Query 033400
Match_columns 120
No_of_seqs 109 out of 1070
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 22:31:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033400.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033400hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kzh_A Probable sugar kinase; 99.6 5.8E-15 2E-19 115.9 7.9 77 41-117 4-84 (328)
2 1rkd_A Ribokinase; carbohydrat 99.5 1.2E-14 4.1E-19 112.6 7.6 76 42-117 3-83 (309)
3 2fv7_A Ribokinase; structural 99.5 1.5E-14 5.3E-19 113.8 8.2 76 42-117 23-103 (331)
4 2hlz_A Ketohexokinase; non-pro 99.5 2.7E-14 9.1E-19 111.6 8.4 77 41-117 15-96 (312)
5 2c4e_A Sugar kinase MJ0406; tr 99.5 2.3E-14 7.7E-19 111.1 7.5 74 44-117 6-84 (302)
6 3ikh_A Carbohydrate kinase; tr 99.5 2.3E-14 7.9E-19 111.3 7.4 74 44-117 3-81 (299)
7 3go6_A Ribokinase RBSK; phosph 99.5 3E-14 1E-18 111.8 7.8 75 43-117 19-98 (310)
8 2nwh_A AGR_C_3442P, carbohydra 99.5 2.8E-14 9.5E-19 111.5 7.4 75 43-117 3-81 (317)
9 3ry7_A Ribokinase; transferase 99.5 3.2E-14 1.1E-18 109.8 7.5 74 44-117 3-82 (304)
10 1vm7_A Ribokinase; TM0960, str 99.5 3.5E-14 1.2E-18 111.0 7.6 74 43-116 14-93 (311)
11 2rbc_A Sugar kinase, AGR_C_456 99.5 7.5E-14 2.6E-18 111.1 7.7 76 42-117 28-108 (343)
12 3bf5_A Ribokinase related prot 99.5 1.2E-13 4.1E-18 108.1 7.6 74 42-117 19-97 (306)
13 3ljs_A Fructokinase; fructokia 99.4 2.1E-13 7.1E-18 107.2 6.9 72 42-117 3-78 (338)
14 3hj6_A Fructokinase, FRK; fruc 99.4 2.8E-13 9.5E-18 106.2 6.7 75 40-117 18-96 (327)
15 3vas_A Putative adenosine kina 99.4 1.5E-13 5E-18 110.4 4.1 76 42-117 23-126 (370)
16 2ajr_A Sugar kinase, PFKB fami 99.4 4.1E-13 1.4E-17 105.6 6.4 73 41-115 10-90 (331)
17 3pl2_A Sugar kinase, ribokinas 99.4 6.2E-13 2.1E-17 103.3 6.2 74 41-117 6-83 (319)
18 3h49_A Ribokinase; transferase 99.4 3.2E-13 1.1E-17 105.8 4.5 76 42-117 4-85 (325)
19 2qcv_A Putative 5-dehydro-2-de 99.4 1.2E-12 4.1E-17 102.2 7.6 74 41-117 9-86 (332)
20 2pkf_A Adenosine kinase; trans 99.4 8.3E-13 2.8E-17 104.1 6.3 75 42-117 9-97 (334)
21 4du5_A PFKB; structural genomi 99.3 1.3E-12 4.3E-17 103.2 7.0 72 41-117 24-100 (336)
22 4gm6_A PFKB family carbohydrat 99.3 2.1E-12 7.1E-17 101.8 7.5 70 43-117 24-98 (351)
23 3ktn_A Carbohydrate kinase, PF 99.3 1.9E-12 6.5E-17 101.8 7.0 69 44-117 3-76 (346)
24 3b1n_A Ribokinase, putative; r 99.3 1.4E-12 4.7E-17 102.8 6.1 72 45-117 2-88 (326)
25 2v78_A Fructokinase; transfera 99.3 2.7E-12 9.3E-17 99.6 7.7 69 44-117 2-75 (313)
26 4e3a_A Sugar kinase protein; s 99.3 1.6E-12 5.4E-17 103.7 6.4 76 42-117 24-122 (352)
27 2abs_A Adenosine kinase, AK; r 99.3 1.9E-12 6.7E-17 103.7 6.8 76 42-117 31-133 (383)
28 1bx4_A Protein (adenosine kina 99.3 1.5E-12 5.3E-17 102.3 6.0 76 42-117 5-109 (345)
29 2dcn_A Hypothetical fructokina 99.3 2.2E-12 7.7E-17 99.8 6.8 69 44-117 2-75 (311)
30 3ewm_A Uncharacterized sugar k 99.3 2.5E-12 8.6E-17 100.0 6.9 69 44-117 2-75 (313)
31 2f02_A Tagatose-6-phosphate ki 99.3 3.2E-12 1.1E-16 100.0 7.5 72 44-117 3-79 (323)
32 1v1a_A 2-keto-3-deoxygluconate 99.3 4.6E-12 1.6E-16 98.2 7.2 69 44-117 2-75 (309)
33 3iq0_A Putative ribokinase II; 99.3 4.1E-12 1.4E-16 99.7 7.0 72 43-117 3-79 (330)
34 3otx_A Adenosine kinase, putat 99.3 1.3E-12 4.5E-17 103.0 4.0 76 42-117 6-111 (347)
35 3cqd_A 6-phosphofructokinase i 99.3 4.1E-12 1.4E-16 98.3 6.6 71 45-117 3-79 (309)
36 3umo_A 6-phosphofructokinase i 99.3 4.5E-12 1.5E-16 98.1 6.7 72 44-117 2-79 (309)
37 4e84_A D-beta-D-heptose 7-phos 99.3 3.3E-12 1.1E-16 102.2 5.9 75 41-117 51-135 (352)
38 1tyy_A Putative sugar kinase; 99.3 6.7E-12 2.3E-16 99.3 6.8 65 43-117 24-92 (339)
39 2jg1_A Tagatose-6-phosphate ki 99.3 8.9E-12 3E-16 98.1 7.5 74 42-117 19-97 (330)
40 4e69_A 2-dehydro-3-deoxyglucon 99.3 6.3E-12 2.1E-16 99.0 6.3 67 42-117 22-94 (328)
41 3ie7_A LIN2199 protein; phosph 99.3 1.5E-11 5E-16 95.8 8.2 72 44-117 3-80 (320)
42 3lhx_A Ketodeoxygluconokinase; 99.2 5.6E-12 1.9E-16 98.3 4.4 63 44-117 5-75 (319)
43 3kd6_A Carbohydrate kinase, PF 99.2 1.3E-11 4.5E-16 96.3 6.2 63 44-117 3-70 (313)
44 3loo_A Anopheles gambiae adeno 99.2 4.1E-12 1.4E-16 101.4 3.0 76 42-117 22-125 (365)
45 2jg5_A Fructose 1-phosphate ki 99.2 5E-11 1.7E-15 91.9 7.6 70 46-117 3-77 (306)
46 2qhp_A Fructokinase; NP_810670 99.2 3.3E-11 1.1E-15 92.5 6.2 58 44-116 4-65 (296)
47 2abq_A Fructose 1-phosphate ki 99.1 8.1E-11 2.8E-15 91.0 7.5 70 46-117 3-77 (306)
48 3uq6_A Adenosine kinase, putat 99.1 3.7E-11 1.3E-15 96.3 4.3 75 43-117 26-128 (372)
49 2afb_A 2-keto-3-deoxygluconate 99.0 1.3E-09 4.5E-14 85.8 8.0 72 41-117 10-86 (351)
50 1vk4_A PFKB carbohydrate kinas 98.6 2.5E-08 8.6E-13 77.1 4.1 62 44-117 12-76 (298)
51 3rp8_A Flavoprotein monooxygen 59.9 7.5 0.00026 30.0 3.5 20 82-101 35-54 (407)
52 1qo8_A Flavocytochrome C3 fuma 56.4 6.6 0.00023 32.4 2.8 25 78-102 129-153 (566)
53 2re2_A Uncharacterized protein 55.5 5.1 0.00017 27.6 1.6 39 79-119 65-103 (136)
54 3o0h_A Glutathione reductase; 53.7 13 0.00043 29.9 4.0 21 81-101 37-57 (484)
55 3r9u_A Thioredoxin reductase; 53.5 18 0.0006 26.2 4.4 23 79-101 13-36 (315)
56 3fwy_A Light-independent proto 49.5 12 0.00043 29.0 3.2 20 82-101 65-84 (314)
57 1ua4_A Glucokinase, ADP-depend 40.8 9.3 0.00032 31.9 1.3 29 77-105 109-139 (455)
58 2a87_A TRXR, TR, thioredoxin r 40.5 24 0.00082 26.3 3.5 20 81-100 25-44 (335)
59 1y0p_A Fumarate reductase flav 40.2 24 0.00083 29.0 3.7 24 78-101 134-157 (571)
60 2i0z_A NAD(FAD)-utilizing dehy 39.2 30 0.001 27.4 4.0 24 78-101 34-57 (447)
61 3vh1_A Ubiquitin-like modifier 37.9 37 0.0013 29.4 4.6 58 4-105 303-360 (598)
62 2gk4_A Conserved hypothetical 34.1 22 0.00077 26.9 2.4 28 76-103 26-53 (232)
63 1vl8_A Gluconate 5-dehydrogena 33.0 49 0.0017 24.1 4.1 24 78-101 30-53 (267)
64 1rdu_A Conserved hypothetical 32.3 11 0.00038 24.6 0.3 40 79-119 48-87 (116)
65 3drw_A ADP-specific phosphofru 32.1 22 0.00077 29.9 2.3 31 75-105 113-144 (474)
66 1gc5_A ADP-dependent glucokina 31.5 21 0.00072 29.9 2.0 28 77-104 117-146 (467)
67 1wcv_1 SOJ, segregation protei 31.0 36 0.0012 24.6 3.0 26 76-101 13-43 (257)
68 4gut_A Lysine-specific histone 30.7 68 0.0023 28.1 5.2 21 80-100 346-366 (776)
69 2wfb_A Putative uncharacterize 30.5 14 0.00048 24.3 0.6 41 78-119 52-92 (120)
70 3gvc_A Oxidoreductase, probabl 29.9 51 0.0018 24.3 3.8 24 78-101 38-61 (277)
71 1eo1_A Hypothetical protein MT 28.5 14 0.00047 24.5 0.3 39 80-119 52-90 (124)
72 3kkj_A Amine oxidase, flavin-c 28.0 43 0.0015 22.0 2.8 21 81-101 13-33 (336)
73 2yx6_A Hypothetical protein PH 27.2 16 0.00055 24.0 0.4 35 84-119 54-88 (121)
74 3zq6_A Putative arsenical pump 26.6 44 0.0015 25.5 2.9 28 74-101 18-50 (324)
75 1u7z_A Coenzyme A biosynthesis 25.5 39 0.0013 25.3 2.4 26 76-101 31-56 (226)
76 1l2l_A ADP-dependent glucokina 25.5 23 0.00079 29.6 1.2 28 77-104 112-141 (457)
77 3kjh_A CO dehydrogenase/acetyl 24.6 37 0.0013 23.7 2.0 24 78-101 8-36 (254)
78 2woo_A ATPase GET3; tail-ancho 24.6 45 0.0015 25.6 2.6 21 81-101 35-55 (329)
79 2woj_A ATPase GET3; tail-ancho 24.4 42 0.0014 26.2 2.5 28 74-101 22-56 (354)
80 3ug7_A Arsenical pump-driving 23.9 52 0.0018 25.5 2.9 20 82-101 43-62 (349)
81 3k31_A Enoyl-(acyl-carrier-pro 23.7 1.2E+02 0.0042 22.3 4.9 22 80-101 43-64 (296)
82 2wdq_A Succinate dehydrogenase 23.3 43 0.0015 28.0 2.4 27 76-102 13-39 (588)
83 3end_A Light-independent proto 23.3 53 0.0018 24.3 2.8 25 77-101 48-77 (307)
84 2yru_A Steroid receptor RNA ac 23.2 46 0.0016 22.7 2.2 18 5-22 40-57 (118)
85 2h88_A Succinate dehydrogenase 23.2 43 0.0015 28.5 2.4 28 75-102 23-50 (621)
86 3ruf_A WBGU; rossmann fold, UD 23.1 63 0.0022 23.9 3.2 25 78-102 34-58 (351)
87 3nlc_A Uncharacterized protein 23.0 1E+02 0.0036 25.7 4.8 28 74-101 110-138 (549)
88 2afh_E Nitrogenase iron protei 22.4 57 0.002 23.9 2.8 21 81-101 18-38 (289)
89 1cp2_A CP2, nitrogenase iron p 21.8 55 0.0019 23.5 2.5 20 82-101 18-37 (269)
90 3q9l_A Septum site-determining 21.7 62 0.0021 22.9 2.8 20 82-101 20-39 (260)
91 2ph1_A Nucleotide-binding prot 21.4 62 0.0021 23.4 2.8 26 75-100 24-54 (262)
92 4dzz_A Plasmid partitioning pr 21.1 67 0.0023 21.7 2.8 20 82-101 19-38 (206)
93 1jw9_B Molybdopterin biosynthe 20.8 49 0.0017 24.4 2.1 19 76-94 37-55 (249)
94 3grk_A Enoyl-(acyl-carrier-pro 20.8 1.4E+02 0.0047 22.1 4.7 22 80-101 44-65 (293)
95 3bfv_A CAPA1, CAPB2, membrane 20.7 65 0.0022 24.0 2.8 21 81-101 99-119 (271)
96 4a5l_A Thioredoxin reductase; 20.5 1.2E+02 0.0041 21.8 4.2 26 76-101 9-35 (314)
97 2qa2_A CABE, polyketide oxygen 20.2 83 0.0028 25.4 3.5 21 81-101 23-43 (499)
98 1g3q_A MIND ATPase, cell divis 20.1 70 0.0024 22.3 2.8 20 82-101 20-39 (237)
99 1byi_A Dethiobiotin synthase; 20.0 72 0.0025 22.1 2.8 23 81-103 18-40 (224)
No 1
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=99.56 E-value=5.8e-15 Score=115.88 Aligned_cols=77 Identities=25% Similarity=0.371 Sum_probs=69.7
Q ss_pred CCCCcEEEEccccceeeeecCCCCCCCCceeceeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhcc----cHHhcCc
Q 033400 41 QEAAEPMIIGGMVLDIHATPSIPANPRTTTLGKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 116 (120)
Q Consensus 41 ~~~~~VlvvGs~~iDii~~v~~~p~~g~~~~~~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~----~~~~~~~ 116 (120)
+++++|+|+|++++|++.+++.+|.++++....+...+||+++|+|++++|||.++.++|.||+|.+|+ .|++.||
T Consensus 4 ~~~~~v~viG~~~vD~~~~~~~~~~~g~~~~~~~~~~~GG~~~NvA~~la~LG~~v~~i~~vG~D~~g~~i~~~L~~~gv 83 (328)
T 3kzh_A 4 RKEPYLLVFGASVVDVFGFSKASYRPYNSTPGHVKISFGGVCRNIAENMARVGVNTNFMSILGNDEHGKSIVEHSKKIGY 83 (328)
T ss_dssp CCCCCEEEECCCEEEEEEEESSCCCTTSEEEEEEEEEEECHHHHHHHHHHHTTCCEEEECEECSSHHHHHHHHHHHHHTE
T ss_pred CCCCcEEEECcEEeeeeeccCCCCCCCCCceEEEEEccCcHHHHHHHHHHHcCCCcEEEEEecCcHHHHHHHHHHHHcCC
Confidence 457899999999999999999988888887778999999999999999999999999999999999997 4556676
Q ss_pred c
Q 033400 117 L 117 (120)
Q Consensus 117 ~ 117 (120)
+
T Consensus 84 ~ 84 (328)
T 3kzh_A 84 H 84 (328)
T ss_dssp E
T ss_pred C
Confidence 5
No 2
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=99.54 E-value=1.2e-14 Score=112.60 Aligned_cols=76 Identities=22% Similarity=0.215 Sum_probs=66.2
Q ss_pred CCCcEEEEccccceeeeecCCCCCCCCceec-eeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhccc----HHhcCc
Q 033400 42 EAAEPMIIGGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIYC----WNTGNL 116 (120)
Q Consensus 42 ~~~~VlvvGs~~iDii~~v~~~p~~g~~~~~-~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~~----~~~~~~ 116 (120)
+.++|+|+|++++|++..++++|.+++.... .+...+||+++|+|++++|||.++.++|+||+|.+|+. |++.||
T Consensus 3 ~~~~v~viG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~N~A~~la~lG~~~~~~~~vG~D~~g~~i~~~L~~~gv 82 (309)
T 1rkd_A 3 NAGSLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNI 82 (309)
T ss_dssp -CCEEEEECCCEEEEEEECSSCCCTTCCCCCCCEEEEEECHHHHHHHHHHHHTCEEEEEEEEESSTTHHHHHHHHHTTTE
T ss_pred CCCeEEEECcceEeEEEecCCCCCCCCeeecCceeecCCCHHHHHHHHHHhCCCceEEEEEECCCHHHHHHHHHHHHcCC
Confidence 3568999999999999999998888776654 78899999999999999999999999999999999984 445666
Q ss_pred c
Q 033400 117 L 117 (120)
Q Consensus 117 ~ 117 (120)
+
T Consensus 83 ~ 83 (309)
T 1rkd_A 83 D 83 (309)
T ss_dssp E
T ss_pred C
Confidence 4
No 3
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=99.53 E-value=1.5e-14 Score=113.78 Aligned_cols=76 Identities=22% Similarity=0.238 Sum_probs=66.4
Q ss_pred CCCcEEEEccccceeeeecCCCCCCCCceec-eeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhccc----HHhcCc
Q 033400 42 EAAEPMIIGGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIYC----WNTGNL 116 (120)
Q Consensus 42 ~~~~VlvvGs~~iDii~~v~~~p~~g~~~~~-~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~~----~~~~~~ 116 (120)
++++|+|+|++++|+++.++++|.+++.... .+...+||+++|+|++++|||.++.++|+||+|.+|+. |++.||
T Consensus 23 ~~~~vlviG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~~Gv 102 (331)
T 2fv7_A 23 EVAAVVVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDI 102 (331)
T ss_dssp -CCSEEEECCCEEEEEEECSSCCCTTCCCCCSEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHTTTE
T ss_pred ccCCEEEECcccEEEEEecCCCCCCCceEecCceEECcCCHHHHHHHHHHHCCCCeEEEEEECCChhHHHHHHHHHHcCC
Confidence 3568999999999999999998888777654 78899999999999999999999999999999999984 445666
Q ss_pred c
Q 033400 117 L 117 (120)
Q Consensus 117 ~ 117 (120)
+
T Consensus 103 ~ 103 (331)
T 2fv7_A 103 S 103 (331)
T ss_dssp E
T ss_pred c
Confidence 4
No 4
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=99.52 E-value=2.7e-14 Score=111.58 Aligned_cols=77 Identities=16% Similarity=0.129 Sum_probs=65.9
Q ss_pred CCCCcEEEEccccceeeeecCCCCCCCCceec-eeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhcc----cHHhcC
