Query 033404
Match_columns 120
No_of_seqs 110 out of 1014
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 22:37:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033404.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033404hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ljo_A Non-specific lipid-tran 99.7 5.7E-19 2E-23 115.8 1.8 81 31-118 2-92 (93)
2 2rkn_A DIR1 protein, AT5G48485 99.7 1.4E-18 4.8E-23 110.1 2.4 72 31-110 3-75 (77)
3 1afh_A Maize nonspecific lipid 99.7 1.9E-18 6.3E-23 113.2 2.2 79 31-117 2-92 (93)
4 1siy_A LTP 1, NS-LTP1, nonspec 99.7 2.8E-18 9.7E-23 111.9 3.0 77 32-117 2-90 (91)
5 1t12_A LTP 1, nonspecific lipi 99.7 2.9E-18 9.7E-23 112.0 2.4 77 31-117 2-90 (91)
6 2alg_A Non-specific lipid tran 99.7 2.7E-18 9.2E-23 112.2 1.0 77 31-116 2-90 (92)
7 1bwo_A NS-LTP1, nonspecific li 99.7 3.1E-18 1.1E-22 111.6 1.2 73 40-116 5-89 (90)
8 1n89_A Lipid transfer protein; 99.6 2.9E-16 1E-20 97.0 2.6 62 42-109 4-65 (67)
9 1l6h_A LTP2, non-specific lipi 99.6 2.4E-16 8.1E-21 98.0 1.4 62 42-109 5-66 (69)
10 1hyp_A Hydrophobic protein fro 96.9 0.00027 9.1E-09 44.5 1.4 68 44-116 10-79 (80)
11 3ob4_A Conglutin, maltose ABC 95.0 0.0028 9.6E-08 50.8 -1.0 52 61-115 429-489 (500)
12 2lvf_A 2S albumin; allergen, c 93.7 0.017 5.9E-07 38.4 0.8 61 44-107 17-101 (114)
13 1hss_A 0.19 alpha-amylase inhi 93.4 0.0036 1.2E-07 42.4 -3.0 67 43-112 15-108 (124)
14 1s6d_A Albumin 8; all helix, f 92.0 0.076 2.6E-06 34.6 2.1 60 45-107 21-97 (103)
15 1pnb_B Napin BNIB; napin IA an 89.1 0.082 2.8E-06 32.5 0.2 54 58-116 9-72 (75)
16 1bea_A Bifunctional amylase/se 88.1 0.28 9.5E-06 33.2 2.4 71 43-116 15-117 (127)
17 2ds2_B Sweet protein mabinlin- 88.1 0.12 4E-06 31.6 0.4 45 61-108 8-63 (72)
18 1b1u_A Protein (alpha-amylase/ 86.5 0.15 5.1E-06 34.3 0.3 67 43-112 15-111 (122)
19 1psy_A 2S albumin, RICC3; albu 84.2 0.26 8.9E-06 33.1 0.6 61 43-106 25-116 (125)
20 1w2q_A Conglutin, ARA H 6; all 81.8 0.44 1.5E-05 32.1 1.0 64 43-107 23-112 (127)
21 1sm7_A Recombinant IB pronapin 76.6 0.39 1.3E-05 31.3 -0.6 67 44-115 14-105 (109)
No 1
>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}
Probab=99.73 E-value=5.7e-19 Score=115.79 Aligned_cols=81 Identities=25% Similarity=0.611 Sum_probs=65.9
Q ss_pred CCCCCCchhhhhhchhccHHHhhCCCCCCChhhHHHHHhhhcc-----CCcccceeccccchhhc-CCCHHHHhhchhcc
Q 033404 31 GECGRTPIRSAAASLTPCLGAARNGRAKPPPICCSKLGALIRT-----APRCLCAVLLSPLAKQA-GIKPAIAISIPKRC 104 (120)
Q Consensus 31 ~~C~~~~~~~~~~~l~pC~~yv~~~~~~Ps~~CC~~vk~l~~~-----~~~ClC~~i~~~~~~~~-~in~~~a~~LP~~C 104 (120)
.+|+ ++...|.||++|+++++ .|+..||+++|+|++. +..|+|+-+ ++....+ +||.+||.+||++|
T Consensus 2 isC~-----~v~~~L~pCl~Yv~g~~-~p~~~CC~gv~~l~~~a~t~~dr~~~C~cl-k~~a~~~~~in~~~a~~LP~~C 74 (93)
T 2ljo_A 2 ISCG-----AVTSDLSPCLTYLTGGP-GPSPQCCGGVKKLLAAANTTPDRQAACNCL-KSAAGSITKLNTNNAAALPGKC 74 (93)
T ss_dssp CSSH-----HHHHHHHHHHHHHTTSS-CCCHHHHHHHHHHHHSCCSHHHHHHHHHHH-HHHGGGCTTCCHHHHHHHHHHH
T ss_pred CCHH-----HHHHHHHhHHHHHcCCC-CCCCchhhHHHHHHHHhcCcccHHHHHHhH-HhhhhccCCcCHHHHHhhhHhc
Confidence 5788 89999999999999875 6999999999999764 345777665 4444444 79999999999999
Q ss_pred CCCCC----CCCCCCCcc
Q 033404 105 NLRRP----VGKKCERYT 118 (120)
Q Consensus 105 g~~~p----~~~~C~~~~ 118 (120)
|++.| +.++|+...
