
T ss_dssp             SCBSEEEECSCCHH
T ss_pred             CCCcEeeecCCCHH
Confidence            57999999998644

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.35  E-value=0.0011  Score=40.11  Aligned_cols=78  Identities=17%  Similarity=0.109  Sum_probs=53.9

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHh----cCCeEEEEeccCCCHHHHHHHHHHH
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKS----KGLQVSGNACDLKIRAQREKLMETV   84 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~   84 (120)
                      -.++.+.|.|+ |.+|..++..++..+  .+++++|+++..++....++..    ....+.....|..            
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~------------   70 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYD------------   70 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGG------------
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHH------------
Confidence            35667888897 999999999999987  4799999988765544444442    1333333333331            


Q ss_pred             HhhcCCcccEEEecCCCCCc
Q 033396           85 SSQFDGKLNILVSSAQLPYS  104 (120)
Q Consensus        85 ~~~~~g~id~li~~ag~~~~  104 (120)
                        .+ ..-|++|.++|....
T Consensus        71 --~l-~daDvvvitag~~~~   87 (148)
T d1ldna1          71 --DC-RDADLVVICAGANQK   87 (148)
T ss_dssp             --GT-TTCSEEEECCSCCCC
T ss_pred             --Hh-ccceeEEEecccccc
Confidence              12 467999999998773

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=97.29  E-value=0.001  Score=40.83  Aligned_cols=80  Identities=18%  Similarity=0.153  Sum_probs=50.9

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .+.+++|.|+ |++|...+..+...|+ +|+.+++++.+++...    ..+... ++  |.++ +.++..++..   .+.
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~----~~ga~~-~i--~~~~-~~~~~~~~~~---~~~   99 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE----RLGADH-VV--DARR-DPVKQVMELT---RGR   99 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH----HTTCSE-EE--ETTS-CHHHHHHHHT---TTC
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh----hcccce-ee--cCcc-cHHHHHHHhh---CCC
Confidence            4778999886 9999998888877785 6777788876554332    334432 22  3322 3344444322   114


Q ss_pred             cccEEEecCCCCC
Q 033396           91 KLNILVSSAQLPY  103 (120)
Q Consensus        91 ~id~li~~ag~~~  103 (120)
                      .+|++|.++|...
T Consensus       100 g~d~vid~~g~~~  112 (172)
T d1h2ba2         100 GVNVAMDFVGSQA  112 (172)
T ss_dssp             CEEEEEESSCCHH
T ss_pred             CceEEEEecCcch
Confidence            6999999999754

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.28  E-value=0.0017  Score=39.39  Aligned_cols=40  Identities=23%  Similarity=0.257  Sum_probs=33.4

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQ   52 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~   52 (120)
                      .+.+++|.|+ |++|...+..+...|++|+.+++++.+++.
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~   66 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLEL   66 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhh
Confidence            5778888875 899999888888899999999998877543

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=97.25  E-value=0.0018  Score=39.91  Aligned_cols=82  Identities=18%  Similarity=0.164  Sum_probs=52.8

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHH-HHHHHHHHHHhhc
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRA-QREKLMETVSSQF   88 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~   88 (120)
                      -.+.+++|.|+ |++|...+..+...|+ +|+.+++++.+++...    +.|....+   |.++.+ .+.+.....   .
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~----~lGa~~~i---~~~~~d~~~~~~~~~~---~   94 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI----ELGATECL---NPKDYDKPIYEVICEK---T   94 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH----HTTCSEEE---CGGGCSSCHHHHHHHH---T
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH----HcCCcEEE---cCCCchhHHHHHHHHh---c
Confidence            46778999986 8999999999988885 7989999887765332    23543332   222222 122222222   1


Q ss_pred             CCcccEEEecCCCCC
Q 033396           89 DGKLNILVSSAQLPY  103 (120)
Q Consensus        89 ~g~id~li~~ag~~~  103 (120)
                      ++.+|++|-++|...
T Consensus        95 ~~G~d~vid~~g~~~  109 (174)
T d1p0fa2          95 NGGVDYAVECAGRIE  109 (174)
T ss_dssp             TSCBSEEEECSCCHH
T ss_pred             CCCCcEEEEcCCCch
Confidence            256899988888743

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=97.22  E-value=0.0011  Score=41.85  Aligned_cols=80  Identities=18%  Similarity=0.256  Sum_probs=50.3

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .|.+++|.|+ |++|...+......|+ +|+++++++.+++..    ++.|....   .|-.+.+ +.+.+.+...  +.
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a----~~~Ga~~~---~~~~~~~-~~~~i~~~t~--g~   93 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA----KAQGFEIA---DLSLDTP-LHEQIAALLG--EP   93 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH----HHTTCEEE---ETTSSSC-HHHHHHHHHS--SS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhh----hhccccEE---EeCCCcC-HHHHHHHHhC--CC
Confidence            5779999986 8999887777767775 788889887766432    22354432   2333333 2222222222  14


Q ss_pred             cccEEEecCCCC
Q 033396           91 KLNILVSSAQLP  102 (120)
Q Consensus        91 ~id~li~~ag~~  102 (120)
                      .+|++|.+.|..
T Consensus        94 g~D~vid~vG~~  105 (195)
T d1kola2          94 EVDCAVDAVGFE  105 (195)
T ss_dssp             CEEEEEECCCTT
T ss_pred             CcEEEEECcccc
Confidence            699999999854

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=0.00066  Score=42.80  Aligned_cols=37  Identities=27%  Similarity=0.288  Sum_probs=32.5

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHH
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN   51 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~   51 (120)
                      |.+.|.|+ |-+|..+|..++..|++|++.+++++.++
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~   41 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILA   41 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHH
Confidence            46888888 88999999999999999999999986544

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=97.22  E-value=0.0023  Score=39.12  Aligned_cols=83  Identities=17%  Similarity=0.129  Sum_probs=51.0

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      -.+.+++|.|+ +++|...+..++..|+ +|+.+++++.+++...    +.|....+...+-.+  ...+.......   
T Consensus        27 k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~----~~GAd~~in~~~~~~--~~~~~~~~~~~---   96 (175)
T d1cdoa2          27 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK----VFGATDFVNPNDHSE--PISQVLSKMTN---   96 (175)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----HTTCCEEECGGGCSS--CHHHHHHHHHT---
T ss_pred             CCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH----HcCCcEEEcCCCcch--hHHHHHHhhcc---
Confidence            35778999986 7788888888888775 6888898887764332    335433322222211  12222222211   


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                      +.+|+++.++|...
T Consensus        97 ~G~d~vid~~G~~~  110 (175)
T d1cdoa2          97 GGVDFSLECVGNVG  110 (175)
T ss_dssp             SCBSEEEECSCCHH
T ss_pred             CCcceeeeecCCHH
Confidence            57999999998744

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.21  E-value=0.0028  Score=38.78  Aligned_cols=77  Identities=12%  Similarity=0.071  Sum_probs=53.4

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHh----cCCeEEEEeccCCCHHHHHHHHHHH
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKS----KGLQVSGNACDLKIRAQREKLMETV   84 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~   84 (120)
                      ++...+.|.|+ |.+|..++..|+..+  .+++++|.+++.++....++..    .+........|..            
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~------------   83 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYN------------   83 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGG------------
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchh------------
Confidence            45556778896 999999999999988  4799999998776555555542    1333333233332            


Q ss_pred             HhhcCCcccEEEecCCCCC
Q 033396           85 SSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        85 ~~~~~g~id~li~~ag~~~  103 (120)
                        .. ..-|++|..+|...
T Consensus        84 --~~-~~adivvitag~~~   99 (159)
T d2ldxa1          84 --VS-ANSKLVIITAGARM   99 (159)
T ss_dssp             --GG-TTEEEEEECCSCCC
T ss_pred             --hh-ccccEEEEeccccc
Confidence              11 56899999999866

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=97.11  E-value=0.0074  Score=37.51  Aligned_cols=38  Identities=24%  Similarity=0.203  Sum_probs=32.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR   53 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~   53 (120)
                      .+.|.|+ |-+|..+|..++..|++|++.+++++.+++.
T Consensus         6 ~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~   43 (186)
T d1wdka3           6 QAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQG   43 (186)
T ss_dssp             SEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhh
Confidence            4777888 8899999999999999999999997665433

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.08  E-value=0.00081  Score=41.66  Aligned_cols=48  Identities=21%  Similarity=0.190  Sum_probs=41.0

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS   59 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~   59 (120)
                      ++++|.++|.|+ ||.+++++..|.+.| +|.++.|+.++.+++.+.+..
T Consensus        15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~   62 (177)
T d1nvta1          15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAE   62 (177)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHH
Confidence            579999999988 778999999998777 999999999888877776654

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.05  E-value=0.0018  Score=39.03  Aligned_cols=77  Identities=14%  Similarity=0.053  Sum_probs=49.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           15 TALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      .+.|+||+|.+|.+++..|+.++  .++++.|.++.+.+  ...+....... .... .....+....+        ..-
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~--a~Dl~~~~~~~-~~~~-~~~~~~~~~~~--------~~a   69 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV--AADLSHIETRA-TVKG-YLGPEQLPDCL--------KGC   69 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH--HHHHTTSSSSC-EEEE-EESGGGHHHHH--------TTC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh--hHHHhhhhhhc-CCCe-EEcCCChHHHh--------CCC
Confidence            47899999999999999999988  46999998765432  22333211111 1111 11223333334        578


Q ss_pred             cEEEecCCCCC
Q 033396           93 NILVSSAQLPY  103 (120)
Q Consensus        93 d~li~~ag~~~  103 (120)
                      |++|..+|.+.
T Consensus        70 DivVitag~~~   80 (144)
T d1mlda1          70 DVVVIPAGVPR   80 (144)
T ss_dssp             SEEEECCSCCC
T ss_pred             CEEEECCCcCC
Confidence            99999999866

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.01  E-value=0.0016  Score=37.33  Aligned_cols=39  Identities=18%  Similarity=0.191  Sum_probs=34.3

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET   48 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~   48 (120)
                      .++++|.++|.|+ |.+|..-++.|++.|++|++.+....
T Consensus         8 l~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           8 CQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             ECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EEeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCC
Confidence            4689999999998 66999999999999999999877543

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.99  E-value=0.0029  Score=38.08  Aligned_cols=74  Identities=15%  Similarity=0.091  Sum_probs=50.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHh----cCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKS----KGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      |.+.|.|+ |.+|..++..++.+|  .++++.|.++..++....++..    ...+......|..              .
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~--------------~   66 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWA--------------A   66 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGG--------------G
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHH--------------H
Confidence            56778895 899999999999987  5799999988766544444432    2233333333321              1


Q ss_pred             cCCcccEEEecCCCCC
Q 033396           88 FDGKLNILVSSAQLPY  103 (120)
Q Consensus        88 ~~g~id~li~~ag~~~  103 (120)
                      + ..-|++|.++|...
T Consensus        67 l-~~adiVVitaG~~~   81 (146)
T d1hyha1          67 L-ADADVVISTLGNIK   81 (146)
T ss_dssp             G-TTCSEEEECCSCGG
T ss_pred             h-ccccEEEEeccccc
Confidence            1 46799999999764

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.95  E-value=0.00048  Score=38.32  Aligned_cols=79  Identities=13%  Similarity=0.204  Sum_probs=51.8

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++++|+++|.|. |.-|.++++.|+++|++|++.|.......  .+.+. .+..+  ...+.. ..    .+        
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~--~~~~~-~~~~~--~~~~~~-~~----~~--------   62 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPG--LDKLP-EAVER--HTGSLN-DE----WL--------   62 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTT--GGGSC-TTSCE--EESBCC-HH----HH--------
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchh--HHHHh-hccce--eecccc-hh----hh--------
Confidence            578999999998 55699999999999999999988653211  11111 12222  222221 11    12        


Q ss_pred             CcccEEEecCCCCCccce
Q 033396           90 GKLNILVSSAQLPYSQRK  107 (120)
Q Consensus        90 g~id~li~~ag~~~~~~~  107 (120)
                      ..+|.+|...|++..++.
T Consensus        63 ~~~d~vi~SPGi~~~~~~   80 (93)
T d2jfga1          63 MAADLIVASPGIALAHPS   80 (93)
T ss_dssp             HHCSEEEECTTSCTTSHH
T ss_pred             ccCCEEEECCCCCCCCHH
Confidence            357999999999876543

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.91  E-value=0.0013  Score=40.36  Aligned_cols=45  Identities=22%  Similarity=0.254  Sum_probs=38.3

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEW   57 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~   57 (120)
                      ++|.++|.|+ ||.+++++..|.+.|+ +|.++.|+.+..+.+.+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            6778999988 8999999999999995 6999999988877666544

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.90  E-value=0.0087  Score=37.01  Aligned_cols=80  Identities=11%  Similarity=0.020  Sum_probs=48.9

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCC-------EEEEeeCChH--HHHHHHHHHHhcCC-eEEEEeccCCCHHHHHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGA-------IVHTCSRNET--ELNQRIQEWKSKGL-QVSGNACDLKIRAQREKLM   81 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~-------~v~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~   81 (120)
                      +...+.||||+|.||.+++..|++...       .+.+.+....  .++....++..... ....+.. .++   ....+
T Consensus        23 ~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~-~~~---~~~~~   98 (175)
T d7mdha1          23 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI-GID---PYEVF   98 (175)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE-ESC---HHHHT
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccc-ccc---chhhc
Confidence            444699999999999999999998431       4556666543  34444444443321 1111111 122   12223


Q ss_pred             HHHHhhcCCcccEEEecCCCCC
Q 033396           82 ETVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        82 ~~~~~~~~g~id~li~~ag~~~  103 (120)
                              ...|++|..+|.+.
T Consensus        99 --------~~aDvVvi~ag~~r  112 (175)
T d7mdha1          99 --------EDVDWALLIGAKPR  112 (175)
T ss_dssp             --------TTCSEEEECCCCCC
T ss_pred             --------cCCceEEEeeccCC
Confidence                    67899999999976

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=96.88  E-value=0.0022  Score=40.36  Aligned_cols=84  Identities=15%  Similarity=0.100  Sum_probs=63.2

Q ss_pred             cCcEEE-EecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTAL-VTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~l-itGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .+..++ +|-|+||...++.+.+ . +.+|+.+|+++..++...+.+...+.++.++..+.++...+   +...  .. +
T Consensus        23 ~~~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~---~~~~--~~-~   94 (192)
T d1m6ya2          23 DEKIILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFL---LKTL--GI-E   94 (192)
T ss_dssp             TTCEEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHH---HHHT--TC-S
T ss_pred             CCCEEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHH---HHHc--CC-C
Confidence            344555 6778888888888876 3 46899999999998888887777788899999988775432   2221  12 6


Q ss_pred             cccEEEecCCCCC
Q 033396           91 KLNILVSSAQLPY  103 (120)
Q Consensus        91 ~id~li~~ag~~~  103 (120)
                      ++|.++.-.|+..
T Consensus        95 ~vdgIl~DlGvSs  107 (192)
T d1m6ya2          95 KVDGILMDLGVST  107 (192)
T ss_dssp             CEEEEEEECSCCH
T ss_pred             CcceeeeccchhH
Confidence            8999999999865

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.88  E-value=0.0098  Score=36.61  Aligned_cols=78  Identities=19%  Similarity=0.226  Sum_probs=59.2

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .++..++|.|+ |-.|.+-++.....|+.|.++|.+.+.++++......   ++.   .-.++++.+.+.+        .
T Consensus        30 v~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~---~~~---~~~~~~~~l~~~~--------~   94 (168)
T d1pjca1          30 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---RVE---LLYSNSAEIETAV--------A   94 (168)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GSE---EEECCHHHHHHHH--------H
T ss_pred             CCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcc---cce---eehhhhhhHHHhh--------c
Confidence            46778999988 7889999999999999999999999888766555432   222   2345666666555        3


Q ss_pred             cccEEEecCCCCC
Q 033396           91 KLNILVSSAQLPY  103 (120)
Q Consensus        91 ~id~li~~ag~~~  103 (120)
                      .-|++|.++-++.
T Consensus        95 ~aDivI~aalipG  107 (168)
T d1pjca1          95 EADLLIGAVLVPG  107 (168)
T ss_dssp             TCSEEEECCCCTT
T ss_pred             cCcEEEEeeecCC
Confidence            5799999998877

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.83  E-value=0.0064  Score=34.76  Aligned_cols=35  Identities=26%  Similarity=0.286  Sum_probs=30.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      .+|.++|.|| |.+|..+|..|++.|.+|.++.+.+
T Consensus        21 ~p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          21 VPKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCeEEEECC-CccceeeeeeecccccEEEEEEecc
Confidence            3467888887 8999999999999999999998764

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.79  E-value=0.0034  Score=42.00  Aligned_cols=23  Identities=26%  Similarity=0.069  Sum_probs=20.7

Q ss_pred             CchHHHHHHHHHHCCCEEEEeeC
Q 033396           23 KGIGYAVVEELAAFGAIVHTCSR   45 (120)
Q Consensus        23 ~~ig~~~a~~l~~~g~~v~~~~~   45 (120)
                      |-.|.++|+++..+|+.|+++.+
T Consensus        46 Gk~G~alA~~~~~~Ga~V~li~g   68 (290)
T d1p9oa_          46 GRRGATSAEAFLAAGYGVLFLYR   68 (290)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             hHHHHHHHHHHHHcCCEEEEEec
Confidence            56999999999999999998854

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=96.75  E-value=0.0061  Score=39.44  Aligned_cols=71  Identities=20%  Similarity=0.256  Sum_probs=51.7

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++++++++|-|- |.+|..+++.|.+.|++|+..+.+.........+.   +...       .++++   +       +.
T Consensus        36 ~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~---g~~~-------~~~~~---~-------~~   94 (230)
T d1leha1          36 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE---GADA-------VAPNA---I-------YG   94 (230)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CCEE-------CCGGG---T-------TT
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhc---CCcc-------cCCcc---c-------cc
Confidence            589999999987 88999999999999999999998877665554432   3221       11111   1       12


Q ss_pred             CcccEEEecCCC
Q 033396           90 GKLNILVSSAQL  101 (120)
Q Consensus        90 g~id~li~~ag~  101 (120)
                      -+.|+++.||--
T Consensus        95 ~~cDIl~PcA~~  106 (230)
T d1leha1          95 VTCDIFAPCALG  106 (230)
T ss_dssp             CCCSEEEECSCS
T ss_pred             ccccEecccccc
Confidence            578999999854

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.75  E-value=0.011  Score=35.38  Aligned_cols=74  Identities=12%  Similarity=0.054  Sum_probs=48.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC--CEEEEeeCCh--HHHHHHHHHHHh---cCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           15 TALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNE--TELNQRIQEWKS---KGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .+.|+|++|.+|..++..++.++  .++++.|.+.  +..+....++..   ...+......|..+              
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~~--------------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYED--------------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGG--------------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHHH--------------
Confidence            47789999999999999999988  4699998643  333323333332   23333333333321              


Q ss_pred             cCCcccEEEecCCCCC
Q 033396           88 FDGKLNILVSSAQLPY  103 (120)
Q Consensus        88 ~~g~id~li~~ag~~~  103 (120)
                      + ..-|++|..||.+.
T Consensus        68 ~-~~aDiVvitaG~~~   82 (142)
T d1o6za1          68 T-AGSDVVVITAGIPR   82 (142)
T ss_dssp             G-TTCSEEEECCCCCC
T ss_pred             h-hhcCEEEEeccccc
Confidence            2 46899999999866

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.74  E-value=0.0019  Score=39.91  Aligned_cols=44  Identities=23%  Similarity=0.316  Sum_probs=37.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR   53 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~   53 (120)
                      +++||.++|.|.+.-+|+.++..|.++|++|..+.+....+++.
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~   77 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHH   77 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHH
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHH
Confidence            57999999999999999999999999999999887765544433

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.74  E-value=0.0028  Score=40.24  Aligned_cols=42  Identities=26%  Similarity=0.388  Sum_probs=36.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQ   52 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~   52 (120)
                      +++||+++|-| .|.+|..+++.|.+.|++|++.+.+......
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~   65 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAH   65 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHH
Confidence            58999999998 4889999999999999999999988766543

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.72  E-value=0.013  Score=34.80  Aligned_cols=73  Identities=15%  Similarity=0.072  Sum_probs=48.1

Q ss_pred             EEEecCCCchHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhc----CCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           16 ALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKSK----GLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      +.|+|+ |.+|..++..++..+  .+++++|.++..++.....+...    ..+......  .+.+           .+ 
T Consensus         3 I~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~-----------~~-   67 (142)
T d1guza1           3 ITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYA-----------DT-   67 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGG-----------GG-
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHH-----------Hh-
Confidence            667796 999999999999988  58999999876654333333221    223333221  2211           12 


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                      ...|++|.++|.+.
T Consensus        68 ~dadvvvitag~~~   81 (142)
T d1guza1          68 ANSDIVIITAGLPR   81 (142)
T ss_dssp             TTCSEEEECCSCCC
T ss_pred             cCCeEEEEEEecCC
Confidence            56899999999866

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.68  E-value=0.0063  Score=35.23  Aligned_cols=34  Identities=18%  Similarity=0.198  Sum_probs=30.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      .|.++|.|| |.||..+|..|++.|++|.++.+.+
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            567888887 8999999999999999999998754

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=96.68  E-value=0.0052  Score=39.71  Aligned_cols=36  Identities=28%  Similarity=0.361  Sum_probs=31.0

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRN   46 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~   46 (120)
                      .++.++|+|.|+ ||+|..++..|+..| -++.++|.+
T Consensus        27 kL~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          27 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCc
Confidence            377889999996 899999999999999 578888754

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.68  E-value=0.0016  Score=40.42  Aligned_cols=42  Identities=29%  Similarity=0.406  Sum_probs=37.8

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN   51 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~   51 (120)
                      +++||.++|.|.+.-+|+.++..|+++|++|..+.+....+.
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~   77 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD   77 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence            579999999999999999999999999999999988665544

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.64  E-value=0.0037  Score=37.88  Aligned_cols=84  Identities=13%  Similarity=0.059  Sum_probs=52.9

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH-------Hh--cCCeEEEEeccCCCHHHHHHHHH---H
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW-------KS--KGLQVSGNACDLKIRAQREKLME---T   83 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-------~~--~~~~~~~~~~D~~~~~~~~~~~~---~   83 (120)
                      +-|.|. |.+|.++|+.|++.|++|+..+|++...++..+.-       .+  ...++.+  .=+.+++.++.++.   .
T Consensus         3 IgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii--~~v~~~~~v~~v~~~~~~   79 (161)
T d1vpda2           3 VGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVII--TMLPNSPHVKEVALGENG   79 (161)
T ss_dssp             EEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEE--ECCSSHHHHHHHHHSTTC
T ss_pred             EEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEE--EEcCCHHHHHHHHhCCcc
Confidence            445554 89999999999999999999999987766554311       11  1223332  33667777777762   2


Q ss_pred             HHhhcCCcccEEEecCCCCC
Q 033396           84 VSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        84 ~~~~~~g~id~li~~ag~~~  103 (120)
                      +.... .+=.++|.+.-...
T Consensus        80 ~~~~~-~~g~iiid~sT~~p   98 (161)
T d1vpda2          80 IIEGA-KPGTVLIDMSSIAP   98 (161)
T ss_dssp             HHHHC-CTTCEEEECSCCCH
T ss_pred             hhhcc-CCCCEEEECCCCCH
Confidence            33333 33356666655543

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=96.60  E-value=0.0093  Score=34.28  Aligned_cols=34  Identities=12%  Similarity=0.144  Sum_probs=30.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      .|.++|.|| |.+|.++|..|++.|.+|.++.|.+
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            577888887 8999999999999999999998753

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=96.57  E-value=0.0022  Score=40.71  Aligned_cols=36  Identities=28%  Similarity=0.247  Sum_probs=30.5

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      +-+.|.|+|.|| |-.|..+|.+|+++|++|.++++.
T Consensus         3 ~~~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           3 MHSQKRVVVLGS-GVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence            345667888887 888999999999999999999863