Q 033400 41 QEAAEPMIIGGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGN 115 (120)
Q Consensus 41 ~~~~~VlvvGs~~iDii~~v~~~p~~g~~~~~-~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~----~~~~~~ 115 (120)
.++++|+|+|++++|+++.++++|..++.... +....+||+++|+|++++|||.++.++|+||+|.+|+ .|++.|
T Consensus 15 ~~~~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~~ig~vG~D~~G~~l~~~L~~~G 94 (312)
T 2hlz_A 15 PRGSQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTILSLLGAPCAFMGSMAPGHVADFVLDDLRRYS 94 (312)
T ss_dssp --CCEEEEESCCEEEEEEEESSCCCTTCEEECSEEEEEEESHHHHHHHHHHHHTCCEEEEEEECSSHHHHHHHHHHHHTT
T ss_pred CCCCcEEEECcceEEEeeccccCCCccceeecccceeccCccHHHHHHHHHHcCCceEEEEEecCchHHHHHHHHHHHcC
Confidence 45678999999999999999988877766543 7788999999999999999999999999999999998 455567
Q ss_pred cc
Q 033400 116 LL 117 (120)
Q Consensus 116 ~~ 117 (120)
|+
T Consensus 95 V~ 96 (312)
T 2hlz_A 95 VD 96 (312)
T ss_dssp CB
T ss_pred CC
Confidence 65
No 5
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=99.51 E-value=2.3e-14 Score=111.13 Aligned_cols=74 Identities=23% Similarity=0.258 Sum_probs=65.7
Q ss_pred CcEEEEccccceeeeecCCCCCCCCceec-eeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhcc----cHHhcCcc
Q 033400 44 AEPMIIGGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNLL 117 (120)
Q Consensus 44 ~~VlvvGs~~iDii~~v~~~p~~g~~~~~-~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~----~~~~~~~~ 117 (120)
++|+|+|++++|+++.+++.|.+++.... .+...+||+++|+|++++|||.++.++|+||+|.+|+ .|++.||+
T Consensus 6 ~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~ 84 (302)
T 2c4e_A 6 EKITCVGHTALDYIFNVEKFPEPNTSIQIPSARKYYGGAAANTAVGIKKLGVNSELLSCVGYDFKNSGYERYLKNLDIN 84 (302)
T ss_dssp EEEEEESCCEEEEEEECSSCCCTTCCCCCSCEEEEEECHHHHHHHHHHHTTCEEEEECEECTTTTTSHHHHHHHHTTCB
T ss_pred CcEEEECceeEEEEecccccCCCCceeeecceeecCCCHHHHHHHHHHHCCCceEEEEEEeCCCchHHHHHHHHHcCCc
Confidence 47999999999999999988888776554 7889999999999999999999999999999999997 45557775
No 6
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=99.51 E-value=2.3e-14 Score=111.34 Aligned_cols=74 Identities=20% Similarity=0.216 Sum_probs=66.6
Q ss_pred CcEEEEccccceeeeecCCCCCCCCceec-eeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhccc----HHhcCcc
Q 033400 44 AEPMIIGGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIYC----WNTGNLL 117 (120)
Q Consensus 44 ~~VlvvGs~~iDii~~v~~~p~~g~~~~~-~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~~----~~~~~~~ 117 (120)
++|+|+|++++|++++++++|.++++... .+...+||+++|+|++++|||.++.++|.||+|.+|+. |++.||+
T Consensus 3 ~~i~viG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~i~~vG~D~~g~~i~~~l~~~gv~ 81 (299)
T 3ikh_A 3 LRVYVTGNITVDETWSIPDIPKKGASIHGVKVSQDIGGKGANQAIILSRCGIETRLIAATGNDSNGAWIRQQIKNEPLM 81 (299)
T ss_dssp CCEEEECCCEEEEEEECSSCCCTTCEEECEEEEEEEECHHHHHHHHHHHTTCCEEEECCCCSSHHHHHHHHHGGGSSCE
T ss_pred ceEEEECceEEEEEEecCCCCCCCCeEEeeeeeeccCCHHHHHHHHHHHCCCCeEEEEEECCCHHHHHHHHHHHHcCCc
Confidence 68999999999999999999988887765 78999999999999999999999999999999999984 4556664
No 7
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=99.51 E-value=3e-14 Score=111.80 Aligned_cols=75 Identities=20% Similarity=0.234 Sum_probs=67.3
Q ss_pred CCcEEEEccccceeeeecCCCCCCCCceec-eeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhcc----cHHhcCcc
Q 033400 43 AAEPMIIGGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNLL 117 (120)
Q Consensus 43 ~~~VlvvGs~~iDii~~v~~~p~~g~~~~~-~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~----~~~~~~~~ 117 (120)
.++|+|+|++++|++++++++|.++++... .+...+||+++|+|++++|||.++.++|.||+|.+|+ .|++.||+
T Consensus 19 m~~i~viG~~~iD~~~~v~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~L~~~gV~ 98 (310)
T 3go6_A 19 APRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLRAHLRANAVG 98 (310)
T ss_dssp CCEEEEECCCEEEEEEECSSCCCTTCCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEECSSHHHHHHHHHHHHTTCB
T ss_pred cCCEEEECCceEEEEEecCCCCCCCCeEEecceeecCCCHHHHHHHHHHHCCCCeEEEEEECCCHHHHHHHHHHHHcCCc
Confidence 567999999999999999998888877665 8999999999999999999999999999999999998 45566765
No 8
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=99.50 E-value=2.8e-14 Score=111.50 Aligned_cols=75 Identities=20% Similarity=0.228 Sum_probs=66.7
Q ss_pred CCcEEEEccccceeeeecCCCCCCCCceeceeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhcc----cHHhcCcc
Q 033400 43 AAEPMIIGGMVLDIHATPSIPANPRTTTLGKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNLL 117 (120)
Q Consensus 43 ~~~VlvvGs~~iDii~~v~~~p~~g~~~~~~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~----~~~~~~~~ 117 (120)
.++|+|+|++++|++..++..|.++++....+...+||+++|+|++++|||.++.++|+||+|.+|+ .|++.||+
T Consensus 3 m~~i~viG~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~~gV~ 81 (317)
T 2nwh_A 3 MKKILVLGGAHIDRRGMIETETAPGASNPGSWMEEAGGGGFNAARNLSRLGFEVRIIAPRGGDVTGEVVAEAARQAGVE 81 (317)
T ss_dssp CCEEEEESCCEEEEEEEESSSCCTTSCCCEEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHTTCE
T ss_pred CCeEEEECchheEEeeccCCCCCCCCCceEeEEEeCCcHHHHHHHHHHhcCCCcEEEEeecCCchHHHHHHHHHHcCCC
Confidence 3589999999999999999888888777767889999999999999999999999999999999998 44567765
No 9
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=99.50 E-value=3.2e-14 Score=109.77 Aligned_cols=74 Identities=20% Similarity=0.218 Sum_probs=66.3
Q ss_pred CcEEEEccccceeeeecCCCCCCCCce-ec-eeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhcc----cHHhcCcc
Q 033400 44 AEPMIIGGMVLDIHATPSIPANPRTTT-LG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNLL 117 (120)
Q Consensus 44 ~~VlvvGs~~iDii~~v~~~p~~g~~~-~~-~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~----~~~~~~~~ 117 (120)
++|+|+|++++|++++++++|.++++. .. .+...+||+++|+|++++|||.++.++|.||+|.+|+ .+++.||+
T Consensus 3 ~~v~viG~~~~D~~~~~~~~p~~g~~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~~~~vG~D~~g~~i~~~l~~~gv~ 82 (304)
T 3ry7_A 3 NKVVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIGTDGVADFILEDFKVAHID 82 (304)
T ss_dssp CEEEEECCCEEEEEEECSSCCCTTCCCCCSSCCEEEEECHHHHHHHHHHHTTCEEEEECEEESSCTTHHHHHHHHHTTCB
T ss_pred CcEEEEccceeEEEEeccCCCCCCCceecccceeecCCCHHHHHHHHHHHCCCCeEEEEEeCCChHHHHHHHHHHHcCCc
Confidence 579999999999999999998888776 54 7899999999999999999999999999999999997 45566765
No 10
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.50 E-value=3.5e-14 Score=111.05 Aligned_cols=74 Identities=20% Similarity=0.198 Sum_probs=65.6
Q ss_pred CCcEEEEccccceeeeecCCCCCCCCceec-eeeEecCChHHHHHHHHHHcCCC-cEEEEeecCChhcccH----HhcCc
Q 033400 43 AAEPMIIGGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAK-PYMISALGLDMEIYCW----NTGNL 116 (120)
Q Consensus 43 ~~~VlvvGs~~iDii~~v~~~p~~g~~~~~-~~~~~~GG~aaNvAvalaRLG~~-v~lvs~VGdD~~G~~~----~~~~~ 116 (120)
..+|+|+|++++|++++++++|.+++.... ++...+||+++|+|++++|||.+ +.++|++|+|.+|+.+ ++.||
T Consensus 14 ~~~v~vvG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~i~~vG~D~~G~~l~~~L~~~gV 93 (311)
T 1vm7_A 14 FLVISVVGSSNIDIVLKVDHFTKPGETQKAIEMNVFPGGKGANQAVTVAKIGEKGCRFVTCIGNDDYSDLLIENYEKLGI 93 (311)
T ss_dssp CCCEEEECCCEEEEEEECSSCCCTTCEEECSEEEEEEECHHHHHHHHHHHHHSSCEEEEEEECSSHHHHHHHHHHHHTTE
T ss_pred cCCEEEECcceeeEEEecccCCCCCceEecCeeeecCCCHHHHHHHHHHHcCCCceEEEEEECCChHHHHHHHHHHHCCC
Confidence 568999999999999999998888777654 88999999999999999999999 9999999999999844 44565
No 11
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=99.47 E-value=7.5e-14 Score=111.06 Aligned_cols=76 Identities=16% Similarity=0.153 Sum_probs=66.0
Q ss_pred CCCcEEEEccccceeeeecCCCCCCCCcee-ceeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhccc----HHhcCc
Q 033400 42 EAAEPMIIGGMVLDIHATPSIPANPRTTTL-GKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIYC----WNTGNL 116 (120)
Q Consensus 42 ~~~~VlvvGs~~iDii~~v~~~p~~g~~~~-~~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~~----~~~~~~ 116 (120)
++++|+|+|++++|++++++++|..++... ..+...+||+++|+|++++|||.++.++++||+|.+|+. |++.||
T Consensus 28 ~~~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~i~~~L~~~GV 107 (343)
T 2rbc_A 28 GGKHVLCVGAAVLDTLFRVADMPKGEGKVLPYEVLQIAEGMASSAAYAVHRMGGRASLWGAVGDDETGTRILRDLSESGI 107 (343)
T ss_dssp CCCEEEEESCCEEEEEEECSSCCCSSSCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHTTE
T ss_pred cCCeEEEECcceEEEEeecCCCCCCCCeEeeeeeEEcCCcHHHHHHHHHHHcCCceEEEEEeCCCHHHHHHHHHHHHcCC
Confidence 456899999999999999998877766544 488899999999999999999999999999999999984 455676
Q ss_pred c
Q 033400 117 L 117 (120)
Q Consensus 117 ~ 117 (120)
+
T Consensus 108 d 108 (343)
T 2rbc_A 108 D 108 (343)
T ss_dssp E
T ss_pred c
Confidence 5
No 12
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=99.45 E-value=1.2e-13 Score=108.13 Aligned_cols=74 Identities=15% Similarity=0.073 Sum_probs=65.0
Q ss_pred CCCcEEEEccccceeeeecCCCCCCCCceec-eeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhcc----cHHhcCc
Q 033400 42 EAAEPMIIGGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 116 (120)
Q Consensus 42 ~~~~VlvvGs~~iDii~~v~~~p~~g~~~~~-~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~----~~~~~~~ 116 (120)
++++|+|+|++++|++..+++.| +++.... .+...+||+++|+|++++|||.++.++|+||+| +|+ .|++.||
T Consensus 19 ~~~~v~viG~~~iD~~~~~~~~p-~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D-~G~~i~~~L~~~gV 96 (306)
T 3bf5_A 19 GMRFLAYFGHLNIDVLISVDSIP-REGSVNVKDLRPRFGGTAGNFAIVAQKFRIPFDLYSAVGMK-THREYLAMIESMGI 96 (306)
T ss_dssp CCEEEEEECCCEEEEEEECSCCC-SSEEEECSEEEEEEEHHHHHHHHHHHHTTCCCEEEEEEETT-TCHHHHHHHHHTTC
T ss_pred CCCcEEEECCceEEEEEecCCCC-CCceEECcceEecCCChHHHHHHHHHHcCCCeEEEEEEeCC-hHHHHHHHHHHcCC
Confidence 46789999999999999999888 7766654 788999999999999999999999999999999 998 4455676
Q ss_pred c
Q 033400 117 L 117 (120)
Q Consensus 117 ~ 117 (120)
+
T Consensus 97 ~ 97 (306)
T 3bf5_A 97 N 97 (306)
T ss_dssp C
T ss_pred C
Confidence 5
No 13
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=99.42 E-value=2.1e-13 Score=107.20 Aligned_cols=72 Identities=21% Similarity=0.278 Sum_probs=61.6
Q ss_pred CCCcEEEEccccceeeeecCCCCCCCCceeceeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhcc----cHHhcCcc
Q 033400 42 EAAEPMIIGGMVLDIHATPSIPANPRTTTLGKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNLL 117 (120)
Q Consensus 42 ~~~~VlvvGs~~iDii~~v~~~p~~g~~~~~~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~----~~~~~~~~ 117 (120)
++++|+|+|++++|++...+..|.. ...+...+||+++|+|++++|||.++.++|.||+|.+|+ .|++.||+
T Consensus 3 ~~~~v~viG~~~iD~~~~~~~~~~~----~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~l~~~l~~~gV~ 78 (338)
T 3ljs_A 3 LKKTILCFGEALIDMLAQPLVKKGM----PRAFLQCAGGAPANVAVAVARLGGAVQFVGMLGSDMFGDFLFDSFAEAGVV 78 (338)
T ss_dssp -CCEEEEESCCEEEEEECCCSSTTS----CCCEEEEEECHHHHHHHHHHHHTCCEEEESEEESSHHHHHHHHHHHHHTCB
T ss_pred CCCCEEEEChhhhheeccCCCCccc----hhceeecCCChHHHHHHHHHhCCCCEEEEeeccCCHHHHHHHHHHHHcCCC
Confidence 3578999999999999988875432 457889999999999999999999999999999999998 45556765
No 14
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=99.41 E-value=2.8e-13 Score=106.23 Aligned_cols=75 Identities=21% Similarity=0.310 Sum_probs=61.2
Q ss_pred CCCCCcEEEEccccceeeeecCCCCCCCCceeceeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhcc----cHHhcC
Q 033400 40 KQEAAEPMIIGGMVLDIHATPSIPANPRTTTLGKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGN 115 (120)
Q Consensus 40 ~~~~~~VlvvGs~~iDii~~v~~~p~~g~~~~~~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~----~~~~~~ 115 (120)
..++++|+|+|++++|++...+..|.. ....+...+||+++|+|++++|||.++.++|.||+|.+|+ .|++.|
T Consensus 18 ~~~~~~v~viG~~~~D~~~~~~~~p~~---~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~i~~~l~~~g 94 (327)
T 3hj6_A 18 SKGDLDVVSLGEILVDMISTEEVNSLS---QSREYTRHFGGSPANIAVNLSRLGKKVALISRLGADAFGNYLLDVLKGEQ 94 (327)
T ss_dssp ----CCEEEESCCEEEEECCCCCSSGG---GCCEEEEEEECHHHHHHHHHHHTTCCEEEECEEESSHHHHHHHHHHHHTT
T ss_pred ccCCCCEEEEccceEEEeccCCCCCcc---ccceeeeecCcHHHHHHHHHHHcCCcEEEEEEeCCCHHHHHHHHHHHHcC
Confidence 356789999999999999887765542 3457888999999999999999999999999999999997 455567
Q ss_pred cc
Q 033400 116 LL 117 (120)
Q Consensus 116 ~~ 117 (120)
|+
T Consensus 95 v~ 96 (327)
T 3hj6_A 95 II 96 (327)
T ss_dssp CB
T ss_pred CC
Confidence 65
No 15
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=99.39 E-value=1.5e-13 Score=110.39 Aligned_cols=76 Identities=17% Similarity=0.159 Sum_probs=64.2
Q ss_pred CCCcEEEEccccceeeeecCC--------------------CCCCCCcee-ceeeEecCChHHHHHHHHHHc---CCCcE
Q 033400 42 EAAEPMIIGGMVLDIHATPSI--------------------PANPRTTTL-GKANYVLGGVARNVAECMSKL---GAKPY 97 (120)
Q Consensus 42 ~~~~VlvvGs~~iDii~~v~~--------------------~p~~g~~~~-~~~~~~~GG~aaNvAvalaRL---G~~v~ 97 (120)
.+.+|+|+|++++|+++.++. .|.+++... ..+...+||+++|+|++++|| |.++.