T Consensus 75 gV~~p~~Is~~~dC~~v~ 92 (93)
T 2ljo_A 75 GVNIPYKISTTTNCNTVK 92 (93)
T ss_dssp TCCCSSCCSTTCCGGGCC
T ss_pred CCCCCCCCCCCCCCCCCC
Confidence 99866 578898654
No 2
>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}
Probab=99.72 E-value=1.4e-18 Score=110.06 Aligned_cols=72 Identities=29% Similarity=0.619 Sum_probs=62.0
Q ss_pred CCCCCCchhhhhhchhccHHHhhCC-CCCCChhhHHHHHhhhccCCcccceeccccchhhcCCCHHHHhhchhccCCCCC
Q 033404 31 GECGRTPIRSAAASLTPCLGAARNG-RAKPPPICCSKLGALIRTAPRCLCAVLLSPLAKQAGIKPAIAISIPKRCNLRRP 109 (120)
Q Consensus 31 ~~C~~~~~~~~~~~l~pC~~yv~~~-~~~Ps~~CC~~vk~l~~~~~~ClC~~i~~~~~~~~~in~~~a~~LP~~Cg~~~p 109 (120)
.+|+ ++...|.||++|++++ ...||++||++||+ .+..|||.++.++..+.+|||.++|.+||++||+++|
T Consensus 3 ~~C~-----~~~~~L~pC~~yv~~~~~~~Ps~~CC~~lk~---~~~~ClC~~~~~~~~~~~gin~~~A~~LP~~Cgv~~p 74 (77)
T 2rkn_A 3 DLCG-----MSQDELNECKPAVSKENPTSPSQPCCTALQH---ADFACLCGYKNSPWLGSFGVDPELASALPKQCGLANA 74 (77)
T ss_dssp CBTT-----BCHHHHHHHGGGGBSSSCCCCCHHHHHHHTT---CCHHHHHTTTTCHHHHHHTBCHHHHHHHHHHTTCSCC
T ss_pred chHH-----hHHHhHhhCHHHHcCCCCCCCCHHHHHHHHh---cCcCCcCcccCCcchhhcCcCHHHHHHHHHHcCCCCC
Confidence 5788 7888999999999974 45899999999997 4679999888665566679999999999999999977
Q ss_pred C
Q 033404 110 V 110 (120)
Q Consensus 110 ~ 110 (120)
.
T Consensus 75 ~ 75 (77)
T 2rkn_A 75 P 75 (77)
T ss_dssp C
T ss_pred C
Confidence 4
No 3
>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*
Probab=99.71 E-value=1.9e-18 Score=113.23 Aligned_cols=79 Identities=32% Similarity=0.685 Sum_probs=64.7
Q ss_pred CCCCCCchhhhhhchhccHHHhhCCCCCCChhhHHHHHhhhc-------cCCcccceeccccchhhc-CCCHHHHhhchh
Q 033404 31 GECGRTPIRSAAASLTPCLGAARNGRAKPPPICCSKLGALIR-------TAPRCLCAVLLSPLAKQA-GIKPAIAISIPK 102 (120)
Q Consensus 31 ~~C~~~~~~~~~~~l~pC~~yv~~~~~~Ps~~CC~~vk~l~~-------~~~~ClC~~i~~~~~~~~-~in~~~a~~LP~ 102 (120)
.+|+ ++...|.||++|+++++..|+++||++||++++ .+..|+| .+.....+ +||.++|.+||+
T Consensus 2 ~~C~-----~v~~~L~pCl~y~~~~~~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC---~~~~~~~~~~in~~~A~~LP~ 73 (93)
T 1afh_A 2 ISCG-----QVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC---LKNAAAGVSGLNAGNAASIPS 73 (93)
T ss_dssp CSSH-----HHHHHHGGGHHHHTTSCCSCCHHHHHHHHHHHHHCCSSHHHHHHHHH---HHHHHTTSTTCCHHHHHHHHH
T ss_pred CChH-----HHHHhccCcHHHHcCCCCCChHHHHHHHHHHHHhhcCCCCCcccCEe---eccccccccCcCHHHHHHHHH
Confidence 4688 899999999999998877799999999999973 2468999 44444555 799999999999
Q ss_pred ccCCCCC----CCCCCCCc
Q 033404 103 RCNLRRP----VGKKCERY 117 (120)
Q Consensus 103 ~Cg~~~p----~~~~C~~~ 117 (120)
+||++.| +.++|+..