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.55  E-value=0.028  Score=33.50  Aligned_cols=77  Identities=10%  Similarity=0.064  Sum_probs=48.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC--CEEEEeeCChH--HHHHHHHHHHh----cCCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396           15 TALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNET--ELNQRIQEWKS----KGLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~~--~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      .+.|.||+|.+|..++..++.++  .+++++++++.  ..+....++..    ....+.....--.+.           +
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~-----------~   70 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL-----------R   70 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG-----------G
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchH-----------H
Confidence            37899999999999999999988  58999998752  23333333332    122222211111111           1


Q ss_pred             hcCCcccEEEecCCCCC
Q 033396           87 QFDGKLNILVSSAQLPY  103 (120)
Q Consensus        87 ~~~g~id~li~~ag~~~  103 (120)
                      .+ ..-|++|.+||.+.
T Consensus        71 ~l-~~aDvVVitAG~~~   86 (145)
T d1hyea1          71 II-DESDVVIITSGVPR   86 (145)
T ss_dssp             GG-TTCSEEEECCSCCC
T ss_pred             Hh-ccceEEEEeccccc
Confidence            12 56899999999876

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.53  E-value=0.014  Score=33.66  Aligned_cols=35  Identities=20%  Similarity=0.259  Sum_probs=30.6

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      ..+.++|.|| |.+|..+|..|.+.|.+|.++.+.+
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~   63 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQP   63 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeecc
Confidence            3678888887 8999999999999999999998764

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.52  E-value=0.014  Score=34.67  Aligned_cols=73  Identities=11%  Similarity=0.045  Sum_probs=48.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHh---cCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           15 TALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKS---KGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+.|.|+ |.+|..++..++..+  .++++.|.++..++....++..   ...+......|..+       +        
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~~~-------~--------   65 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYAD-------L--------   65 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGGG-------G--------
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcHHH-------h--------
Confidence            3567786 899999999998877  6799999998765544444332   12233333333211       1        


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                      ..-|++|.++|...
T Consensus        66 ~~adivvitag~~~   79 (140)
T d1a5za1          66 KGSDVVIVAAGVPQ   79 (140)
T ss_dssp             TTCSEEEECCCCCC
T ss_pred             cCCCEEEEeccccc
Confidence            46799999999876

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.52  E-value=0.019  Score=34.61  Aligned_cols=84  Identities=11%  Similarity=0.137  Sum_probs=50.8

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH-------Hh--cCCeEEEEeccCCCHHHHHHHHHHH--
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW-------KS--KGLQVSGNACDLKIRAQREKLMETV--   84 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-------~~--~~~~~~~~~~D~~~~~~~~~~~~~~--   84 (120)
                      +-+.| .|-+|.++|++|++.|++|.+.+|+....+.....-       .+  ...++  +..-+.+.+..+.++...  
T Consensus         4 Ig~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~di--ii~~v~~~~~~~~v~~~~~~   80 (162)
T d3cuma2           4 IAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADV--VISMLPASQHVEGLYLDDDG   80 (162)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSE--EEECCSCHHHHHHHHHSTTC
T ss_pred             EEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCe--eeecccchhhHHHHHhcccc
Confidence            45554 489999999999999999999999987765544311       11  12232  223356666666665432  


Q ss_pred             -HhhcCCcccEEEecCCCCC
Q 033396           85 -SSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        85 -~~~~~g~id~li~~ag~~~  103 (120)
                       .... .+=+++|.+..+..
T Consensus        81 ~~~~l-~~g~iiid~st~~p   99 (162)
T d3cuma2          81 LLAHI-APGTLVLECSTIAP   99 (162)
T ss_dssp             HHHHS-CTTCEEEECSCCCH
T ss_pred             ccccC-CCCCEEEECCCCCH
Confidence             2223 22245666555543

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.50  E-value=0.013  Score=33.98  Aligned_cols=34  Identities=18%  Similarity=0.235  Sum_probs=30.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      .|.++|.|+ |.+|..+|..|++.|.+|.++.|.+
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            477888887 7899999999999999999998863

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=96.48  E-value=0.0085  Score=34.48  Aligned_cols=35  Identities=23%  Similarity=0.114  Sum_probs=30.3

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      .++.++|.|+ |.||..+|..|++.|.+|.++.+..
T Consensus        21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          21 VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            4577888887 8999999999999999999997653

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.48  E-value=0.034  Score=33.44  Aligned_cols=84  Identities=8%  Similarity=0.006  Sum_probs=54.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHH-----------h-cCCeEEEEeccCCCHHHHHHH
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWK-----------S-KGLQVSGNACDLKIRAQREKL   80 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~--~v~~~~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~D~~~~~~~~~~   80 (120)
                      .+.|.|+ |.+|.++++.|.+.|.  +|+.+|++.+..+...+.-.           . ....+.++.   +-+..+.++
T Consensus         3 ~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila---~p~~~~~~v   78 (171)
T d2g5ca2           3 NVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS---SPVRTFREI   78 (171)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEEC---SCHHHHHHH
T ss_pred             EEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhcccccccccc---CCchhhhhh
Confidence            5788876 9999999999999984  68888998877655443210           0 122333322   334567778


Q ss_pred             HHHHHhhcCCcccEEEecCCCCC
Q 033396           81 METVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        81 ~~~~~~~~~g~id~li~~ag~~~  103 (120)
                      ++++...+ .+=.+++...++..
T Consensus        79 l~~l~~~~-~~~~ii~d~~s~k~  100 (171)
T d2g5ca2          79 AKKLSYIL-SEDATVTDQGSVKG  100 (171)
T ss_dssp             HHHHHHHS-CTTCEEEECCSCCT
T ss_pred             hhhhhccc-cccccccccccccH
Confidence            88877766 44456666666544

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.47  E-value=0.015  Score=36.48  Aligned_cols=75  Identities=12%  Similarity=0.177  Sum_probs=55.6

Q ss_pred             cccCcEEEEecCCCc-hHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           10 SLKGMTALVTGGTKG-IGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        10 ~~~~~~~litGa~~~-ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +++|+.++=-||+.| ++.    .++..| .+|+.++.++..++.+.+.++..+.+..++..|+.+.             
T Consensus        44 dl~g~~vLDlg~GtG~l~i----~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~-------------  106 (201)
T d1wy7a1          44 DIEGKVVADLGAGTGVLSY----GALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF-------------  106 (201)
T ss_dssp             SSTTCEEEEETCTTCHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC-------------
T ss_pred             CCCCCEEEECcCcchHHHH----HHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhh-------------
Confidence            468999998887655 433    345667 4799999999888777777777788888888887432             


Q ss_pred             cCCcccEEEecCCCC
Q 033396           88 FDGKLNILVSSAQLP  102 (120)
Q Consensus        88 ~~g~id~li~~ag~~  102 (120)
                       .+++|.+|.|.-+.
T Consensus       107 -~~~fD~Vi~nPP~~  120 (201)
T d1wy7a1         107 -NSRVDIVIMNPPFG  120 (201)
T ss_dssp             -CCCCSEEEECCCCS
T ss_pred             -CCcCcEEEEcCccc
Confidence             26899999887653

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.46  E-value=0.033  Score=33.14  Aligned_cols=73  Identities=15%  Similarity=0.097  Sum_probs=48.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHh---cCCeEEEE-eccCCCHHHHHHHHHHHHhhc
Q 033396           15 TALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKS---KGLQVSGN-ACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .+.|.|+ |.+|.+++..++.++  .++++.|.++...+.....++.   ........ ..|..+       +       
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~~-------~-------   67 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEI-------C-------   67 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGG-------G-------
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCHHH-------h-------
Confidence            4667786 999999999999988  4799999998766544444432   11122222 222211       1       


Q ss_pred             CCcccEEEecCCCCC
Q 033396           89 DGKLNILVSSAQLPY  103 (120)
Q Consensus        89 ~g~id~li~~ag~~~  103 (120)
                       ..-|++|.++|...
T Consensus        68 -~daDvVVitaG~~~   81 (143)
T d1llda1          68 -RDADMVVITAGPRQ   81 (143)
T ss_dssp             -TTCSEEEECCCCCC
T ss_pred             -hCCcEEEEeccccc
Confidence             35799999999876

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=96.45  E-value=0.012  Score=33.66  Aligned_cols=34  Identities=21%  Similarity=0.195  Sum_probs=29.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      .|.++|.|+ |.+|..+|..|.+.|.+|.++.+.+
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            466777776 8999999999999999999998864

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.41  E-value=0.015  Score=33.56  Aligned_cols=36  Identities=22%  Similarity=0.185  Sum_probs=31.0

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      .++|.++|.|+ |.+|..+|..|++.|.+|.++.+.+
T Consensus        28 ~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          28 PEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            45778888876 8999999999999999999997753

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.41  E-value=0.002  Score=38.68  Aligned_cols=37  Identities=24%  Similarity=0.357  Sum_probs=33.0

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      +.+++|.++|.|| |.+|..-++.|++.|++|++++..
T Consensus         9 ~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           9 HQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             ECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4689999999999 669999999999999999998653

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=96.37  E-value=0.0094  Score=34.49  Aligned_cols=35  Identities=17%  Similarity=0.124  Sum_probs=30.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      -++.++|.|+ |.+|..+|..|.+.|.+|.++.|.+
T Consensus        24 ~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          24 IPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             CCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcc
Confidence            3567888887 9999999999999999999998864

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.36  E-value=0.0065  Score=36.78  Aligned_cols=46  Identities=13%  Similarity=-0.075  Sum_probs=34.4

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHH
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEW   57 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~   57 (120)
                      -+.+.+.|.|+ |.+|..++..++..+ +++++.|.++..++.....+
T Consensus         5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl   51 (154)
T d1pzga1           5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDL   51 (154)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHH
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHH
Confidence            34566778897 999999999888888 68999998876554443333

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=96.35  E-value=0.0032  Score=37.87  Aligned_cols=33  Identities=21%  Similarity=0.171  Sum_probs=29.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChH
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET   48 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~   48 (120)
                      .+.|.|+ |.+|..++..|++.|++|.+++|++.
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~   34 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQ   34 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHH
Confidence            4788888 99999999999999999999998753

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.34  E-value=0.0076  Score=36.94  Aligned_cols=40  Identities=25%  Similarity=0.341  Sum_probs=36.1

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE   49 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~   49 (120)
                      ..+.||+++|.|- |.+|+.+|+.+...|++|++++.++-.
T Consensus        20 ~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          20 VMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             ceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccch
Confidence            4589999999987 689999999999999999999999854

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.32  E-value=0.0073  Score=36.05  Aligned_cols=73  Identities=14%  Similarity=0.009  Sum_probs=44.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhc---CCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           15 TALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKSK---GLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+.|.|+ |.+|..++..++..+  .+++++|+++...+....++...   .........|.              +.+ 
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~--------------~~~-   66 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDY--------------SDV-   66 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CG--------------GGG-
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCcH--------------HHh-
Confidence            3556687 999999999999988  47999999876654444444321   22222222111              112 


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                      ..-|++|.++|...
T Consensus        67 ~~adivvitag~~~   80 (142)
T d1y6ja1          67 KDCDVIVVTAGANR   80 (142)
T ss_dssp             TTCSEEEECCCC--
T ss_pred             CCCceEEEeccccc
Confidence            56799999999876

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=96.30  E-value=0.015  Score=34.72  Aligned_cols=35  Identities=23%  Similarity=0.227  Sum_probs=28.3

Q ss_pred             CcEEEE-ecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           13 GMTALV-TGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        13 ~~~~li-tGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      ++.++| -.+++.+|.++|..|+++|++|.++.+.+
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            444444 45678999999999999999999998764

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.29  E-value=0.018  Score=34.65  Aligned_cols=78  Identities=17%  Similarity=0.163  Sum_probs=46.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCC-------EEEEe--eCChHHHHHHHHHHHhc-CCeEEEEeccCCCHHHHHHHHHH
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGA-------IVHTC--SRNETELNQRIQEWKSK-GLQVSGNACDLKIRAQREKLMET   83 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~-------~v~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~   83 (120)
                      ..+.|+||+|.+|..++..|+..+.       ...+.  +.+...++....++... ......+... ++.   ...+  
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~--   78 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEAT-DDP---KVAF--   78 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE-SCH---HHHT--
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccC-Cch---hhhc--
Confidence            3689999999999999999998652       12222  33444444444444432 2223222222 211   2223  


Q ss_pred             HHhhcCCcccEEEecCCCCC
Q 033396           84 VSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        84 ~~~~~~g~id~li~~ag~~~  103 (120)
                            ...|++|.++|...
T Consensus        79 ------~~advViitaG~~~   92 (154)
T d1y7ta1          79 ------KDADYALLVGAAPR   92 (154)
T ss_dssp             ------TTCSEEEECCCCCC
T ss_pred             ------ccccEEEeecCcCC
Confidence                  57899999999976

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.29  E-value=0.025  Score=34.00  Aligned_cols=75  Identities=7%  Similarity=0.024  Sum_probs=48.0

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHh----cCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKS----KGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ..+.|.|+ |.+|..++..+...+ .+++++|+++...+.....+..    .+.+......+  +.           +.+
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~-----------~~~   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TY-----------DDL   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CG-----------GGG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cc-----------ccc
Confidence            35677785 999999998888877 6799999987655444333322    12333232222  11           112


Q ss_pred             CCcccEEEecCCCCC
Q 033396           89 DGKLNILVSSAQLPY  103 (120)
Q Consensus        89 ~g~id~li~~ag~~~  103 (120)
                       ..-|++|.++|...
T Consensus        70 -~~advvvitag~~~   83 (150)
T d1t2da1          70 -AGADVVIVTAGFTK   83 (150)
T ss_dssp             -TTCSEEEECCSCSS
T ss_pred             -CCCcEEEEeccccc
Confidence             56899999999765

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.29  E-value=0.021  Score=33.88  Aligned_cols=74  Identities=14%  Similarity=0.089  Sum_probs=46.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhc----CCeEEEE-eccCCCHHHHHHHHHHHHhh
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSK----GLQVSGN-ACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +.+.|.|+ |.+|.++|..|+..+ +.++++|.++...+.....+...    ....... ..|..+       +      
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~-------~------   67 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYAD-------T------   67 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGG-------G------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHH-------h------
Confidence            46677786 999999999998877 68999998776544443333211    2222121 122221       1      


Q ss_pred             cCCcccEEEecCCCCC
Q 033396           88 FDGKLNILVSSAQLPY  103 (120)
Q Consensus        88 ~~g~id~li~~ag~~~  103 (120)
                        ..-|++|.+||.+.
T Consensus        68 --~~advvvitag~~~   81 (142)
T d1uxja1          68 --ANSDVIVVTSGAPR   81 (142)
T ss_dssp             --TTCSEEEECCSCC-
T ss_pred             --cCCCEEEEeeeccC
Confidence              45799999999876

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.23  E-value=0.0044  Score=38.35  Aligned_cols=37  Identities=27%  Similarity=0.299  Sum_probs=34.6

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      +++||.++|.|.+.-+|+.++..|+++|++|..+...
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            6899999999999999999999999999999988765

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.13  E-value=0.031  Score=34.01  Aligned_cols=36  Identities=17%  Similarity=0.194  Sum_probs=31.3

Q ss_pred             CCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHH
Q 033396           21 GTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE   56 (120)
Q Consensus        21 a~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~   56 (120)
                      +.|-+|.+++++|++.|++|++.+|++++.+++.++
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            458999999999999999999999998887766553

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.09  E-value=0.014  Score=33.69  Aligned_cols=33  Identities=24%  Similarity=0.219  Sum_probs=28.5

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      ++.++|.|| |.||.++|..|.+.|.+|.++.++
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            345777777 899999999999999999999775

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.08  E-value=0.018  Score=32.70  Aligned_cols=35  Identities=26%  Similarity=0.271  Sum_probs=29.8

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      .++.++|.|| |.+|..+|..|++.|++|.++.+.+
T Consensus        20 ~p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          20 LPQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            3467887776 8999999999999999999997753

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.08  E-value=0.0038  Score=43.94  Aligned_cols=79  Identities=16%  Similarity=0.269  Sum_probs=51.6

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCCh-------------------HHHHHHHHHHHhc--CCeEEEEe
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE-------------------TELNQRIQEWKSK--GLQVSGNA   68 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~~~~~--~~~~~~~~   68 (120)
                      +++..++|.|+ ||+|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+...  ..++..+.
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~  113 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF  113 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeee
Confidence            45667999998 7899999999999995 688887641                   1334444555443  34555666


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCcccEEEecCC
Q 033396           69 CDLKIRAQREKLMETVSSQFDGKLNILVSSAQ  100 (120)
Q Consensus        69 ~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag  100 (120)
                      .++.+..  ..++        .+.|++|++.-
T Consensus       114 ~~i~~~~--~~~~--------~~~DlVi~~~D  135 (426)
T d1yovb1         114 NKIQDFN--DTFY--------RQFHIIVCGLD  135 (426)
T ss_dssp             SCGGGBC--HHHH--------TTCSEEEECCS
T ss_pred             ccccchH--HHHH--------HhcchheeccC
Confidence            5554432  2233        46788887654

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.05  E-value=0.057  Score=31.88  Aligned_cols=36  Identities=14%  Similarity=0.077  Sum_probs=31.1

Q ss_pred             ccCcEEEEecCC---CchHHHHHHHHHHCCCEEEEeeCC
Q 033396           11 LKGMTALVTGGT---KGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        11 ~~~~~~litGa~---~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      .+.|.+.|.|++   +..|..+++.|.+.|++|+.+...
T Consensus        17 ~~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~   55 (139)
T d2d59a1          17 TRYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPK   55 (139)
T ss_dssp             HHCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT
T ss_pred             hcCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCc
Confidence            478899999998   569999999999999999877554

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.03  E-value=0.06  Score=32.00  Aligned_cols=75  Identities=13%  Similarity=0.116  Sum_probs=47.3

Q ss_pred             EEEEecCCCchHHHHHHHHHH-CC--CEEEEeeCChHHHHHHHHHHHhcC--CeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           15 TALVTGGTKGIGYAVVEELAA-FG--AIVHTCSRNETELNQRIQEWKSKG--LQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~-~g--~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+.|+|++|.+|.+++..|+. .+  .++++.|..+ ..+....++....  .....+ ..-.+.   + .+        
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~-~~~~~~---~-~~--------   67 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGF-SGEDAT---P-AL--------   67 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEE-CSSCCH---H-HH--------
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEE-EcCCCc---c-cc--------
Confidence            477999999999999998864 33  7899999865 3333334444322  222221 112221   1 23        


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                      ..-|++|.++|.+.
T Consensus        68 ~~aDvvvitaG~~~   81 (145)
T d2cmda1          68 EGADVVLISAGVRR   81 (145)
T ss_dssp             TTCSEEEECCSCCC
T ss_pred             CCCCEEEECCCccC
Confidence            46799999999976

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=96.03  E-value=0.02  Score=32.86  Aligned_cols=35  Identities=29%  Similarity=0.359  Sum_probs=30.1

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      .++.++|.|| |.+|..+|..|++.|.+|.++.+.+
T Consensus        31 ~~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          31 NSGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HHSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            3467888877 8999999999999999999998764

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=95.94  E-value=0.0054  Score=35.68  Aligned_cols=57  Identities=18%  Similarity=0.159  Sum_probs=39.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHH
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKL   80 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   80 (120)
                      -++|.|. +.+|..++++|.  +.+|++++.++...+...    ..+  +.++.+|.++++.+.++
T Consensus         2 HivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~----~~~--~~~i~Gd~~~~~~L~~a   58 (129)
T d2fy8a1           2 HVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVL----RSG--ANFVHGDPTRVSDLEKA   58 (129)
T ss_dssp             CEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHH----HTT--CEEEESCTTSHHHHHHT
T ss_pred             EEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHH----hcC--ccccccccCCHHHHHHh
Confidence            4677775 779999999984  556777787776554332    233  45778999998866553

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=95.93  E-value=0.007  Score=37.80  Aligned_cols=39  Identities=26%  Similarity=0.172  Sum_probs=32.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHH
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRI   54 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~   54 (120)
                      .+.|.|+ |..|.++|..|++.|++|.+.+|+++..+.+.
T Consensus         9 KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~   47 (189)
T d1n1ea2           9 KAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVN   47 (189)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHH
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHh
Confidence            4777777 78999999999999999999999987665443

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.92  E-value=0.038  Score=31.44  Aligned_cols=65  Identities=12%  Similarity=0.131  Sum_probs=45.7

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMET   83 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   83 (120)
                      ...+.++.|.|+ |=+|+-++....+.|+++++++.++....        ....-.++..|..|.+.+.++..+
T Consensus         8 ~~~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA--------~~va~~~i~~~~~d~~~l~~~~~~   72 (111)
T d1kjqa2           8 RPAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPA--------MHVAHRSHVINMLDGDALRRVVEL   72 (111)
T ss_dssp             STTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGG--------GGGSSEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCch--------hhcCCeEEECCCCCHHHHHHHHHh
Confidence            345667888885 78999999999999999999998653211        011224566788887777666643

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.90  E-value=0.034  Score=35.08  Aligned_cols=81  Identities=17%  Similarity=0.178  Sum_probs=55.8

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcC-CeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-LQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .+.+++-.|++.|.-.+...++.....+|+.++.++...+...+.+...+ .++.++..|..+..          ... +
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~----------~~~-~  143 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV----------PEF-S  143 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGG-C
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHcc----------ccc-c
Confidence            56789999988776666555555555699999999888777777766553 56666666654321          011 6


Q ss_pred             cccEEEecCCCCC
Q 033396           91 KLNILVSSAQLPY  103 (120)
Q Consensus        91 ~id~li~~ag~~~  103 (120)
                      ++|.++.++++..
T Consensus       144 ~fD~I~~~~~~~~  156 (213)
T d1dl5a1         144 PYDVIFVTVGVDE  156 (213)
T ss_dssp             CEEEEEECSBBSC
T ss_pred             chhhhhhhccHHH
Confidence            7898888887655

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=95.86  E-value=0.043  Score=31.10  Aligned_cols=36  Identities=25%  Similarity=0.173  Sum_probs=31.2

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      ..+|.++|.|+ |.+|..+|..|++.|.+|.++.+.+
T Consensus        20 ~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          20 EPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            34688888887 8999999999999999999998754

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=95.84  E-value=0.047  Score=35.52  Aligned_cols=58  Identities=17%  Similarity=0.115  Sum_probs=44.6

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDL   71 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   71 (120)
                      ..++.++=.||++|+   ++..+++.|++|+.+|.++..++.+.+..+..+.++.++..|+
T Consensus       119 ~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~  176 (254)
T d2nxca1         119 RPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSL  176 (254)
T ss_dssp             CTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCH
T ss_pred             CccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEeccc
Confidence            478899999998886   3345677899999999999888777776666666666666654

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.80  E-value=0.015  Score=34.74  Aligned_cols=41  Identities=20%  Similarity=0.223  Sum_probs=34.0

Q ss_pred             EEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHH
Q 033396           16 ALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEW   57 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~   57 (120)
                      +.+.|+ |.+|.++++.|.+.| ++|++++|+++..+.+.++.
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~   44 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL   44 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhc
Confidence            566666 999999999998877 89999999988877666653

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=95.74  E-value=0.031  Score=35.51  Aligned_cols=79  Identities=19%  Similarity=0.165  Sum_probs=58.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcC-CeEEEEeccCCCHHHHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-LQVSGNACDLKIRAQREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   90 (120)
                      .+..+|-.|+++|.-.++..+++  |.+|+.+++++.-.+...+.+...+ .++.++..|..+-.          ... +
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~----------~~~-~  144 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGF----------PPK-A  144 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGG-C
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCC----------ccc-C
Confidence            56689999998888777777776  4679999999776666666666654 78888888876411          111 7


Q ss_pred             cccEEEecCCCCC
Q 033396           91 KLNILVSSAQLPY  103 (120)
Q Consensus        91 ~id~li~~ag~~~  103 (120)
                      ++|.++.++++..
T Consensus       145 pfD~Iiv~~a~~~  157 (215)
T d1jg1a_         145 PYDVIIVTAGAPK  157 (215)
T ss_dssp             CEEEEEECSBBSS
T ss_pred             cceeEEeeccccc
Confidence            8999988888866

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=95.70  E-value=0.018  Score=36.79  Aligned_cols=60  Identities=17%  Similarity=0.083  Sum_probs=44.8