T Consensus 23 ~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~P~~ge~~~~~~~~~~~GG~~~N~A~~la~L~~~G~~~~ 102 (370)
T 3vas_A 23 SEGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCS 102 (370)
T ss_dssp CTTCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTHHHHHHTTSSSCEEEEECHHHHHHHHHHHHHCCTTCEE
T ss_pred CCccEEEECCcceeEEEecCHHHHHHcCCCCCceEEccHHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhcCCCCcEE
Confidence 367899999999999999994 454544433 478899999999999999999 99999
Q ss_pred EEEeecCChhcc----cHHhcCcc
Q 033400 98 MISALGLDMEIY----CWNTGNLL 117 (120)
Q Consensus 98 lvs~VGdD~~G~----~~~~~~~~ 117 (120)
|+|+||+|.+|+ .|++.||+
T Consensus 103 ~ig~vG~D~~G~~~~~~L~~~GV~ 126 (370)
T 3vas_A 103 YVGCIGADIQGKYIKNDCSALDLV 126 (370)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCE
T ss_pred EEEEEcCChhHHHHHHHHHHcCCc
Confidence 999999999998 45567765
No 16
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.39 E-value=4.1e-13 Score=105.58 Aligned_cols=73 Identities=16% Similarity=-0.000 Sum_probs=62.5
Q ss_pred CCCCcEEEEccccceeeeecCCCCCCCCcee----ceeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhcccH----H
Q 033400 41 QEAAEPMIIGGMVLDIHATPSIPANPRTTTL----GKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIYCW----N 112 (120)
Q Consensus 41 ~~~~~VlvvGs~~iDii~~v~~~p~~g~~~~----~~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~~~----~ 112 (120)
...+.++|+|++++|+++++++ |.+|+++. .++...+||+++|+|++++|||.++.++|.||+| +|+.+ +
T Consensus 10 ~~~~~~~v~G~~~vD~~~~~~~-~~~g~~~~~s~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~d-~G~~i~~~L~ 87 (331)
T 2ajr_A 10 HHHMVLTVTLNPALDREIFIED-FQVNRLYRINDLSKTQMSPGGKGINVSIALSKLGVPSVATGFVGGY-MGKILVEELR 87 (331)
T ss_dssp --CCEEEEESSCEEEEEEECTT-CCSSCEEECCSGGGEEEEEESHHHHHHHHHHHTTCCEEEEEEEEHH-HHHHHHHHHH
T ss_pred ccceEEEEecchHHeEEEEcCC-ccCCceEEeccccceEEecCcHHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHH
Confidence 3477899999999999999998 66776654 5889999999999999999999999999999998 89844 4
Q ss_pred hcC
Q 033400 113 TGN 115 (120)
Q Consensus 113 ~~~ 115 (120)
+.|
T Consensus 88 ~~g 90 (331)
T 2ajr_A 88 KIS 90 (331)
T ss_dssp HHC
T ss_pred HcC
Confidence 566
No 17
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=99.37 E-value=6.2e-13 Score=103.33 Aligned_cols=74 Identities=22% Similarity=0.160 Sum_probs=60.4
Q ss_pred CCCCcEEEEccccceeeeecCCCCCCCCceeceeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhcc----cHHhcCc
Q 033400 41 QEAAEPMIIGGMVLDIHATPSIPANPRTTTLGKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 116 (120)
Q Consensus 41 ~~~~~VlvvGs~~iDii~~v~~~p~~g~~~~~~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~----~~~~~~~ 116 (120)
.++++|+|+|++++|++...+..|.. ...++...+||+++|+|++++|||.++.++|.||+|.+|+ .|++.||
T Consensus 6 ~~~~~v~~iG~~~~D~~~~~~~~p~~---~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv 82 (319)
T 3pl2_A 6 TSTHEVLAIGRLGVDIYPLQSGVGLA---DVQSFGKYLGGSAANVSVAAARHGHNSALLSRVGNDPFGEYLLAELERLGV 82 (319)
T ss_dssp -CCCSEEEESCCEEEECBSSSSCCGG---GCCCBCCEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHTTE
T ss_pred ccCCCEEEEChhheeeecccCCCCcc---ccceeeecCCCcHHHHHHHHHHCCCceEEEEEeCCCHHHHHHHHHHHHcCC
Confidence 34679999999999998876554432 2346778899999999999999999999999999999998 4455666
Q ss_pred c
Q 033400 117 L 117 (120)
Q Consensus 117 ~ 117 (120)
+
T Consensus 83 ~ 83 (319)
T 3pl2_A 83 D 83 (319)
T ss_dssp E
T ss_pred c
Confidence 4
No 18
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=99.36 E-value=3.2e-13 Score=105.79 Aligned_cols=76 Identities=22% Similarity=0.276 Sum_probs=60.3
Q ss_pred CCCcEEEEccccceeeeecCCC-CCCCCcee-ceeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhcc----cHHhcC
Q 033400 42 EAAEPMIIGGMVLDIHATPSIP-ANPRTTTL-GKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGN 115 (120)
Q Consensus 42 ~~~~VlvvGs~~iDii~~v~~~-p~~g~~~~-~~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~----~~~~~~ 115 (120)
++++|+|+|++++|++...... +...++++ .++...+||+++|+|++++|||.++.++|+||+|.+|+ .|++.|
T Consensus 4 ~~~~v~~iG~~~~D~~~~~~~~~~~~~~~~p~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~~L~~~g 83 (325)
T 3h49_A 4 DNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSRIGKDAAGQFILDHCRKEN 83 (325)
T ss_dssp -CEEEEEESCCEEEEEECSCCGGGGGSSCCCCSCCCCEEESHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHHT
T ss_pred CCCeEEEEChhhheeeccCCCCccccccccchheeEEccCcHHHHHHHHHHHCCCCeEEEEEECCChHHHHHHHHHHHcC
Confidence 4679999999999998765432 22233444 36788999999999999999999999999999999998 455566
Q ss_pred cc
Q 033400 116 LL 117 (120)
Q Consensus 116 ~~ 117 (120)
|+
T Consensus 84 V~ 85 (325)
T 3h49_A 84 ID 85 (325)
T ss_dssp CB
T ss_pred Cc
Confidence 65
No 19
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=99.36 E-value=1.2e-12 Score=102.23 Aligned_cols=74 Identities=19% Similarity=0.139 Sum_probs=60.9
Q ss_pred CCCCcEEEEccccceeeeecCCCCCCCCceeceeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhccc----HHhcCc
Q 033400 41 QEAAEPMIIGGMVLDIHATPSIPANPRTTTLGKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIYC----WNTGNL 116 (120)
Q Consensus 41 ~~~~~VlvvGs~~iDii~~v~~~p~~g~~~~~~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~~----~~~~~~ 116 (120)
+++++|+|+|++++|++......|. .....+...+||+++|+|++++|||.++.++|+||+|.+|+. |++.||
T Consensus 9 ~~~~~i~viG~~~~D~~~~~~~~~~---~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~~gV 85 (332)
T 2qcv_A 9 DREFDLIAIGRACIDLNAVEYNRPM---EETMTFSKYVGGSPANIVIGSSKLGLKAGFIGKIADDQHGRFIESYMRGVGV 85 (332)
T ss_dssp CCSEEEEEESCCEEEEEESSCSSCG---GGCCCEEEEEESHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHHTTC
T ss_pred ccCCcEEEECcceEEEecCCCCCCc---cccceeEecCCCHHHHHHHHHHHcCCceEEEEEeCCCHHHHHHHHHHHHcCC
Confidence 4567899999999999987654332 123478889999999999999999999999999999999984 455676
Q ss_pred c
Q 033400 117 L 117 (120)
Q Consensus 117 ~ 117 (120)
+
T Consensus 86 ~ 86 (332)
T 2qcv_A 86 D 86 (332)
T ss_dssp B
T ss_pred C
Confidence 5
No 20
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=99.35 E-value=8.3e-13 Score=104.14 Aligned_cols=75 Identities=19% Similarity=0.137 Sum_probs=63.1
Q ss_pred CCCcEEEEccccceeeeec----------CCCCCCCCcee-ceeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhcc-
Q 033400 42 EAAEPMIIGGMVLDIHATP----------SIPANPRTTTL-GKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY- 109 (120)
Q Consensus 42 ~~~~VlvvGs~~iDii~~v----------~~~p~~g~~~~-~~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~- 109 (120)
+.++|+|+|++++|+++.+ ++.|+.+++.. ..+...+||+++|+|++++|||.++.++|+||+| +|+
T Consensus 9 ~~m~i~v~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D-~g~i 87 (334)
T 2pkf_A 9 SHMTIAVTGSIATDHLMRFPGRFSEQLLPEHLHKVSLSFLVDDLVMHRGGVAGNMAFAIGVLGGEVALVGAAGAD-FADY 87 (334)
T ss_dssp CSSEEEEESCCEEEEEEECSSCTHHHHTTSCGGGCCCCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEECGG-GHHH
T ss_pred cCCeEEEECChhheEEEecChHHhhhhchhhccccccccccccceecCCChHHHHHHHHHHcCCCeEEEEEEeCc-hHHH
Confidence 4568999999999999998 66677766655 4788899999999999999999999999999999 887
Q ss_pred --cHHhcCcc
Q 033400 110 --CWNTGNLL 117 (120)
Q Consensus 110 --~~~~~~~~ 117 (120)
.|++.||+
T Consensus 88 ~~~L~~~gV~ 97 (334)
T 2pkf_A 88 RDWLKARGVN 97 (334)
T ss_dssp HHHHHTTTEE
T ss_pred HHHHHHCCCc
Confidence 33345654
No 21
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=99.35 E-value=1.3e-12 Score=103.19 Aligned_cols=72 Identities=19% Similarity=0.135 Sum_probs=59.2
Q ss_pred CCCCcEEEEccccceeeeecCCCCCCCCce-eceeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhccc----HHhcC
Q 033400 41 QEAAEPMIIGGMVLDIHATPSIPANPRTTT-LGKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIYC----WNTGN 115 (120)
Q Consensus 41 ~~~~~VlvvGs~~iDii~~v~~~p~~g~~~-~~~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~~----~~~~~ 115 (120)
.++++|+|+|++++|++...+ ++.. ...+...+||+++|+|++++|||.++.++|.||+|.+|+. |++.|
T Consensus 24 ~~~~~vlviG~~~iD~~~~~~-----g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~~L~~~G 98 (336)
T 4du5_A 24 TSALDVITFGEAMMLLVADRP-----GPLEHAEAFHKRTAGAETNVAIGLARLGLKVGWASRLGTDSMGRYLLAAMAAEG 98 (336)
T ss_dssp --CEEEEEECCCEEEEEESSS-----SCGGGCCEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHTTT
T ss_pred CCCCCEEEEChhhhhccCCCC-----CccchhhheeecCCCHHHHHHHHHHhCCCcEEEEEEeCCCHHHHHHHHHHHHcC
Confidence 346799999999999987542 3343 3478899999999999999999999999999999999984 55567
Q ss_pred cc
Q 033400 116 LL 117 (120)
Q Consensus 116 ~~ 117 (120)
|+
T Consensus 99 V~ 100 (336)
T 4du5_A 99 ID 100 (336)
T ss_dssp CE
T ss_pred CC
Confidence 65
No 22
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=99.33 E-value=2.1e-12 Score=101.76 Aligned_cols=70 Identities=16% Similarity=0.152 Sum_probs=55.9
Q ss_pred CCcEEEEccccceeeeecCCCCCCCCc-eeceeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhcc----cHHhcCcc
Q 033400 43 AAEPMIIGGMVLDIHATPSIPANPRTT-TLGKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNLL 117 (120)
Q Consensus 43 ~~~VlvvGs~~iDii~~v~~~p~~g~~-~~~~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~----~~~~~~~~ 117 (120)
.++|+|+|.+.+|+.- + .+... ...++...+||+++|+|++|+|||.++.|+|+||+|.+|+ .|++.||+
T Consensus 24 m~kv~~~GE~m~~l~p--~---~~~~~~~~~~~~~~~GG~~aNvA~~larLG~~~~~ig~vG~D~~G~~l~~~L~~~GVd 98 (351)
T 4gm6_A 24 MKQVVTIGELLMRLST--Q---QGIPFSQTTALDIHIGGAEANVAVNLSKLGHPTRIATVVPANPIGKMAVEHLWRHQVD 98 (351)
T ss_dssp -CEEEEECCCEEEEEC--C---TTCCGGGCSEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHHTTEE
T ss_pred cCCEEEEcceeEEecC--C---CCCCccccCeEEEecCChHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHHcCCC
Confidence 4589999999999752 1 11111 2347889999999999999999999999999999999998 46667775
No 23
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=99.33 E-value=1.9e-12 Score=101.79 Aligned_cols=69 Identities=9% Similarity=0.036 Sum_probs=57.6
Q ss_pred CcEEEEccccceeeeecCCCCCCCCc-eeceeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhcc----cHHhcCcc
Q 033400 44 AEPMIIGGMVLDIHATPSIPANPRTT-TLGKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNLL 117 (120)
Q Consensus 44 ~~VlvvGs~~iDii~~v~~~p~~g~~-~~~~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~----~~~~~~~~ 117 (120)
++|+|+|++++|++. +.+++. ....+...+||+++|+|++++|||.++.++|+||+|.+|+ .|++.||+
T Consensus 3 ~~v~viG~~~~D~~~-----~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~ 76 (346)
T 3ktn_A 3 LKIAAFGEVMLRFTP-----PEYLMLEQTEQLRMNFVGTGVNLLANLAHFQLETALITKLPANRLGEAGKAALRKLGIS 76 (346)
T ss_dssp CEEEEECCCEEEEEC-----STTCCTTTCSCCEEEEECHHHHHHHHHHHTTCEEEEEEEECSSHHHHHHHHHHHHTTCB
T ss_pred CcEEEeChhhhhhcC-----CCCCcccccceeEEeccCHHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHcCCc
Confidence 579999999999884 223333 3347889999999999999999999999999999999997 45567775
No 24
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=99.33 E-value=1.4e-12 Score=102.77 Aligned_cols=72 Identities=24% Similarity=0.233 Sum_probs=61.2
Q ss_pred cEEEEccccceeeeec----------CCCCCCCCcee-ceeeEecCChHHHHHHHHHHcCCCcEEEEeecC-Chhcc---
Q 033400 45 EPMIIGGMVLDIHATP----------SIPANPRTTTL-GKANYVLGGVARNVAECMSKLGAKPYMISALGL-DMEIY--- 109 (120)
Q Consensus 45 ~VlvvGs~~iDii~~v----------~~~p~~g~~~~-~~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGd-D~~G~--- 109 (120)
+|+|+|++++|+++++ ++.|..+++.. ..+...+||+++|+|++++|||.++.++|+||+ | +|+
T Consensus 2 ~i~v~G~~~iD~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~~D-~g~i~~ 80 (326)
T 3b1n_A 2 ATLICGSIAYDNIMTFEGRFREHILPDQVHLINLSFLVPTMRREFGGCAGNIAYALNLLGGDARMMGTLGAVD-AQPYLD 80 (326)
T ss_dssp CEEEESCCEEEEEEECSSCGGGGCCTTSSSSCEEEEECCSCCCEEECHHHHHHHHHHHTTCCEEEEEEEETTT-CHHHHH
T ss_pred cEEEECcceEEEEEecchhhhhhccccccCCCCcceecccceeccCCHHHHHHHHHHHcCCCeeEEEEECCcC-HHHHHH
Confidence 6999999999999998 67777776655 477889999999999999999999999999999 9 786
Q ss_pred cHHhcCcc
Q 033400 110 CWNTGNLL 117 (120)
Q Consensus 110 ~~~~~~~~ 117 (120)
.|++.||+
T Consensus 81 ~L~~~gVd 88 (326)
T 3b1n_A 81 RMDALGLS 88 (326)
T ss_dssp HHHHHTCE
T ss_pred HHHHcCCc
Confidence 33445654
No 25
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=99.33 E-value=2.7e-12 Score=99.65 Aligned_cols=69 Identities=12% Similarity=0.098 Sum_probs=57.2
Q ss_pred CcEEEEccccceeeeecCCCCCCCCce-eceeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhcc----cHHhcCcc
Q 033400 44 AEPMIIGGMVLDIHATPSIPANPRTTT-LGKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNLL 117 (120)
Q Consensus 44 ~~VlvvGs~~iDii~~v~~~p~~g~~~-~~~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~----~~~~~~~~ 117 (120)
++|+|+|++++|++. +.+++.. ..++...+||+++|+|++++|||.++.++|+||+|.+|+ .|++.||+
T Consensus 2 ~~v~viG~~~~D~~~-----~~~~~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~vG~D~~g~~~~~~l~~~gv~ 75 (313)
T 2v78_A 2 VDVIALGEPLIQFNS-----FNPGPLRFVNYFEKHVAGSELNFCIAVVRNHLSCSLIARVGNDEFGKNIIEYSRAQGID 75 (313)
T ss_dssp CCEEEECCCEEEEEE-----SSSSCGGGCCEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHTTCB
T ss_pred CeEEEECcceEEEec-----CCCCcccccceeEecCCChHHHHHHHHHHCCCcEEEEEEeCCCHHHHHHHHHHHHcCCc
Confidence 479999999999985 2233333 347889999999999999999999999999999999998 44556765
No 26
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=99.32 E-value=1.6e-12 Score=103.69 Aligned_cols=76 Identities=17% Similarity=0.153 Sum_probs=61.6
Q ss_pred CCCcEEEEccccceeeeecCC-------CCCCCCceec------------eeeEecCChHHHHHHHHHHcCCCcEEEEee
Q 033400 42 EAAEPMIIGGMVLDIHATPSI-------PANPRTTTLG------------KANYVLGGVARNVAECMSKLGAKPYMISAL 102 (120)