T Consensus 74 ~C~v~~p~~is~~~dC~~v 92 (93)
T 1afh_A 74 KCGVSIPYTISTSTDCSRV 92 (93)
T ss_dssp HHHCCCSSCCSTTCCSSSC
T ss_pred HcCCCCCCCCCCCCCCccC
Confidence 9999844 37788763
No 4
>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}
Probab=99.71 E-value=2.8e-18 Score=111.94 Aligned_cols=77 Identities=29% Similarity=0.761 Sum_probs=64.1
Q ss_pred CCCCCchhhhhhchhccHHHhhCCCCCCChhhHHHHHhhhcc-------CCcccceeccccchhhc-CCCHHHHhhchhc
Q 033404 32 ECGRTPIRSAAASLTPCLGAARNGRAKPPPICCSKLGALIRT-------APRCLCAVLLSPLAKQA-GIKPAIAISIPKR 103 (120)
Q Consensus 32 ~C~~~~~~~~~~~l~pC~~yv~~~~~~Ps~~CC~~vk~l~~~-------~~~ClC~~i~~~~~~~~-~in~~~a~~LP~~ 103 (120)
+|+ ++...|.||++|+++++. |+++||++||++++. +..|+| .++....+ +||.++|.+||++
T Consensus 2 ~C~-----~v~~~L~pCl~yv~~~~~-Ps~~CC~~lk~l~~~a~t~~d~~~~ClC---~k~~~~~~~~in~~~A~~LP~~ 72 (91)
T 1siy_A 2 TCG-----QVQGNLAQCIGFLQKGGV-VPPSCCTGVKNILNSSRTTADRRAVCSC---LKAAAGAVRGINPNNAEALPGK 72 (91)
T ss_dssp CTT-----TTHHHHHHHHHHHTSCSC-CCHHHHHHHHHHHTTTCSSHHHHHHHHH---HHHHTTCCSSCCHHHHHHHHHH
T ss_pred CHH-----HHHHhccCcHHHHhCCCC-CcHHHHHHHHHHHhhhccCCCCCcCCcc---cCCcccccCCcCHHHHHHHHHH
Confidence 688 889999999999998875 999999999998643 468999 45555667 7999999999999
Q ss_pred cCCCCC----CCCCCCCc
Q 033404 104 CNLRRP----VGKKCERY 117 (120)
Q Consensus 104 Cg~~~p----~~~~C~~~ 117 (120)
||+++| +.++|+..
T Consensus 73 Cgv~~p~~is~~~dC~~v 90 (91)
T 1siy_A 73 CGVNIPYKISTSTNCNSI 90 (91)
T ss_dssp HTCCCSSCSCTTSCSSTT
T ss_pred cCCCCCCCCCCCCCCccC
Confidence 999854 37788763
No 5
>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}
Probab=99.70 E-value=2.9e-18 Score=111.98 Aligned_cols=77 Identities=30% Similarity=0.647 Sum_probs=64.4
Q ss_pred CCCCCCchhhhhhchhccHHHhhCCCCCCChhhHHHHHhhhcc-------CCcccceeccccchhhc-CCCHHHHhhchh
Q 033404 31 GECGRTPIRSAAASLTPCLGAARNGRAKPPPICCSKLGALIRT-------APRCLCAVLLSPLAKQA-GIKPAIAISIPK 102 (120)
Q Consensus 31 ~~C~~~~~~~~~~~l~pC~~yv~~~~~~Ps~~CC~~vk~l~~~-------~~~ClC~~i~~~~~~~~-~in~~~a~~LP~ 102 (120)
.+|+ ++...|.||++|+++++. |+ +||++||++++. +..|+| .+.....+ +||.++|.+||+
T Consensus 2 ~~C~-----~v~~~L~pCl~y~~~~~~-P~-~CC~gv~~l~~~a~t~~dr~~~ClC---lk~~~~~~~~in~~~A~~LP~ 71 (91)
T 1t12_A 2 ITCG-----QVTSNLAPCLAYLRNTGP-LG-RCCGGVKALVNSARTTEDRQIACTC---LKSAAGAISGINLGKAAGLPS 71 (91)
T ss_dssp CCHH-----HHHHHTHHHHHHHTTSSC-CT-THHHHHHHHHHTTCSTHHHHHHHHH---HHHHHHHCTTCCHHHHHHHHH
T ss_pred CChH-----HHHHhccCcHHHHcCCCC-hH-HHHHHHHHHHhhccCCCCCCccCCC---ccccccccCCcChhHHHHHHH
Confidence 4677 889999999999998876 88 999999999764 578999 46555667 899999999999
Q ss_pred ccCCCCC----CCCCCCCc
Q 033404 103 RCNLRRP----VGKKCERY 117 (120)
Q Consensus 103 ~Cg~~~p----~~~~C~~~ 117 (120)
+||++.| +.++|+..