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKI   73 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   73 (120)
                      ++++.+|=.||+.|.   ++..|++.|.+|+.+|.++.-++.+.+.+...+.++.++..|+.+
T Consensus        36 ~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~   95 (246)
T d1y8ca_          36 LVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISN   95 (246)
T ss_dssp             CCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGG
T ss_pred             CCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhh
Confidence            567889999998775   667888889999999999887766655555555566666666543

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=95.59  E-value=0.026  Score=32.68  Aligned_cols=35  Identities=17%  Similarity=0.224  Sum_probs=30.4

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      .++.++|.|+ |.||..+|..|.+.|.+|.++.+.+
T Consensus        25 ~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          25 VPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            4577888887 8999999999999999999997753

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.55  E-value=0.045  Score=34.65  Aligned_cols=59  Identities=22%  Similarity=0.077  Sum_probs=41.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKI   73 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   73 (120)
                      +.+.+|=.||+.|.   ++..|++.|++|+.++.++.-++.+.+.+...+.++.++..|+.+
T Consensus        41 ~~~~iLDiGcGtG~---~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~   99 (251)
T d1wzna1          41 EVRRVLDLACGTGI---PTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLE   99 (251)
T ss_dssp             CCCEEEEETCTTCH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGG
T ss_pred             CCCEEEEeCCCCCc---cchhhcccceEEEEEeeccccccccccccccccccchheehhhhh
Confidence            46689999998763   456688899999999999876666665555545455555555443

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.53  E-value=0.018  Score=35.75  Aligned_cols=38  Identities=29%  Similarity=0.455  Sum_probs=33.8

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      .++.++++.|.|. |.||+++++.+...|++|+..++..
T Consensus        40 ~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d2naca1          40 YDLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHR   77 (188)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred             eeccccceeeccc-cccchhhhhhhhccCceEEEEeecc
Confidence            4578999999986 8999999999999999999999854

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=95.50  E-value=0.01  Score=37.83  Aligned_cols=34  Identities=21%  Similarity=0.164  Sum_probs=28.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      +|.|+|.|| |--|...|.+|++.|++|.++.+++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            578898987 6668899999999999999998653

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.49  E-value=0.012  Score=36.29  Aligned_cols=32  Identities=19%  Similarity=0.185  Sum_probs=27.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      .+.|.|+ |.+|.++|..|++.|.+|.+.+|..
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~   33 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEF   33 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGG
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecc
Confidence            3566776 8999999999999999999998854

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=95.46  E-value=0.068  Score=33.13  Aligned_cols=85  Identities=21%  Similarity=0.205  Sum_probs=53.3

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHH---------------
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRA---------------   75 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---------------   75 (120)
                      +.+..++|.|+ |-.|.+-++.....|+.|.++|.+...++++.+    .+.+..  ..+..+..               
T Consensus        27 V~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~----l~~~~i--~~~~~~~~~~~~~~gyA~~~s~~   99 (183)
T d1l7da1          27 VPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES----LGGKFI--TVDDEAMKTAETAGGYAKEMGEE   99 (183)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH----TTCEEC--CC---------------------
T ss_pred             cCCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHH----hhcceE--EEeccccccccccccchhhcCHH
Confidence            45668888887 788999999999999999999999877654443    232221  11111111               


Q ss_pred             HHHHHHHHHHhhcCCcccEEEecCCCCC
Q 033396           76 QREKLMETVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        76 ~~~~~~~~~~~~~~g~id~li~~ag~~~  103 (120)
                      ...+.-+.+.+.. ..-|++|-.+-++.
T Consensus       100 ~~~~~~~~l~~~l-~~aDlVI~talipG  126 (183)
T d1l7da1         100 FRKKQAEAVLKEL-VKTDIAITTALIPG  126 (183)
T ss_dssp             --CCHHHHHHHHH-TTCSEEEECCCCTT
T ss_pred             HHHHHHHHHHHHH-HhhhhheeeeecCC
Confidence            1111122333334 67899999998877

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.40  E-value=0.026  Score=33.72  Aligned_cols=41  Identities=7%  Similarity=0.047  Sum_probs=33.4

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW   57 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~   57 (120)
                      +.+.| .|.+|.++++.|.+.|+++++.+|+.+..+++.+++
T Consensus         3 Ig~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           3 IGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             EEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            44554 499999999999999999999999987777665544

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=95.37  E-value=0.033  Score=33.66  Aligned_cols=45  Identities=20%  Similarity=0.126  Sum_probs=36.2

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHH
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK   58 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~   58 (120)
                      ..++.||..||+.|-   .+..|+++|++|+.+|.++..++...+..+
T Consensus        19 ~~~~rvLd~GCG~G~---~a~~la~~G~~V~gvD~S~~~i~~a~~~~~   63 (201)
T d1pjza_          19 VPGARVLVPLCGKSQ---DMSWLSGQGYHVVGAELSEAAVERYFTERG   63 (201)
T ss_dssp             CTTCEEEETTTCCSH---HHHHHHHHCCEEEEEEECHHHHHHHHHHHC
T ss_pred             CCCCEEEEecCcCCH---HHHHHHHcCCceEeecccHHHHHHHHHHhc
Confidence            578899999998773   666888899999999999888776665543

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.20  E-value=0.089  Score=31.36  Aligned_cols=79  Identities=15%  Similarity=0.177  Sum_probs=47.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCC-------EEEEeeCChH--HHHHHHHHHHhc-CCeEEEEeccCCCHHHHHHHHHH
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGA-------IVHTCSRNET--ELNQRIQEWKSK-GLQVSGNACDLKIRAQREKLMET   83 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~-------~v~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~   83 (120)
                      ..+.|+||+|.+|.+++..|+..+.       .+++.+.+..  .++....++... ......+.. .++   ....+  
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~---~~~~~--   77 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIA-TDK---EEIAF--   77 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEE-ESC---HHHHT--
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccccccc-Ccc---ccccc--
Confidence            3689999999999999999987541       3666665543  334433333322 112222221 111   11223  


Q ss_pred             HHhhcCCcccEEEecCCCCCc
Q 033396           84 VSSQFDGKLNILVSSAQLPYS  104 (120)
Q Consensus        84 ~~~~~~g~id~li~~ag~~~~  104 (120)
                            ...|++|.++|.+..
T Consensus        78 ------~~~dvVVitag~~~~   92 (154)
T d5mdha1          78 ------KDLDVAILVGSMPRR   92 (154)
T ss_dssp             ------TTCSEEEECCSCCCC
T ss_pred             ------CCceEEEEecccCCC
Confidence                  578999999999773

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.20  E-value=0.023  Score=35.43  Aligned_cols=38  Identities=18%  Similarity=0.154  Sum_probs=33.5

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      .++.+|++.|.|. |.||+.+++.+...|++|+..++..
T Consensus        43 ~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~   80 (191)
T d1gdha1          43 EKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHR   80 (191)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSC
T ss_pred             ceecccceEEeec-ccchHHHHHHHHhhccccccccccc
Confidence            3578999999987 8999999999999999999998753

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=95.15  E-value=0.075  Score=33.23  Aligned_cols=71  Identities=15%  Similarity=0.193  Sum_probs=48.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      +++||+++=.||+.|+   ++..++..|+ +|+.++.++..++...+    +..++.++.+|+.+.              
T Consensus        46 dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~----N~~~~~~~~~D~~~l--------------  104 (197)
T d1ne2a_          46 NIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKR----NCGGVNFMVADVSEI--------------  104 (197)
T ss_dssp             SSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHH----HCTTSEEEECCGGGC--------------
T ss_pred             CCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHH----ccccccEEEEehhhc--------------
Confidence            5789999999987773   3344666774 69999998866543333    234567778887532              


Q ss_pred             CCcccEEEecCCC
Q 033396           89 DGKLNILVSSAQL  101 (120)
Q Consensus        89 ~g~id~li~~ag~  101 (120)
                      ++++|++|.|.-+
T Consensus       105 ~~~fD~Vi~NPPf  117 (197)
T d1ne2a_         105 SGKYDTWIMNPPF  117 (197)
T ss_dssp             CCCEEEEEECCCC
T ss_pred             CCcceEEEeCccc
Confidence            2678988888543

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.15  E-value=0.025  Score=35.53  Aligned_cols=38  Identities=24%  Similarity=0.263  Sum_probs=34.1

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      .++.+|++.|.|. |.||+.+++.+...|++|+..++..
T Consensus        39 ~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~   76 (197)
T d1j4aa1          39 REVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFR   76 (197)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccccCCeEEEecc-cccchhHHHhHhhhcccccccCccc
Confidence            3589999999987 8999999999999999999998754

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=95.14  E-value=0.012  Score=37.77  Aligned_cols=31  Identities=29%  Similarity=0.219  Sum_probs=27.2

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      ++|.|| |-.|.++|.+|+++|.+|++++++.
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            677776 8899999999999999999998753

>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Nucleotide excision repair enzyme UvrB
species: Thermus thermophilus [TaxId: 274]

Probab=95.11  E-value=0.16  Score=31.06  Aligned_cols=65  Identities=17%  Similarity=0.110  Sum_probs=52.2

Q ss_pred             HHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccEEEecCCC
Q 033396           33 LAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSAQL  101 (120)
Q Consensus        33 l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  101 (120)
                      -.+.|.+++++..+....+.+...+...|-++.+++.+.++.+ -.++++++..   |.+++||...-.
T Consensus        27 ~~~~g~r~lvfc~t~~~~~~l~~~L~~~Gi~a~~~Hg~~~~~e-R~~~l~~F~~---G~~~vLVaT~v~   91 (174)
T d1c4oa2          27 RAARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFK-RQALIRDLRL---GHYDCLVGINLL   91 (174)
T ss_dssp             HHHTTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTCCHHH-HHHHHHHHHT---TSCSEEEESCCC
T ss_pred             HHhcCCcEEEEEcchhHHHHHHHHHHhcCCceEEEecccchHH-HHHHHHHHHC---CCeEEEEeeeee
Confidence            3456888999988888888899999999999999999998654 5666776666   789999887633

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.08  E-value=0.079  Score=33.61  Aligned_cols=81  Identities=15%  Similarity=0.135  Sum_probs=56.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc------CCeEEEEeccCCCHHHHHHHHHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK------GLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      .|..+|-.|++.|.-.++..++.....+|+.++++++-.+...+.+...      ...+.+...|..+..          
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~----------  145 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY----------  145 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC----------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc----------
Confidence            5678999999999888877778877789999999987766555554432      345666667764311          


Q ss_pred             hhcCCcccEEEecCCCCC
Q 033396           86 SQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~  103 (120)
                      ... +++|.++.+++...
T Consensus       146 ~~~-~~fD~I~~~~~~~~  162 (224)
T d1i1na_         146 AEE-APYDAIHVGAAAPV  162 (224)
T ss_dssp             GGG-CCEEEEEECSBBSS
T ss_pred             chh-hhhhhhhhhcchhh
Confidence            011 57888887777655

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.06  E-value=0.11  Score=32.03  Aligned_cols=58  Identities=19%  Similarity=0.020  Sum_probs=39.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLK   72 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   72 (120)
                      ++..+|=.||+.|.   ++..|++.|++|+.+|.++..++...+.+...+..+..+..|..
T Consensus        37 ~~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~   94 (226)
T d1ve3a1          37 KRGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDAR   94 (226)
T ss_dssp             SCCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTT
T ss_pred             CCCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccccccccccccccc
Confidence            44578999998876   55677888999999999877766555544443444444444443

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.06  E-value=0.1  Score=30.67  Aligned_cols=78  Identities=14%  Similarity=0.150  Sum_probs=53.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHC-CCEEEE-eeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           15 TALVTGGTKGIGYAVVEELAAF-GAIVHT-CSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~-g~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      .+.|.|++|-+|+.+++.+.+. +.+++. +++... +.    .+...+.++   ..|+|.|+.....++.+.+.   ++
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~~----~~~~~~~Dv---vIDFS~p~~~~~~~~~~~~~---~~   69 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-LS----LLTDGNTEV---VIDFTHPDVVMGNLEFLIDN---GI   69 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-TH----HHHTTTCSE---EEECCCTTTHHHHHHHHHHT---TC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-hh----hhccccCCE---EEEcccHHHHHHHHHHHHhc---CC
Confidence            3789999999999999988774 466543 344321 11    112234444   36999999888888877764   46


Q ss_pred             cEEEecCCCCC
Q 033396           93 NILVSSAQLPY  103 (120)
Q Consensus        93 d~li~~ag~~~  103 (120)
                      ..|+=..|+..
T Consensus        70 ~~ViGTTG~~~   80 (135)
T d1yl7a1          70 HAVVGTTGFTA   80 (135)
T ss_dssp             EEEECCCCCCH
T ss_pred             CEEEeccccch
Confidence            78888888875

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.03  E-value=0.036  Score=34.54  Aligned_cols=35  Identities=20%  Similarity=0.172  Sum_probs=29.1

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHH
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN   51 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~   51 (120)
                      +.|. |.|.+|.++|..|++.|++|+.+|.++...+
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~   37 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKID   37 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHH
Confidence            4555 4599999999999999999999998865543

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=94.90  E-value=0.024  Score=35.57  Aligned_cols=37  Identities=27%  Similarity=0.251  Sum_probs=33.4

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      .++.+|++.|.|. |.||+.+++.+...|++|+..++.
T Consensus        41 ~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~   77 (199)
T d1dxya1          41 KELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPY   77 (199)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             ccccceeeeeeec-ccccccccccccccceeeeccCCc
Confidence            4578999999987 889999999999999999999875

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=94.86  E-value=0.031  Score=32.60  Aligned_cols=35  Identities=20%  Similarity=0.154  Sum_probs=30.7

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      .++.++|.|| |.+|..+|..|.+.|.+|.++.+.+
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecc
Confidence            4678888877 8999999999999999999998753

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=94.75  E-value=0.02  Score=37.11  Aligned_cols=36  Identities=19%  Similarity=0.183  Sum_probs=30.5

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      -++|.|+|.|| |--|...|.+|++.|.+|.++.+++
T Consensus        28 ~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          28 SNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            46678999988 5668899999999999999998754

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.74  E-value=0.028  Score=35.10  Aligned_cols=38  Identities=26%  Similarity=0.184  Sum_probs=34.0

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      .++.||++.|.|. |.||+.+++.+...|++|+..++..
T Consensus        45 ~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~   82 (193)
T d1mx3a1          45 ARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYL   82 (193)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTS
T ss_pred             eeeeCceEEEecc-ccccccceeeeeccccceeeccCcc
Confidence            4589999999987 8999999999999999999998853

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=94.70  E-value=0.053  Score=33.00  Aligned_cols=40  Identities=15%  Similarity=0.262  Sum_probs=36.0

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE   49 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~   49 (120)
                      .++.||+++|.|= |.+|+.+|+++...|++|+++..+|-.
T Consensus        19 ~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~   58 (163)
T d1v8ba1          19 FLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPIC   58 (163)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred             ceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchh
Confidence            4589999998875 889999999999999999999999855

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=94.62  E-value=0.14  Score=29.89  Aligned_cols=36  Identities=22%  Similarity=0.051  Sum_probs=29.9

Q ss_pred             cccCcEEEEecCCC---chHHHHHHHHHHCCCEEEEeeC
Q 033396           10 SLKGMTALVTGGTK---GIGYAVVEELAAFGAIVHTCSR   45 (120)
Q Consensus        10 ~~~~~~~litGa~~---~ig~~~a~~l~~~g~~v~~~~~   45 (120)
                      ..+.|.+.|.|+|.   ..|..+.+.|.+.|++++.+.-
T Consensus        10 L~~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~   48 (136)
T d1iuka_          10 LSQAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNP   48 (136)
T ss_dssp             HHHCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECG
T ss_pred             HhCCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEe
Confidence            35788999999984   4899999999999999877643

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=94.55  E-value=0.04  Score=33.99  Aligned_cols=37  Identities=38%  Similarity=0.378  Sum_probs=33.5

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      .+.+|++.|.|. |.||+.+++.+...|++|+..++..
T Consensus        39 ~l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~   75 (181)
T d1qp8a1          39 LIQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTP   75 (181)
T ss_dssp             CCTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cccCceEEEecc-ccccccceeeeeccccccccccccc
Confidence            478999999998 6699999999999999999999864

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=94.53  E-value=0.016  Score=35.84  Aligned_cols=31  Identities=23%  Similarity=0.243  Sum_probs=26.7

Q ss_pred             cEEEEecCCCchHH-----HHHHHHHHCCCEEEEee
Q 033396           14 MTALVTGGTKGIGY-----AVVEELAAFGAIVHTCS   44 (120)
Q Consensus        14 ~~~litGa~~~ig~-----~~a~~l~~~g~~v~~~~   44 (120)
                      |.++|||.+.|.|+     .+++.|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            78999999888776     47789999999999886

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.50  E-value=0.067  Score=33.72  Aligned_cols=42  Identities=17%  Similarity=0.157  Sum_probs=34.4

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE   56 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~   56 (120)
                      .++.+|..||+.|.   .+..|++.|++|+.+|.++...+...+.
T Consensus        45 ~~~rvLd~GCG~G~---~a~~LA~~G~~V~gvD~S~~ai~~a~~~   86 (229)
T d2bzga1          45 SGLRVFFPLCGKAV---EMKWFADRGHSVVGVEISELGIQEFFTE   86 (229)
T ss_dssp             CSCEEEETTCTTCT---HHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCcH---HHHHHHhCCCcEEEEeCCHHHHHHHHHH
Confidence            67799999998874   5778889999999999998777655554

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.49  E-value=0.022  Score=34.69  Aligned_cols=34  Identities=12%  Similarity=0.124  Sum_probs=28.4

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCE-EEEeeCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRN   46 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~-v~~~~~~   46 (120)
                      .+|.++|.|| |-.|...|..|+++|++ |.++.+.
T Consensus         3 ~~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~   37 (196)
T d1gtea4           3 YSAKIALLGA-GPASISCASFLARLGYSDITIFEKQ   37 (196)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESS
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEec
Confidence            3677888887 78899999999999984 8888775

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.38  E-value=0.042  Score=34.78  Aligned_cols=34  Identities=24%  Similarity=0.194  Sum_probs=28.6

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      ..+.|+|.|| |--|..+|..|+++|.+|++++++
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~   36 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERS   36 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCC
Confidence            4566888887 667889999999999999999875

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.34  E-value=0.19  Score=33.03  Aligned_cols=60  Identities=18%  Similarity=0.081  Sum_probs=41.6

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCH
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIR   74 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~   74 (120)
                      .+++++|-.||+.|+   ++..+++.|+ +|+.++.++.. ....+.....  ..++.++..|+.+.
T Consensus        34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~~~~~~~i~~~~~~~~~l   96 (311)
T d2fyta1          34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRLNKLEDTITLIKGKIEEV   96 (311)
T ss_dssp             TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHHTTCTTTEEEEESCTTTS
T ss_pred             CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHHhCCCccceEEEeeHHHh
Confidence            589999999998775   5666777885 69999887653 2333333332  46788888887664

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=94.25  E-value=0.038  Score=32.78  Aligned_cols=35  Identities=20%  Similarity=0.186  Sum_probs=29.1

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCC--CEEEEeeCCh
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNE   47 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~   47 (120)
                      .||.++|.|| |..|..+|.+|.+.+  .+|+++++.+
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            3789999998 788999999999988  4688887654

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.25  E-value=0.067  Score=32.97  Aligned_cols=65  Identities=20%  Similarity=0.110  Sum_probs=44.5

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHH-----HHHh--cCCeEEEEeccCCCH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQ-----EWKS--KGLQVSGNACDLKIR   74 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~D~~~~   74 (120)
                      .++.+|++.|.|. |.||+.+++.+...|++|+..++...+......     .+++  ...++..+.+..++.
T Consensus        40 ~~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~~~~l~ell~~sDiv~~~~Plt~~  111 (184)
T d1ygya1          40 TEIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTPE  111 (184)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCEECCHHHHHHHCSEEEECCCCSTT
T ss_pred             ccccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhHHhhcCceeccHHHHHhhCCEEEEcCCCCch
Confidence            3578999998885 999999999999999999999886433221111     1111  134666777766654

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=94.24  E-value=0.093  Score=30.56  Aligned_cols=78  Identities=12%  Similarity=0.020  Sum_probs=51.6

Q ss_pred             ccCcEEEEecCC----------CchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHH
Q 033396           11 LKGMTALVTGGT----------KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKL   80 (120)
Q Consensus        11 ~~~~~~litGa~----------~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   80 (120)
                      -..|.++|.|++          +.-+...++.|.+.|++++++..+++....-.    ....++.+   +--..+.+.++
T Consensus         5 ~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~----d~aD~lYf---ePlt~e~v~~I   77 (127)
T d1a9xa3           5 TDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDP----EMADATYI---EPIHWEVVRKI   77 (127)
T ss_dssp             SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCG----GGSSEEEC---SCCCHHHHHHH
T ss_pred             CCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcCh----hhcceeee---ecCCHHHHHHH
Confidence            356789999985          34667788999999999999999875531100    01233332   33345677777


Q ss_pred             HHHHHhhcCCcccEEEecCCC
Q 033396           81 METVSSQFDGKLNILVSSAQL  101 (120)
Q Consensus        81 ~~~~~~~~~g~id~li~~ag~  101 (120)
                      +++      .++|.++...|-
T Consensus        78 i~~------E~pd~il~~~GG   92 (127)
T d1a9xa3          78 IEK------ERPDAVLPTMGG   92 (127)
T ss_dssp             HHH------HCCSEEECSSSH
T ss_pred             HHH------hCcCCeEEEeee
Confidence            765      578888876654

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.19  E-value=0.046  Score=33.70  Aligned_cols=36  Identities=22%  Similarity=0.186  Sum_probs=31.3

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      ..+|.++|.|| |--|.+.|..|+++|++|.++.+.+
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            56788999988 6778899999999999999998753

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=94.18  E-value=0.029  Score=36.14  Aligned_cols=30  Identities=23%  Similarity=0.240  Sum_probs=25.9

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      ++|.|| |-.|..+|.+|+++|.+|+++++.
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            567766 888999999999999999999763

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=94.09  E-value=0.041  Score=36.59  Aligned_cols=35  Identities=26%  Similarity=0.322  Sum_probs=29.5

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      +.|.++|.|| |--|..+|.+|++.|.+|.++....
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence            3578899988 6678899999999999999997754

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=94.06  E-value=0.029  Score=31.46  Aligned_cols=39  Identities=21%  Similarity=0.127  Sum_probs=31.3

Q ss_pred             cccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396            8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus         8 ~~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      ..++++|.++|.|++ .-|..++..|++.+.++++..+..
T Consensus        27 ~~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          27 PELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             GGGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             hhhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecC
Confidence            446899999999984 667789999999988877776654

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.05  E-value=0.1  Score=30.82  Aligned_cols=42  Identities=7%  Similarity=-0.120  Sum_probs=32.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHH
Q 033396           15 TALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEW   57 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~~~~~~~~~~~   57 (120)
                      .+.|.|+ |.+|..++..++.++  .+++++|.++...+....++
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl   45 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDL   45 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHH
Confidence            3667786 999999999999887  57999999887655443333

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=94.00  E-value=0.067  Score=31.64  Aligned_cols=33  Identities=15%  Similarity=0.094  Sum_probs=27.0

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCChHH
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE   49 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~   49 (120)
                      +-|.|. |.+|.++++.|++.|++|+..++...+
T Consensus         3 IgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~   35 (152)
T d1i36a2           3 VGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSP   35 (152)
T ss_dssp             EEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCH
T ss_pred             EEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhH
Confidence            445554 999999999999999999988876544

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=93.94  E-value=0.29  Score=30.96  Aligned_cols=77  Identities=19%  Similarity=0.045  Sum_probs=51.8

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      .+..+|-.|++.|.-.++   |++.+.+|+.++.++...+...+.+. ...++.++..|...-.          ... ++
T Consensus        70 ~g~~VLdIG~GsGy~ta~---La~l~~~V~aiE~~~~~~~~A~~~~~-~~~nv~~~~~d~~~g~----------~~~-~p  134 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTAL---IAEIVDKVVSVEINEKMYNYASKLLS-YYNNIKLILGDGTLGY----------EEE-KP  134 (224)
T ss_dssp             TTCEEEEECCTTSHHHHH---HHHHSSEEEEEESCHHHHHHHHHHHT-TCSSEEEEESCGGGCC----------GGG-CC
T ss_pred             ccceEEEecCCCCHHHHH---HHHHhcccccccccHHHHHHHHHHHh-cccccccccCchhhcc----------hhh-hh
Confidence            667899999888764443   44446789999988776655544333 3467888888875311          111 78