Q Consensus 42 ~~~~VlvvGs~~iDii~~v~~-------~p~~g~~~~~------------~~~~~~GG~aaNvAvalaRLG~~v~lvs~V 102 (120)
++++|+|+|++++|++++++. .+..+..... .....+||+++|+|++++|||.++.++|+|
T Consensus 24 ~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~li~~~~~~~l~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~ig~v 103 (352)
T 4e3a_A 24 TRFDVLTVGNAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRMGPALEASGGSAGNTAAGVANLGGKAAYFGNV 103 (352)
T ss_dssp CSEEEEEECCCEEEEEEECCHHHHHHTTCCTTSEEECCHHHHHHHHHHSCSCEEEECCHHHHHHHHHHHHTCCEEEECCC
T ss_pred CcccEEEECCceeeEEEecCHHHHHHcCCCCCcceEeCHHHHHHHHHHhhhccEecCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 357999999999999999985 3333433221 346889999999999999999999999999
Q ss_pred cCChhcc----cHHhcCcc
Q 033400 103 GLDMEIY----CWNTGNLL 117 (120)
Q Consensus 103 GdD~~G~----~~~~~~~~ 117 (120)
|+|.+|+ .+++.||+
T Consensus 104 G~D~~G~~l~~~l~~~GV~ 122 (352)
T 4e3a_A 104 AADQLGDIFTHDIRAQGVH 122 (352)
T ss_dssp CSSHHHHHHHHHHHHTTCE
T ss_pred CCChHHHHHHHHHHHcCCc
Confidence 9999998 45556664
No 27
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=99.32 E-value=1.9e-12 Score=103.74 Aligned_cols=76 Identities=21% Similarity=0.171 Sum_probs=62.9
Q ss_pred CCCcEEEEccccceeeeecCC-C-----CCCCCce--------------eceeeEecCChHHHHHHHHHHc---CCCcEE
Q 033400 42 EAAEPMIIGGMVLDIHATPSI-P-----ANPRTTT--------------LGKANYVLGGVARNVAECMSKL---GAKPYM 98 (120)
Q Consensus 42 ~~~~VlvvGs~~iDii~~v~~-~-----p~~g~~~--------------~~~~~~~~GG~aaNvAvalaRL---G~~v~l 98 (120)
++++|+|+|++++|+++.++. . |.+|+.. ...+...+||+++|+|++++|| |.++.|
T Consensus 31 ~~~~vlviG~~~lD~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~GG~~~NvA~~la~Lg~~g~~v~~ 110 (383)
T 2abs_A 31 GPMRVFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTLDQFNPTSLPGGSALNSVRVVQKLLRKPGSAGY 110 (383)
T ss_dssp CCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGGGGGGTGGGGCCEEEEESHHHHHHHHHHHHHCSTTSEEE
T ss_pred CCceEEEECcchheeEeccCHHHHHhcCCCCCceeechhhHHHHHHhhccccceeeCCChHHHHHHHHHHhccCCCcEEE
Confidence 467899999999999999876 2 4555543 2367889999999999999999 899999
Q ss_pred EEeecCChhccc----HHhcCcc
Q 033400 99 ISALGLDMEIYC----WNTGNLL 117 (120)
Q Consensus 99 vs~VGdD~~G~~----~~~~~~~ 117 (120)
+|+||+|.+|+. |++.||+
T Consensus 111 ig~vG~D~~G~~i~~~L~~~GV~ 133 (383)
T 2abs_A 111 MGAIGDDPRGQVLKELCDKEGLA 133 (383)
T ss_dssp EEEECSSHHHHHHHHHHHHHTCE
T ss_pred EEEecCChhHHHHHHHHHHcCCc
Confidence 999999999984 4456664
No 28
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=99.32 E-value=1.5e-12 Score=102.28 Aligned_cols=76 Identities=18% Similarity=0.162 Sum_probs=62.2
Q ss_pred CCCcEEEEccccceeeeecCCC------CCCCCcee---------------ceeeEecCChHHHHHHHHHHcC----CCc
Q 033400 42 EAAEPMIIGGMVLDIHATPSIP------ANPRTTTL---------------GKANYVLGGVARNVAECMSKLG----AKP 96 (120)
Q Consensus 42 ~~~~VlvvGs~~iDii~~v~~~------p~~g~~~~---------------~~~~~~~GG~aaNvAvalaRLG----~~v 96 (120)
+.++|+|+|++++|++++++.. +.+|+.+. .++...+||+++|+|++++||| .++
T Consensus 5 ~~~~v~viG~~~~D~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~lgg~~~~~~ 84 (345)
T 1bx4_A 5 RENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAA 84 (345)
T ss_dssp CTTCEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGHHHHHHHHHHSCCEEEEECHHHHHHHHHHHHHCSSTTCE
T ss_pred ccccEEEECCcceeEEEecCHHHHHHcCCCCCcEEEchHHHHHHHHHHhccCCceecCCcHHHHHHHHHHHhcCCCCCcE
Confidence 3678999999999999998861 44443321 3678899999999999999996 999
Q ss_pred EEEEeecCChhcc----cHHhcCcc
Q 033400 97 YMISALGLDMEIY----CWNTGNLL 117 (120)
Q Consensus 97 ~lvs~VGdD~~G~----~~~~~~~~ 117 (120)
.|+|.||+|.+|+ .|++.||+
T Consensus 85 ~~ig~vG~D~~G~~i~~~L~~~gv~ 109 (345)
T 1bx4_A 85 TFFGCIGIDKFGEILKRKAAEAHVD 109 (345)
T ss_dssp EEEEEEESSHHHHHHHHHHHHTTCE
T ss_pred EEEEEeCCChhHHHHHHHHHHcCCc
Confidence 9999999999998 44556764
No 29
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=99.32 E-value=2.2e-12 Score=99.85 Aligned_cols=69 Identities=17% Similarity=0.215 Sum_probs=57.2
Q ss_pred CcEEEEccccceeeeecCCCCCCCCce-eceeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhccc----HHhcCcc
Q 033400 44 AEPMIIGGMVLDIHATPSIPANPRTTT-LGKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIYC----WNTGNLL 117 (120)
Q Consensus 44 ~~VlvvGs~~iDii~~v~~~p~~g~~~-~~~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~~----~~~~~~~ 117 (120)
++|+|+|++++|++. +.+++.. ..++...+||+++|+|++++|||.++.++|+||+|.+|+. |++.||+
T Consensus 2 ~~v~viG~~~~D~~~-----~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~D~~g~~i~~~l~~~gv~ 75 (311)
T 2dcn_A 2 AKLITLGEILIEFNA-----LSPGPLRHVSYFEKHVAGSEANYCVAFIKQGNECGIIAKVGDDEFGYNAIEWLRGQGVD 75 (311)
T ss_dssp CEEEEESCCEEEEEE-----SSSSCGGGCCEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHTTCB
T ss_pred CCEEEECCceEEEec-----CCCCcccccceeeecCCChHHHHHHHHHHCCCceEEEEEeCCCHHHHHHHHHHHHcCCC
Confidence 479999999999987 2233333 3478889999999999999999999999999999999984 4556664
No 30
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=99.32 E-value=2.5e-12 Score=100.02 Aligned_cols=69 Identities=25% Similarity=0.225 Sum_probs=57.7
Q ss_pred CcEEEEccccceeeeecCCCCCCCCce-eceeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhcc----cHHhcCcc
Q 033400 44 AEPMIIGGMVLDIHATPSIPANPRTTT-LGKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNLL 117 (120)
Q Consensus 44 ~~VlvvGs~~iDii~~v~~~p~~g~~~-~~~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~----~~~~~~~~ 117 (120)
++|+|+|++++|++...+ ++.. ...+...+||+++|+|++++|||.++.++|.||+|.+|+ .|++.||+
T Consensus 2 ~~v~viG~~~iD~~~~~~-----g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~i~~~l~~~gv~ 75 (313)
T 3ewm_A 2 SLIASIGELLIDLISVEE-----GDLKDVRLFEKHPGGAPANVAVGVSRLGVKSSLISKVGNDPFGEYLIEELSKENVD 75 (313)
T ss_dssp CEEEEESCCEEEEEESSS-----SCTTTCCEEEEEEECHHHHHHHHHHHTTCEEEEEEEEESSHHHHHHHHHHHHTTCB
T ss_pred CcEEEECceeeeeecCCC-----CCcccccceeecCCCHHHHHHHHHHHCCCCeEEEEEeCCCHHHHHHHHHHHHcCCC
Confidence 579999999999996532 3333 347889999999999999999999999999999999998 45556765
No 31
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=99.32 E-value=3.2e-12 Score=100.00 Aligned_cols=72 Identities=17% Similarity=0.097 Sum_probs=63.1
Q ss_pred CcEEEEccccceeeeecCCCCCCCCceec-eeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhcc----cHHhcCcc
Q 033400 44 AEPMIIGGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNLL 117 (120)
Q Consensus 44 ~~VlvvGs~~iDii~~v~~~p~~g~~~~~-~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~----~~~~~~~~ 117 (120)
+.++|+|+.++|+++++++ |..|+++.. ++...+||+++|+|++++|||.++.++|.+|+ .+|+ .|++.||+
T Consensus 3 m~i~v~g~~~~D~~~~v~~-~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~-~~G~~i~~~L~~~gV~ 79 (323)
T 2f02_A 3 LIVTVTMNPSIDISYLLDH-LKLDTVNRTSQVTKTPGGKGLNVTRVIHDLGGDVIATGVLGG-FHGAFIANELKKANIP 79 (323)
T ss_dssp CEEEEESSCEEEEEEECSC-CCTTSEEEESCEEEEEESHHHHHHHHHHHHTCCEEEEEEEEH-HHHHHHHHHHHHTTCC
T ss_pred eEEEEecCceeEEEEecCC-cccCCEEEeceEEEcCCcHHHHHHHHHHHcCCCeEEEEEecc-chHHHHHHHHHHCCCc
Confidence 5799999999999999998 677777765 88999999999999999999999999999997 5897 44556765
No 32
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=99.29 E-value=4.6e-12 Score=98.18 Aligned_cols=69 Identities=19% Similarity=0.207 Sum_probs=56.5
Q ss_pred CcEEEEccccceeeeecCCCCCCCCce-eceeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhccc----HHhcCcc
Q 033400 44 AEPMIIGGMVLDIHATPSIPANPRTTT-LGKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIYC----WNTGNLL 117 (120)
Q Consensus 44 ~~VlvvGs~~iDii~~v~~~p~~g~~~-~~~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~~----~~~~~~~ 117 (120)
++|+|+|++++|++. +.+++.. ..++...+||+++|+|++++|||.++.++|.||+|.+|+. |++.||+
T Consensus 2 ~~i~viG~~~~D~~~-----~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~D~~g~~i~~~L~~~gv~ 75 (309)
T 1v1a_A 2 LEVVTAGEPLVALVP-----QEPGHLRGKRLLEVYVGGAEVNVAVALARLGVKVGFVGRVGEDELGAMVEERLRAEGVD 75 (309)
T ss_dssp CSEEEESCCEEEEEC-----SSSSCGGGCCEEEEEEECHHHHHHHHHHHHTCCEEEEEEECSSHHHHHHHHHHHHHTCB
T ss_pred CcEEEEccceEEEec-----CCCCcccchheeeeecCcHHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHHcCCC
Confidence 479999999999984 2233332 3478889999999999999999999999999999999984 4456664
No 33
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=99.29 E-value=4.1e-12 Score=99.66 Aligned_cols=72 Identities=17% Similarity=0.106 Sum_probs=57.4
Q ss_pred CCcEEEEccccceeeeecCCCCCCCCceec-eeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhcc----cHHhcCcc
Q 033400 43 AAEPMIIGGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNLL 117 (120)
Q Consensus 43 ~~~VlvvGs~~iDii~~v~~~p~~g~~~~~-~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~----~~~~~~~~ 117 (120)
.++|+|+|++++|++...+. .+..... .....+||+++|+|++++|||.++.++|.||+|.+|+ .|++.||+
T Consensus 3 m~~i~viG~~~~D~~~~~~~---~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~ 79 (330)
T 3iq0_A 3 LSKVFTIGEILVEIMASKIG---QPFDQPGIWNGPYPSGAPAIFIDQVTRLGVPCGIISCVGNDGFGDINIHRLAADGVD 79 (330)
T ss_dssp -CEEEEESCCEEEEEEEEET---CCSSSCEEEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHTTCB
T ss_pred CCCEEEEcceeEEEeccCCC---CCccccccccCcCCCCHHHHHHHHHHHCCCcEEEEEEeCCChHHHHHHHHHHHcCCC
Confidence 35899999999999986322 2222222 4567899999999999999999999999999999997 45567765
No 34
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=99.29 E-value=1.3e-12 Score=102.97 Aligned_cols=76 Identities=17% Similarity=0.100 Sum_probs=62.1
Q ss_pred CCCcEEEEccccceeeeecCC--------------------CCCCCCcee-ceeeEecCChHHHHHHHHHHc----CCC-
Q 033400 42 EAAEPMIIGGMVLDIHATPSI--------------------PANPRTTTL-GKANYVLGGVARNVAECMSKL----GAK- 95 (120)
Q Consensus 42 ~~~~VlvvGs~~iDii~~v~~--------------------~p~~g~~~~-~~~~~~~GG~aaNvAvalaRL----G~~- 95 (120)
++.+|+++|++++|+++.++. .|..++... ..+...+||+++|+|+++++| |.+
T Consensus 6 ~~~~v~~iG~~~lD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~~~~~~~~~~~~~GG~~~N~a~~la~L~~~~G~~~ 85 (347)
T 3otx_A 6 APLRVYVQCNPLLDVSAHVSDEFLVKYGLERGTAILLSERQKGIFDDIEKMPNVRYVPGGSGLNVARVAQWMQQAYKGKF 85 (347)
T ss_dssp CCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGTTHHHHHHTSTTCEEEECCHHHHHHHHHHHTTGGGTTSS
T ss_pred CCCcEEEECCceeeEEEecCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEecCCHHHHHHHHHHHhcccCCCCe
Confidence 467899999999999999985 333333322 367899999999999999999 999
Q ss_pred cEEEEeecCChhcc----cHHhcCcc
Q 033400 96 PYMISALGLDMEIY----CWNTGNLL 117 (120)
Q Consensus 96 v~lvs~VGdD~~G~----~~~~~~~~ 117 (120)
+.++|+||+|.+|+ .|++.||+
T Consensus 86 ~~~ig~vG~D~~g~~~~~~l~~~GV~ 111 (347)
T 3otx_A 86 VTYVGCIADDRYGKVLKEAAEHEGIV 111 (347)
T ss_dssp EEEECEECSSHHHHHHHHHHHHHTCE
T ss_pred EEEEEEecCChHHHHHHHHHHHCCCc
Confidence 99999999999998 45556664
No 35
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=99.29 E-value=4.1e-12 Score=98.26 Aligned_cols=71 Identities=18% Similarity=0.104 Sum_probs=60.7
Q ss_pred cEEEE-ccccceeeeecCCCCCCCCceec-eeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhcc----cHHhcCcc
Q 033400 45 EPMII-GGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNLL 117 (120)
Q Consensus 45 ~Vlvv-Gs~~iDii~~v~~~p~~g~~~~~-~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~----~~~~~~~~ 117 (120)
+|++| |+.++|+++.+++ +.+|+++.. ++...+||+++|+|++++|||.++.++|.||+| +|+ .|++.||+
T Consensus 3 ~I~~v~g~~~~D~~~~~~~-~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~~gv~ 79 (309)
T 3cqd_A 3 RIYTLTLAPSLDSATITPQ-IYPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGA-TGEHLVSLLADENVP 79 (309)
T ss_dssp CEEEECSSCEEEEEEEESC-CCSSSEEECCCCEEEEESHHHHHHHHHHHTTCCEEEEEEECHH-HHHHHHHHHHHTTCC
T ss_pred eEEEEeccchheEEEEcCC-CcCCCeeeccceeecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcCCC
Confidence 57755 6999999999998 567777665 789999999999999999999999999999998 897 44557765
No 36
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=99.29 E-value=4.5e-12 Score=98.08 Aligned_cols=72 Identities=18% Similarity=0.094 Sum_probs=61.6
Q ss_pred CcEEEE-ccccceeeeecCCCCCCCCceec-eeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhcc----cHHhcCcc
Q 033400 44 AEPMII-GGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNLL 117 (120)
Q Consensus 44 ~~Vlvv-Gs~~iDii~~v~~~p~~g~~~~~-~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~----~~~~~~~~ 117 (120)
++|++| ++.++|++++++++ .+|++... ++...+||+++|+|++++|||.++.++|.||+| +|+ .|++.||+
T Consensus 2 ~~i~~v~~n~~~D~~~~v~~~-~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~~gv~ 79 (309)
T 3umo_A 2 VRIYTLTLAPSLDSATITPQI-YPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGA-TGEHLVSLLADENVP 79 (309)
T ss_dssp CCEEEECSSCEEEEEEEESCC-CSSSEEECCCCEEEEESHHHHHHHHHHHTTCCEEEEEEECHH-HHHHHHHHHHHTTCC
T ss_pred CcEEEEecchhheEEEEcCcc-cCCCeEEeceeeecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcCCc
Confidence 457666 56999999999998 67777665 899999999999999999999999999999999 997 45556664
No 37
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=99.28 E-value=3.3e-12 Score=102.16 Aligned_cols=75 Identities=19% Similarity=0.247 Sum_probs=59.6
Q ss_pred CCCCcEEEEccccceeeee--cCC----CCCCCCceeceeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhcc----c
Q 033400 41 QEAAEPMIIGGMVLDIHAT--PSI----PANPRTTTLGKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----C 110 (120)
Q Consensus 41 ~~~~~VlvvGs~~iDii~~--v~~----~p~~g~~~~~~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~----~ 110 (120)
.+.++|+|+|++++|++.+ +++ .|.+. .....+...+||+ +|+|++++|||.++.++|+||+|.+|+ .