T Consensus 72 ~C~v~~p~~is~~~dC~~v 90 (91)
T 1t12_A 72 TCGVNIPYKISPSTDCSKV 90 (91)
T ss_dssp HTTCCCSSCSSSSSCCTTC
T ss_pred HcCCCCCCCCCCCCCCccC
Confidence 9999844 37788763
No 6
>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*
Probab=99.69 E-value=2.7e-18 Score=112.24 Aligned_cols=77 Identities=29% Similarity=0.740 Sum_probs=63.2
Q ss_pred CCCCCCchhhhhhchhccHHHhhCCCCCCChhhHHHHHhhh-------ccCCcccceeccccchhhc-CCCHHHHhhchh
Q 033404 31 GECGRTPIRSAAASLTPCLGAARNGRAKPPPICCSKLGALI-------RTAPRCLCAVLLSPLAKQA-GIKPAIAISIPK 102 (120)
Q Consensus 31 ~~C~~~~~~~~~~~l~pC~~yv~~~~~~Ps~~CC~~vk~l~-------~~~~~ClC~~i~~~~~~~~-~in~~~a~~LP~ 102 (120)
.+|+ ++...|.||++|+++++ .|+++||++||+++ +.+..|+|. +.....+ +||.++|.+||+
T Consensus 2 ~~C~-----~v~~~L~pCl~y~~~~~-~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~---~~~~~~~~~in~~~A~~LP~ 72 (92)
T 2alg_A 2 ITCG-----QVSSSLAPCIPYVRGGG-AVPPACCNGIRNVNNLARTTPDRQAACNCL---KQLSASVPGVNPNNAAALPG 72 (92)
T ss_dssp CCHH-----HHHHHHGGGHHHHHHCS-CCCHHHHHHHHHHHHHCCSHHHHHHHHHHH---HHHHHHSTTCCHHHHHHHHH
T ss_pred CChH-----HHHHhccCcHHHHcCCC-CCCHHHHHHHHHHHhhhcccCCCCcCCccc---cCcccccCccChHHHHHHHH
Confidence 4677 88889999999999876 58899999999987 345789995 3445556 899999999999
Q ss_pred ccCCCCC----CCCCCCC
Q 033404 103 RCNLRRP----VGKKCER 116 (120)
Q Consensus 103 ~Cg~~~p----~~~~C~~ 116 (120)
+||+++| +.++|+.
T Consensus 73 ~Cgv~~p~~is~~~dC~~ 90 (92)
T 2alg_A 73 KCGVSIPYKISASTNCAT 90 (92)
T ss_dssp HTTCCCSSCSSTTSCGGG
T ss_pred HcCCCCCCCCCCCCCCcc
Confidence 9999854 3668865
No 7
>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*
Probab=99.69 E-value=3.1e-18 Score=111.56 Aligned_cols=73 Identities=27% Similarity=0.640 Sum_probs=60.9
Q ss_pred hhhhchhccHHHhhCCCCCCChhhHHHHHhhhcc-------CCcccceeccccchhhc-CCCHHHHhhchhccCCCCC--
Q 033404 40 SAAASLTPCLGAARNGRAKPPPICCSKLGALIRT-------APRCLCAVLLSPLAKQA-GIKPAIAISIPKRCNLRRP-- 109 (120)
Q Consensus 40 ~~~~~l~pC~~yv~~~~~~Ps~~CC~~vk~l~~~-------~~~ClC~~i~~~~~~~~-~in~~~a~~LP~~Cg~~~p-- 109 (120)
++...|.||++|+++++. |+++||++||++++. |..|+| .++....+ +||.++|.+||++||+++|
T Consensus 5 ~v~~~L~pCl~y~~~~~~-Ps~~CC~~lk~l~~~a~t~~dr~~~ClC---lk~~~~~~~~in~~~A~~LP~~C~v~~p~~ 80 (90)
T 1bwo_A 5 HVDSLVRPCLSYVQGGPG-PSGQCCDGVKNLHNQARSQSDRQSACNC---LKGIARGIHNLNEDNARSIPPKCGVNLPYT 80 (90)
T ss_dssp HHHHHHGGGHHHHTTCSC-CCHHHHHHHHHHHHHCCSHHHHHHHHHH---HHHHHTTCTTCCHHHHHTHHHHHTCCCSSC
T ss_pred HHHHhhcccHHHHcCCCC-CCHHHhHHHHHHHhhccCCCCCCccCcC---ccCchhccCCcCHHHHHHHHHHcCCCCCCC
Confidence 888999999999998875 999999999998742 568999 55555666 7999999999999999844
Q ss_pred --CCCCCCC
Q 033404 110 --VGKKCER 116 (120)
Q Consensus 110 --~~~~C~~ 116 (120)
+.++|+.