Q ss_pred             ccEEEecCCCCC
Q 033396           92 LNILVSSAQLPY  103 (120)
Q Consensus        92 id~li~~ag~~~  103 (120)
                      +|.++.++++..
T Consensus       135 fD~Iiv~~a~~~  146 (224)
T d1vbfa_         135 YDRVVVWATAPT  146 (224)
T ss_dssp             EEEEEESSBBSS
T ss_pred             HHHHHhhcchhh
Confidence            999888887755

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=93.85  E-value=0.13  Score=30.67  Aligned_cols=54  Identities=17%  Similarity=0.096  Sum_probs=34.7

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHC--CCEEEEeeCChHHHHHHHHHHHhcCCeEEEE
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAF--GAIVHTCSRNETELNQRIQEWKSKGLQVSGN   67 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~   67 (120)
                      .|.+.|-|+||+||.....-+.+.  .++|+.+.-.. ....+.+++.+......++
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~-N~~~L~~q~~ef~Pk~v~i   57 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR-NVKDLADAAKRTNAKRAVI   57 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS-CHHHHHHHHHHTTCSEEEE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC-CHHHHHHHHHhhcccccee
Confidence            588999999999999998888664  36766553321 2223344444445555443

>d1a9xa2 c.24.1.1 (A:936-1073) Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Methylglyoxal synthase-like
superfamily: Methylglyoxal synthase-like
family: Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain
domain: Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=93.82  E-value=0.25  Score=29.03  Aligned_cols=77  Identities=12%  Similarity=0.047  Sum_probs=50.6

Q ss_pred             ccCcEEEEecCC--CchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           11 LKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        11 ~~~~~~litGa~--~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      ++...++|+=..  .--...+++.|.+.|++++.+..       ..+.|.+.|..+..+.-.....+.+..++..     
T Consensus         5 p~~G~v~iSv~d~dK~~~~~~ak~l~~lGf~i~AT~G-------Ta~~L~~~Gi~~~~v~ki~~~~p~i~d~i~~-----   72 (138)
T d1a9xa2           5 KKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHG-------TAIVLGEAGINPRLVNKVHEGRPHIQDRIKN-----   72 (138)
T ss_dssp             CSSSEEEEECCGGGGTTHHHHHHHHHHTTCEEEECHH-------HHHHHHTTTCCCEECBCTTTCSSBHHHHHHH-----
T ss_pred             CCCCEEEEEEehhhhhHHHHHHHHHHHCCCEEEecCc-------hHHHHHHhccccccccccccccccHhHHHhc-----
Confidence            455577777653  23556899999999999998853       3445566676666554322333334445544     


Q ss_pred             CCcccEEEecCC
Q 033396           89 DGKLNILVSSAQ  100 (120)
Q Consensus        89 ~g~id~li~~ag  100 (120)
                       |.+|.|||...
T Consensus        73 -gkidlVINt~~   83 (138)
T d1a9xa2          73 -GEYTYIINTTS   83 (138)
T ss_dssp             -TCCSEEEECCC
T ss_pred             -CCeEEEEECCC
Confidence             89999999854

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.81  E-value=0.04  Score=33.80  Aligned_cols=31  Identities=16%  Similarity=0.119  Sum_probs=26.3

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      ++|.|| |--|...|.+|++.|.+|.++.+++
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            677775 7778899999999999999998853

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.79  E-value=0.15  Score=29.58  Aligned_cols=75  Identities=12%  Similarity=0.113  Sum_probs=55.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLN   93 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   93 (120)
                      .+.|.|++|-.|+.+++.+.+.+++++.. +++..+.      +  ...++   ..|+|.|+...+.++.+.+.   ++.
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~------~--~~~DV---vIDFS~p~~~~~~l~~~~~~---~~p   67 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEE------L--DSPDV---VIDFSSPEALPKTVDLCKKY---RAG   67 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEE------C--SCCSE---EEECSCGGGHHHHHHHHHHH---TCE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHH------h--ccCCE---EEEecCHHHHHHHHHHHHhc---CCC
Confidence            47899999999999999999999886644 4432110      0  12333   35999999998888887765   466


Q ss_pred             EEEecCCCCC
Q 033396           94 ILVSSAQLPY  103 (120)
Q Consensus        94 ~li~~ag~~~  103 (120)
                      +|+=..|+..
T Consensus        68 ~ViGTTG~~~   77 (128)
T d1vm6a3          68 LVLGTTALKE   77 (128)
T ss_dssp             EEECCCSCCH
T ss_pred             EEEEcCCCCH
Confidence            8888888876

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=93.68  E-value=0.16  Score=29.21  Aligned_cols=77  Identities=9%  Similarity=-0.037  Sum_probs=49.4

Q ss_pred             cCcEEEEecCC----------CchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHH
Q 033396           12 KGMTALVTGGT----------KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLM   81 (120)
Q Consensus        12 ~~~~~litGa~----------~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   81 (120)
                      ..|.++|.|++          +.-+...++.|.+.|++++++..+++....-.    ....++.   .+--..+.+.+++
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~----d~aD~lY---feplt~e~v~~Ii   75 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDY----DTSDRLY---FEPVTLEDVLEIV   75 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTST----TSSSEEE---CCCCSHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcCh----hhcCceE---EccCCHHHHHHHH
Confidence            45789999985          34566788999999999999999875531000    0122332   2233346666666


Q ss_pred             HHHHhhcCCcccEEEecCCC
Q 033396           82 ETVSSQFDGKLNILVSSAQL  101 (120)
Q Consensus        82 ~~~~~~~~g~id~li~~ag~  101 (120)
                      +.      .++|.++...|-
T Consensus        76 ~~------E~p~~ii~~~GG   89 (121)
T d1a9xa4          76 RI------EKPKGVIVQYGG   89 (121)
T ss_dssp             HH------HCCSEEECSSST
T ss_pred             HH------hCCCEEEeehhh
Confidence            55      467888776654

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.61  E-value=0.088  Score=33.14  Aligned_cols=35  Identities=20%  Similarity=0.204  Sum_probs=30.3

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      ...|.++|.|| |--|...|.+|+++|++|.++..+
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~   81 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTA   81 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeec
Confidence            57788999988 667889999999999999999764

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.43  E-value=0.42  Score=28.86  Aligned_cols=57  Identities=25%  Similarity=0.168  Sum_probs=42.3

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcC--CeEEEEeccC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG--LQVSGNACDL   71 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~   71 (120)
                      ++.+++=.||+.|   .+...+++.+.+|+.++.++..++...+.++..+  .++.++.+|.
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda   91 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDA   91 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCH
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECch
Confidence            5778887787666   2334556678899999999988877777776664  5788888875

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=93.38  E-value=0.29  Score=27.42  Aligned_cols=34  Identities=26%  Similarity=0.349  Sum_probs=26.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHC---CCEEEEeeCCh
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAF---GAIVHTCSRNE   47 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~---g~~v~~~~~~~   47 (120)
                      ++.++|.|+ |.+|..+|..|...   +.+|.++.+.+
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            567888888 89999999766654   46788887753

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=93.36  E-value=0.05  Score=35.36  Aligned_cols=30  Identities=17%  Similarity=0.292  Sum_probs=25.5

Q ss_pred             EEEecCCCchHHHHHHHHHHCCC-EEEEeeCC
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGA-IVHTCSRN   46 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~   46 (120)
                      |+|.|| |-+|.++|.+|+++|. +|.+++++
T Consensus         4 ViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           4 IVIIGA-GIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            677776 7999999999999995 69998765

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=93.27  E-value=0.3  Score=27.25  Aligned_cols=35  Identities=26%  Similarity=0.252  Sum_probs=27.1

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHH---CCCEEEEeeCCh
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAA---FGAIVHTCSRNE   47 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~---~g~~v~~~~~~~   47 (120)
                      .++.++|.|+ |.+|..+|..|.+   .|.+|.++.+.+
T Consensus        17 ~p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          17 APKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             cCCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            3578888887 8899999976655   478999887753

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.19  E-value=0.47  Score=28.75  Aligned_cols=60  Identities=20%  Similarity=0.126  Sum_probs=40.5

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcC-CeEEEEeccCCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-LQVSGNACDLKI   73 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~   73 (120)
                      +.++.+|=.||+.|.   .+..|+++|++|+.++.++..++.+.......+ ..+.+...|+.+
T Consensus        29 ~~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~   89 (198)
T d2i6ga1          29 VAPGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNT   89 (198)
T ss_dssp             SCSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTT
T ss_pred             CCCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheeccc
Confidence            456689989986554   456778899999999999877766555444443 234555555543

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.18  E-value=0.086  Score=37.78  Aligned_cols=36  Identities=14%  Similarity=0.223  Sum_probs=30.1

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRN   46 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~   46 (120)
                      .++...|+|.|+ ||+|..+++.|+..| .++.++|.+
T Consensus        22 ~L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d   58 (529)
T d1yova1          22 ALESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGN   58 (529)
T ss_dssp             HHHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC
Confidence            367778999987 799999999999999 568887664

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.03  E-value=0.11  Score=33.26  Aligned_cols=35  Identities=23%  Similarity=0.212  Sum_probs=29.5

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHH-CCCEEEEee
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAA-FGAIVHTCS   44 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~-~g~~v~~~~   44 (120)
                      .++++++++|-| .|.+|..+++.|.+ .|++|+.++
T Consensus        27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          27 IDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            358999999987 59999999999975 599988765

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=93.03  E-value=0.083  Score=34.08  Aligned_cols=34  Identities=26%  Similarity=0.324  Sum_probs=30.6

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEee
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCS   44 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~   44 (120)
                      ++++++++|-| .|..|..+++.|.+.|++|+.++
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            58999999997 59999999999999999988665

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.94  E-value=0.2  Score=31.70  Aligned_cols=81  Identities=15%  Similarity=0.041  Sum_probs=53.6

Q ss_pred             cCcEEEEecCCCchHHHHHHHHH-HCC----CEEEEeeCChHHHHHHHHHHHh------cCCeEEEEeccCCCHHHHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELA-AFG----AIVHTCSRNETELNQRIQEWKS------KGLQVSGNACDLKIRAQREKL   80 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~-~~g----~~v~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~   80 (120)
                      .+..+|-.|+++|.-.++..+++ ..|    .+|+.++++++-.+...+.+..      .-.++.++..|..+-.     
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~-----  154 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY-----  154 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCC-----
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccccc-----
Confidence            56799999998887766665555 455    4799999987655444333221      1256788888875321     


Q ss_pred             HHHHHhhcCCcccEEEecCCCCC
Q 033396           81 METVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        81 ~~~~~~~~~g~id~li~~ag~~~  103 (120)
                           ... +++|.++.++++..
T Consensus       155 -----~~~-~~fD~Iiv~~a~~~  171 (223)
T d1r18a_         155 -----PPN-APYNAIHVGAAAPD  171 (223)
T ss_dssp             -----GGG-CSEEEEEECSCBSS
T ss_pred             -----ccc-cceeeEEEEeechh
Confidence                 112 68998888888765

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=92.78  E-value=0.44  Score=27.99  Aligned_cols=85  Identities=13%  Similarity=0.050  Sum_probs=49.1

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh------cCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS------KGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      +-+.|. |-+|.+++++|++.|+.+ ...|+.++..+..++...      .-.....+...+.+.+.+......+.... 
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~-   79 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYL-   79 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTC-
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhccccccc-
Confidence            334555 899999999999988766 466666555444443221      00111222234555666776777666655 


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                      .+-.++|.+.-...
T Consensus        80 ~~~~~iid~sT~~p   93 (156)
T d2cvza2          80 REGTYWVDATSGEP   93 (156)
T ss_dssp             CTTEEEEECSCCCH
T ss_pred             cccccccccccCCH
Confidence            44455665554433

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=92.69  E-value=0.075  Score=34.61  Aligned_cols=35  Identities=29%  Similarity=0.370  Sum_probs=30.9

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEee
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCS   44 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~   44 (120)
                      .++++++++|-| .|.+|..+++.|.+.|++|+.++
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            358999999999 58999999999999999988664

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=92.66  E-value=0.54  Score=27.96  Aligned_cols=50  Identities=14%  Similarity=0.086  Sum_probs=32.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCC--CEEEEee--CChHHHHHHHHHHHhcCCeEEE
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFG--AIVHTCS--RNETELNQRIQEWKSKGLQVSG   66 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g--~~v~~~~--~~~~~~~~~~~~~~~~~~~~~~   66 (120)
                      |.+.|-|+||+||.....-+.+.-  ++|+.+.  ++...+.+   ++.+...+..+
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~---q~~~f~pk~v~   55 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVE---QCLEFSPRYAV   55 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHH---HHHHHCCSEEE
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHH---HHHHHhhcccc
Confidence            468999999999999988777753  6666553  33344443   34443444433

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=92.57  E-value=0.44  Score=26.71  Aligned_cols=81  Identities=12%  Similarity=0.083  Sum_probs=52.6

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      ||.++|.-....+-..+...|.+.|++|+....+..+..+   .+++....+..+-.++-+.+ --.+++++++.. ..+
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al~---~~~~~~~dliilD~~mp~~~-G~e~~~~ir~~~-~~~   75 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVE---KYKELKPDIVTMDITMPEMN-GIDAIKEIMKID-PNA   75 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHH---HHHHHCCSEEEEECSCGGGC-HHHHHHHHHHHC-TTC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHHHH---HHHhccCCEEEEecCCCCCC-HHHHHHHHHHhC-CCC
Confidence            6889999998889999999999999998766555544332   23333455555444443333 344667776665 556


Q ss_pred             cEEEec
Q 033396           93 NILVSS   98 (120)
Q Consensus        93 d~li~~   98 (120)
                      -+++..
T Consensus        76 pvi~ls   81 (118)
T d1u0sy_          76 KIIVCS   81 (118)
T ss_dssp             CEEEEE
T ss_pred             cEEEEE
Confidence            666554

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=92.40  E-value=0.13  Score=34.21  Aligned_cols=34  Identities=24%  Similarity=0.255  Sum_probs=30.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEee
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCS   44 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~   44 (120)
                      ++++++++|-|- |.+|..+|+.|.+.|++|+.++
T Consensus        33 ~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          33 GFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             SSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            588999999987 8999999999999999988775

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=92.33  E-value=0.63  Score=27.99  Aligned_cols=76  Identities=9%  Similarity=0.104  Sum_probs=42.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHC-----CCEEEEeeCChHHHHHHHHHHHh----cCCeEEEEeccCCCHHHHHHHHHHHH
Q 033396           15 TALVTGGTKGIGYAVVEELAAF-----GAIVHTCSRNETELNQRIQEWKS----KGLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~-----g~~v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      .+.|.||++.....+...++..     +.++++.|.+++.++.....+..    .+........  +|   ....+    
T Consensus         5 KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d---~~eal----   75 (167)
T d1u8xx1           5 SIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TD---PEEAF----   75 (167)
T ss_dssp             EEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SC---HHHHH----
T ss_pred             eEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CC---hhhcc----
Confidence            4667787543222233444432     24799999998876643333322    2333322221  22   22334    


Q ss_pred             hhcCCcccEEEecCCCCC
Q 033396           86 SQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        86 ~~~~g~id~li~~ag~~~  103 (120)
                          ..-|+||+.+|...
T Consensus        76 ----~~AD~Vvitag~~~   89 (167)
T d1u8xx1          76 ----TDVDFVMAHIRVGK   89 (167)
T ss_dssp             ----SSCSEEEECCCTTH
T ss_pred             ----CCCCEEEECCCcCC
Confidence                57899999999865

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=92.26  E-value=0.65  Score=28.51  Aligned_cols=59  Identities=20%  Similarity=0.076  Sum_probs=41.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcC-CeEEEEeccCCCH
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-LQVSGNACDLKIR   74 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~   74 (120)
                      +..+|=.||+.|.   ++..+++.|++|+.+|.++.-++...+.+...+ .++.++..|..+.
T Consensus        16 ~~rVLDiGcG~G~---~~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l   75 (231)
T d1vl5a_          16 NEEVLDVATGGGH---VANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQM   75 (231)
T ss_dssp             CCEEEEETCTTCH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CC
T ss_pred             cCEEEEecccCcH---HHHHHHHhCCEEEEEECCHHHHhhhhhcccccccccccccccccccc
Confidence            5788989988775   345677889999999999877666555554443 5677777777653

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.23  E-value=0.13  Score=32.80  Aligned_cols=33  Identities=21%  Similarity=0.276  Sum_probs=26.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      .+.|+|.|| |--|...|.+|++.|++|.++..+
T Consensus         5 ~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           5 TGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            345788887 666889999999999999998543

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=92.18  E-value=0.32  Score=32.30  Aligned_cols=80  Identities=13%  Similarity=0.064  Sum_probs=52.7

Q ss_pred             ccCcEEEEecC-CCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcC-CeEEEEeccCCCHHHHHHHHHHHHhhc
Q 033396           11 LKGMTALVTGG-TKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-LQVSGNACDLKIRAQREKLMETVSSQF   88 (120)
Q Consensus        11 ~~~~~~litGa-~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (120)
                      .+|+.+|=.++ +|+++.++    +..+.+|+.++.++..++...+.+...+ .++.++..|+.+.      ++.....-
T Consensus       144 ~~g~rVLDl~~gtG~~s~~~----a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~------~~~~~~~~  213 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFALHL----ALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDL------LRRLEKEG  213 (318)
T ss_dssp             CCEEEEEEETCTTTHHHHHH----HHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHH------HHHHHHTT
T ss_pred             hCCCeeeccCCCCcHHHHHH----HhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHH------hhhhHhhh
Confidence            57888885554 55565443    3446789999999988877777776666 4577887776432      22222222


Q ss_pred             CCcccEEEecCCC
Q 033396           89 DGKLNILVSSAQL  101 (120)
Q Consensus        89 ~g~id~li~~ag~  101 (120)
                       +++|.||.+.-.
T Consensus       214 -~~fD~Vi~DpP~  225 (318)
T d1wxxa2         214 -ERFDLVVLDPPA  225 (318)
T ss_dssp             -CCEEEEEECCCC
T ss_pred             -cCCCEEEEcCCc
Confidence             578999887644

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=92.09  E-value=0.18  Score=30.97  Aligned_cols=60  Identities=13%  Similarity=0.063  Sum_probs=43.7

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChH----------HHHHHHHHHHhcCCeEEEEeccCCCH
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET----------ELNQRIQEWKSKGLQVSGNACDLKIR   74 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~D~~~~   74 (120)
                      .++.++++.|.|. |.||+.+++.+...|++|+..++...          .++++.+     ..++..+.+..+..
T Consensus        40 ~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l~ell~-----~sDii~i~~plt~~  109 (188)
T d1sc6a1          40 FEARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLN-----MSDVVSLHVPENPS  109 (188)
T ss_dssp             CCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCCCTTCEECSCHHHHHH-----HCSEEEECCCSSTT
T ss_pred             ccccceEEEEeec-ccchhhhhhhcccccceEeeccccccchhhhhhhhhhHHHHHh-----hccceeecccCCcc
Confidence            4578999998866 89999999999999999999987532          1222222     24666777766653

>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Glutamate mutase, small subunit
species: Clostridium cochlearium [TaxId: 1494]

Probab=91.99  E-value=0.61  Score=27.09  Aligned_cols=76  Identities=8%  Similarity=-0.040  Sum_probs=49.9

Q ss_pred             cCcEEEEe---cCCCchHHHHHHHH-HHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCH-HHHHHHHHHHHh
Q 033396           12 KGMTALVT---GGTKGIGYAVVEEL-AAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR-AQREKLMETVSS   86 (120)
Q Consensus        12 ~~~~~lit---Ga~~~ig~~~a~~l-~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~   86 (120)
                      ++++++++   |-...+|..++..+ -..|++|+.++.+.+ .++..+.+.+.+.++..+..-.... ..+.++++++++
T Consensus         2 ~k~kVvi~~~~gD~H~lG~~mva~~l~~~G~~V~~LG~~~p-~e~iv~a~~~~~~d~v~lS~~~~~~~~~~~~~~~~l~~   80 (137)
T d1ccwa_           2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSP-QELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDE   80 (137)
T ss_dssp             CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEEC-HHHHHHHHHHHTCSEEEEEECSSTHHHHHTTHHHHHHH
T ss_pred             CCCEEEEEecCCChhHHHHHHHHHHHHHCCCeEEecccccC-HHHHHHHHHhcCCCEEEEeeccccchHHHHHHHHHHHH
Confidence            45666654   45677999977666 458999998876532 2334555555677888887755443 557777777776


Q ss_pred             hc
Q 033396           87 QF   88 (120)
Q Consensus        87 ~~   88 (120)
                      +.
T Consensus        81 ~~   82 (137)
T d1ccwa_          81 AG   82 (137)
T ss_dssp             TT
T ss_pred             hc
Confidence            53

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=91.97  E-value=0.65  Score=27.39  Aligned_cols=81  Identities=10%  Similarity=0.115  Sum_probs=46.9

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcC--CeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG--LQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      +|+.+.|.+.+||.|..++..+...|-++.  .-+++..+++.+.+....  .+..-+..+ .+++.+.++++.+.+.  
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~--~l~~~t~~~L~~~lp~~~~~~NPlD~~~~-~~~~~~~~~l~~~~~d--   76 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLA--TLEEKTIEELRSFLPPMAAVKNPVDMIAS-ARGEDYYRTAKLLLQD--   76 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEEC--CCCHHHHHHHHHHSCTTCEESSEEECCTT-CCHHHHHHHHHHHHHS--
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccC--CCCHHHHHHHHHhCCCcccCCCcccccCC-CCHHHHHHHHHHHHcC--
Confidence            578888889999999999999999996553  323332333333332221  122222223 3445566666655553  


Q ss_pred             CcccEEEe
Q 033396           90 GKLNILVS   97 (120)
Q Consensus        90 g~id~li~   97 (120)
                      +.+|.++.
T Consensus        77 ~~vd~v~v   84 (163)
T d2csua3          77 PNVDMLIA   84 (163)
T ss_dssp             TTCSEEEE
T ss_pred             CCcCEEEE
Confidence            56776543

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=91.94  E-value=0.97  Score=29.31  Aligned_cols=79  Identities=16%  Similarity=0.162  Sum_probs=51.6

Q ss_pred             CcEEEEecCCCc-hHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcC--CeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           13 GMTALVTGGTKG-IGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG--LQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        13 ~~~~litGa~~~-ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+.++-.|+++| |+.+++ +  ...++|+.+|.++..++-+.+.....+  .++.+...|..+.         ..... 
T Consensus       111 ~~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~-  177 (271)
T d1nv8a_         111 IKTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKF-  177 (271)
T ss_dssp             CCEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGT-
T ss_pred             ccEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------ccccc-
Confidence            345665665555 544443 3  356799999999988776666665543  4566677777543         12233 


Q ss_pred             CcccEEEecCCCCCc
Q 033396           90 GKLNILVSSAQLPYS  104 (120)
Q Consensus        90 g~id~li~~ag~~~~  104 (120)
                      +++|++|.|.-+...
T Consensus       178 ~~fDlIVsNPPYI~~  192 (271)
T d1nv8a_         178 ASIEMILSNPPYVKS  192 (271)
T ss_dssp             TTCCEEEECCCCBCG
T ss_pred             CcccEEEEcccccCc
Confidence            789999999877653

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.84  E-value=0.44  Score=29.65  Aligned_cols=62  Identities=10%  Similarity=0.108  Sum_probs=39.3

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRA   75 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   75 (120)
                      .|.++|=.||+.|.-......+...| +|+.++.++..++.+.+..+.. .++..+..|..++.
T Consensus        56 pg~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~~-~ni~~i~~d~~~~~  117 (209)
T d1nt2a_          56 GDERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRER-NNIIPLLFDASKPW  117 (209)
T ss_dssp             SSCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHHC-SSEEEECSCTTCGG
T ss_pred             CCCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhcc-CCceEEEeeccCcc
Confidence            46788888987775444333344444 8999999988776665554433 34555566665544