T Consensus 51 ~~~~~ilvvG~~~~D~~~~g~v~r~~p~~p~~~-~~~~~~~~~~GG~-~NvA~~la~LG~~v~~ig~vG~D~~G~~i~~~ 128 (352)
T 4e84_A 51 LARSRVLVVGDVMLDRYWFGNVDRISPEAPVPV-VHVQRQEERLGGA-ANVARNAVTLGGQAGLLCVVGCDEPGERIVEL 128 (352)
T ss_dssp HTTCEEEEEECEEEEEEEEEEEEEECSSSSSEE-EEEEEEEEEEEEH-HHHHHHHHHTTCEEEEEEEEESSHHHHHHHHH
T ss_pred cCCCcEEEECccceEEEEeecccccCCCCCcce-EEeeEEEEecChH-HHHHHHHHHcCCCEEEEEEeCCChhHHHHHHH
Confidence 3467999999999999987 332 23332 2334788999998 899999999999999999999999998 4
Q ss_pred HHhcCcc
Q 033400 111 WNTGNLL 117 (120)
Q Consensus 111 ~~~~~~~ 117 (120)
|++.||+
T Consensus 129 L~~~GV~ 135 (352)
T 4e84_A 129 LGSSGVT 135 (352)
T ss_dssp HTTTSCE
T ss_pred HHHcCCc
Confidence 4556665
No 38
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=99.26 E-value=6.7e-12 Score=99.29 Aligned_cols=65 Identities=22% Similarity=0.277 Sum_probs=55.2
Q ss_pred CCcEEEEccccceeeeecCCCCCCCCceeceeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhcccH----HhcCcc
Q 033400 43 AAEPMIIGGMVLDIHATPSIPANPRTTTLGKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIYCW----NTGNLL 117 (120)
Q Consensus 43 ~~~VlvvGs~~iDii~~v~~~p~~g~~~~~~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~~~----~~~~~~ 117 (120)
.++|+|+|++++|++... ...+...+||+++|+|++++|||.++.+++.||+|.+|+.+ ++.||+
T Consensus 24 m~~ilviG~~~~D~~~~~----------~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~~L~~~gVd 92 (339)
T 1tyy_A 24 MNKVWVIGDASVDLVPEK----------QNSYLKCPGGASANVGVCVARLGGECGFIGCLGDDDAGRFLRQVFQDNGVD 92 (339)
T ss_dssp -CCEEEESCCEEEEEECS----------SSEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHTTTEE
T ss_pred cCCEEEECcceeEEeccC----------CCceEEcCCCHHHHHHHHHHHcCCCeEEEEeeCCCHHHHHHHHHHHHcCCC
Confidence 347999999999999863 23567889999999999999999999999999999999844 456664
No 39
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=99.26 E-value=8.9e-12 Score=98.08 Aligned_cols=74 Identities=11% Similarity=0.025 Sum_probs=62.9
Q ss_pred CCCcEEEEccccceeeeecCCCCCCCCceec-eeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhcc----cHHhcCc
Q 033400 42 EAAEPMIIGGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNL 116 (120)
Q Consensus 42 ~~~~VlvvGs~~iDii~~v~~~p~~g~~~~~-~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~----~~~~~~~ 116 (120)
.++.++|+|+.++|++++++++ .+|++... .+...+||+++|+|++++|||.++.++|+||+ .+|+ .|++.||
T Consensus 19 ~~Mi~~v~G~~~~D~~~~~~~~-~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~-~~G~~l~~~L~~~gV 96 (330)
T 2jg1_A 19 SHMILTLTLNPSVDISYPLTAL-KLDDVNRVQEVSKTAGGKGLNVTRVLAQVGEPVLASGFIGG-ELGQFIAKKLDHADI 96 (330)
T ss_dssp SCCEEEEESSCEEEEEEEESCC-CTTSEEEESCCEEEEECHHHHHHHHHHHHTCCEEEEEEEEH-HHHHHHHHHHHHTTC
T ss_pred CcEEEEEecchhheEEEecCCc-cCCceEEeceEEEcCCchHHHHHHHHHHhCCCeEEEEEecc-hhHHHHHHHHHHCCC
Confidence 3466678899999999999986 66777665 78999999999999999999999999999996 6897 4455676
Q ss_pred c
Q 033400 117 L 117 (120)
Q Consensus 117 ~ 117 (120)
+
T Consensus 97 ~ 97 (330)
T 2jg1_A 97 K 97 (330)
T ss_dssp E
T ss_pred c
Confidence 5
No 40
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=99.26 E-value=6.3e-12 Score=99.05 Aligned_cols=67 Identities=16% Similarity=0.174 Sum_probs=57.5
Q ss_pred CCCcEEEEccccceeeeecCCCCCCCCceeceeeEecCChHHHHHHHHHHc--CCCcEEEEeecCChhcc----cHHhcC
Q 033400 42 EAAEPMIIGGMVLDIHATPSIPANPRTTTLGKANYVLGGVARNVAECMSKL--GAKPYMISALGLDMEIY----CWNTGN 115 (120)
Q Consensus 42 ~~~~VlvvGs~~iDii~~v~~~p~~g~~~~~~~~~~~GG~aaNvAvalaRL--G~~v~lvs~VGdD~~G~----~~~~~~ 115 (120)
+.++|+|+|++++|++... ++ ..+...+||+++|+|++++|| |.++.++|+||+|.+|+ .|++.|
T Consensus 22 ~m~~i~viG~~~iD~~~~~------~~---~~~~~~~GG~~~NvA~~la~Lg~G~~~~~ig~vG~D~~G~~l~~~L~~~G 92 (328)
T 4e69_A 22 SMMHILSIGECMAELAPAD------LP---GTYRLGFAGDTFNTAWYLARLRPESRISYFSAIGDDALSQQMRAAMSAAG 92 (328)
T ss_dssp SSCEEEEESCCEEEEEECS------ST---TEEEEEEECHHHHHHHHHHHHCTTSEEEEECEECSSHHHHHHHHHHHHTT
T ss_pred cCCcEEEecCcEEEEecCC------CC---CceEEecCCHHHHHHHHHHhcCCCCcEEEEEeeCCCHHHHHHHHHHHHcC
Confidence 4568999999999999851 21 578889999999999999999 99999999999999997 455667
Q ss_pred cc
Q 033400 116 LL 117 (120)
Q Consensus 116 ~~ 117 (120)
|+
T Consensus 93 V~ 94 (328)
T 4e69_A 93 ID 94 (328)
T ss_dssp EE
T ss_pred Cc
Confidence 65
No 41
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=99.26 E-value=1.5e-11 Score=95.78 Aligned_cols=72 Identities=19% Similarity=0.150 Sum_probs=62.1
Q ss_pred CcEEEEcccccee-eeecCCCCCCCCceec-eeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhcc----cHHhcCcc
Q 033400 44 AEPMIIGGMVLDI-HATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNLL 117 (120)
Q Consensus 44 ~~VlvvGs~~iDi-i~~v~~~p~~g~~~~~-~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~----~~~~~~~~ 117 (120)
+-+.|.++.++|+ ++.++++ .+|++... .+...+||+++|+|++++|||.++.++|.||+| +|+ .+++.||+
T Consensus 3 mi~tvt~np~iD~~~~~v~~~-~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~~gv~ 80 (320)
T 3ie7_A 3 LIYTITLNPAIDRLLFIRGEL-EKRKTNRVIKTEFDCGGKGLHVSGVLSKFGIKNEALGIAGSD-NLDKLYAILKEKHIN 80 (320)
T ss_dssp CEEEEESSCEEEEEEEESSSC-CTTSCCCCSEEEEEEESHHHHHHHHHHHHTCCEEEEEEEEST-THHHHHHHHHHTTCC
T ss_pred eEEEEecchHHeeeEEEcCCc-cCCCeeEeceeeecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcCCc
Confidence 4456778899999 9999987 67777664 899999999999999999999999999999998 997 45566765
No 42
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=99.23 E-value=5.6e-12 Score=98.30 Aligned_cols=63 Identities=17% Similarity=0.275 Sum_probs=53.4
Q ss_pred CcEEEEccccceeeeecCCCCCCCCceeceeeEecCChHHHHHHHHHHcC----CCcEEEEeecCChhcc----cHHhcC
Q 033400 44 AEPMIIGGMVLDIHATPSIPANPRTTTLGKANYVLGGVARNVAECMSKLG----AKPYMISALGLDMEIY----CWNTGN 115 (120)
Q Consensus 44 ~~VlvvGs~~iDii~~v~~~p~~g~~~~~~~~~~~GG~aaNvAvalaRLG----~~v~lvs~VGdD~~G~----~~~~~~ 115 (120)
++|+|+|++++|++... ..+...+||+++|+|++++||| .++.++|+||+|.+|+ .|++.|
T Consensus 5 ~~i~viG~~~~D~~~~~-----------~~~~~~~GG~~~NvA~~la~LG~~~~~~~~~ig~vG~D~~G~~l~~~L~~~G 73 (319)
T 3lhx_A 5 KKIAVIGECMIELSEKG-----------ADVKRGFGGDTLNTSVYIARQVDPAALTVHYVTALGTDSFSQQMLDAWHGEN 73 (319)
T ss_dssp EEEEEESCCEEEEEC--------------CCEEEEECHHHHHHHHHHTTSCTTTEEEEEECEECSSHHHHHHHHHHHTTT
T ss_pred CceeeechhhhhhccCC-----------CceEEecCChHHHHHHHHHHcCCCCCCcEEEEEEeCCCHHHHHHHHHHHHcC
Confidence 47999999999998543 2467889999999999999999 9999999999999998 455567
Q ss_pred cc
Q 033400 116 LL 117 (120)
Q Consensus 116 ~~ 117 (120)
|+
T Consensus 74 V~ 75 (319)
T 3lhx_A 74 VD 75 (319)
T ss_dssp EE
T ss_pred CC
Confidence 65
No 43
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=99.22 E-value=1.3e-11 Score=96.32 Aligned_cols=63 Identities=24% Similarity=0.337 Sum_probs=53.5
Q ss_pred CcEEEEccccceeeeecCCCCCCCCceeceeeEecCChHHHHHHHHHHcCC-CcEEEEeecCChhcc----cHHhcCcc
Q 033400 44 AEPMIIGGMVLDIHATPSIPANPRTTTLGKANYVLGGVARNVAECMSKLGA-KPYMISALGLDMEIY----CWNTGNLL 117 (120)
Q Consensus 44 ~~VlvvGs~~iDii~~v~~~p~~g~~~~~~~~~~~GG~aaNvAvalaRLG~-~v~lvs~VGdD~~G~----~~~~~~~~ 117 (120)
++|+|+|++++|++... ..+....+||+++|+|++++|||. ++.++|.||+| +|+ .|++.||+
T Consensus 3 ~~ilviG~~~iD~~~~~----------~~~~~~~~GG~~~NvA~~la~LG~~~~~~ig~vG~D-~g~~~~~~L~~~gVd 70 (313)
T 3kd6_A 3 LSLLVIGSLAFDDIETP----------FGRSDNTLGGSSTYIALSASYFTDEPIRMVGVVGSD-FGKEHFDLLHAKNID 70 (313)
T ss_dssp CCEEEESCCEEEEEECS----------SCEEEEEEECHHHHHHHHHTTTCSSCEEEEEEEETT-SCHHHHHHHHHTTEE
T ss_pred ccEEEEeEEEEeeecCC----------CCcccccCCCHHHHHHHHHHHhCCCceEEEEecCCC-cHHHHHHHHHHcCCC
Confidence 57999999999999632 124678899999999999999999 99999999999 997 45556664
No 44
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=99.21 E-value=4.1e-12 Score=101.43 Aligned_cols=76 Identities=18% Similarity=0.233 Sum_probs=60.4
Q ss_pred CCCcEEEEccccceeeeecCCC------CCCCCcee---------------ceeeEecCChHHHHHHHHHHc---CCCcE
Q 033400 42 EAAEPMIIGGMVLDIHATPSIP------ANPRTTTL---------------GKANYVLGGVARNVAECMSKL---GAKPY 97 (120)
Q Consensus 42 ~~~~VlvvGs~~iDii~~v~~~------p~~g~~~~---------------~~~~~~~GG~aaNvAvalaRL---G~~v~ 97 (120)
++.+|+++|++++|+++.++.. +..|.... ..+...+||+++|+|+++++| |.++.