T Consensus 81 is~~~dC~~ 89 (90)
T 1bwo_A 81 ISLNIDCSR 89 (90)
T ss_dssp CCTTCCGGG
T ss_pred CCCCCCCCC
Confidence 3667764
No 8
>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*
Probab=99.59 E-value=2.9e-16 Score=97.04 Aligned_cols=62 Identities=31% Similarity=0.548 Sum_probs=52.3
Q ss_pred hhchhccHHHhhCCCCCCChhhHHHHHhhhccCCcccceeccccchhhcCCCHHHHhhchhccCCCCC
Q 033404 42 AASLTPCLGAARNGRAKPPPICCSKLGALIRTAPRCLCAVLLSPLAKQAGIKPAIAISIPKRCNLRRP 109 (120)
Q Consensus 42 ~~~l~pC~~yv~~~~~~Ps~~CC~~vk~l~~~~~~ClC~~i~~~~~~~~~in~~~a~~LP~~Cg~~~p 109 (120)
...|.||++|+++++ +||.+||++||+ +..|+|+|+...... .+||.++|.+||++||+++|
T Consensus 4 ~~~L~pC~~~v~~~~-~Ps~~CC~~lk~----~~~ClC~~~k~~~~~-~~in~~~A~~Lp~~Cgv~~P 65 (67)
T 1n89_A 4 ASQLAVCASAILSGA-KPSGECCGNLRA----QQGCFCQYAKDPTYG-QYIRSPHARDTLTSCGLAVP 65 (67)
T ss_dssp SSTTHHHHHHHTTCC-CCCHHHHHHHHH----HSSHHHHGGGCSTTH-HHHTCHHHHHHHHHHTSCCS
T ss_pred hhhcccCHHHHcCCC-CCCHHHHHhhCC----CCCCCCccccCcccc-cccCHHHHHHHHHHcCCCCC
Confidence 457999999999875 799999999997 489999997554333 25999999999999999987
No 9
>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1
Probab=99.58 E-value=2.4e-16 Score=98.00 Aligned_cols=62 Identities=31% Similarity=0.600 Sum_probs=52.5
Q ss_pred hhchhccHHHhhCCCCCCChhhHHHHHhhhccCCcccceeccccchhhcCCCHHHHhhchhccCCCCC
Q 033404 42 AASLTPCLGAARNGRAKPPPICCSKLGALIRTAPRCLCAVLLSPLAKQAGIKPAIAISIPKRCNLRRP 109 (120)
Q Consensus 42 ~~~l~pC~~yv~~~~~~Ps~~CC~~vk~l~~~~~~ClC~~i~~~~~~~~~in~~~a~~LP~~Cg~~~p 109 (120)
...|.||++|++++. +||.+||++||+ +..|+|+|+....... +||.++|.+||++||+++|
T Consensus 5 ~~~L~pC~~~v~~~~-~Ps~~CC~~lk~----~~~ClC~~~k~~~~~~-~in~~~A~~Lp~~Cgv~~P 66 (69)
T 1l6h_A 5 AGQLTVCTGAIAGGA-RPTAACCSSLRA----QQGCFCQFAKDPRYGR-YVNSPNARKAVSSCGIALP 66 (69)
T ss_dssp TTTHHHHHHHHTTCC-STTHHHHHHHHH----HHHHHHHHTTCSSHHH-HTTTTTGGGCCCCCSSCSC
T ss_pred hhhcccCHHHHcCCC-CCCHHHHHhhCC----CCCCCCccccCccccc-ccCHHHHHHHHHHcCCCCC
Confidence 457999999999875 799999999997 4789999975543332 5999999999999999987
No 10
>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1
Probab=96.93 E-value=0.00027 Score=44.47 Aligned_cols=68 Identities=25% Similarity=0.465 Sum_probs=49.0
Q ss_pred chhccHHHhhCCCCCCChhhHHHHHhhhccC-CcccceeccccchhhcCCCHHHHhh-chhccCCCCCCCCCCCC
Q 033404 44 SLTPCLGAARNGRAKPPPICCSKLGALIRTA-PRCLCAVLLSPLAKQAGIKPAIAIS-IPKRCNLRRPVGKKCER 116 (120)
Q Consensus 44 ~l~pC~~yv~~~~~~Ps~~CC~~vk~l~~~~-~~ClC~~i~~~~~~~~~in~~~a~~-LP~~Cg~~~p~~~~C~~ 116 (120)
+|--|..-+.+ ...|...||+-++.+.+.+ ..|||..+ + ..++ +|..-..+ |-..||.+.|++++|..