>d1t5la2 c.37.1.19 (A:415-595) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Nucleotide excision repair enzyme UvrB
species: Bacillus caldotenax [TaxId: 1395]

Probab=91.62  E-value=0.82  Score=27.78  Aligned_cols=80  Identities=14%  Similarity=0.141  Sum_probs=57.2

Q ss_pred             HHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccEEEecC----CCCCccce
Q 033396           32 ELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA----QLPYSQRK  107 (120)
Q Consensus        32 ~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~li~~a----g~~~~~~~  107 (120)
                      +..+.+..++++.......+.+...+...|-.+..++.+.++.+ -.++++++++   |.+++||..-    |+.-+.--
T Consensus        26 ~~~~~~~~~iif~~~~~~~~~~~~~l~~~g~~~~~~hg~~~~~e-R~~~l~~Fr~---g~~~vLVaTdv~~rGiDip~v~  101 (181)
T d1t5la2          26 ERVERNERTLVTTLTKKMAEDLTDYLKEAGIKVAYLHSEIKTLE-RIEIIRDLRL---GKYDVLVGINLLREGLDIPEVS  101 (181)
T ss_dssp             HHHHTTCEEEEECSSHHHHHHHHHHHHTTTCCEEEECSSCCHHH-HHHHHHHHHH---TSCSEEEESCCCSSSCCCTTEE
T ss_pred             HHHhcCCeEEEEeehhhhhHHHHHHHHhCCcceeEecCCccHHH-HHHHHHHHHC---CCCCEEEehhHHHccCCCCCCC
Confidence            33456778888888888888888888888999999999998755 4667777766   7899988775    33334333


Q ss_pred             eeeeccce
Q 033396          108 FFVKSRGP  115 (120)
Q Consensus       108 ~~~n~~g~  115 (120)
                      +-+|+..|
T Consensus       102 ~VI~~d~p  109 (181)
T d1t5la2         102 LVAILDAD  109 (181)
T ss_dssp             EEEETTTT
T ss_pred             EEEEecCC
Confidence            44554443

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=91.54  E-value=0.14  Score=31.68  Aligned_cols=37  Identities=22%  Similarity=0.243  Sum_probs=29.9

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      .+++||.|+|.|++.+ |..+|.++++.+++++.+.+.
T Consensus        28 ~~~~gK~V~VvG~G~S-a~dia~~~~~~~~~~~~~~~~   64 (235)
T d1w4xa2          28 VDFSGQRVGVIGTGSS-GIQVSPQIAKQAAELFVFQRT   64 (235)
T ss_dssp             CCCBTCEEEEECCSHH-HHHHHHHHHHHBSEEEEEESS
T ss_pred             CCCCCCEEEEECCCcc-HHHHHHHHHhhhccccccccc
Confidence            3589999999998554 789999999999887766554

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=91.47  E-value=0.13  Score=29.75  Aligned_cols=90  Identities=14%  Similarity=0.179  Sum_probs=51.0

Q ss_pred             ccCcEEEEecCC---CchHHHHHHHHHHCC-CEEEEeeCChHHH--HHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHH
Q 033396           11 LKGMTALVTGGT---KGIGYAVVEELAAFG-AIVHTCSRNETEL--NQRIQEWKSKGLQVSGNACDLKIRAQREKLMETV   84 (120)
Q Consensus        11 ~~~~~~litGa~---~~ig~~~a~~l~~~g-~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (120)
                      ++.|.+.|.|++   +.+|..+.+.|.+.+ .+|+.+.....+.  ......+.+....+..... ...++.+..+++++
T Consensus         6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G~~~y~sl~dlp~~vDlvvi-~vp~~~~~~~~~~~   84 (129)
T d2csua1           6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAII-VVPKRFVKDTLIQC   84 (129)
T ss_dssp             TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEE-CSCHHHHHHHHHHH
T ss_pred             CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccCCeEeecchhhcCCCCceEEE-ecChHHhHHHHHHH
Confidence            678899999998   779999999987766 5788775543221  0111122222211111111 23455666677666


Q ss_pred             HhhcCCcccEEEecCCCCC
Q 033396           85 SSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        85 ~~~~~g~id~li~~ag~~~  103 (120)
                      .+.  |--.+++..+|+..
T Consensus        85 ~~~--g~~~~vi~s~Gf~e  101 (129)
T d2csua1          85 GEK--GVKGVVIITAGFGE  101 (129)
T ss_dssp             HHH--TCCEEEECCCSSTT
T ss_pred             HHc--CCCEEEEecccccc
Confidence            554  23345666666654

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=91.46  E-value=1.1  Score=29.09  Aligned_cols=85  Identities=14%  Similarity=0.037  Sum_probs=48.2

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHH-----------------
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWKSKGLQVSGNACDLKIRAQR-----------------   77 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~-----------------   77 (120)
                      .+++.++|.-|.+++..-+..|.+++++ ..+...  ...+.++..|.++..+..+..+....                 
T Consensus        71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~--~k~~~l~~~Ga~vi~~~~~~~~~~~~a~~~a~~~g~~~~~~~~  148 (318)
T d1v71a1          71 GVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPE--AKVAATKGYGGQVIMYDRYKDDREKMAKEISEREGLTIIPPYD  148 (318)
T ss_dssp             CEEECCSSHHHHHHHHHHHHTTCCEEEEEETTCCH--HHHHHHHHTTCEEEEECTTTTCHHHHHHHHHHHHTCBCCCSSS
T ss_pred             eeeeeccchhhHHHHHhhcccccceeecccccccH--HHHHHHHHcCCcEEeccCCchHHHHHHHHHHHhcCCEecCCcc
Confidence            4778888889999888777777553333 222111  11223344455555544443333221                 


Q ss_pred             --------HHHHHHHHhhcCCcccEEEecCCCCC
Q 033396           78 --------EKLMETVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        78 --------~~~~~~~~~~~~g~id~li~~ag~~~  103 (120)
                              ..+..++.+++ +.+|.+|..+|...
T Consensus       149 ~~~~~~g~~t~~~Ei~~q~-~~~d~vvv~~G~GG  181 (318)
T d1v71a1         149 HPHVLAGQGTAAKELFEEV-GPLDALFVCLGGGG  181 (318)
T ss_dssp             SHHHHHHHTHHHHHHHHHH-CCCSEEEEECSSSH
T ss_pred             ccccccccchHHHHHHHhc-CCCCEEEEcCCchH
Confidence                    11234566666 67899988887755

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=91.00  E-value=0.62  Score=25.30  Aligned_cols=75  Identities=13%  Similarity=0.134  Sum_probs=48.0

Q ss_pred             ccCcEEEEecCCCchH-HHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGGTKGIG-YAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa~~~ig-~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      -+.|.+.+.|- +|+| .++|+.|.++|+.|...|+...+..   +.+.+.|..+.  ...-  ++           .. 
T Consensus         6 ~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~---~~L~~~Gi~v~--~g~~--~~-----------~i-   65 (96)
T d1p3da1           6 RRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVT---QRLAQAGAKIY--IGHA--EE-----------HI-   65 (96)
T ss_dssp             TTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHH---HHHHHTTCEEE--ESCC--GG-----------GG-
T ss_pred             hhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhh---hHHHHCCCeEE--ECCc--cc-----------cC-
Confidence            34567777775 4444 5589999999999999998754432   33344565432  2211  11           11 


Q ss_pred             CcccEEEecCCCCCcc
Q 033396           90 GKLNILVSSAQLPYSQ  105 (120)
Q Consensus        90 g~id~li~~ag~~~~~  105 (120)
                      .+.|.+|...++....
T Consensus        66 ~~~d~vV~S~AI~~~n   81 (96)
T d1p3da1          66 EGASVVVVSSAIKDDN   81 (96)
T ss_dssp             TTCSEEEECTTSCTTC
T ss_pred             CCCCEEEECCCcCCCC
Confidence            4579999999987753

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=90.96  E-value=0.18  Score=32.78  Aligned_cols=33  Identities=30%  Similarity=0.355  Sum_probs=22.6

Q ss_pred             cEEEEecCCCc--h--HHHHHHHHHHCCCEEEEeeCC
Q 033396           14 MTALVTGGTKG--I--GYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        14 ~~~litGa~~~--i--g~~~a~~l~~~g~~v~~~~~~   46 (120)
                      |.++|++|+.|  +  ..+++++|.++|++|.+++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            45666665433  2  335889999999999887643

>d1p5ja_ c.79.1.1 (A:) L-serine dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: L-serine dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.92  E-value=0.98  Score=29.45  Aligned_cols=28  Identities=18%  Similarity=0.266  Sum_probs=19.7

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCE
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAI   39 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~   39 (120)
                      .++.-+|+..+|.-|.++|..-+..|.+
T Consensus        52 ~g~~~vv~aSsGN~g~a~A~~a~~~G~~   79 (319)
T d1p5ja_          52 QGCAHFVCSSAGNAGMAAAYAARQLGVP   79 (319)
T ss_dssp             TTCCEEEECCSSHHHHHHHHHHHHHTCC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHhhhcccc
Confidence            3445677888888999988765555544

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=90.87  E-value=0.13  Score=32.40  Aligned_cols=31  Identities=26%  Similarity=0.242  Sum_probs=26.4

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      |+|.|| |--|...|.+|++.|++|.++.+++
T Consensus         3 V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           3 VAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             EEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            778887 6678899999999999999998753

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=90.79  E-value=0.16  Score=31.77  Aligned_cols=30  Identities=27%  Similarity=0.255  Sum_probs=25.3

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      ++|.|| |--|...|..|++.|.+|++++++
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~   34 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKG   34 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            667776 567889999999999999999765

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.72  E-value=0.97  Score=29.62  Aligned_cols=60  Identities=18%  Similarity=0.077  Sum_probs=40.4

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCH
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIR   74 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~   74 (120)
                      .+++++|-.|++.|+   ++..+++.|+ +|+.++.++. .....+.....  ..++.++..|+.+.
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~   94 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEV   94 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTC
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHc
Confidence            589999999998875   4566777885 6888887653 33333333332  45688888877664

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.68  E-value=0.83  Score=26.16  Aligned_cols=34  Identities=21%  Similarity=0.217  Sum_probs=26.4

Q ss_pred             cCcEEEEecCCCchHHHHHHHHH----HCCCEEEEeeCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELA----AFGAIVHTCSRN   46 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~----~~g~~v~~~~~~   46 (120)
                      ..+.++|.|| |.+|..+|..|+    +.|.+|.++.+.
T Consensus        36 ~~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~   73 (137)
T d1m6ia2          36 EVKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPE   73 (137)
T ss_dssp             HCSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccc
Confidence            4678888877 888888888775    468899888664

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=90.51  E-value=0.17  Score=32.85  Aligned_cols=30  Identities=23%  Similarity=0.371  Sum_probs=25.8

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      ++|.|+ |..|...|.++++.|.+|+++...
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~   48 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKE   48 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            677776 788899999999999999999753

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=90.32  E-value=0.14  Score=33.49  Aligned_cols=31  Identities=16%  Similarity=0.248  Sum_probs=26.2

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      ++|.|| |--|..+|++|++.|.+|.++....
T Consensus         4 v~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           4 YIIVGS-GLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEECC-SHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             EEEECC-cHHHHHHHHHHHhCCCcEEEEECCC
Confidence            677777 7778899999999999999997753

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=90.31  E-value=1.2  Score=28.61  Aligned_cols=23  Identities=22%  Similarity=0.144  Sum_probs=17.2

Q ss_pred             HHHHHhhcCCcccEEEecCCCCC
Q 033396           81 METVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        81 ~~~~~~~~~g~id~li~~ag~~~  103 (120)
                      ..++.+++++.+|.+|...|...
T Consensus       154 a~Ei~~q~~~~~d~vv~~~G~Gg  176 (292)
T d2bhsa1         154 GPEIWQQTGGRITHFVSSMGTTG  176 (292)
T ss_dssp             HHHHHHHTTTCCCEEEEECSSSH
T ss_pred             HHHhHHhcCCCCCcccccCCCcc
Confidence            35677777567999999888755

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=90.25  E-value=1.1  Score=26.77  Aligned_cols=78  Identities=12%  Similarity=0.062  Sum_probs=46.0

Q ss_pred             ccCcEEEEecC-CCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           11 LKGMTALVTGG-TKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        11 ~~~~~~litGa-~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+++.++=.+| +|.+|    .+.+++|++|+.++.++...+.+.+.++..+....+...|.   +.   .+....... 
T Consensus        40 ~~g~~vLDl~~G~G~~~----i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~---d~---~~~~~~~~~-  108 (171)
T d1ws6a1          40 PRRGRFLDPFAGSGAVG----LEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPV---EV---FLPEAKAQG-  108 (171)
T ss_dssp             TTCCEEEEETCSSCHHH----HHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCH---HH---HHHHHHHTT-
T ss_pred             cCCCeEEEeccccchhh----hhhhhccchhhhcccCHHHHhhhhHHHHhhccccceeeeeh---hc---ccccccccC-
Confidence            36777884454 44444    35566799999999998887766666655544333333322   21   122222222 


Q ss_pred             CcccEEEecC
Q 033396           90 GKLNILVSSA   99 (120)
Q Consensus        90 g~id~li~~a   99 (120)
                      .++|+++.+.
T Consensus       109 ~~fD~If~DP  118 (171)
T d1ws6a1         109 ERFTVAFMAP  118 (171)
T ss_dssp             CCEEEEEECC
T ss_pred             CccceeEEcc
Confidence            5789998875

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.99  E-value=0.67  Score=31.05  Aligned_cols=88  Identities=14%  Similarity=0.189  Sum_probs=51.7

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhcCCeEEEEeccC---------------------
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSKGLQVSGNACDL---------------------   71 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~---------------------   71 (120)
                      ...+|+.++|.-|.++|..-+..|.+++++-. +.++  ...+.++..|.+++.+..+.                     
T Consensus        97 ~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~--~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~  174 (355)
T d1jbqa_          97 GDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSS--EKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPN  174 (355)
T ss_dssp             TCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCH--HHHHHHHHTTCEEEECCC-------CCHHHHHHHHHHHSTT
T ss_pred             CceEEEecccchhhHHHHHHHhccCCeEEEeeccchH--HHHHHHHhcCCeEEEecccccchhhhhhhhHHHHHHHhccc
Confidence            45688888899999999988888877544432 2211  12223444455554432111                     


Q ss_pred             -------CCH-H---HHHHHHHHHHhhcCCcccEEEecCCCCC
Q 033396           72 -------KIR-A---QREKLMETVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        72 -------~~~-~---~~~~~~~~~~~~~~g~id~li~~ag~~~  103 (120)
                             .+. .   ....+..++.+++++.+|.+|..+|-..
T Consensus       175 ~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG  217 (355)
T d1jbqa_         175 SHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGG  217 (355)
T ss_dssp             EECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSH
T ss_pred             cccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCc
Confidence                   111 0   1233345777776568999999998765

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.96  E-value=0.2  Score=32.39  Aligned_cols=31  Identities=26%  Similarity=0.257  Sum_probs=25.4

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      |+|.|| |--|...|.+|++.|.+|.++.++.
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            567776 6668899999999999999997643

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=89.87  E-value=1.1  Score=27.15  Aligned_cols=65  Identities=3%  Similarity=0.014  Sum_probs=43.4

Q ss_pred             HHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccEEEecCCCCCc
Q 033396           31 EELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSAQLPYS  104 (120)
Q Consensus        31 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  104 (120)
                      +.+++.+.+|+.+|+++...+.... +  ...++.++..+.++.+.   .+....  . +++|.++..-|+...
T Consensus        34 ~~iL~~~~~viaiD~D~~ai~~a~~-~--~~~~~~~~~~~f~~~~~---~l~~~~--~-~~vdgIl~DLGvSs~   98 (182)
T d1wg8a2          34 RGILERGGRVIGLDQDPEAVARAKG-L--HLPGLTVVQGNFRHLKR---HLAALG--V-ERVDGILADLGVSSF   98 (182)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHH-T--CCTTEEEEESCGGGHHH---HHHHTT--C-SCEEEEEEECSCCHH
T ss_pred             HHHhcccCcEEEEhhhhhHHHHHhh-c--cccceeEeehHHHHHHH---HHHHcC--C-CccCEEEEEccCCHH
Confidence            4445557799999999877654432 2  34578888888876433   333321  2 679999999998763

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=89.85  E-value=0.19  Score=29.86  Aligned_cols=30  Identities=20%  Similarity=0.056  Sum_probs=23.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEe
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTC   43 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~   43 (120)
                      ++.++|.|+ |.+|..+|..|.+.|+++.++
T Consensus         3 ~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~   32 (185)
T d1q1ra1           3 NDNVVIVGT-GLAGVEVAFGLRASGWEGNIR   32 (185)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCCSEEE
T ss_pred             CCCEEEECC-cHHHHHHHHHHHHcCCceEEE
Confidence            567888877 889999999999999764433

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=89.82  E-value=0.36  Score=29.36  Aligned_cols=34  Identities=15%  Similarity=0.164  Sum_probs=27.2

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHH
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN   51 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~   51 (120)
                      +.|.| .|.+|..+|..|+ .|++|+.+|.++...+
T Consensus         3 I~ViG-lG~vGl~~a~~~a-~g~~V~g~Din~~~v~   36 (196)
T d1dlja2           3 IAVAG-SGYVGLSLGVLLS-LQNEVTIVDILPSKVD   36 (196)
T ss_dssp             EEEEC-CSHHHHHHHHHHT-TTSEEEEECSCHHHHH
T ss_pred             EEEEC-CChhHHHHHHHHH-CCCcEEEEECCHHHHH
Confidence            55565 6999999998776 6999999999876544

>d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thermotoga maritima [TaxId: 2336]

Probab=89.81  E-value=1.3  Score=28.62  Aligned_cols=23  Identities=13%  Similarity=0.101  Sum_probs=16.5

Q ss_pred             HHHHHhhcCCcccEEEecCCCCC
Q 033396           81 METVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        81 ~~~~~~~~~g~id~li~~ag~~~  103 (120)
                      ..++.+++++++|.+|.++|...
T Consensus       149 ~~Ei~~q~~~~~d~vv~~vG~Gg  171 (293)
T d1o58a_         149 GPEILKQMDYQIDAFVAGVGTGG  171 (293)
T ss_dssp             HHHHHHHTTTCCSEEEEECSSSH
T ss_pred             HHhhhhhcCCCCCEEEEecCcch
Confidence            34566666567899998888755

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=89.59  E-value=0.23  Score=30.32  Aligned_cols=30  Identities=17%  Similarity=0.207  Sum_probs=24.1

Q ss_pred             EEEecCCCchHHHHHHHHHHCCC-EEEEeeCC
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGA-IVHTCSRN   46 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~   46 (120)
                      |+|.|| |--|...|.+|++.|. +|.++.++
T Consensus         3 V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~   33 (347)
T d1b5qa1           3 VIVVGA-GMSGISAAKRLSEAGITDLLILEAT   33 (347)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             EEEECC-cHHHHHHHHHHHhCCCCcEEEEECC
Confidence            666776 6668899999999996 69998765

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=89.52  E-value=0.23  Score=31.71  Aligned_cols=38  Identities=21%  Similarity=0.311  Sum_probs=29.8

Q ss_pred             ccCcEEEEecCCCchHHH-----HHHHHHHCCCEEEEeeCChH
Q 033396           11 LKGMTALVTGGTKGIGYA-----VVEELAAFGAIVHTCSRNET   48 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~-----~a~~l~~~g~~v~~~~~~~~   48 (120)
                      -.++.++|+.|=||.|+.     +|..|+++|.+|.++|-++.
T Consensus        17 ~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          17 RNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             cCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            456667777668887776     47899999999999988753

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=89.43  E-value=0.95  Score=29.39  Aligned_cols=78  Identities=13%  Similarity=0.059  Sum_probs=54.2

Q ss_pred             cCcEEEEecC-CCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCC-eEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           12 KGMTALVTGG-TKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL-QVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        12 ~~~~~litGa-~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ++..++=.|+ +|.|+.+++.++  ...+|+.+|.++..++-+.+..+..+. ++.++..|.-++-            .+
T Consensus       108 ~~~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~~~~v~~~~~d~~~~~------------~~  173 (274)
T d2b3ta1         108 QPCRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL------------AG  173 (274)
T ss_dssp             SCCEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG------------TT
T ss_pred             cccceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhCcccceeeeccccccc------------CC
Confidence            3445776675 455777776654  347899999998887766666665553 5899999986532            01


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                      .++|++|.|.-+..
T Consensus       174 ~~fDlIvsNPPYi~  187 (274)
T d2b3ta1         174 QQFAMIVSNPPYID  187 (274)
T ss_dssp             CCEEEEEECCCCBC
T ss_pred             CceeEEEecchhhh
Confidence            57999999987754

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=89.43  E-value=1.6  Score=28.06  Aligned_cols=24  Identities=13%  Similarity=0.184  Sum_probs=18.5

Q ss_pred             HHHHHHhhcCCcccEEEecCCCCC
Q 033396           80 LMETVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        80 ~~~~~~~~~~g~id~li~~ag~~~  103 (120)
                      +..++.+++++.+|.+|.++|-..
T Consensus       156 i~~Ei~e~~~~~~d~vv~~vG~GG  179 (302)
T d1fcja_         156 TGPEIWEDTDGQVDVFISGVGTGG  179 (302)
T ss_dssp             HHHHHHHHTTTCCCEEEEECSSSH
T ss_pred             HHHHHHHhcCCCCCEEEEcCCCcc
Confidence            346777777568999999998855

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=89.38  E-value=0.44  Score=28.07  Aligned_cols=32  Identities=9%  Similarity=-0.020  Sum_probs=24.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC----CEEEEeeCC
Q 033396           15 TALVTGGTKGIGYAVVEELAAFG----AIVHTCSRN   46 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g----~~v~~~~~~   46 (120)
                      .+-|.||+|..|+.+.+.|+++.    .+++...++
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss   38 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTS   38 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecc
Confidence            57788999999999998877653    456655543

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=89.26  E-value=0.35  Score=29.82  Aligned_cols=34  Identities=21%  Similarity=0.279  Sum_probs=28.1

Q ss_pred             CcEEEEecCCCchHH-----HHHHHHHHCCCEEEEeeCC
Q 033396           13 GMTALVTGGTKGIGY-----AVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        13 ~~~~litGa~~~ig~-----~~a~~l~~~g~~v~~~~~~   46 (120)
                      +|++.|+++-||.|+     .+|..|++.|.+|.++|-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            578889998888665     4678899999999999855

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=89.21  E-value=1.2  Score=26.93  Aligned_cols=79  Identities=13%  Similarity=0.119  Sum_probs=49.2

Q ss_pred             ccCcEEE-EecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCHHHHHHHHHHHHh
Q 033396           11 LKGMTAL-VTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIRAQREKLMETVSS   86 (120)
Q Consensus        11 ~~~~~~l-itGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (120)
                      .+++.++ +-.++|++|.+    .+++|+ .|++++.+....+.+.+.+...  ..++.++..|+.+      .+++...
T Consensus        40 ~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~~------~l~~~~~  109 (182)
T d2fhpa1          40 FDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANR------ALEQFYE  109 (182)
T ss_dssp             CSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH------HHHHHHH
T ss_pred             cCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccchh------hhhhhcc
Confidence            5788877 44456667765    445676 5999999987766665555443  3367777777632      3333322


Q ss_pred             hcCCcccEEEecCC
Q 033396           87 QFDGKLNILVSSAQ  100 (120)
Q Consensus        87 ~~~g~id~li~~ag  100 (120)
                      .- .++|+++...=
T Consensus       110 ~~-~~fDlIflDPP  122 (182)
T d2fhpa1         110 EK-LQFDLVLLDPP  122 (182)
T ss_dssp             TT-CCEEEEEECCC
T ss_pred             cC-CCcceEEechh
Confidence            22 46888887663

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=89.11  E-value=0.85  Score=29.36  Aligned_cols=76  Identities=17%  Similarity=0.064  Sum_probs=52.1