T Consensus 22 ~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~e~~~~~~~~~~~GG~~~N~a~~~~~L~~lG~~~~ 101 (365)
T 3loo_A 22 RDGMLVGLGNPLLDISAVVEKDLLNKYDMQPNNAILAEEKHMPMYQELIEKYQAEYIAGGSVQNSLRVAQWILQRPRTAI 101 (365)
T ss_dssp CTTSEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGTHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHTCTTSEE
T ss_pred CCccEEEECCCeEeEEEecCHHHHHHcCCCCCCceechhHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhhcCCCcEE
Confidence 4568999999999999999962 23332221 256789999999999999987 99999
Q ss_pred EEEeecCChhccc----HHhcCcc
Q 033400 98 MISALGLDMEIYC----WNTGNLL 117 (120)
Q Consensus 98 lvs~VGdD~~G~~----~~~~~~~ 117 (120)
++|+||+|.+|+. +++.||+
T Consensus 102 ~ig~vG~D~~g~~~~~~l~~~GV~ 125 (365)
T 3loo_A 102 FFGCVGQDEYARILEERATSNGVN 125 (365)
T ss_dssp EEEEEESBHHHHHHHHHHHHHTCE
T ss_pred EEEEecCCchHHHHHHHHHHCCCc
Confidence 9999999999984 4556664
No 45
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=99.18 E-value=5e-11 Score=91.86 Aligned_cols=70 Identities=11% Similarity=0.014 Sum_probs=60.7
Q ss_pred EEEEccccceeeeecCCCCCCCCceec-eeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhcc----cHHhcCcc
Q 033400 46 PMIIGGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY----CWNTGNLL 117 (120)
Q Consensus 46 VlvvGs~~iDii~~v~~~p~~g~~~~~-~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~----~~~~~~~~ 117 (120)
+.|.|+.++|+++++++ +..|++... ++...+||+++|+|++++|||.++.++|.||+ .+|+ .|++.||+
T Consensus 3 ~tvt~n~~~D~~~~~~~-~~~g~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~~~~vG~-~~g~~i~~~l~~~gv~ 77 (306)
T 2jg5_A 3 YTVTFNPSIDYVIFTND-FKIDGLNRATATYKFAGGKGINVSRVLKTLDVESTALGFAGG-FPGKFIIDTLNNSAIQ 77 (306)
T ss_dssp EEEESSCEEEEEEECSS-CCTTSEEECSEEEEEEESHHHHHHHHHHHTTCCCEEEEEECH-HHHHHHHHHHHHTTCE
T ss_pred EEEecCceEEEEEEcCC-cccCceEEeceeEecCCchHHHHHHHHHHcCCCeeEEEEecC-cchHHHHHHHHHCCCc
Confidence 56889999999999998 466777665 89999999999999999999999999999999 6897 44556664
No 46
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.17 E-value=3.3e-11 Score=92.46 Aligned_cols=58 Identities=22% Similarity=0.260 Sum_probs=50.4
Q ss_pred CcEEEEccccceeeeecCCCCCCCCceeceeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhccc----HHhcCc
Q 033400 44 AEPMIIGGMVLDIHATPSIPANPRTTTLGKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIYC----WNTGNL 116 (120)
Q Consensus 44 ~~VlvvGs~~iDii~~v~~~p~~g~~~~~~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~~----~~~~~~ 116 (120)
++|+|+|++++|++ |. ...+||+++|+|++++|||.++.++|.||+|.+|+. |++.||
T Consensus 4 ~~v~viG~~~~D~~------p~---------~~~~GG~~~N~A~~la~LG~~~~~~~~vG~D~~g~~~~~~l~~~gv 65 (296)
T 2qhp_A 4 NIIVGMGEALWDVL------PE---------GKKIGGAPANFAYHVSQFGFDSRVVSAVGNDELGDEIMEVFKEKQL 65 (296)
T ss_dssp CEEEEESCCEEEEE------TT---------EEEEECHHHHHHHHHHHTTCEEEEEEEEESSHHHHHHHHHHHHTTC
T ss_pred ceEEEEchhheEec------CC---------CCCCCCHHHHHHHHHHHcCCCeeEEEEeCCChHHHHHHHHHHHcCC
Confidence 47999999999997 11 267999999999999999999999999999999984 445666
No 47
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=99.15 E-value=8.1e-11 Score=91.02 Aligned_cols=70 Identities=13% Similarity=0.075 Sum_probs=60.9
Q ss_pred EEEEccccceeeeecCCCCCCCCceec-eeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhccc----HHhcCcc
Q 033400 46 PMIIGGMVLDIHATPSIPANPRTTTLG-KANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIYC----WNTGNLL 117 (120)
Q Consensus 46 VlvvGs~~iDii~~v~~~p~~g~~~~~-~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~~----~~~~~~~ 117 (120)
+.|.|+.++|++++++++ .+|+++.. ++...+||+++|+|++++|||.++.++|.||+ .+|+. |++.||+
T Consensus 3 ~tv~~n~~~D~~~~~~~~-~~g~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~~~~vG~-~~g~~i~~~L~~~gv~ 77 (306)
T 2abq_A 3 YTVTLNPSIDYIVQVENF-QQGVVNRSERDRKQPGGKGINVSRVLKRLGHETKALGFLGG-FTGAYVRNALEKEEIG 77 (306)
T ss_dssp EEEESSCEEEEEEECTTC-CSSSEEECSEEEEEEECHHHHHHHHHHHTTCCCEEEEEEEH-HHHHHHHHHHHHTTCE
T ss_pred EEEecCchheEEEEcCCc-ccCCeEEeceeEecCCchHHHHHHHHHHcCCCceEEEEecc-hhHHHHHHHHHHcCCc
Confidence 468899999999999986 66777765 89999999999999999999999999999998 88974 5556765
No 48
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=99.11 E-value=3.7e-11 Score=96.28 Aligned_cols=75 Identities=19% Similarity=0.194 Sum_probs=57.1
Q ss_pred CCcEEEEccccceeeeecCCC------CCCCCc--------------ee-ceeeEecCChHHHHHHHHHHcCCC---cEE
Q 033400 43 AAEPMIIGGMVLDIHATPSIP------ANPRTT--------------TL-GKANYVLGGVARNVAECMSKLGAK---PYM 98 (120)
Q Consensus 43 ~~~VlvvGs~~iDii~~v~~~------p~~g~~--------------~~-~~~~~~~GG~aaNvAvalaRLG~~---v~l 98 (120)
...|+++|+..+|++..++.. ...|.- .. .+....+||+++|+|+++++||.+ +.|
T Consensus 26 ~~~v~giGnalvDi~~~v~d~~l~~~~l~kg~m~l~~~~~~~~~~~~~~~~~~~~~~GGsa~N~a~~la~LG~~~~~~~f 105 (372)
T 3uq6_A 26 EGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCSY 105 (372)
T ss_dssp TTCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTTHHHHHHTSSSCEEEECCHHHHHHHHHHHHHCSTTSEEE
T ss_pred CCeEEEECCceeeEEEEeCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEeCCcHHHHHHHHHHHcCCCCCcEEE
Confidence 346999999999999998831 111110 01 135678999999999999999976 899
Q ss_pred EEeecCChhcc----cHHhcCcc
Q 033400 99 ISALGLDMEIY----CWNTGNLL 117 (120)
Q Consensus 99 vs~VGdD~~G~----~~~~~~~~ 117 (120)
+|+||+|.+|+ .+++.||+
T Consensus 106 iG~VG~D~~G~~l~~~L~~~GV~ 128 (372)
T 3uq6_A 106 VGCIGADIQGKYIKNDCSALDLV 128 (372)
T ss_dssp EEEECSSHHHHHHHHHHHHTTCE
T ss_pred EeeecCCHHHHHHHHHHHHcCCC
Confidence 99999999998 44556764
No 49
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=98.97 E-value=1.3e-09 Score=85.81 Aligned_cols=72 Identities=14% Similarity=0.236 Sum_probs=56.7
Q ss_pred CCCCcEEEEccccceeeeecCCCCCCCCce-eceeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhccc----HHhcC
Q 033400 41 QEAAEPMIIGGMVLDIHATPSIPANPRTTT-LGKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIYC----WNTGN 115 (120)
Q Consensus 41 ~~~~~VlvvGs~~iDii~~v~~~p~~g~~~-~~~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~~----~~~~~ 115 (120)
...++|+++|....++.- +..+... ..++...+||+++|+|++++|||.++.++++||+|.+|+. |++.|
T Consensus 10 ~~~~~~~~~ge~l~~~~~-----~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~i~~~L~~~g 84 (351)
T 2afb_A 10 HHHMKVVTFGEIMLRLSP-----PDHKRIFQTDSFDVTYGGAEANVAAFLAQMGLDAYFVTKLPNNPLGDAAAGHLRKFG 84 (351)
T ss_dssp CCCCEEEEESCCEEEEEC-----STTCCGGGCSEEEEEEECHHHHHHHHHHHTTSEEEEEEEECSSHHHHHHHHHHHHTT
T ss_pred cccceEEEechhhheecC-----CCCccccccceeeEecCChHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHHcC
Confidence 457899999999987542 1111222 3478899999999999999999999999999999999984 45567
Q ss_pred cc
Q 033400 116 LL 117 (120)
Q Consensus 116 ~~ 117 (120)
|+
T Consensus 85 v~ 86 (351)
T 2afb_A 85 VK 86 (351)
T ss_dssp CB
T ss_pred Cc
Confidence 65
No 50
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=98.60 E-value=2.5e-08 Score=77.11 Aligned_cols=62 Identities=21% Similarity=0.186 Sum_probs=45.7
Q ss_pred CcEEEEccccceeeeecCCCCCCCCceeceeeEecCChHHHHHHHHHHcCCCcEEEEeecCChhcc---cHHhcCcc
Q 033400 44 AEPMIIGGMVLDIHATPSIPANPRTTTLGKANYVLGGVARNVAECMSKLGAKPYMISALGLDMEIY---CWNTGNLL 117 (120)
Q Consensus 44 ~~VlvvGs~~iDii~~v~~~p~~g~~~~~~~~~~~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~---~~~~~~~~ 117 (120)
..|.++|....|.+.+. .++...+||+++|+|++++|||.++.++|+||+|. .. .|++.||+
T Consensus 12 ~~~~~~~~~~~~~~~~~-----------~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~-~~~~~~L~~~gVd 76 (298)
T 1vk4_A 12 HMITFIGHVSKDVNVVD-----------GKREIAYGGGVVMGAITSSLLGVKTKVITKCTRED-VSKFSFLRDNGVE 76 (298)
T ss_dssp SEEEEECCCEEEEEEET-----------TEEEEEEECHHHHHHHHHHHTTCEEEEEEEECTTT-GGGGTTTGGGTCE
T ss_pred eeEEEeccccCceEeec-----------CeEEEecCCHHHHHHHHHHHcCCceEEEEEEcCCH-HHHHHHHHHcCCc
Confidence 34555555555444432 35778899999999999999999999999999998 32 45556654
No 51
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=59.93 E-value=7.5 Score=30.05 Aligned_cols=20 Identities=15% Similarity=0.110 Sum_probs=13.8
Q ss_pred HHHHHHHHHHcCCCcEEEEe
Q 033400 82 ARNVAECMSKLGAKPYMISA 101 (120)
Q Consensus 82 aaNvAvalaRLG~~v~lvs~ 101 (120)
|.-.|..|++.|.+|.++=+
T Consensus 35 Gl~~A~~La~~G~~V~v~E~ 54 (407)
T 3rp8_A 35 GLSAAVALKQSGIDCDVYEA 54 (407)
T ss_dssp HHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHhCCCCEEEEeC
Confidence 46667777777777777644
No 52
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=56.42 E-value=6.6 Score=32.43 Aligned_cols=25 Identities=20% Similarity=0.260 Sum_probs=20.1
Q ss_pred cCChHHHHHHHHHHcCCCcEEEEee
Q 033400 78 LGGVARNVAECMSKLGAKPYMISAL 102 (120)
Q Consensus 78 ~GG~aaNvAvalaRLG~~v~lvs~V 102 (120)
.|..|.-.|+.+++.|.+|.++-+-
T Consensus 129 ~G~aGl~aA~~la~~G~~V~vlEk~ 153 (566)
T 1qo8_A 129 AGSAGFNASLAAKKAGANVILVDKA 153 (566)
T ss_dssp CSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 4556788889999999999988653
No 53
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=55.52 E-value=5.1 Score=27.63 Aligned_cols=39 Identities=13% Similarity=0.110 Sum_probs=32.2
Q ss_pred CChHHHHHHHHHHcCCCcEEEEeecCChhcccHHhcCcccc
Q 033400 79 GGVARNVAECMSKLGAKPYMISALGLDMEIYCWNTGNLLAY 119 (120)
Q Consensus 79 GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~~~~~~~~~~~ 119 (120)
+|.+...+..|+..|.++.+++.+|..++ +.|++ ||..|
T Consensus 65 ~g~g~~~~~~L~~~gv~~VI~g~iG~~a~-~~L~~-GI~v~ 103 (136)
T 2re2_A 65 AARGVFMLKSALDHGANALVLSEIGSPGF-NFIKN-KMDVY 103 (136)
T ss_dssp SCHHHHHHHHHHHTTCSEEEESCCBHHHH-HHHTT-TSEEE
T ss_pred CCccHHHHHHHHHcCCCEEEECCCCHhHH-HHHHC-CCEEE
Confidence 57777888889999999999999998877 55777 88765
No 54
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=53.67 E-value=13 Score=29.88 Aligned_cols=21 Identities=14% Similarity=0.113 Sum_probs=18.1
Q ss_pred hHHHHHHHHHHcCCCcEEEEe
Q 033400 81 VARNVAECMSKLGAKPYMISA 101 (120)
Q Consensus 81 ~aaNvAvalaRLG~~v~lvs~ 101 (120)
.|...|..|++.|.+|.++-+
T Consensus 37 aGl~aA~~la~~G~~V~liEk 57 (484)
T 3o0h_A 37 GGVRAARLAGALGKRVAIAEE 57 (484)
T ss_dssp HHHHHHHHHHHTTCCEEEEES
T ss_pred HHHHHHHHHHhCcCEEEEEeC
Confidence 456788889999999999987
No 55
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=53.49 E-value=18 Score=26.20 Aligned_cols=23 Identities=13% Similarity=0.143 Sum_probs=18.4
Q ss_pred CChHHHHHHHHHHcCCCcEE-EEe
Q 033400 79 GGVARNVAECMSKLGAKPYM-ISA 101 (120)
Q Consensus 79 GG~aaNvAvalaRLG~~v~l-vs~ 101 (120)
|-.|...|..|++.|.++.+ +-+
T Consensus 13 G~aGl~aA~~l~~~g~~v~li~e~ 36 (315)
T 3r9u_A 13 GPAGLSAGLYATRGGLKNVVMFEK 36 (315)
T ss_dssp SHHHHHHHHHHHHHTCSCEEEECS
T ss_pred CHHHHHHHHHHHHCCCCeEEEEeC
Confidence 44556788889999999999 766
No 56
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=49.54 E-value=12 Score=29.00 Aligned_cols=20 Identities=25% Similarity=0.414 Sum_probs=17.5
Q ss_pred HHHHHHHHHHcCCCcEEEEe
Q 033400 82 ARNVAECMSKLGAKPYMISA 101 (120)
Q Consensus 82 aaNvAvalaRLG~~v~lvs~ 101 (120)
+.|.|.+|+++|.+|.+|.+
T Consensus 65 avNLA~aLA~~GkkVllID~ 84 (314)
T 3fwy_A 65 SSNLSAAFSILGKRVLQIGC 84 (314)
T ss_dssp HHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHCCCeEEEEec
Confidence 58999999999999888764
No 57
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=40.84 E-value=9.3 Score=31.86 Aligned_cols=29 Identities=21% Similarity=0.274 Sum_probs=26.6
Q ss_pred ecCChHHHHHHHHHHcCCCcEE--EEeecCC
Q 033400 77 VLGGVARNVAECMSKLGAKPYM--ISALGLD 105 (120)
Q Consensus 77 ~~GG~aaNvAvalaRLG~~v~l--vs~VGdD 105 (120)
..||.|..+|..++++|.++.+ ++.+|+.