T Consensus 10 kLgvCanvL~g-~~~~~~~CC~Ll~GL~dleAAvCLCtai-k--~Lgi-lnlpv~L~llln~Cgk~~P~gF~C~~ 79 (80)
T 1hyp_A 10 DLSICLNILGG-SLGTVDDCCALIGGLGDIEAIVCLCIQL-R--ALGI-LNLNRNLQLILNSCGRSYPSNATCPR 79 (80)
T ss_dssp CCGGGGGGGGT-CCTTHHHHHHHHHTSCHHHHHHHHHHHH-H--HHTC-SCHHHHHHHHHHHTTCSSCCCCCCSC
T ss_pred chhHHHHHhCc-CCCCCCccchhhhCcchhhhhhhhhhhc-c--ccce-eecChhHHHHHHHhCCcCcCCCCCCC
Confidence 47778776643 2236689999999997765 56999665 2 2223 57766666 55789999999999964
No 11
>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}
Probab=95.01 E-value=0.0028 Score=50.81 Aligned_cols=52 Identities=27% Similarity=0.688 Sum_probs=34.1
Q ss_pred hhhHHHHHhhhccCCcccceeccccchhhc---------CCCHHHHhhchhccCCCCCCCCCCC
Q 033404 61 PICCSKLGALIRTAPRCLCAVLLSPLAKQA---------GIKPAIAISIPKRCNLRRPVGKKCE 115 (120)
Q Consensus 61 ~~CC~~vk~l~~~~~~ClC~~i~~~~~~~~---------~in~~~a~~LP~~Cg~~~p~~~~C~ 115 (120)
..||+.|+.+-+ .+.|.|..+.+-..... -.-..+|..||..||+..|. .|.
T Consensus 429 ~~cc~~l~~~~~-~~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~c~~~~~~--~c~ 489 (500)
T 3ob4_A 429 ERCCNELNEFEN-NQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAPQ--RCD 489 (500)
T ss_dssp HHHHHHHGGGTT-CHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHHHTHHHHTTCCCCS--CCC
T ss_pred HHHHHHHHhCCc-ccccccHHHHHHHHHHHHHhhhHHHHHHHHHHHhhCchhcCCCCCc--cCC
Confidence 679999998611 17999988744221111 01145699999999998553 565
No 12
>2lvf_A 2S albumin; allergen, copper binding, hydrophobic interaction; NMR {Bertholletia excelsa}
Probab=93.70 E-value=0.017 Score=38.39 Aligned_cols=61 Identities=28% Similarity=0.517 Sum_probs=40.6
Q ss_pred chhccHHHhhC----CC--CCCC-------hhhHHHHHhhhccCCcccceeccccch---hhcC-C-------CHHHHhh
Q 033404 44 SLTPCLGAARN----GR--AKPP-------PICCSKLGALIRTAPRCLCAVLLSPLA---KQAG-I-------KPAIAIS 99 (120)
Q Consensus 44 ~l~pC~~yv~~----~~--~~Ps-------~~CC~~vk~l~~~~~~ClC~~i~~~~~---~~~~-i-------n~~~a~~ 99 (120)
.|..|..|+.. +. ..+. ..||+.|+.+ +..|.|..+..-+. ..++ + -+.+|.+
T Consensus 17 ~L~~Cq~yv~qq~~~~~~~~~~~~~~~~~l~~CC~qL~qv---~~~CrC~aL~~~v~~~~qq~~~~~~~~~~~~~q~A~~ 93 (114)
T 2lvf_A 17 MLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGM---DESCRCEGLRMMMRMMQQKEMQPRGEQMRRMMRLAEN 93 (114)
T ss_dssp HHHHHHHHHHHHHHTTTTCSCCSSSCCHHHHHHHHHHHHS---CHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHHHHC---CcCccCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHh
Confidence 58999999962 11 1111 3499999985 78899988643211 1111 1 2467899
Q ss_pred chhccCCC
Q 033404 100 IPKRCNLR 107 (120)
Q Consensus 100 LP~~Cg~~ 107 (120)
||+.||+.