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHH---CCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAA---FGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~---~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .++..+|=.||+.|.   ++..|++   .+++|+.+|.++..++...+.+...+.++.+...|+.+.+            
T Consensus        26 ~~~~~ILDiGcG~G~---~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~~~~~------------   90 (281)
T d2gh1a1          26 TKPVHIVDYGCGYGY---LGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIE------------   90 (281)
T ss_dssp             CSCCEEEEETCTTTH---HHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCTTTCC------------
T ss_pred             CCcCEEEEecCcCCH---HHHHHHHhCCCCCEEEEEecchhHhhhhhccccccccccccccccccccc------------
Confidence            356788988987663   3333333   5689999999988877777766666778888888886542            


Q ss_pred             cCCcccEEEecCCC
Q 033396           88 FDGKLNILVSSAQL  101 (120)
Q Consensus        88 ~~g~id~li~~ag~  101 (120)
                      +++++|+++.+..+
T Consensus        91 ~~~~fD~v~~~~~l  104 (281)
T d2gh1a1          91 LNDKYDIAICHAFL  104 (281)
T ss_dssp             CSSCEEEEEEESCG
T ss_pred             ccCCceEEEEehhh
Confidence            11457777766544

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.79  E-value=0.24  Score=31.67  Aligned_cols=31  Identities=16%  Similarity=0.094  Sum_probs=26.8

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      |+|.|| |=-|..+|..|++.|.+|.++++.+
T Consensus         5 V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           5 VAIIGA-GPSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            677887 4778899999999999999998864

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.77  E-value=0.38  Score=28.21  Aligned_cols=31  Identities=26%  Similarity=0.281  Sum_probs=24.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC---CEEEEeeC
Q 033396           15 TALVTGGTKGIGYAVVEELAAFG---AIVHTCSR   45 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g---~~v~~~~~   45 (120)
                      .+.|.||+|..|+.+.+.|.+++   .++..+.+
T Consensus         4 nVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s   37 (144)
T d2hjsa1           4 NVAVVGATGSVGEALVGLLDERDFPLHRLHLLAS   37 (144)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCCceEEEEEee
Confidence            48899999999999999998754   45665544

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=88.76  E-value=0.29  Score=30.91  Aligned_cols=31  Identities=19%  Similarity=0.366  Sum_probs=25.8

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      ++|.|| |--|...|.++++.|.+|.++++++
T Consensus         7 ViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~   37 (253)
T d2gqfa1           7 NIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGK   37 (253)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            677776 6667889999999999999998764

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=88.59  E-value=1.7  Score=26.80  Aligned_cols=59  Identities=10%  Similarity=-0.001  Sum_probs=42.0

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcC-CeEEEEeccCCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-LQVSGNACDLKI   73 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~   73 (120)
                      .+..+|=.||+.|.   ++..|++.+++|+.+|.++.-++...+.+...+ .++.++..|+.+
T Consensus        16 ~~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~   75 (234)
T d1xxla_          16 AEHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAES   75 (234)
T ss_dssp             TTCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTB
T ss_pred             CCCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhccccccccccccccccc
Confidence            45678888987774   445666778899999999877766655555443 457788887765

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=88.50  E-value=2  Score=27.41  Aligned_cols=61  Identities=18%  Similarity=0.217  Sum_probs=44.7

Q ss_pred             cCcEEEEecCCCc-hHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCC
Q 033396           12 KGMTALVTGGTKG-IGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKI   73 (120)
Q Consensus        12 ~~~~~litGa~~~-ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~   73 (120)
                      .|.+++=.|+++| +...+++.+... .+|+.++++++.++.+.+.+++.  ..++.+...|+.+
T Consensus        85 pG~rVLEiG~GsG~lt~~la~~v~~~-g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~  148 (250)
T d1yb2a1          85 PGMDILEVGVGSGNMSSYILYALNGK-GTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD  148 (250)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHTTS-SEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT
T ss_pred             CcCEEEEeeeeCcHHHHHHHHHhCCC-cEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeec
Confidence            5678888887655 666677766544 49999999998888777777654  3567777777765

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=88.29  E-value=0.26  Score=32.24  Aligned_cols=30  Identities=23%  Similarity=0.316  Sum_probs=25.4

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      ++|.|+ |.-|...|.+++++|++|+++.+.
T Consensus        26 VvVIG~-G~aGl~aA~~la~~G~~V~llEk~   55 (322)
T d1d4ca2          26 VVIIGS-GGAGLAAAVSARDAGAKVILLEKE   55 (322)
T ss_dssp             EEEECS-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            677766 777889999999999999999763

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.24  E-value=1.6  Score=26.00  Aligned_cols=40  Identities=18%  Similarity=0.107  Sum_probs=28.3

Q ss_pred             EEEecCCCchHHHHHHHHHHC-CCEEE-EeeCChHHHHHHHHH
Q 033396           16 ALVTGGTKGIGYAVVEELAAF-GAIVH-TCSRNETELNQRIQE   56 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~-g~~v~-~~~~~~~~~~~~~~~   56 (120)
                      +.|.|+ |.+|+..++.+... +.+|+ +++++++..+...++
T Consensus         4 i~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~   45 (184)
T d1ydwa1           4 IGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATA   45 (184)
T ss_dssp             EEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHH
T ss_pred             EEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhc
Confidence            567786 67999999888775 46655 568887766555443

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=88.00  E-value=0.32  Score=32.19  Aligned_cols=30  Identities=17%  Similarity=0.001  Sum_probs=25.1

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      |+|.|+ |.-|..+|.+|++.|.+|+++.+.
T Consensus         5 VIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG   34 (367)
T d1n4wa1           5 AVVIGT-GYGAAVSALRLGEAGVQTLMLEMG   34 (367)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEeCc-CHHHHHHHHHHHHCcCeEEEEecC
Confidence            566665 677889999999999999999774

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=87.94  E-value=0.41  Score=29.47  Aligned_cols=33  Identities=27%  Similarity=0.308  Sum_probs=26.9

Q ss_pred             cEEEEecCCCchHH-----HHHHHHHHCCCEEEEeeCC
Q 033396           14 MTALVTGGTKGIGY-----AVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        14 ~~~litGa~~~ig~-----~~a~~l~~~g~~v~~~~~~   46 (120)
                      |++.|+++-||.|+     .+|..|++.|.+|.++|-+
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D   39 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDAD   39 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            57889988888665     4678899999999998765

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=87.82  E-value=1.7  Score=28.19  Aligned_cols=32  Identities=22%  Similarity=0.380  Sum_probs=22.1

Q ss_pred             EEEEecCCCc-hH--HHHHHHHHHCCCEEEEeeCC
Q 033396           15 TALVTGGTKG-IG--YAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        15 ~~litGa~~~-ig--~~~a~~l~~~g~~v~~~~~~   46 (120)
                      .++.+++++| |=  .+++++|.++|++|.++...
T Consensus         3 il~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~~   37 (391)
T d1pn3a_           3 VLITGCGSRGDTEPLVALAARLRELGADARMCLPP   37 (391)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEECG
T ss_pred             EEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEECh
Confidence            3444666644 22  24899999999999888743

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.42  E-value=1.7  Score=28.54  Aligned_cols=60  Identities=17%  Similarity=0.041  Sum_probs=40.5

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCH
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIR   74 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~   74 (120)
                      .+++++|-.||+.|+   ++..+++.|+ +|+.++.++ ..+...+.....  ..++.++..|+.+.
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l   99 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDV   99 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTS
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhc
Confidence            589999999998774   4556677885 688888775 333333333332  46788888887664

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=87.24  E-value=0.13  Score=30.22  Aligned_cols=76  Identities=14%  Similarity=-0.037  Sum_probs=42.2

Q ss_pred             CCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc---------CCeEEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 033396           21 GTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK---------GLQVSGNACDLKIRAQREKLMETVSSQFDGK   91 (120)
Q Consensus        21 a~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   91 (120)
                      |+|.+|+++++.|.+.+..+.+.+|+.+..+++.+.....         ..++.++.  +.+ +.+..++.++.    .+
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~~~~~~DiVil~--v~d-~~i~~v~~~l~----~~   78 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVI--VPD-RYIKTVANHLN----LG   78 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEEC--SCT-TTHHHHHTTTC----CS
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccccccchhhhhccCcEEEEe--ccc-hhhhHHHhhhc----cc
Confidence            4588999999988764444567899988888777754321         22333333  222 33444444331    12


Q ss_pred             ccEEEecCCCCC
Q 033396           92 LNILVSSAQLPY  103 (120)
Q Consensus        92 id~li~~ag~~~  103 (120)
                      =.++|++++...
T Consensus        79 ~~ivi~~s~~~~   90 (153)
T d2i76a2          79 DAVLVHCSGFLS   90 (153)
T ss_dssp             SCCEEECCSSSC
T ss_pred             ceeeeecccchh
Confidence            246788877654

>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.12  E-value=0.73  Score=27.38  Aligned_cols=37  Identities=16%  Similarity=0.299  Sum_probs=32.9

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      +++|+++++.|..+.+..+++..+...|.++.++.-.
T Consensus         1 sl~gl~Ia~VGD~~nv~~Sli~~l~~~g~~v~~~~P~   37 (163)
T d1pvva2           1 TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPE   37 (163)
T ss_dssp             CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEeccc
Confidence            3689999999998889999999999999999988653

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=87.09  E-value=2.6  Score=27.29  Aligned_cols=25  Identities=24%  Similarity=0.191  Sum_probs=18.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCE
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAI   39 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~   39 (120)
                      ..+|+-++|.-|.+++..-...|.+
T Consensus        62 ~~vv~~SsGN~g~a~A~~a~~~G~~   86 (310)
T d1y7la1          62 KEIVDATSGNTGIALAYVAAARGYK   86 (310)
T ss_dssp             CEEEESCCSHHHHHHHHHHHHHTCC
T ss_pred             ceeeeecCCCchHHHHHHHHHhhcc
Confidence            5677888888888888766666644

>d1hv8a2 c.37.1.19 (A:211-365) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Putative DEAD box RNA helicase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=87.09  E-value=1.7  Score=25.19  Aligned_cols=68  Identities=18%  Similarity=0.227  Sum_probs=47.6

Q ss_pred             HHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccEEEecC
Q 033396           28 AVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA   99 (120)
Q Consensus        28 ~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~li~~a   99 (120)
                      .+.+.+...+.++++...+....+.+...+...+..+..+..+.+. .+-...++++..   |.+++||.+.
T Consensus        19 ~L~~ll~~~~~k~IIF~~s~~~~~~l~~~L~~~g~~~~~~~~~~~~-~~r~~~~~~f~~---~~~~ilv~T~   86 (155)
T d1hv8a2          19 ALCRLLKNKEFYGLVFCKTKRDTKELASMLRDIGFKAGAIHGDLSQ-SQREKVIRLFKQ---KKIRILIATD   86 (155)
T ss_dssp             HHHHHHCSTTCCEEEECSSHHHHHHHHHHHHHTTCCEEEECSSSCH-HHHHHHHHHHHT---TSSSEEEECT
T ss_pred             HHHHHHccCCCCEEEEECchHHHHHHHhhhcccccccccccccchh-hhhhhhhhhhhc---ccceeeeehh
Confidence            3455454555677777777777778888888888888888888754 444566666655   6678877763

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=86.89  E-value=1.5  Score=24.44  Aligned_cols=33  Identities=18%  Similarity=0.258  Sum_probs=27.7

Q ss_pred             cEEEEecCC---CchHHHHHHHHHHCCCEEEEeeCC
Q 033396           14 MTALVTGGT---KGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        14 ~~~litGa~---~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      |.+.|.|++   +..|..+.+.|.+.|++|+.+...
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~   37 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPN   37 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccc
Confidence            678999987   458999999999999998877543

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=86.69  E-value=0.48  Score=31.03  Aligned_cols=30  Identities=23%  Similarity=0.305  Sum_probs=24.5

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      ++|.|+ |-=|..+|.+|++.|.+|+++.+.
T Consensus         7 viIVGs-G~aG~v~A~~La~~G~kVlvLEaG   36 (379)
T d2f5va1           7 VVIVGS-GPIGCTYARELVGAGYKVAMFDIG   36 (379)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHhhCCCeEEEEecC
Confidence            667776 445889999999999999999763

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=86.68  E-value=2.1  Score=25.70  Aligned_cols=76  Identities=17%  Similarity=0.121  Sum_probs=49.2

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc---CCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK---GLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      ..+++++=.||+.|.   ++..+++.+.+|+.++.++...+...+.+...   ...+.++..|..+..      .     
T Consensus        51 ~~~~~VLDiGcG~G~---~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~------~-----  116 (194)
T d1dusa_          51 DKDDDILDLGCGYGV---IGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV------K-----  116 (194)
T ss_dssp             CTTCEEEEETCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC------T-----
T ss_pred             CCCCeEEEEeecCCh---hHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhh------c-----
Confidence            468889988887662   34456677889999999987766555544433   345777777775421      0     


Q ss_pred             cCCcccEEEecCCC
Q 033396           88 FDGKLNILVSSAQL  101 (120)
Q Consensus        88 ~~g~id~li~~ag~  101 (120)
                       ++.+|+++.|.-+
T Consensus       117 -~~~fD~Ii~~~p~  129 (194)
T d1dusa_         117 -DRKYNKIITNPPI  129 (194)
T ss_dssp             -TSCEEEEEECCCS
T ss_pred             -cCCceEEEEcccE
Confidence             0456777766543

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=86.54  E-value=0.48  Score=27.96  Aligned_cols=23  Identities=26%  Similarity=0.365  Sum_probs=21.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC
Q 033396           15 TALVTGGTKGIGYAVVEELAAFG   37 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g   37 (120)
                      .+.|.||+|..|..+.+.|.++.
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~   25 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEEST   25 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCC
T ss_pred             EEEEECCCcHHHHHHHHHHHcCC
Confidence            58899999999999999999885

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=86.54  E-value=0.43  Score=29.12  Aligned_cols=30  Identities=20%  Similarity=0.300  Sum_probs=26.0

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      ++|.|| |-.|...|.++++.|.+|.++.++
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            567776 778999999999999999999875

>d1im5a_ c.33.1.3 (A:) Pyrazinamidase/nicotinamidase {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Isochorismatase-like hydrolases
superfamily: Isochorismatase-like hydrolases
family: Isochorismatase-like hydrolases
domain: Pyrazinamidase/nicotinamidase
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=86.49  E-value=2  Score=25.34  Aligned_cols=25  Identities=20%  Similarity=0.114  Sum_probs=12.5

Q ss_pred             CCCchHHHHHHHHHHCC-CEEEEeeC
Q 033396           21 GTKGIGYAVVEELAAFG-AIVHTCSR   45 (120)
Q Consensus        21 a~~~ig~~~a~~l~~~g-~~v~~~~~   45 (120)
                      .+...+..+...|-+.| -+|++++-
T Consensus       102 ~s~f~~t~L~~~Lr~~gi~~liv~G~  127 (179)
T d1im5a_         102 YSGFEGTDLAKILRGNGVKRVYICGV  127 (179)
T ss_dssp             CSTTTTSSHHHHHHHTTCCEEEEEEE
T ss_pred             ccccchhHHHHHHHHCCCCEEEEEEe
Confidence            34444555555555555 33555544

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=86.45  E-value=0.84  Score=26.87  Aligned_cols=34  Identities=18%  Similarity=0.174  Sum_probs=25.4

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCE-EEEeeCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRN   46 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~-v~~~~~~   46 (120)
                      .++.++|.|| |..|...|..+.++|++ |+++.|.
T Consensus        44 ~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr   78 (153)
T d1gtea3          44 IRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRK   78 (153)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred             CCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeC
Confidence            4555777765 77888999999999965 7677664

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=86.40  E-value=0.35  Score=31.60  Aligned_cols=30  Identities=23%  Similarity=0.285  Sum_probs=25.3

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      ++|.|+ |..|...|.++++.|.+|+++...
T Consensus        22 VvVIGa-G~aGl~AA~~aa~~G~~V~vlEK~   51 (317)
T d1qo8a2          22 VLVVGA-GSAGFNASLAAKKAGANVILVDKA   51 (317)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            667766 788999999999999999999653

>d3bula2 c.23.6.1 (A:741-896) Methionine synthase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Methionine synthase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=86.38  E-value=2  Score=25.32  Aligned_cols=89  Identities=12%  Similarity=0.098  Sum_probs=56.4

Q ss_pred             ccCcEEEEe--cCCCchHHHHHHHHHH-CCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCH-HHHHHHHHHHHh
Q 033396           11 LKGMTALVT--GGTKGIGYAVVEELAA-FGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIR-AQREKLMETVSS   86 (120)
Q Consensus        11 ~~~~~~lit--Ga~~~ig~~~a~~l~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~   86 (120)
                      .+||.++=|  |-...||..++..+.+ .|++|+-++.+-+. +++.+.+.+....+..+.+=.+.. ..+..+++.+++
T Consensus         5 ~~gkivi~tv~gD~HdiG~~iv~~~l~~~G~~Vi~LG~~~p~-e~~~~~~~~~~~d~i~lS~l~~~~~~~~~~~~~~l~~   83 (156)
T d3bula2           5 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPA-EKILRTAKEVNADLIGLSGLITPSLDEMVNVAKEMER   83 (156)
T ss_dssp             CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCH-HHHHHHHHHHTCSEEEEECCSTHHHHHHHHHHHHHHH
T ss_pred             cCCEEEEEeeCCChhhHHHHHHHHHHHHCCCEEEECCCCCCH-HHHHHHHHhhCCCEEEEecccccchHHHHHHHHHHHh
Confidence            356544433  4456799998887766 77999998876433 334555555677888888766544 457777777777


Q ss_pred             hcCCcccEEEecCCC
Q 033396           87 QFDGKLNILVSSAQL  101 (120)
Q Consensus        87 ~~~g~id~li~~ag~  101 (120)
                      .. .++-+++-.+.+
T Consensus        84 ~g-~~~~vivGG~~~   97 (156)
T d3bula2          84 QG-FTIPLLIGGATT   97 (156)
T ss_dssp             TT-CCSCEEEESTTC
T ss_pred             cc-ccceEEEecccc
Confidence            53 334444444444

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=86.35  E-value=1.7  Score=24.26  Aligned_cols=81  Identities=17%  Similarity=0.237  Sum_probs=51.3

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHH-HHHHHHHHHHhhcCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRA-QREKLMETVSSQFDG   90 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~g   90 (120)
                      +..+++|.--...+...+.+.|.+.|++|..+....+.+    +.+......+.  -+|+.-++ +--.+++++++.. .
T Consensus         2 ~k~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~a~----~~l~~~~~dli--i~D~~mp~~~G~el~~~l~~~~-~   74 (123)
T d1krwa_           2 QRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGNEVL----AALASKTPDVL--LSDIRMPGMDGLALLKQIKQRH-P   74 (123)
T ss_dssp             CCCEEEEESSSHHHHHHHHHHHHHTTCEEEEESSSHHHH----HHHTTCCCSEE--EECCSSSSSTTHHHHHHHHHHS-S
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCHHHHH----HHHHhCCCCEE--EehhhcCCchHHHHHHHHHHhC-C
Confidence            345799999999999999999999999998776554333    33333344444  45554442 1234566666665 4


Q ss_pred             cccEEEecC
Q 033396           91 KLNILVSSA   99 (120)
Q Consensus        91 ~id~li~~a   99 (120)
                      .+-+++..+
T Consensus        75 ~~piI~~t~   83 (123)
T d1krwa_          75 MLPVIIMTA   83 (123)
T ss_dssp             SCCEEESCC
T ss_pred             CCeEEEEec
Confidence            455555443

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=86.08  E-value=0.46  Score=31.49  Aligned_cols=30  Identities=23%  Similarity=0.154  Sum_probs=25.2

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      ++|.|+ |.-|..+|.+|++.|.+|.++.+.
T Consensus        10 vIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG   39 (370)
T d3coxa1          10 ALVIGS-GYGGAVAALRLTQAGIPTQIVEMG   39 (370)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEeCC
Confidence            677776 567889999999999999999764

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=86.08  E-value=0.8  Score=29.18  Aligned_cols=34  Identities=32%  Similarity=0.492  Sum_probs=28.6

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHH-CCCEEEEee
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAA-FGAIVHTCS   44 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~-~g~~v~~~~   44 (120)
                      ++++|+++|-|- |.+|..+++.|++ .|++|+.++
T Consensus        29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vs   63 (239)
T d1gtma1          29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVS   63 (239)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecc
Confidence            378999999988 7799999999986 588877664

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=85.95  E-value=2  Score=26.86  Aligned_cols=58  Identities=19%  Similarity=0.078  Sum_probs=40.4

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLK   72 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~   72 (120)
                      +++++|=.||+.|-   ....|++.| .+|+.+|.++..++.+.+.....  ..++.++..|..
T Consensus        24 ~~~~VLDlGCG~G~---~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~   84 (252)
T d1ri5a_          24 RGDSVLDLGCGKGG---DLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSY   84 (252)
T ss_dssp             TTCEEEEETCTTTT---THHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTT
T ss_pred             CcCEEEEecccCcH---HHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchh
Confidence            57789989987662   234556666 57999999998877776655543  346777777764

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=85.78  E-value=3.3  Score=27.23  Aligned_cols=77  Identities=13%  Similarity=0.044  Sum_probs=49.2

Q ss_pred             cCcEEEEec-CCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc---CCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           12 KGMTALVTG-GTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK---GLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        12 ~~~~~litG-a~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      +++.+|=.. ++|+++.+    +++.|++|+.++.+...++...+.+..+   ..++.++..|+.      +.+++....
T Consensus       132 ~~~rVLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~~  201 (309)
T d2igta1         132 RPLKVLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREERR  201 (309)
T ss_dssp             SCCEEEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHHH
T ss_pred             CCCeEEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhhc
Confidence            467787444 45555544    3457899999999988776666655443   246788887763      233333333


Q ss_pred             cCCcccEEEecC
Q 033396           88 FDGKLNILVSSA   99 (120)
Q Consensus        88 ~~g~id~li~~a   99 (120)
                      - .++|+||.+.
T Consensus       202 ~-~~fD~IilDP  212 (309)
T d2igta1         202 G-STYDIILTDP  212 (309)
T ss_dssp             T-CCBSEEEECC
T ss_pred             C-CCCCEEEECC
Confidence            2 6799998864

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=85.61  E-value=0.62  Score=28.04  Aligned_cols=29  Identities=14%  Similarity=0.209  Sum_probs=24.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHC-CCEEEEe
Q 033396           15 TALVTGGTKGIGYAVVEELAAF-GAIVHTC   43 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~-g~~v~~~   43 (120)
                      .+.|.||+|..|+.+.+.|.++ ..++..+
T Consensus         3 kVaIiGATGyvG~eLlrlL~~HP~~ei~~l   32 (179)
T d2g17a1           3 NTLIVGASGYAGAELVSYVNRHPHMTITAL   32 (179)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTEEEEEE
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCCceEee
Confidence            4889999999999999999997 4555433

>d1wbha1 c.1.10.1 (A:1-213) KDPG aldolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: KDPG aldolase
species: Escherichia coli [TaxId: 562]

Probab=85.59  E-value=2.8  Score=26.13  Aligned_cols=81  Identities=16%  Similarity=0.081  Sum_probs=54.2

Q ss_pred             Cccccccccc-c-cCcE-EEEecCCCchHHHHHHHHHHCCCEEE-EeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHH
Q 033396            1 MSDFREKRWS-L-KGMT-ALVTGGTKGIGYAVVEELAAFGAIVH-TCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQ   76 (120)
Q Consensus         1 ~~~~~~~~~~-~-~~~~-~litGa~~~ig~~~a~~l~~~g~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   76 (120)
                      |.++.....+ + .++. .++++-+..-...+++.|.+.|.+++ ++-|+ +...+.++.+.+...++.+=.+-+.+.++
T Consensus         1 m~~~~~~~~~~l~~~~iipvlr~~~~~~a~~~~~al~~~Gi~~iEitl~t-p~a~~~I~~l~~~~p~~~vGaGTV~~~~~   79 (213)
T d1wbha1           1 MKNWKTSAESILTTGPVVPVIVVKKLEHAVPMAKALVAGGVRVLNVTLRT-ECAVDAIRAIAKEVPEAIVGAGTVLNPQQ   79 (213)
T ss_dssp             CCCCSSCHHHHHHSCSEEEEECCSSGGGHHHHHHHHHHTTCCEEEEESCS-TTHHHHHHHHHHHCTTSEEEEESCCSHHH
T ss_pred             CCCcccCHHHHHHhCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEeCCC-hhHHHHHHHHHHHCCCCeeeccccccHHH
Confidence            5555543332 2 3333 56888888889999999999997744 55554 44455666666554456666678999999