T Consensus 109 ~~GGnA~imAn~la~lg~~~vl~~~~~l~~~ 139 (455)
T 1ua4_A 109 RMGGQAGIMANLLGGVYGVPVIVHVPQLSRL 139 (455)
T ss_dssp EEESHHHHHHHHHTTTTCCCEEECCSCCCHH
T ss_pred ccCCcHHHHHHHHHHcCCCEEEEeCCCCCHH
Confidence 8999999999999999999998 8888764
No 58
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=40.53 E-value=24 Score=26.27 Aligned_cols=20 Identities=10% Similarity=0.139 Sum_probs=15.7
Q ss_pred hHHHHHHHHHHcCCCcEEEE
Q 033400 81 VARNVAECMSKLGAKPYMIS 100 (120)
Q Consensus 81 ~aaNvAvalaRLG~~v~lvs 100 (120)
.|...|..|++.|.++.++-
T Consensus 25 aGl~aA~~l~~~g~~v~lie 44 (335)
T 2a87_A 25 AGYTAALYAARAQLAPLVFE 44 (335)
T ss_dssp HHHHHHHHHHHTTCCCEEEC
T ss_pred HHHHHHHHHHhCCCeEEEEe
Confidence 34567788889999998886
No 59
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=40.17 E-value=24 Score=28.96 Aligned_cols=24 Identities=29% Similarity=0.346 Sum_probs=19.3
Q ss_pred cCChHHHHHHHHHHcCCCcEEEEe
Q 033400 78 LGGVARNVAECMSKLGAKPYMISA 101 (120)
Q Consensus 78 ~GG~aaNvAvalaRLG~~v~lvs~ 101 (120)
.|..|.-.|+.+++.|.+|.++-+
T Consensus 134 aG~aGl~aA~~la~~G~~V~vlEk 157 (571)
T 1y0p_A 134 SGGAGFSAAISATDSGAKVILIEK 157 (571)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCHHHHHHHHHHHHCCCcEEEEeC
Confidence 456778888889999999888854
No 60
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=39.23 E-value=30 Score=27.43 Aligned_cols=24 Identities=17% Similarity=0.086 Sum_probs=18.0
Q ss_pred cCChHHHHHHHHHHcCCCcEEEEe
Q 033400 78 LGGVARNVAECMSKLGAKPYMISA 101 (120)
Q Consensus 78 ~GG~aaNvAvalaRLG~~v~lvs~ 101 (120)
.|..|.-.|+.+++.|.+|.++-+
T Consensus 34 gG~aGl~aA~~la~~G~~V~llEk 57 (447)
T 2i0z_A 34 GGPSGLMAAIGAAEEGANVLLLDK 57 (447)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CcHHHHHHHHHHHHCCCCEEEEEC
Confidence 344667778888888988888865
No 61
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=37.94 E-value=37 Score=29.38 Aligned_cols=58 Identities=16% Similarity=0.236 Sum_probs=38.8
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCcchhhccccccccCCCCCCcEEEEccccceeeeecCCCCCCCCceeceeeEecCChHH
Q 033400 4 SSVQERLNAVFRHLLQQPCEANPVLHKVALSKLQLQKQEAAEPMIIGGMVLDIHATPSIPANPRTTTLGKANYVLGGVAR 83 (120)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VlvvGs~~iDii~~v~~~p~~g~~~~~~~~~~~GG~aa 83 (120)
.++++||+-+-|+++.+--.. .+ . ..+|+++| .||.|.
T Consensus 303 ~~~~lnL~lmrwrll~~~gq~----------kL--~---~~kVLIVG---------------------------aGGLGs 340 (598)
T 3vh1_A 303 QSVDLNLKLMKWRILPDLNLD----------II--K---NTKVLLLG---------------------------AGTLGC 340 (598)
T ss_dssp HHHHHHHHHHHHHHCTTCCHH----------HH--H---TCEEEEEC---------------------------CSHHHH
T ss_pred HHHhhhhhhhhhhccchhhHH----------HH--h---CCeEEEEC---------------------------CCHHHH
Confidence 356778888888887543110 11 1 45788876 799999
Q ss_pred HHHHHHHHcCCCcEEEEeecCC
Q 033400 84 NVAECMSKLGAKPYMISALGLD 105 (120)
Q Consensus 84 NvAvalaRLG~~v~lvs~VGdD 105 (120)
.+|..|++.|.. -++-|-.|
T Consensus 341 ~va~~La~aGVG--~ItLvD~D 360 (598)
T 3vh1_A 341 YVSRALIAWGVR--KITFVDNG 360 (598)
T ss_dssp HHHHHHHTTTCC--EEEEECCS
T ss_pred HHHHHHHHcCCC--EEEEECCC
Confidence 999999999963 33444333
No 62
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=34.06 E-value=22 Score=26.88 Aligned_cols=28 Identities=14% Similarity=0.221 Sum_probs=24.4
Q ss_pred EecCChHHHHHHHHHHcCCCcEEEEeec
Q 033400 76 YVLGGVARNVAECMSKLGAKPYMISALG 103 (120)
Q Consensus 76 ~~~GG~aaNvAvalaRLG~~v~lvs~VG 103 (120)
.+.|+.|+-.|.++.+.|.+|.+++.-.
T Consensus 26 ~SSG~mG~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 26 HSTGHLGKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCCCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 3478899999999999999999998643
No 63
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=32.97 E-value=49 Score=24.13 Aligned_cols=24 Identities=17% Similarity=0.263 Sum_probs=18.6
Q ss_pred cCChHHHHHHHHHHcCCCcEEEEe
Q 033400 78 LGGVARNVAECMSKLGAKPYMISA 101 (120)
Q Consensus 78 ~GG~aaNvAvalaRLG~~v~lvs~ 101 (120)
.||-|..+|..|++.|.++.+++.
T Consensus 30 s~gIG~~ia~~l~~~G~~V~~~~r 53 (267)
T 1vl8_A 30 SRGLGFGIAQGLAEAGCSVVVASR 53 (267)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeC
Confidence 456688888889999988777654
No 64
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=32.29 E-value=11 Score=24.60 Aligned_cols=40 Identities=15% Similarity=0.243 Sum_probs=29.6
Q ss_pred CChHHHHHHHHHHcCCCcEEEEeecCChhcccHHhcCcccc
Q 033400 79 GGVARNVAECMSKLGAKPYMISALGLDMEIYCWNTGNLLAY 119 (120)
Q Consensus 79 GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~~~~~~~~~~~ 119 (120)
+|.+...+..+...|.++.+++.+|...+. .|++.||..|
T Consensus 48 ~g~g~~~~~~l~~~gv~~vi~~~iG~~a~~-~L~~~GI~v~ 87 (116)
T 1rdu_A 48 HGTGPKVVQSLVSKGVEYLIASNVGRNAFE-TLKAAGVKVY 87 (116)
T ss_dssp CCSSCSHHHHHHTTTCCEEECSSCCSSCHH-HHHTTTCEEE
T ss_pred CCccHHHHHHHHHcCCCEEEECCCCHhHHH-HHHHCCCEEE
Confidence 344446677788889999999999987664 4777777654
No 65
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=32.09 E-value=22 Score=29.85 Aligned_cols=31 Identities=23% Similarity=0.198 Sum_probs=25.8
Q ss_pred eEecCChHHHHHHHHHHcCC-CcEEEEeecCC
Q 033400 75 NYVLGGVARNVAECMSKLGA-KPYMISALGLD 105 (120)
Q Consensus 75 ~~~~GG~aaNvAvalaRLG~-~v~lvs~VGdD 105 (120)
....||.|.-+|..|+++|. ++.+.++++..
T Consensus 113 ~~~~GGnA~imAn~La~lg~~~Vi~~~p~~sk 144 (474)
T 3drw_A 113 EERLGGQAGIIANTLAGLKIRKVIAYTPFLPK 144 (474)
T ss_dssp EEEEESHHHHHHHHHHHTTCSEEEECCSCCCH
T ss_pred eEecCChHHHHHHHHHHcCCCcEEEecCcCCH
Confidence 46899999999999999999 47777776643
No 66
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=31.46 E-value=21 Score=29.91 Aligned_cols=28 Identities=18% Similarity=0.198 Sum_probs=25.0
Q ss_pred ecCChHHHHHHHHHHcCCCcEE--EEeecC
Q 033400 77 VLGGVARNVAECMSKLGAKPYM--ISALGL 104 (120)
Q Consensus 77 ~~GG~aaNvAvalaRLG~~v~l--vs~VGd 104 (120)
..||.|.-+|..++++|.++.+ ++.+|.
T Consensus 117 ~mGGnAgimAn~la~lg~~~vl~~~~~~s~ 146 (467)
T 1gc5_A 117 RIGGQAGIMANLLGGVYRIPTIVHVPQNPK 146 (467)
T ss_dssp EEESHHHHHHHHHHHTSCCCEEECCSCCCH
T ss_pred ccCccHHHHHHHHHhcCCCEEEEcCCCCCH
Confidence 9999999999999999999988 666664
No 67
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=30.96 E-value=36 Score=24.63 Aligned_cols=26 Identities=27% Similarity=0.515 Sum_probs=20.7
Q ss_pred EecCChH-----HHHHHHHHHcCCCcEEEEe
Q 033400 76 YVLGGVA-----RNVAECMSKLGAKPYMISA 101 (120)
Q Consensus 76 ~~~GG~a-----aNvAvalaRLG~~v~lvs~ 101 (120)
..-||+| .|.|..+++.|.+|.+|-.
T Consensus 13 s~kGGvGKTt~a~~LA~~la~~g~~VlliD~ 43 (257)
T 1wcv_1 13 NQKGGVGKTTTAINLAAYLARLGKRVLLVDL 43 (257)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred eCCCCchHHHHHHHHHHHHHHCCCCEEEEEC
Confidence 3456754 8999999999999998753
No 68
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=30.73 E-value=68 Score=28.08 Aligned_cols=21 Identities=14% Similarity=0.197 Sum_probs=13.8
Q ss_pred ChHHHHHHHHHHcCCCcEEEE
Q 033400 80 GVARNVAECMSKLGAKPYMIS 100 (120)
Q Consensus 80 G~aaNvAvalaRLG~~v~lvs 100 (120)
-.|...|..|++.|.+|.++=
T Consensus 346 ~~Gl~aA~~l~~~g~~v~v~E 366 (776)
T 4gut_A 346 PAGLAAARQLHNFGIKVTVLE 366 (776)
T ss_dssp HHHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHHHHCCCcEEEEe
Confidence 345566777777777776663
No 69
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=30.52 E-value=14 Score=24.29 Aligned_cols=41 Identities=17% Similarity=0.164 Sum_probs=30.5
Q ss_pred cCChHHHHHHHHHHcCCCcEEEEeecCChhcccHHhcCcccc
Q 033400 78 LGGVARNVAECMSKLGAKPYMISALGLDMEIYCWNTGNLLAY 119 (120)
Q Consensus 78 ~GG~aaNvAvalaRLG~~v~lvs~VGdD~~G~~~~~~~~~~~ 119 (120)
.+|.+...+..|...|.++.+++.+|...+ +.+++.||.-|
T Consensus 52 ~~g~g~~~~~~l~~~gv~~vi~~~iG~~a~-~~L~~~GI~v~ 92 (120)
T 2wfb_A 52 SHGAGINAAQVLAKSGAGVLLTGYVGPKAF-QALQAAGIKVG 92 (120)
T ss_dssp SSCHHHHHHHHHHHHTEEEEECSCCCHHHH-HHHHHTTCEEE
T ss_pred CCCchHHHHHHHHHCCCCEEEECCCCHhHH-HHHHHCCCEEE
Confidence 356666677778888999999999987655 44777777654
No 70
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=29.89 E-value=51 Score=24.35 Aligned_cols=24 Identities=17% Similarity=0.187 Sum_probs=19.8
Q ss_pred cCChHHHHHHHHHHcCCCcEEEEe
Q 033400 78 LGGVARNVAECMSKLGAKPYMISA 101 (120)
Q Consensus 78 ~GG~aaNvAvalaRLG~~v~lvs~ 101 (120)
.||-|..+|..+++.|.++.+++.
T Consensus 38 s~gIG~aia~~la~~G~~V~~~~r 61 (277)
T 3gvc_A 38 GAGIGLAVARRLADEGCHVLCADI 61 (277)
T ss_dssp TSTHHHHHHHHHHHTTCEEEEEES
T ss_pred CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 467889999999999998877654
No 71
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=28.54 E-value=14 Score=24.50 Aligned_cols=39 Identities=21% Similarity=0.234 Sum_probs=25.7
Q ss_pred ChHHHHHHHHHHcCCCcEEEEeecCChhcccHHhcCcccc
Q 033400 80 GVARNVAECMSKLGAKPYMISALGLDMEIYCWNTGNLLAY 119 (120)
Q Consensus 80 G~aaNvAvalaRLG~~v~lvs~VGdD~~G~~~~~~~~~~~ 119 (120)
|.+...+-.|...|.++.+++.+|...+. .|.+.||..|
T Consensus 52 g~g~~~~~~l~~~gv~~vi~~~iG~~a~~-~L~~~GI~v~ 90 (124)
T 1eo1_A 52 GAGIRTAQIIANNGVKAVIASSPGPNAFE-VLNELGIKIY 90 (124)
T ss_dssp SCSTTHHHHHHHTTCCEEEECCSSHHHHH-HHHHHTCEEE
T ss_pred CCCHHHHHHHHHCCCCEEEECCcCHHHHH-HHHHCCCEEE
Confidence 33345666677788888888888776543 4666666544
No 72
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=28.01 E-value=43 Score=21.99 Aligned_cols=21 Identities=10% Similarity=0.222 Sum_probs=17.5
Q ss_pred hHHHHHHHHHHcCCCcEEEEe
Q 033400 81 VARNVAECMSKLGAKPYMISA 101 (120)
Q Consensus 81 ~aaNvAvalaRLG~~v~lvs~ 101 (120)
+|.-.|..|+|.|++|.++=+
T Consensus 13 aGL~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 13 AGLSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp HHHHHHHHHHHTTCCEEEECS
T ss_pred HHHHHHHHHHHCCCCEEEEEC
Confidence 467788899999999999853
No 73
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=27.19 E-value=16 Score=24.04 Aligned_cols=35 Identities=14% Similarity=0.190 Sum_probs=26.5
Q ss_pred HHHHHHHHcCCCcEEEEeecCChhcccHHhcCcccc
Q 033400 84 NVAECMSKLGAKPYMISALGLDMEIYCWNTGNLLAY 119 (120)
Q Consensus 84 NvAvalaRLG~~v~lvs~VGdD~~G~~~~~~~~~~~ 119 (120)
..+-.|...|.++.+++.+|...+ +.|++.||.-|
T Consensus 54 ~~~~~L~~~gv~~vi~~~iG~~a~-~~L~~~GI~v~ 88 (121)
T 2yx6_A 54 DLPNFIKDHGAKIVLTYGIGRRAI-EYFNSLGISVV 88 (121)
T ss_dssp HHHHHHHHTTCCEEECSBCCHHHH-HHHHHTTCEEE
T ss_pred HHHHHHHHcCCCEEEECCCCHhHH-HHHHHCCCEEE
Confidence 667778888999999999987655 44677777654
No 74
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=26.57 E-value=44 Score=25.47 Aligned_cols=28 Identities=32% Similarity=0.297 Sum_probs=22.2
Q ss_pred eeEecCCh-----HHHHHHHHHHcCCCcEEEEe
Q 033400 74 ANYVLGGV-----ARNVAECMSKLGAKPYMISA 101 (120)
Q Consensus 74 ~~~~~GG~-----aaNvAvalaRLG~~v~lvs~ 101 (120)
+...-||+ ++|.|.++++.|.+|.+|..
T Consensus 18 v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~ 50 (324)
T 3zq6_A 18 FIGGKGGVGKTTISAATALWMARSGKKTLVIST 50 (324)
T ss_dssp EEEESTTSSHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred EEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeC
Confidence 44445664 58999999999999999875
No 75
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=25.50 E-value=39 Score=25.34 Aligned_cols=26 Identities=19% Similarity=0.263 Sum_probs=22.8
Q ss_pred EecCChHHHHHHHHHHcCCCcEEEEe
Q 033400 76 YVLGGVARNVAECMSKLGAKPYMISA 101 (120)
Q Consensus 76 ~~~GG~aaNvAvalaRLG~~v~lvs~ 101 (120)
.+.||.|.-.|..+++.|.+|.+++.
T Consensus 31 ~SSg~iG~aiA~~~~~~Ga~V~l~~~ 56 (226)
T 1u7z_A 31 HSSGKMGFAIAAAAARRGANVTLVSG 56 (226)
T ss_dssp CCCSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCccHHHHHHHHHHHHCCCEEEEEEC
Confidence 34789999999999999999999853
No 76
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=25.49 E-value=23 Score=29.57 Aligned_cols=28 Identities=18% Similarity=0.292 Sum_probs=25.0
Q ss_pred ecCChHHHHHHHHHHcCCCcEE--EEeecC
Q 033400 77 VLGGVARNVAECMSKLGAKPYM--ISALGL 104 (120)
Q Consensus 77 ~~GG~aaNvAvalaRLG~~v~l--vs~VGd 104 (120)
..||.|.-+|..++++|.++.+ ++.+|+
T Consensus 112 ~mGGnA~imAn~la~lg~~~vl~~~~~~s~ 141 (457)
T 1l2l_A 112 RMGGQVGIMANLLGGVYGIPVIAHVPQLSE 141 (457)
T ss_dssp EEESHHHHHHHHHTTTSCCCEEECCSSCCH
T ss_pred ccCchHHHHHHHHHHcCCCEEEEcCCCCCH
Confidence 8999999999999999999988 666665
No 77
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=24.58 E-value=37 Score=23.71 Aligned_cols=24 Identities=25% Similarity=0.347 Sum_probs=19.9
Q ss_pred cCChH-----HHHHHHHHHcCCCcEEEEe
Q 033400 78 LGGVA-----RNVAECMSKLGAKPYMISA 101 (120)
Q Consensus 78 ~GG~a-----aNvAvalaRLG~~v~lvs~ 101 (120)
-||+| +|.|..+++.|.+|.+|-.