T Consensus 94 LP~~C~i~ 101 (114)
T 2lvf_A 94 IPSRCNLS 101 (114)
T ss_dssp HHHHHCCC
T ss_pred ChHhcCCC
Confidence 99999998
No 13
>1hss_A 0.19 alpha-amylase inhibitor; cereal inhibitor, animal amylase; 2.06A {Triticum aestivum} SCOP: a.52.1.2
Probab=93.35 E-value=0.0036 Score=42.44 Aligned_cols=67 Identities=28% Similarity=0.464 Sum_probs=43.3
Q ss_pred hchhccHHHhhCC---CCCC---ChhhHHHHHhhhccCCcccceeccccch---hhcC-----------------CCHHH
Q 033404 43 ASLTPCLGAARNG---RAKP---PPICCSKLGALIRTAPRCLCAVLLSPLA---KQAG-----------------IKPAI 96 (120)
Q Consensus 43 ~~l~pC~~yv~~~---~~~P---s~~CC~~vk~l~~~~~~ClC~~i~~~~~---~~~~-----------------in~~~ 96 (120)
..|..|..|+... ...| ...||+.|+.+ ...|.|..+..-.. ...| +-...
T Consensus 15 ~pL~~Cr~Yv~~~C~g~~~p~~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~g~~~g~~~~e~~pgCrre~~~~~ 91 (124)
T 1hss_A 15 PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEHGAQEGQAGTGAFPRCRREVVKLT 91 (124)
T ss_dssp SCCTTHHHHHHHHTTTCCCCHHHHHHHHHHHHTS---CTTTHHHHHHHHHHHHHHHC---------CCSTTCCHHHHHHH
T ss_pred CcchHHHHHHHHHccCCCCcHHHHHHHHHHHHhc---CcccchHHHHHHHHhhhhhhhhhccccchhhccCCcHHHHHHH
Confidence 3588899999521 1123 35799999985 68999988643221 1011 11226
Q ss_pred HhhchhccCCCCC-CCC
Q 033404 97 AISIPKRCNLRRP-VGK 112 (120)
Q Consensus 97 a~~LP~~Cg~~~p-~~~ 112 (120)
|..||..||+..+ ++.
T Consensus 92 A~~LP~~Cnl~~~~~g~ 108 (124)
T 1hss_A 92 AASITAVCRLPIVVDAS 108 (124)
T ss_dssp HTTHHHHTTCCEECSTT
T ss_pred HHhchhhcCCCCCCCCC
Confidence 8889999999876 444
No 14
>1s6d_A Albumin 8; all helix, folded LEAF, right-handed superhelix, disulphide rich, plant protein; NMR {Helianthus annuus} SCOP: a.52.1.3
Probab=91.99 E-value=0.076 Score=34.57 Aligned_cols=60 Identities=23% Similarity=0.481 Sum_probs=42.1
Q ss_pred hhccHHHhhCCC------------CCCChhhHHHHHhhhccCCcccceeccccchhhc-C----CCHHHHhhchhccCCC
Q 033404 45 LTPCLGAARNGR------------AKPPPICCSKLGALIRTAPRCLCAVLLSPLAKQA-G----IKPAIAISIPKRCNLR 107 (120)
Q Consensus 45 l~pC~~yv~~~~------------~~Ps~~CC~~vk~l~~~~~~ClC~~i~~~~~~~~-~----in~~~a~~LP~~Cg~~ 107 (120)
|.+|..|+.... ...-..||+.|+.+ +..|.|..+..-.-..+ | -...+|.+||..||++
T Consensus 21 L~~Cq~yv~qq~~~~~~~~~~~~~e~~~qqCC~qL~~~---~~~CrC~al~~~~Q~q~~g~q~~~~~q~A~~LP~~C~i~ 97 (103)
T 1s6d_A 21 LNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL---DEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM 97 (103)
T ss_dssp TTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHS---CGGGSSHHHHHHTTSTTCSSTHHHHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHhhccCCcccccccHHHHHHHHHHHHhc---CcccCcHHHHHHHHHHhcchhHHHHHHHHHhcHHhcCCC
Confidence 899999996421 12347899999985 78999988743221112 2 1356788999999997
No 15
>1pnb_B Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3
Probab=89.10 E-value=0.082 Score=32.45 Aligned_cols=54 Identities=26% Similarity=0.476 Sum_probs=36.4
Q ss_pred CCChhhHHHHHhhhccCCcccceeccccch-----hhcC-----CCHHHHhhchhccCCCCCCCCCCCC
Q 033404 58 KPPPICCSKLGALIRTAPRCLCAVLLSPLA-----KQAG-----IKPAIAISIPKRCNLRRPVGKKCER 116 (120)
Q Consensus 58 ~Ps~~CC~~vk~l~~~~~~ClC~~i~~~~~-----~~~~-----in~~~a~~LP~~Cg~~~p~~~~C~~ 116 (120)