Q ss_pred             HHHHHH
Q 033396           77 REKLME   82 (120)
Q Consensus        77 ~~~~~~   82 (120)
                      ++++++
T Consensus        80 ~~~a~~   85 (213)
T d1wbha1          80 LAEVTE   85 (213)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            888765

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=85.57  E-value=2.9  Score=26.47  Aligned_cols=60  Identities=8%  Similarity=-0.034  Sum_probs=40.0

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIR   74 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~   74 (120)
                      .+..+|=.||+.|.   ++..|+++ |++|+.++.++..++...+.+...  ..++.++.+|..+.
T Consensus        67 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l  129 (282)
T d2o57a1          67 RQAKGLDLGAGYGG---AARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI  129 (282)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC
T ss_pred             CCCEEEEeCCCCcH---HHhhhhccCCcEEEEEeccchhhhhhhcccccccccccccccccccccc
Confidence            57789988886653   33344443 789999999887766555554443  34677777877653

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=85.52  E-value=1.7  Score=26.58  Aligned_cols=81  Identities=10%  Similarity=0.077  Sum_probs=51.7

Q ss_pred             cCcEEEEecCCCc-hHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCC----------------
Q 033396           12 KGMTALVTGGTKG-IGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLK----------------   72 (120)
Q Consensus        12 ~~~~~litGa~~~-ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~----------------   72 (120)
                      .+..+|=.||+.| +...+++++...+++|+.+|.++.-++...+.+...  ...+.....|..                
T Consensus        39 ~~~~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~i~~~~~l  118 (225)
T d1im8a_          39 ADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHVEIKNASMVILNFTL  118 (225)
T ss_dssp             TTCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTCCCCSEEEEEEESCG
T ss_pred             CCCEEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhccccccceeeEEeeec
Confidence            5668998998665 455566666667899999999988776666555432  233444444432                


Q ss_pred             ---CHHHHHHHHHHHHhhcCCcccE
Q 033396           73 ---IRAQREKLMETVSSQFDGKLNI   94 (120)
Q Consensus        73 ---~~~~~~~~~~~~~~~~~g~id~   94 (120)
                         ++++..++++++.+.+  ++++
T Consensus       119 ~~~~~~d~~~~l~~i~~~L--kpgG  141 (225)
T d1im8a_         119 QFLPPEDRIALLTKIYEGL--NPNG  141 (225)
T ss_dssp             GGSCGGGHHHHHHHHHHHE--EEEE
T ss_pred             cccChhhHHHHHHHHHHhC--CCCc
Confidence               2334567777777766  3444

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.50  E-value=2.7  Score=25.91  Aligned_cols=57  Identities=12%  Similarity=-0.083  Sum_probs=39.0

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhcCCeEEEEecc
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGNACD   70 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   70 (120)
                      ..|+.+|=.|++.|+   .+..+++.+ .+|+.++.++.-++...+.....+..+..+..|
T Consensus        52 ~~g~~VLdIGcG~G~---~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~~  109 (229)
T d1zx0a1          52 SKGGRVLEVGFGMAI---AASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGL  109 (229)
T ss_dssp             TTCEEEEEECCTTSH---HHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESC
T ss_pred             cCCCeEEEeeccchH---HHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhccccccccccc
Confidence            367899999998875   455666655 679999999877766655554445555554443

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=85.45  E-value=0.6  Score=30.54  Aligned_cols=33  Identities=24%  Similarity=0.293  Sum_probs=27.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      --++|.|| |--|.+++++|.+.|.+|+++++++
T Consensus         8 ~dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~   40 (298)
T d1w4xa1           8 VDVLVVGA-GFSGLYALYRLRELGRSVHVIETAG   40 (298)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CCEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCC
Confidence            34888887 6778899999999999999998753

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=85.31  E-value=3  Score=26.54  Aligned_cols=59  Identities=7%  Similarity=-0.077  Sum_probs=41.7

Q ss_pred             cCcEEEEecCC-CchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCC
Q 033396           12 KGMTALVTGGT-KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKI   73 (120)
Q Consensus        12 ~~~~~litGa~-~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~   73 (120)
                      .|.+++-.||+ |+++..++++   .+++|+.++.++...+.+.+.+...  ...+.++..|..+
T Consensus       107 ~g~~VlD~~aG~G~~~l~~a~~---~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~  168 (260)
T d2frna1         107 PDELVVDMFAGIGHLSLPIAVY---GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRD  168 (260)
T ss_dssp             TTCEEEETTCTTTTTHHHHHHH---TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTT
T ss_pred             CccEEEECcceEcHHHHHHHHh---CCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHH
Confidence            57888888764 5566555543   2368999999998777666655554  3568888888765

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=85.10  E-value=0.67  Score=30.33  Aligned_cols=33  Identities=18%  Similarity=0.132  Sum_probs=25.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHCC--CEEEEeeCCh
Q 033396           14 MTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNE   47 (120)
Q Consensus        14 ~~~litGa~~~ig~~~a~~l~~~g--~~v~~~~~~~   47 (120)
                      |.|+|.|| |--|..+|..|++.|  .+|+++.++.
T Consensus         5 KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           5 RKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            56888877 555668888898877  5899998764

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=85.07  E-value=2.2  Score=24.63  Aligned_cols=76  Identities=8%  Similarity=0.047  Sum_probs=48.6

Q ss_pred             cccCcEEEEecC-CCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcC--CeEEEEeccCCCHHHHHHHHHHHH
Q 033396           10 SLKGMTALVTGG-TKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKG--LQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus        10 ~~~~~~~litGa-~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      .++|+.++=.++ +|.+|.+    .+++|+ +|++++.++...+.+.+.+...+  .++.++..|+.+      .+..  
T Consensus        12 ~~~g~~vlDl~~GtG~~~ie----a~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l~~--   79 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAIE----AVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AIDC--   79 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHHH----HHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HHHH--
T ss_pred             hCCCCeEEEcCCccCHHHHH----HHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------cccc--
Confidence            368899985555 4556553    455674 79999999887766666665543  457788877532      1211  


Q ss_pred             hhcCCcccEEEecC
Q 033396           86 SQFDGKLNILVSSA   99 (120)
Q Consensus        86 ~~~~g~id~li~~a   99 (120)
                       .. ++.|+++.+.
T Consensus        80 -~~-~~fDiIf~DP   91 (152)
T d2esra1          80 -LT-GRFDLVFLDP   91 (152)
T ss_dssp             -BC-SCEEEEEECC
T ss_pred             -cc-cccceeEech
Confidence             11 5678887764

>d1trba2 c.3.1.5 (A:119-244) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=85.05  E-value=0.81  Score=25.96  Aligned_cols=38  Identities=18%  Similarity=0.246  Sum_probs=31.7

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      ..+++|.++|.|+ |.-+..-|..|++.+.+|+++.|.+
T Consensus        23 ~~~~~k~V~VvGg-GdsA~e~A~~L~~~a~~V~li~r~~   60 (126)
T d1trba2          23 FFYRNQKVAVIGG-GNTAVEEALYLSNIASEVHLIHRRD   60 (126)
T ss_dssp             GGGTTSEEEEECS-SHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred             HHhCCCEEEEECC-CHHHHHHHHHHhhcCCcEEEEeecc
Confidence            3478999999998 6667788899999999999998754

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=84.99  E-value=0.38  Score=30.62  Aligned_cols=33  Identities=21%  Similarity=0.350  Sum_probs=25.5

Q ss_pred             cEEEEecCCCchHH-----HHHHHHHHCCCEEEEeeCCh
Q 033396           14 MTALVTGGTKGIGY-----AVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        14 ~~~litGa~~~ig~-----~~a~~l~~~g~~v~~~~~~~   47 (120)
                      |++.|+| =||.|+     .++..|++.|++|.++|-++
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~   39 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDP   39 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence            4677887 566555     46779999999999998874

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=84.72  E-value=1.1  Score=29.39  Aligned_cols=24  Identities=13%  Similarity=-0.082  Sum_probs=18.1

Q ss_pred             HHHHHHHhhcCCcccEEEecCCCCC
Q 033396           79 KLMETVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        79 ~~~~~~~~~~~g~id~li~~ag~~~  103 (120)
                      ....++.++. +.+|.+|..+|...
T Consensus       164 t~~~Ei~~q~-~~~D~vv~~~G~GG  187 (331)
T d1tdja1         164 TLALELLQQD-AHLDRVFVPVGGGG  187 (331)
T ss_dssp             HHHHHHHHHC-TTCCEEEEECSSSH
T ss_pred             hHHHHHHHhc-CCCCEEEEeCChhH
Confidence            3455677777 78999999998765

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=84.50  E-value=1.6  Score=26.82  Aligned_cols=56  Identities=11%  Similarity=0.043  Sum_probs=38.4

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLK   72 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   72 (120)
                      ++++.+|=.||+.|.   +++.|++.|++|+.++.++..++...+..   ...+.++..|..
T Consensus        19 ~~~~~VLDiGcG~G~---~~~~l~~~g~~v~giD~s~~~i~~a~~~~---~~~~~~~~~~~~   74 (225)
T d2p7ia1          19 FRPGNLLELGSFKGD---FTSRLQEHFNDITCVEASEEAISHAQGRL---KDGITYIHSRFE   74 (225)
T ss_dssp             CCSSCEEEESCTTSH---HHHHHTTTCSCEEEEESCHHHHHHHHHHS---CSCEEEEESCGG
T ss_pred             CCCCcEEEEeCCCcH---HHHHHHHcCCeEEEEeCcHHHhhhhhccc---cccccccccccc
Confidence            577889989987764   45678888999999999887665444332   234555555543

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.38  E-value=0.84  Score=28.39  Aligned_cols=31  Identities=19%  Similarity=0.158  Sum_probs=25.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCC-EEEEeeCC
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGA-IVHTCSRN   46 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~-~v~~~~~~   46 (120)
                      .|+|.|| |--|..+|..|++.|. .|.++.+.
T Consensus         3 ~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~   34 (288)
T d3c96a1           3 DILIAGA-GIGGLSCALALHQAGIGKVTLLESS   34 (288)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESS
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCC
Confidence            4788887 5668899999999994 88888775

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=83.99  E-value=2.8  Score=24.89  Aligned_cols=75  Identities=13%  Similarity=0.162  Sum_probs=43.2

Q ss_pred             EEEEecCCCchHHH--HHHHHHHC----CCEEEEeeCChHHHHHHHHHHH----hcCCeEEEEeccCCCHHHHHHHHHHH
Q 033396           15 TALVTGGTKGIGYA--VVEELAAF----GAIVHTCSRNETELNQRIQEWK----SKGLQVSGNACDLKIRAQREKLMETV   84 (120)
Q Consensus        15 ~~litGa~~~ig~~--~a~~l~~~----g~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (120)
                      .+.|.|| |+.|..  +...++..    +.+++++|.+++.++.....+.    ..+.......  .+|   .+..+   
T Consensus         4 KI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~--~td---~~eaL---   74 (171)
T d1obba1           4 KIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEK--TMN---LDDVI---   74 (171)
T ss_dssp             EEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEE--ESC---HHHHH---
T ss_pred             EEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEE--eCC---hhhcc---
Confidence            4677886 666654  44445442    3589999999877654333332    2333333322  233   22334   


Q ss_pred             HhhcCCcccEEEecCCCCC
Q 033396           85 SSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        85 ~~~~~g~id~li~~ag~~~  103 (120)
                           ...|++|+++++..
T Consensus        75 -----~dad~Vv~~~~~g~   88 (171)
T d1obba1          75 -----IDADFVINTAMVGG   88 (171)
T ss_dssp             -----TTCSEEEECCCTTH
T ss_pred             -----cCCCeEeeeccccc
Confidence                 56788888887755

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=83.73  E-value=0.53  Score=28.36  Aligned_cols=34  Identities=6%  Similarity=-0.175  Sum_probs=27.1

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      +.+.++|.|| |-.|...|..+++.|.+++++++.
T Consensus         4 ~~~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~~   37 (192)
T d1vdca1           4 HNTRLCIVGS-GPAAHTAAIYAARAELKPLLFEGW   37 (192)
T ss_dssp             EEEEEEEECC-SHHHHHHHHHHHHTTCCCEEECCS
T ss_pred             ccceEEEECC-CHHHHHHHHHHHHcCCcEEEEEee
Confidence            4566888887 457888999999999998888753

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=83.65  E-value=3.9  Score=26.24  Aligned_cols=58  Identities=17%  Similarity=0.051  Sum_probs=39.0

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHH-CCCEEEEeeCChHHHHHHHHHHHhcC--CeEEEEeccCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAA-FGAIVHTCSRNETELNQRIQEWKSKG--LQVSGNACDLK   72 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~-~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~   72 (120)
                      .|..+|=.||+-|   .++..+++ .|++|+.++.++...+...+.+.+.+  ..+.....|..
T Consensus        52 ~g~~VLDiGCG~G---~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d~~  112 (280)
T d2fk8a1          52 PGMTLLDIGCGWG---TTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWE  112 (280)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGG
T ss_pred             CCCEEEEecCCch---HHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhhhhh
Confidence            5778999998755   23444554 48999999999888776666665543  34555555543

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=83.63  E-value=1  Score=27.32  Aligned_cols=29  Identities=24%  Similarity=0.173  Sum_probs=23.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC-CEEEEe
Q 033396           15 TALVTGGTKGIGYAVVEELAAFG-AIVHTC   43 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g-~~v~~~   43 (120)
                      .+.|.||+|..|..+++.|+++- .++..+
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l   32 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYL   32 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEe
Confidence            47899999999999999999865 455544

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=83.57  E-value=0.096  Score=32.48  Aligned_cols=24  Identities=17%  Similarity=0.077  Sum_probs=20.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCE
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAI   39 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~   39 (120)
                      .++|.|| |-+|..+|.+|+++|.+
T Consensus         2 kV~VIGa-Gi~GlstA~~L~~~G~~   25 (246)
T d1kifa1           2 RVVVIGA-GVIGLSTALCIHERYHS   25 (246)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHHTT
T ss_pred             EEEEECc-hHHHHHHHHHHHHCCCC
Confidence            3777877 88999999999999864

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=83.30  E-value=4.3  Score=26.43  Aligned_cols=25  Identities=16%  Similarity=0.017  Sum_probs=18.2

Q ss_pred             HHHHHHHhhcCCcccEEEecCCCCC
Q 033396           79 KLMETVSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        79 ~~~~~~~~~~~g~id~li~~ag~~~  103 (120)
                      .+..++.+++.+.+|.+|..+|-..
T Consensus       158 t~~~EI~~q~~~~~D~vv~~vGgGg  182 (320)
T d1z7wa1         158 TTGPEIWKGTGGKIDGFVSGIGTGG  182 (320)
T ss_dssp             THHHHHHHHTTTCCCEEEEECSSSH
T ss_pred             hHHHHHHHhccCCCCEEEeCCCCCc
Confidence            3445777776567999999888755

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=83.21  E-value=0.48  Score=28.40  Aligned_cols=34  Identities=18%  Similarity=0.070  Sum_probs=27.3

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      +++-++|.|+ |-.|...|..+++.|.+|+++.+.
T Consensus         4 k~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~   37 (190)
T d1trba1           4 KHSKLLILGS-GPAGYTAAVYAARANLQPVLITGM   37 (190)
T ss_dssp             EEEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHcCCceEEEEee
Confidence            3456788887 557889999999999999988754

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=82.95  E-value=0.7  Score=28.07  Aligned_cols=30  Identities=20%  Similarity=0.336  Sum_probs=25.3

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      ++|.|+ |-.|...|..+++.|.+|+++++.
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~   35 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKR   35 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEec
Confidence            567777 566999999999999999999764

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=82.87  E-value=3.8  Score=25.53  Aligned_cols=45  Identities=13%  Similarity=0.081  Sum_probs=30.4

Q ss_pred             cCcEEEEecCCCc-hHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH
Q 033396           12 KGMTALVTGGTKG-IGYAVVEELAAFGAIVHTCSRNETELNQRIQEW   57 (120)
Q Consensus        12 ~~~~~litGa~~~-ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~   57 (120)
                      .|.++|=.||+.| .-..+++..-. +.+|+.++.++..++.+.+..
T Consensus        73 pG~~VLDlGaGsG~~t~~la~~VG~-~G~V~aVD~s~~~l~~a~~~a  118 (227)
T d1g8aa_          73 PGKSVLYLGIASGTTASHVSDIVGW-EGKIFGIEFSPRVLRELVPIV  118 (227)
T ss_dssp             TTCEEEEETTTSTTHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHH
T ss_pred             CCCEEEEeccCCCHHHHHHHHHhCC-CCEEEEEeCcHHHHHHHHHHH
Confidence            5678887777555 55555554433 349999999988776665544

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=82.81  E-value=3.8  Score=25.55  Aligned_cols=87  Identities=8%  Similarity=0.118  Sum_probs=55.7

Q ss_pred             ccCcEEEEecCCCchHHH-HHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcC--CeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           11 LKGMTALVTGGTKGIGYA-VVEELAAFGAIVHTCSRNETELNQRIQEWKSKG--LQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~-~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .+.|.+|=.|+.-|.... +++.+. .+.+|+.++.++...+...+.+...|  .++..+..|..  +.+.++... ...
T Consensus        58 ~~~k~iLEiGT~~GyStl~la~al~-~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~a~--~~L~~l~~~-~~~  133 (227)
T d1susa1          58 INAKNTMEIGVYTGYSLLATALAIP-EDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPAL--PVLDEMIKD-EKN  133 (227)
T ss_dssp             HTCCEEEEECCGGGHHHHHHHHHSC-TTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHH--HHHHHHHHC-GGG
T ss_pred             cCCCcEEEecchhhhhHHHHHhhCC-CCcEEEEEeccchhHHHHHHHHHHhccccceeeeehHHH--HHHHHHHhc-ccc
Confidence            578899999987776555 455554 45699999999877666666665543  45666666652  334444432 112


Q ss_pred             cCCcccEEEecCCCC
Q 033396           88 FDGKLNILVSSAQLP  102 (120)
Q Consensus        88 ~~g~id~li~~ag~~  102 (120)
                      . +++|.++.-+--.
T Consensus       134 ~-~~fD~iFiDa~k~  147 (227)
T d1susa1         134 H-GSYDFIFVDADKD  147 (227)
T ss_dssp             T-TCBSEEEECSCST
T ss_pred             C-CceeEEEeccchh
Confidence            2 6789888876443

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.40  E-value=3.9  Score=25.33  Aligned_cols=85  Identities=16%  Similarity=0.197  Sum_probs=52.1

Q ss_pred             ccCcEEEEecCCCchHHH-HHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           11 LKGMTALVTGGTKGIGYA-VVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~-~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .+.|.+|=.|+.-|.... +++.+.. +.+|+.++.++...+...+.+...  ..++..+.+|..  +.+..++..   .
T Consensus        58 ~~~k~vLEiGt~~GyStl~~a~al~~-~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gda~--e~l~~~~~~---~  131 (219)
T d2avda1          58 IQAKKALDLGTFTGYSALALALALPA-DGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPAL--ETLDELLAA---G  131 (219)
T ss_dssp             TTCCEEEEECCTTSHHHHHHHTTSCT-TCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHH--HHHHHHHHT---T
T ss_pred             cCCCeEEEEechhhHHHHHHHHhCCC-CceEEEEeechhHHHHHHHHHHhcCccceEEEEEeehh--hcchhhhhh---c
Confidence            578899999987665443 5555544 559999999987766666655544  355666666553  223333321   1


Q ss_pred             cCCcccEEEecCCC
Q 033396           88 FDGKLNILVSSAQL  101 (120)
Q Consensus        88 ~~g~id~li~~ag~  101 (120)
                      ..+++|.++..+.-
T Consensus       132 ~~~~fD~ifiD~dk  145 (219)
T d2avda1         132 EAGTFDVAVVDADK  145 (219)
T ss_dssp             CTTCEEEEEECSCS
T ss_pred             ccCCccEEEEeCCH
Confidence            11567877776644

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=82.25  E-value=1  Score=27.24  Aligned_cols=32  Identities=19%  Similarity=0.170  Sum_probs=25.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCC-CEEEEee
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFG-AIVHTCS   44 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~~   44 (120)
                      .-.+.|.||+|..|+.+++.|.++- .++..+.
T Consensus         5 kikVaIlGATGyvG~elirLL~~HP~~ei~~l~   37 (183)
T d2cvoa1           5 EVRIAVLGASGYTGAEIVRLLANHPQFRIKVMT   37 (183)
T ss_dssp             CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             ccEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence            3358899999999999999999975 4554443

>d2eyqa5 c.37.1.19 (A:779-989) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Transcription-repair coupling factor, TRCF
species: Escherichia coli [TaxId: 562]

Probab=82.23  E-value=4  Score=25.36  Aligned_cols=66  Identities=12%  Similarity=0.230  Sum_probs=46.0

Q ss_pred             HHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCHHHHHHHHHHHHhhcCCcccEEEecC
Q 033396           29 VVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILVSSA   99 (120)
Q Consensus        29 ~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~li~~a   99 (120)
                      +-+++ .+|..|+.+.......++..+.+.+.  ..++..+++..++ ++.++++.++.+   |.+|+||...
T Consensus        24 I~~El-~rGgQvy~V~p~I~~~e~~~~~l~~~~p~~~i~~lHGkm~~-~eke~im~~F~~---g~~~ILv~Tt   91 (211)
T d2eyqa5          24 ILREI-LRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRE-RELERVMNDFHH---QRFNVLVCTT   91 (211)
T ss_dssp             HHHHH-TTTCEEEEECCCSSCHHHHHHHHHHHCTTSCEEECCSSCCH-HHHHHHHHHHHT---TSCCEEEESS
T ss_pred             HHHHH-HcCCeEEEEEcCccchhhHHHHHHHhCCceEEEEEEeccCH-HHHHHHHHHHHc---CCcceEEEeh
Confidence            33444 46778888876655555555555543  5678888888865 557888888877   7899999876

>d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing protein METT10D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Methyltransferase 10 domain
domain: Methyltransferase 10 domain containing protein METT10D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.11  E-value=3.1  Score=26.27  Aligned_cols=84  Identities=10%  Similarity=-0.004  Sum_probs=53.8

Q ss_pred             CcEEEEecC-CCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           13 GMTALVTGG-TKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        13 ~~~~litGa-~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      ...++=.|+ +|.|+..++.++-  +++++.++.++..++-+.+-++..  ..++..+..+..+.     ++..+.....
T Consensus        62 ~~~~LDiGtGsg~I~~~l~~~~~--~~~~~~~Di~~~al~~A~~N~~~n~l~~~~~~~~~~~~~~-----~~~~~~~~~~  134 (250)
T d2h00a1          62 LRRGIDIGTGASCIYPLLGATLN--GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTL-----LMDALKEESE  134 (250)
T ss_dssp             CCEEEEESCTTTTHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCS-----STTTSTTCCS
T ss_pred             cceEEEeCCCchHHHHHHHHhCC--CccccceecCHHHHHHHHHHHHHhCCCcceeeeeeccHHh-----hhhhhhhccc
Confidence            346776775 5669988888774  689999999998876666655544  45566665544321     1111111112


Q ss_pred             CcccEEEecCCCCC
Q 033396           90 GKLNILVSSAQLPY  103 (120)
Q Consensus        90 g~id~li~~ag~~~  103 (120)
                      +.+|.+|.|.=+..
T Consensus       135 ~~fD~ivsNPPY~~  148 (250)
T d2h00a1         135 IIYDFCMCNPPFFA  148 (250)
T ss_dssp             CCBSEEEECCCCC-
T ss_pred             CceeEEEecCcccc
Confidence            57999999998875

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=82.08  E-value=4.9  Score=26.27  Aligned_cols=81  Identities=17%  Similarity=0.062  Sum_probs=52.2