T Consensus 8 kGGvGKTt~a~~LA~~la~~g~~VlliD~ 36 (254)
T 3kjh_A 8 KGGVGKTTVAAGLIKIMASDYDKIYAVDG 36 (254)
T ss_dssp SSSHHHHHHHHHHHHHHTTTCSCEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 56654 8999999999999988864
No 78
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=24.55 E-value=45 Score=25.62 Aligned_cols=21 Identities=29% Similarity=0.294 Sum_probs=18.2
Q ss_pred hHHHHHHHHHHcCCCcEEEEe
Q 033400 81 VARNVAECMSKLGAKPYMISA 101 (120)
Q Consensus 81 ~aaNvAvalaRLG~~v~lvs~ 101 (120)
.++|.|.++++.|.+|.++..
T Consensus 35 va~~LA~~lA~~G~rVllvD~ 55 (329)
T 2woo_A 35 TSCSLAIQMSKVRSSVLLIST 55 (329)
T ss_dssp HHHHHHHHHHTSSSCEEEEEC
T ss_pred HHHHHHHHHHHCCCeEEEEEC
Confidence 468999999999999999864
No 79
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A*
Probab=24.44 E-value=42 Score=26.23 Aligned_cols=28 Identities=21% Similarity=0.126 Sum_probs=22.4
Q ss_pred eeEecCC-----hHHHHHHHHH--HcCCCcEEEEe
Q 033400 74 ANYVLGG-----VARNVAECMS--KLGAKPYMISA 101 (120)
Q Consensus 74 ~~~~~GG-----~aaNvAvala--RLG~~v~lvs~ 101 (120)
+...-|| .++|.|++++ +.|.+|.+|..
T Consensus 22 v~sgKGGvGKTTvaanLA~~lA~~~~G~rVLLvD~ 56 (354)
T 2woj_A 22 FVGGKGGVGKTTSSCSIAIQMALSQPNKQFLLIST 56 (354)
T ss_dssp EEEESTTSSHHHHHHHHHHHHHHHCTTSCEEEEEC
T ss_pred EEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEEC
Confidence 4444566 4689999999 99999999876
No 80
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=23.89 E-value=52 Score=25.53 Aligned_cols=20 Identities=15% Similarity=0.258 Sum_probs=18.0
Q ss_pred HHHHHHHHHHcCCCcEEEEe
Q 033400 82 ARNVAECMSKLGAKPYMISA 101 (120)
Q Consensus 82 aaNvAvalaRLG~~v~lvs~ 101 (120)
++|.|..+++.|.+|.+|..
T Consensus 43 A~~LA~~lA~~G~rVLlvD~ 62 (349)
T 3ug7_A 43 SAATGVYLAEKGLKVVIVST 62 (349)
T ss_dssp HHHHHHHHHHSSCCEEEEEC
T ss_pred HHHHHHHHHHCCCeEEEEeC
Confidence 68999999999999999884
No 81
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=23.67 E-value=1.2e+02 Score=22.31 Aligned_cols=22 Identities=18% Similarity=0.238 Sum_probs=18.7
Q ss_pred ChHHHHHHHHHHcCCCcEEEEe
Q 033400 80 GVARNVAECMSKLGAKPYMISA 101 (120)
Q Consensus 80 G~aaNvAvalaRLG~~v~lvs~ 101 (120)
|-|..+|..+++.|.++.+++.
T Consensus 43 GIG~~ia~~la~~G~~V~~~~r 64 (296)
T 3k31_A 43 SLAWGIAKAVCAQGAEVALTYL 64 (296)
T ss_dssp SHHHHHHHHHHHTTCEEEEEES
T ss_pred CHHHHHHHHHHHCCCEEEEEeC
Confidence 7788999999999999877764
No 82
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=23.33 E-value=43 Score=27.99 Aligned_cols=27 Identities=22% Similarity=0.236 Sum_probs=22.4
Q ss_pred EecCChHHHHHHHHHHcCCCcEEEEee
Q 033400 76 YVLGGVARNVAECMSKLGAKPYMISAL 102 (120)
Q Consensus 76 ~~~GG~aaNvAvalaRLG~~v~lvs~V 102 (120)
.-.|..|.-.|+.+++.|.+|.++.+-
T Consensus 13 VGaG~AGl~AA~~la~~G~~V~vlEK~ 39 (588)
T 2wdq_A 13 IGAGGAGMRAALQISQSGQTCALLSKV 39 (588)
T ss_dssp ECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred ECcCHHHHHHHHHHHHCCCcEEEEecC
Confidence 335667888999999999999999884
No 83
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=23.30 E-value=53 Score=24.34 Aligned_cols=25 Identities=28% Similarity=0.477 Sum_probs=20.9
Q ss_pred ecCCh-----HHHHHHHHHHcCCCcEEEEe
Q 033400 77 VLGGV-----ARNVAECMSKLGAKPYMISA 101 (120)
Q Consensus 77 ~~GG~-----aaNvAvalaRLG~~v~lvs~ 101 (120)
.-||+ ++|.|.++++.|.+|.+|-.
T Consensus 48 ~KGGvGKTT~a~nLA~~La~~G~~VlliD~ 77 (307)
T 3end_A 48 GKGGIGKSTTSSNLSAAFSILGKRVLQIGC 77 (307)
T ss_dssp CSTTSSHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCccHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 46775 48999999999999999865
No 84
>2yru_A Steroid receptor RNA activator 1; SRAP, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=23.23 E-value=46 Score=22.69 Aligned_cols=18 Identities=11% Similarity=0.106 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHhhcCCC
Q 033400 5 SVQERLNAVFRHLLQQPC 22 (120)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~ 22 (120)
.+.+||+.+|+||-.+.-
T Consensus 40 D~~KRL~~LfdkLn~~~L 57 (118)
T 2yru_A 40 DISRRLALLREQWAGGKL 57 (118)
T ss_dssp HHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHhcCCC
Confidence 578999999999988763
No 85
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=23.16 E-value=43 Score=28.45 Aligned_cols=28 Identities=21% Similarity=0.192 Sum_probs=23.2
Q ss_pred eEecCChHHHHHHHHHHcCCCcEEEEee
Q 033400 75 NYVLGGVARNVAECMSKLGAKPYMISAL 102 (120)
Q Consensus 75 ~~~~GG~aaNvAvalaRLG~~v~lvs~V 102 (120)
..-.|+.|.-.|+.+++.|.+|.++.+.
T Consensus 23 VVG~G~AGl~AAl~aa~~G~~V~vlEK~ 50 (621)
T 2h88_A 23 VVGAGGAGLRAAFGLSEAGFNTACVTKL 50 (621)
T ss_dssp EECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EECccHHHHHHHHHHHHCCCcEEEEecc
Confidence 3446778888999999999999999884
No 86
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=23.08 E-value=63 Score=23.92 Aligned_cols=25 Identities=20% Similarity=0.191 Sum_probs=17.6
Q ss_pred cCChHHHHHHHHHHcCCCcEEEEee
Q 033400 78 LGGVARNVAECMSKLGAKPYMISAL 102 (120)
Q Consensus 78 ~GG~aaNvAvalaRLG~~v~lvs~V 102 (120)
.|+.|..++..|.+.|.++..+..-
T Consensus 34 tG~iG~~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 34 AGFIGSNLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3566777777787778777766653
No 87
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=23.04 E-value=1e+02 Score=25.72 Aligned_cols=28 Identities=11% Similarity=0.179 Sum_probs=19.8
Q ss_pred eeEecCC-hHHHHHHHHHHcCCCcEEEEe
Q 033400 74 ANYVLGG-VARNVAECMSKLGAKPYMISA 101 (120)
Q Consensus 74 ~~~~~GG-~aaNvAvalaRLG~~v~lvs~ 101 (120)
+.+.-|| .|.-.|..|++.|.++.++-+
T Consensus 110 VVIVGgGpaGL~aA~~La~~G~kV~VlEr 138 (549)
T 3nlc_A 110 PIVIGFGPCGLFAGLVLAQMGFNPIIVER 138 (549)
T ss_dssp CEEECCSHHHHHHHHHHHHTTCCCEEECS
T ss_pred EEEECcCHHHHHHHHHHHHCCCeEEEEEc
Confidence 3333344 456678889999999999854
No 88
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=22.40 E-value=57 Score=23.91 Aligned_cols=21 Identities=14% Similarity=0.479 Sum_probs=17.8
Q ss_pred hHHHHHHHHHHcCCCcEEEEe
Q 033400 81 VARNVAECMSKLGAKPYMISA 101 (120)
Q Consensus 81 ~aaNvAvalaRLG~~v~lvs~ 101 (120)
.+.|.|.++++.|.+|.+|-.
T Consensus 18 ~a~nLA~~La~~G~rVlliD~ 38 (289)
T 2afh_E 18 TTQNLVAALAEMGKKVMIVGC 38 (289)
T ss_dssp HHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHCCCeEEEEec
Confidence 357999999999999988754
No 89
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=21.79 E-value=55 Score=23.48 Aligned_cols=20 Identities=10% Similarity=0.345 Sum_probs=17.4
Q ss_pred HHHHHHHHHHcCCCcEEEEe
Q 033400 82 ARNVAECMSKLGAKPYMISA 101 (120)
Q Consensus 82 aaNvAvalaRLG~~v~lvs~ 101 (120)
+.|.|..+++.|.+|.+|-.
T Consensus 18 a~nLA~~la~~G~~VlliD~ 37 (269)
T 1cp2_A 18 TQNLTSGLHAMGKTIMVVGC 37 (269)
T ss_dssp HHHHHHHHHTTTCCEEEEEE
T ss_pred HHHHHHHHHHCCCcEEEEcC
Confidence 57999999999999988754
No 90
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=21.69 E-value=62 Score=22.90 Aligned_cols=20 Identities=20% Similarity=0.320 Sum_probs=17.3
Q ss_pred HHHHHHHHHHcCCCcEEEEe
Q 033400 82 ARNVAECMSKLGAKPYMISA 101 (120)
Q Consensus 82 aaNvAvalaRLG~~v~lvs~ 101 (120)
++|.|..+++.|.+|.+|-.
T Consensus 20 a~~LA~~la~~g~~VlliD~ 39 (260)
T 3q9l_A 20 SAAIATGLAQKGKKTVVIDF 39 (260)
T ss_dssp HHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHhCCCcEEEEEC
Confidence 58999999999999988764
No 91
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=21.42 E-value=62 Score=23.44 Aligned_cols=26 Identities=23% Similarity=0.213 Sum_probs=20.0
Q ss_pred eEecCCh-----HHHHHHHHHHcCCCcEEEE
Q 033400 75 NYVLGGV-----ARNVAECMSKLGAKPYMIS 100 (120)
Q Consensus 75 ~~~~GG~-----aaNvAvalaRLG~~v~lvs 100 (120)
...-||+ ++|.|.++++.|.+|.+|-
T Consensus 24 ~s~kGGvGKTT~a~nLA~~la~~G~~VlliD 54 (262)
T 2ph1_A 24 MSGKGGVGKSTVTALLAVHYARQGKKVGILD 54 (262)
T ss_dssp ECSSSCTTHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EcCCCCCCHHHHHHHHHHHHHHCCCeEEEEe
Confidence 3345664 4899999999999988865
No 92
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=21.09 E-value=67 Score=21.75 Aligned_cols=20 Identities=20% Similarity=0.321 Sum_probs=17.5
Q ss_pred HHHHHHHHHHcCCCcEEEEe
Q 033400 82 ARNVAECMSKLGAKPYMISA 101 (120)
Q Consensus 82 aaNvAvalaRLG~~v~lvs~ 101 (120)
+.|.|..+++.|.+|.++-.
T Consensus 19 a~~la~~la~~g~~vlliD~ 38 (206)
T 4dzz_A 19 VINIATALSRSGYNIAVVDT 38 (206)
T ss_dssp HHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHHCCCeEEEEEC
Confidence 48999999999999988864
No 93
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=20.84 E-value=49 Score=24.44 Aligned_cols=19 Identities=21% Similarity=0.431 Sum_probs=17.0
Q ss_pred EecCChHHHHHHHHHHcCC
Q 033400 76 YVLGGVARNVAECMSKLGA 94 (120)
Q Consensus 76 ~~~GG~aaNvAvalaRLG~ 94 (120)
.-.||.|..+|..|++.|.
T Consensus 37 vG~Gg~G~~va~~La~~Gv 55 (249)
T 1jw9_B 37 VGLGGLGCAASQYLASAGV 55 (249)
T ss_dssp ECCSHHHHHHHHHHHHHTC
T ss_pred EeeCHHHHHHHHHHHHcCC
Confidence 3479999999999999997
No 94
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=20.79 E-value=1.4e+02 Score=22.07 Aligned_cols=22 Identities=18% Similarity=0.238 Sum_probs=17.8
Q ss_pred ChHHHHHHHHHHcCCCcEEEEe
Q 033400 80 GVARNVAECMSKLGAKPYMISA 101 (120)
Q Consensus 80 G~aaNvAvalaRLG~~v~lvs~ 101 (120)
|-|..+|..+++.|.++.+++.
T Consensus 44 GIG~aia~~la~~G~~V~~~~r 65 (293)
T 3grk_A 44 SIAWGIAKAAREAGAELAFTYQ 65 (293)
T ss_dssp SHHHHHHHHHHHTTCEEEEEEC
T ss_pred cHHHHHHHHHHHCCCEEEEEcC
Confidence 3788999999999998776643
No 95
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=20.66 E-value=65 Score=24.00 Aligned_cols=21 Identities=24% Similarity=0.430 Sum_probs=18.1
Q ss_pred hHHHHHHHHHHcCCCcEEEEe
Q 033400 81 VARNVAECMSKLGAKPYMISA 101 (120)
Q Consensus 81 ~aaNvAvalaRLG~~v~lvs~ 101 (120)
.++|.|..+++.|.+|.+|-.
T Consensus 99 ~a~nLA~~lA~~G~rVLLID~ 119 (271)
T 3bfv_A 99 IAANLAVAYAQAGYKTLIVDG 119 (271)
T ss_dssp HHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHHhCCCeEEEEeC
Confidence 458999999999999998854
No 96
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=20.49 E-value=1.2e+02 Score=21.79 Aligned_cols=26 Identities=23% Similarity=0.296 Sum_probs=18.9
Q ss_pred EecCCh-HHHHHHHHHHcCCCcEEEEe
Q 033400 76 YVLGGV-ARNVAECMSKLGAKPYMISA 101 (120)
Q Consensus 76 ~~~GG~-aaNvAvalaRLG~~v~lvs~ 101 (120)
..-||. |...|..++|+|.++.++-+
T Consensus 9 IIG~GpAGl~AA~~la~~g~~v~liE~ 35 (314)
T 4a5l_A 9 IIGSGPAAHTAAIYLGRSSLKPVMYEG 35 (314)
T ss_dssp EECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred EECCCHHHHHHHHHHHHCCCCEEEEec
Confidence 344553 45678889999999998853
No 97
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=20.20 E-value=83 Score=25.42 Aligned_cols=21 Identities=10% Similarity=0.039 Sum_probs=13.0
Q ss_pred hHHHHHHHHHHcCCCcEEEEe
Q 033400 81 VARNVAECMSKLGAKPYMISA 101 (120)
Q Consensus 81 ~aaNvAvalaRLG~~v~lvs~ 101 (120)
.|.-.|+.|++.|.++.++=+
T Consensus 23 aGl~~A~~La~~G~~v~vlE~ 43 (499)
T 2qa2_A 23 AGLMLAGELRLGGVDVMVLEQ 43 (499)
T ss_dssp HHHHHHHHHHHTTCCEEEEES
T ss_pred HHHHHHHHHHHCCCCEEEEEC
Confidence 345566666677777666654
No 98
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=20.12 E-value=70 Score=22.29 Aligned_cols=20 Identities=15% Similarity=0.295 Sum_probs=17.8
Q ss_pred HHHHHHHHHHcCCCcEEEEe
Q 033400 82 ARNVAECMSKLGAKPYMISA 101 (120)
Q Consensus 82 aaNvAvalaRLG~~v~lvs~ 101 (120)
++|.|..+++.|.+|.++-.
T Consensus 20 a~~LA~~la~~g~~VlliD~ 39 (237)
T 1g3q_A 20 TANLSVALGDRGRKVLAVDG 39 (237)
T ss_dssp HHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHhcCCeEEEEeC
Confidence 58999999999999999865
No 99
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=20.00 E-value=72 Score=22.08 Aligned_cols=23 Identities=4% Similarity=0.043 Sum_probs=18.6
Q ss_pred hHHHHHHHHHHcCCCcEEEEeec
Q 033400 81 VARNVAECMSKLGAKPYMISALG 103 (120)
Q Consensus 81 ~aaNvAvalaRLG~~v~lvs~VG 103 (120)
.+.|.|.++++.|.+|.++-..+
T Consensus 18 ~a~nLa~~la~~G~rVll~dp~~ 40 (224)
T 1byi_A 18 ASCALLQAAKAAGYRTAGYKPVA 40 (224)
T ss_dssp HHHHHHHHHHHTTCCEEEECSEE
T ss_pred HHHHHHHHHHHCCCCEEEEccee
Confidence 36899999999999999975433
Done!