Q ss_pred             cCcEEEEecC-CCchHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhcC--CeEEEEeccCCCHHHHHHHHHHHHhh
Q 033396           12 KGMTALVTGG-TKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKG--LQVSGNACDLKIRAQREKLMETVSSQ   87 (120)
Q Consensus        12 ~~~~~litGa-~~~ig~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (120)
                      .++.+|=.++ +|+++..++    +.|+ +|+.++.++..++...+.+...+  .++.++..|+.+      .+......
T Consensus       145 ~g~~VLDl~~g~G~~si~~a----~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~------~~~~~~~~  214 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIHAA----IAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFE------EMEKLQKK  214 (324)
T ss_dssp             TTCEEEETTCTTTHHHHHHH----HTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH------HHHHHHHT
T ss_pred             CCCeeecccCcccchhhhhh----hcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhh------hhHHHHhc
Confidence            4778886665 455555443    4564 79999999988877777666654  467777777642      22222222


Q ss_pred             cCCcccEEEecCCCCC
Q 033396           88 FDGKLNILVSSAQLPY  103 (120)
Q Consensus        88 ~~g~id~li~~ag~~~  103 (120)
                      - .++|.+|.+.-...
T Consensus       215 ~-~~fD~Vi~DpP~~~  229 (324)
T d2as0a2         215 G-EKFDIVVLDPPAFV  229 (324)
T ss_dssp             T-CCEEEEEECCCCSC
T ss_pred             c-CCCCchhcCCcccc
Confidence            2 68999998776543

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=82.00  E-value=0.78  Score=29.76  Aligned_cols=30  Identities=23%  Similarity=0.127  Sum_probs=24.9

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      ++|.|+ |.-|...|.++++.|++|+++...
T Consensus         8 VvVIG~-G~AGl~AAl~aa~~G~~V~liEK~   37 (336)
T d2bs2a2           8 SLVIGG-GLAGLRAAVATQQKGLSTIVLSLI   37 (336)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEecC
Confidence            777775 677889999999999999988653

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.92  E-value=1.1  Score=27.34  Aligned_cols=30  Identities=20%  Similarity=0.376  Sum_probs=25.1

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      ++|.|+ |--|...|.++++.|.+|++++..
T Consensus         8 viVIG~-GpAGl~aA~~aa~~G~kV~lie~~   37 (233)
T d1v59a1           8 VVIIGG-GPAGYVAAIKAAQLGFNTACVEKR   37 (233)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEec
Confidence            567777 556999999999999999999764

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=81.85  E-value=2.7  Score=23.17  Aligned_cols=81  Identities=9%  Similarity=0.063  Sum_probs=49.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 033396           13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKL   92 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   92 (120)
                      +|.++|.--...+-..+.+.|.+.|++|..+....+.++    .+......+...-..+-+.+. -.+++++++.. ..+
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~eal~----~~~~~~~dlillD~~mP~~~G-~el~~~lr~~~-~~~   74 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQALD----IVTKERPDLVLLDMKIPGMDG-IEILKRMKVID-ENI   74 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHH----HHHHHCCSEEEEESCCTTCCH-HHHHHHHHHHC-TTC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCHHHHHH----HHHhCCCCEEEEeccCCCCCH-HHHHHHHHHhC-CCC
Confidence            367888888888888888999999999887664443332    233334455444333333332 34666666655 445


Q ss_pred             cEEEecC
Q 033396           93 NILVSSA   99 (120)
Q Consensus        93 d~li~~a   99 (120)
                      -+++..+
T Consensus        75 pvi~lt~   81 (119)
T d1peya_          75 RVIIMTA   81 (119)
T ss_dssp             EEEEEES
T ss_pred             cEEEEec
Confidence            5555543

>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=81.68  E-value=0.81  Score=28.86  Aligned_cols=30  Identities=27%  Similarity=0.318  Sum_probs=24.7

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      ++|.|+ |--|...|.++++.|.+|.++++.
T Consensus         4 viVIG~-G~aG~~aA~~aa~~G~~V~liE~~   33 (259)
T d1onfa1           4 LIVIGG-GSGGMAAARRAARHNAKVALVEKS   33 (259)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCeEEEEecC
Confidence            466776 444889999999999999999875

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=81.56  E-value=1  Score=26.04  Aligned_cols=30  Identities=13%  Similarity=0.295  Sum_probs=23.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396           15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      .++|.|+ |.+|..+|..|.+ +.+|.++.+.
T Consensus         2 rVvIIGg-G~~G~e~A~~l~~-~~~Vtvv~~~   31 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLSQ-TYEVTVIDKE   31 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHTT-TSEEEEECSS
T ss_pred             eEEEECC-cHHHHHHHHHHHc-CCCEEEEecc
Confidence            4667776 7899999999865 6789888764

>d1fl2a2 c.3.1.5 (A:326-451) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=81.35  E-value=1.5  Score=24.73  Aligned_cols=38  Identities=24%  Similarity=0.178  Sum_probs=29.8

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      ..+++|.++|.|+ |.-+..-|..|++...+|.++.|.+
T Consensus        26 ~~~~gk~V~VvGg-G~sA~~~A~~L~~~a~~V~li~r~~   63 (126)
T d1fl2a2          26 PLFKGKRVAVIGG-GNSGVEAAIDLAGIVEHVTLLEFAP   63 (126)
T ss_dssp             GGGBTCEEEEECC-SHHHHHHHHHHHTTBSEEEEECSSS
T ss_pred             hhcCCceEEEEeC-CHHHHHHHHhhhccCCceEEEeccc
Confidence            3589999999997 4455667778888888999997753

>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain
species: Fungus (Phanerochaete chrysosporium) [TaxId: 5306]

Probab=81.33  E-value=0.95  Score=30.08  Aligned_cols=30  Identities=20%  Similarity=0.256  Sum_probs=24.5

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      ++|.|+ |.-|..+|.+|++.|.+|.++.+.
T Consensus         5 ~IIVGs-G~aG~v~A~rLae~g~~VlvLEaG   34 (360)
T d1kdga1           5 YIIVGA-GPGGIIAADRLSEAGKKVLLLERG   34 (360)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHhhCCCeEEEEEcc
Confidence            567776 466888999999999999999664

>d1miob_ c.92.2.3 (B:) Nitrogenase iron-molybdenum protein, beta chain {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: Nitrogenase iron-molybdenum protein
domain: Nitrogenase iron-molybdenum protein, beta chain
species: Clostridium pasteurianum [TaxId: 1501]

Probab=81.24  E-value=5.3  Score=27.36  Aligned_cols=80  Identities=13%  Similarity=0.078  Sum_probs=47.8

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEee--CChHHH-HHHHHHHHhcCC-eEEEEeccCCCHHHHHHHHHHHH
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCS--RNETEL-NQRIQEWKSKGL-QVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~--~~~~~~-~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      .+.||.++|.|. .....++++.|.+.|..+..+.  ...... +...+.+.+.+. ...+  .+-.|..++.+.+.+  
T Consensus       308 ~l~Gkrv~I~~~-~~~~~~l~~~L~elg~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v--~~~~d~~e~~~~i~~--  382 (457)
T d1miob_         308 YLQGKKVALLGD-PDEIIALSKFIIELGAIPKYVVTGTPGMKFQKEIDAMLAEAGIEGSKV--KVEGDFFDVHQWIKN--  382 (457)
T ss_dssp             HHTTCEEEEEEC-HHHHHHHHHHHHTTTCEEEEEEESSCCHHHHHHHHHHHHTTTCCSCEE--EESCBHHHHHHHHHH--
T ss_pred             HhCCCEEEEEcC-cHHHHHHHHHHHHcCCeeeeeecCCCCHHHHHHHHHHHHhcCCCCCEE--EeCCCHHHHHHHHHh--
Confidence            368898888775 4578889999999997655442  222333 333333444332 1211  233555666666654  


Q ss_pred             hhcCCcccEEEec
Q 033396           86 SQFDGKLNILVSS   98 (120)
Q Consensus        86 ~~~~g~id~li~~   98 (120)
                          .++|++|-+
T Consensus       383 ----~~pDLvig~  391 (457)
T d1miob_         383 ----EGVDLLISN  391 (457)
T ss_dssp             ----SCCSEEEES
T ss_pred             ----cCCCEEEEC
Confidence                578988865

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.05  E-value=3.4  Score=25.46  Aligned_cols=89  Identities=12%  Similarity=0.048  Sum_probs=53.3

Q ss_pred             ccCcEEEEecCCCchHHH-HHH---HHHHCC-----CEEEEeeCChHHHHHHHHH--------------HHhcCCeEEEE
Q 033396           11 LKGMTALVTGGTKGIGYA-VVE---ELAAFG-----AIVHTCSRNETELNQRIQE--------------WKSKGLQVSGN   67 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~-~a~---~l~~~g-----~~v~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~   67 (120)
                      ...-+.+|-||+|.+..- +..   +|...|     ..|+.++|++...++..+.              +...-.++.++
T Consensus        18 ~~~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~   97 (203)
T d1qkia1          18 SDTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYV   97 (203)
T ss_dssp             SCCEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECC
T ss_pred             CCCcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhccc
Confidence            456679999999998764 332   334444     5688888865322222221              11223568888


Q ss_pred             eccCCCHHHHHHHHHHHHhhc-CCcccEEEecC
Q 033396           68 ACDLKIRAQREKLMETVSSQF-DGKLNILVSSA   99 (120)
Q Consensus        68 ~~D~~~~~~~~~~~~~~~~~~-~g~id~li~~a   99 (120)
                      .+|++++++..++-+...+.. +..-+-+++-|
T Consensus        98 ~~d~~~~~~~~~L~~~l~~~~~~~~~~rifYLA  130 (203)
T d1qkia1          98 AGQYDDAASYQRLNSHMNALHLGSQANRLFYLA  130 (203)
T ss_dssp             BCCTTCHHHHHHHHHHHHHTTTTTTSEEEEEEC
T ss_pred             cCcCCChhhHHHHHHHHHHHhcCCCcceEEEEe
Confidence            999999998887765554421 11234455544

>d1vb3a1 c.79.1.1 (A:1-428) Threonine synthase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Escherichia coli [TaxId: 562]

Probab=80.99  E-value=3.3  Score=28.53  Aligned_cols=71  Identities=15%  Similarity=0.124  Sum_probs=43.1

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCC-CEEEEe-eCCh-HHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFG-AIVHTC-SRNE-TELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVS   85 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g-~~v~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (120)
                      +++..+++.++|.-|.+.+..++..+ .+++++ -... ...++  .++...+.+++.+.+|= +-++++++++++.
T Consensus       124 ~~~~~Il~ATSGDTG~Aa~~a~~~~~~i~~~vl~P~g~vS~~Q~--~Qmtt~g~nv~vi~V~G-~fDDcq~lvk~~f  197 (428)
T d1vb3a1         124 DKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQE--KLFCTLGGNIETVAIDG-DFDACQALVKQAF  197 (428)
T ss_dssp             TCCEEEEEECSSSHHHHHHHHTTTCTTEEEEEEEETTCSCHHHH--HHHHSCCTTEEEEEEES-CHHHHHHHHHHGG
T ss_pred             cccceeeecCCCCcchhHHHHHhCccccceEEEecCCCCcHHHH--HHHhhccCCceEEecCC-ChhHHHHHHHHHh
Confidence            44566777888899999999998865 555555 3332 23332  23334566776666552 3455666666554

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=80.95  E-value=0.97  Score=28.75  Aligned_cols=34  Identities=15%  Similarity=0.180  Sum_probs=27.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHH-CCCEEEEeeCCh
Q 033396           13 GMTALVTGGTKGIGYAVVEELAA-FGAIVHTCSRNE   47 (120)
Q Consensus        13 ~~~~litGa~~~ig~~~a~~l~~-~g~~v~~~~~~~   47 (120)
                      ..=++|.|| |--|...|.+|++ .|.+|.++++.+
T Consensus        33 e~DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~   67 (278)
T d1rp0a1          33 ETDVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSV   67 (278)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHccCCeEEEEecCC
Confidence            344888888 6678899999987 499999998753

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=80.88  E-value=0.87  Score=27.78  Aligned_cols=30  Identities=20%  Similarity=0.275  Sum_probs=25.7

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      ++|.|+ |-.|...|..+++.|.+|.++.+.
T Consensus         8 lvVIG~-GpaGl~aA~~aa~~G~~V~liE~~   37 (220)
T d1lvla1           8 LLIIGG-GPGGYVAAIRAGQLGIPTVLVEGQ   37 (220)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            677775 678889999999999999999875

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=80.85  E-value=0.71  Score=28.39  Aligned_cols=29  Identities=28%  Similarity=0.339  Sum_probs=23.9

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeC
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSR   45 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~   45 (120)
                      ++|.|++ --|...|.++++.|.+|.++..
T Consensus         6 viVIG~G-paGl~aA~~aa~~G~kV~viE~   34 (235)
T d1h6va1           6 LIIIGGG-SGGLAAAKEAAKFDKKVMVLDF   34 (235)
T ss_dssp             EEEECCS-HHHHHHHHHHGGGCCCEEEECC
T ss_pred             EEEECCC-HHHHHHHHHHHHCCCeEEEEec
Confidence            5677774 4488999999999999999974

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=80.77  E-value=5.2  Score=25.74  Aligned_cols=59  Identities=19%  Similarity=0.043  Sum_probs=39.7

Q ss_pred             cCcEEEEecCCCc-hHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhc--CCeEEEEeccCCC
Q 033396           12 KGMTALVTGGTKG-IGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGNACDLKI   73 (120)
Q Consensus        12 ~~~~~litGa~~~-ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~   73 (120)
                      .|..+|=.||+-| +...+++   +.|++|+.+..++...+...+...+.  ..++.+...|..+
T Consensus        62 ~G~~VLDiGCG~G~~a~~~a~---~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d~~~  123 (285)
T d1kpga_          62 PGMTLLDVGCGWGATMMRAVE---KYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQ  123 (285)
T ss_dssp             TTCEEEEETCTTSHHHHHHHH---HHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGG
T ss_pred             CCCEEEEecCcchHHHHHHHh---cCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhhhhc
Confidence            5678898888544 3333444   36899999999988776666655443  3567777777543

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=80.75  E-value=2  Score=25.12  Aligned_cols=30  Identities=10%  Similarity=-0.015  Sum_probs=23.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC----CEEEEee
Q 033396           15 TALVTGGTKGIGYAVVEELAAFG----AIVHTCS   44 (120)
Q Consensus        15 ~~litGa~~~ig~~~a~~l~~~g----~~v~~~~   44 (120)
                      .+.|.||+|..|+.+.+.|.++.    .++..++
T Consensus         2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~s   35 (147)
T d1mb4a1           2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFS   35 (147)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEE
T ss_pred             EEEEECCccHHHHHHHHHHHhcCCCCceEEEEec
Confidence            47899999999999999887643    4555543

>d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=80.66  E-value=2.4  Score=26.06  Aligned_cols=38  Identities=26%  Similarity=0.283  Sum_probs=28.8

Q ss_pred             ccccCcEEEEecCCCchHHHHHHHHH--------------------HCC-CEEEEeeCCh
Q 033396            9 WSLKGMTALVTGGTKGIGYAVVEELA--------------------AFG-AIVHTCSRNE   47 (120)
Q Consensus         9 ~~~~~~~~litGa~~~ig~~~a~~l~--------------------~~g-~~v~~~~~~~   47 (120)
                      ..+.+|.++|.|+ |..+.-+|+.++                    +.| .+|.+++|..
T Consensus        35 ~~~~gk~VvVIGg-GNvAlD~AR~ll~~~~~l~~tdi~~~~l~~l~r~~~~~V~iv~RRg   93 (216)
T d1lqta1          35 PDLSGARAVVIGN-GNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRG   93 (216)
T ss_dssp             CCCCSSEEEEECC-SHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSC
T ss_pred             ccccCceEEEECC-CchhHhhhhhhccCHhhhccCCCcHHHHHHHhhcCCceEEEEEECC
Confidence            3467899999987 777888888776                    566 4699998853

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=80.54  E-value=0.48  Score=28.45  Aligned_cols=76  Identities=9%  Similarity=0.010  Sum_probs=41.7

Q ss_pred             EEEEecC-CCchHHHHHHHHHHCC----CEEEEeeCChHH--HHHHHH---H-HHhcCCeEEEEeccCCCHHHHHHHHHH
Q 033396           15 TALVTGG-TKGIGYAVVEELAAFG----AIVHTCSRNETE--LNQRIQ---E-WKSKGLQVSGNACDLKIRAQREKLMET   83 (120)
Q Consensus        15 ~~litGa-~~~ig~~~a~~l~~~g----~~v~~~~~~~~~--~~~~~~---~-~~~~~~~~~~~~~D~~~~~~~~~~~~~   83 (120)
                      .+.|.|| +.+.+..++..+....    .++++.|.++..  ++....   . ....+.++..  ...+|..   ..+  
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~--~~~td~~---~al--   75 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEI--HLTLDRR---RAL--   75 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEE--EEESCHH---HHH--
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCcee--eecCCch---hhc--
Confidence            3667776 4455566655555432    489999987743  322221   1 1223333322  2234432   223  


Q ss_pred             HHhhcCCcccEEEecCCCCC
Q 033396           84 VSSQFDGKLNILVSSAQLPY  103 (120)
Q Consensus        84 ~~~~~~g~id~li~~ag~~~  103 (120)
                            ..-|++|+++|+..
T Consensus        76 ------~gaDvVv~ta~~~~   89 (169)
T d1s6ya1          76 ------DGADFVTTQFRVGG   89 (169)
T ss_dssp             ------TTCSEEEECCCTTH
T ss_pred             ------CCCCEEEEccccCC
Confidence                  46799999999876

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=80.53  E-value=3.1  Score=25.63  Aligned_cols=62  Identities=18%  Similarity=0.001  Sum_probs=41.0

Q ss_pred             ccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcC--CeEEEEeccCC
Q 033396           11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG--LQVSGNACDLK   72 (120)
Q Consensus        11 ~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~   72 (120)
                      .+.|++|=+|+..|.......+....+.+|+.++.++...+.....+...|  .++.++.+|..
T Consensus        55 ~kpk~ILEiGt~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd~~  118 (214)
T d2cl5a1          55 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGASQ  118 (214)
T ss_dssp             HCCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH
T ss_pred             hCCCEEEEEccCchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeecccc
Confidence            477899999987776544332222456799999999876665555555433  45777766654

>d1otha2 c.78.1.1 (A:185-354) Ornithine transcarbamoylase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.49  E-value=3.6  Score=24.18  Aligned_cols=37  Identities=27%  Similarity=0.362  Sum_probs=31.4

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      +++|+++.+.|..+.+-.++++.+...|.++.++...
T Consensus         1 sl~gl~I~~vGD~~nV~~Sli~~~~~~g~~~~~~~P~   37 (170)
T d1otha2           1 SLKGLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPK   37 (170)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHTTTGGGTCEEEEECCT
T ss_pred             CCCCCEEEEEcCchhHHHHHHHHHHHcCCEEEEEecc
Confidence            3689999999998888888888888899998888764

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.37  E-value=1.3  Score=26.81  Aligned_cols=30  Identities=30%  Similarity=0.355  Sum_probs=25.4

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      ++|.|+ |-.|...|..+++.|.+|.+++..
T Consensus         6 viIIG~-GpaG~~aA~~aar~G~kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGG-GSGGLASARRAAELGARAAVVESH   35 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            566666 678999999999999999999764

>d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: Nitrogenase iron-molybdenum protein
domain: Nitrogenase iron-molybdenum protein, alpha chain
species: Azotobacter vinelandii [TaxId: 354]

Probab=80.17  E-value=2.6  Score=29.38  Aligned_cols=81  Identities=15%  Similarity=0.068  Sum_probs=48.3

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhcCCeEEEEeccCCCHHHHHHHHHHHHhhcC
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFD   89 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (120)
                      .+.||.+.|.++ +....++++.|.+.|.+|+.+.............+...+.....  .|=.|..++.+.+.+.     
T Consensus       342 ~l~Gkrv~i~~~-~~~~~~l~~~l~elGmevv~~~~~~~~~~d~~~~~~~~~~~~~i--~~d~~~~el~~~i~~~-----  413 (477)
T d1m1na_         342 RLEGKRVMLYIG-GLRPRHVIGAYEDLGMEVVGTGYEFAHNDDYDRTMKEMGDSTLL--YDDVTGYEFEEFVKRI-----  413 (477)
T ss_dssp             HHTTCEEEECBS-SSHHHHTHHHHHTTTCEEEEEEESSCCHHHHHTTTTTSCTTCEE--EESCBHHHHHHHHHHH-----
T ss_pred             hhcCCcEEEecC-chhHHHHHHHHHHCCCEEEEEeecCCChHHHHHHHHhcCCCcEE--ecCCCHHHHHHHHHhc-----
Confidence            368999988776 45778899999999999887755332221111112222322222  2334456667666652     


Q ss_pred             CcccEEEecC
Q 033396           90 GKLNILVSSA   99 (120)
Q Consensus        90 g~id~li~~a   99 (120)
                       ++|+++-+.
T Consensus       414 -~pDL~ig~~  422 (477)
T d1m1na_         414 -KPDLIGSGI  422 (477)
T ss_dssp             -CCSEEEECH
T ss_pred             -CCCEEEECc
Confidence             678887653

>d1vdca2 c.3.1.5 (A:118-243) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=80.13  E-value=1.5  Score=25.00  Aligned_cols=37  Identities=19%  Similarity=0.274  Sum_probs=30.0

Q ss_pred             cccCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCCh
Q 033396           10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE   47 (120)
Q Consensus        10 ~~~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~   47 (120)
                      .+++|.++|.|+ |.-+..-|..|++...+|+++.|.+
T Consensus        31 ~frgk~V~VvGg-GdsA~e~A~~L~~~a~~V~li~r~~   67 (130)
T d1vdca2          31 IFRNKPLAVIGG-GDSAMEEANFLTKYGSKVYIIHRRD   67 (130)
T ss_dssp             GGTTSEEEEECC-SHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred             HhCCCEEEEEcC-chHHHHHHHHHhCCCCcEEEEEecc
Confidence            478999999998 4556677888899889999997754

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=80.12  E-value=4  Score=25.94  Aligned_cols=40  Identities=15%  Similarity=0.081  Sum_probs=30.3

Q ss_pred             cCcEEEEecCCCchHHHHHHHHHHCCCEEEEeeCChHHHHHHH
Q 033396           12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRI   54 (120)
Q Consensus        12 ~~~~~litGa~~~ig~~~a~~l~~~g~~v~~~~~~~~~~~~~~   54 (120)
                      .++.+|=.||+.|.   ++..|+++|++|+.+|.++.-++.+.
T Consensus        56 ~~~~vLD~GcG~G~---~~~~la~~g~~v~gvD~S~~ml~~A~   95 (292)
T d1xvaa_          56 GCHRVLDVACGTGV---DSIMLVEEGFSVTSVDASDKMLKYAL   95 (292)
T ss_dssp             TCCEEEESSCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             CCCEEEEecCCCcH---HHHHHHHcCCeeeeccCchHHHHHHH
Confidence            46789999987775   45566778999999999987655443

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=80.09  E-value=0.95  Score=29.23  Aligned_cols=31  Identities=16%  Similarity=0.207  Sum_probs=24.8

Q ss_pred             EEEecCCCchHHHHHHHHH-----HCCCEEEEeeCCh
Q 033396           16 ALVTGGTKGIGYAVVEELA-----AFGAIVHTCSRNE   47 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~-----~~g~~v~~~~~~~   47 (120)
                      |+|.|| |=.|..+|..|+     +.|.+|.++.+.+
T Consensus        10 V~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~   45 (360)
T d1pn0a1          10 VLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRS   45 (360)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCC
Confidence            677777 677888888886     4789999998754

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=80.03  E-value=1  Score=27.20  Aligned_cols=30  Identities=27%  Similarity=0.372  Sum_probs=24.6

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCEEEEeeCC
Q 033396           16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRN   46 (120)
Q Consensus        16 ~litGa~~~ig~~~a~~l~~~g~~v~~~~~~   46 (120)
                      ++|.|+ |-.|...|..+++.|.+|.++.+.
T Consensus         6 viVIG~-GpaGl~aA~~aar~G~kV~vIEk~   35 (223)
T d1ebda1           6 TLVVGA-GPGGYVAAIRAAQLGQKVTIVEKG   35 (223)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecC
Confidence            566776 556889999999999999999765