..-..||+.|+.+ +..|.|..+..-.. ..++ -...+|.+||..||+..| ..|.-
T Consensus 9 ~~~qqCC~qL~~~---~~~CrC~aL~~~~~~~~~qgq~~~~q~~~~~q~a~~LP~~Cnl~~~--~~C~~ 72 (75)
T 1pnb_B 9 WLREQCCNELYQE---DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQI--GTCPF 72 (75)
T ss_dssp SCTHHHHHHHHTS---CGGGSHHHHHHHHHHHHSGGGCSSCCHHHHHHHCCSCSCSSCCTTT--CCCCC
T ss_pred HHHHHHHHHHHhC---CcccccHHHHHHHHHHHHHcccchHHHHHHHHHHHhhHHhcCCCCC--CCCCc
Confidence 4557899999985 78999988743221 1121 135678889999999743 35653
No 16
>1bea_A Bifunctional amylase/serine protease inhibitor; amylase/protease bifunctional inhibitor; 1.95A {Zea mays} SCOP: a.52.1.2 PDB: 1bfa_A
Probab=88.15 E-value=0.28 Score=33.17 Aligned_cols=71 Identities=21% Similarity=0.420 Sum_probs=45.3
Q ss_pred hchhccHHHhhCC-----CCCC----ChhhHHHHHhhhccCCcccceeccccchh-----------h-cCC--------C
Q 033404 43 ASLTPCLGAARNG-----RAKP----PPICCSKLGALIRTAPRCLCAVLLSPLAK-----------Q-AGI--------K 93 (120)
Q Consensus 43 ~~l~pC~~yv~~~-----~~~P----s~~CC~~vk~l~~~~~~ClC~~i~~~~~~-----------~-~~i--------n 93 (120)
..|..|..|+... ...| ...||+.|+.+ ...|.|..+..-... . ++. -
T Consensus 15 ~pL~~CR~Yv~~q~C~~g~~~p~e~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~~~~~~~G~~~~~pgC~re~~ 91 (127)
T 1bea_A 15 NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI---PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQ 91 (127)
T ss_dssp SCCHHHHHHHHHHHHSCCCSSCHHHHHHHHHHHHHTS---CGGGHHHHHHHHHHCBCCCSSSCCCBCCCCCBTTBCHHHH
T ss_pred ccchHHHHHHHHhhcccCCCCchHHHHHHHHHHHHhc---CcccchHHHHHHHHhhhcccccccccccccccCCCcHHHH
Confidence 3588999999521 1123 34699999985 689999876432110 0 111 1
Q ss_pred HHHHhhc--hhccCCCCCCCC-CCCC
Q 033404 94 PAIAISI--PKRCNLRRPVGK-KCER 116 (120)
Q Consensus 94 ~~~a~~L--P~~Cg~~~p~~~-~C~~ 116 (120)
...|..| |..||++.+++. .|..
T Consensus 92 ~~~A~~Lv~P~~Cnl~~~~g~~~C~~ 117 (127)
T 1bea_A 92 RGFAATLVTEAECNLATISGVAECPW 117 (127)
T ss_dssp HHHHTTTTSTTTTCCCCTTSSSCCTT
T ss_pred HHHHHhcCCcccCCCCCCCCCCCCCc
Confidence 4468889 999999866533 5643
No 17
>2ds2_B Sweet protein mabinlin-2 chain B; plant protein, SEED storage protein; 1.70A {Capparis masaikai}
Probab=88.13 E-value=0.12 Score=31.57 Aligned_cols=45 Identities=24% Similarity=0.524 Sum_probs=32.2
Q ss_pred hhhHHHHHhhhccCCcccceeccccchh-----h-c-----CCCHHHHhhchhccCCCC
Q 033404 61 PICCSKLGALIRTAPRCLCAVLLSPLAK-----Q-A-----GIKPAIAISIPKRCNLRR 108 (120)
Q Consensus 61 ~~CC~~vk~l~~~~~~ClC~~i~~~~~~-----~-~-----~in~~~a~~LP~~Cg~~~ 108 (120)
..||+.|+.+ +..|.|..+..-... . + .-.+.+|.+||..||+..
T Consensus 8 qqCC~eL~~~---~~~CrC~aL~~~~~~~~qqgq~~~~qq~~~~~q~a~~LP~~C~l~~ 63 (72)
T 2ds2_B 8 RQCCNQLRQV---DRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPN 63 (72)
T ss_dssp HHHHHHHTTS---CGGGHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHhc---CccccCHHHHHHHHHHHHhhhhhchHHHHHHHHHHHhhHHhcCCCC
Confidence 5799999984 889999887432210 0 1 124678899999999973
No 18
>1b1u_A Protein (alpha-amylase/trypsin inhibitor RATI); bifunctional, hydrolase inhibitor; 2.20A {Eleusine coracana} SCOP: a.52.1.2 PDB: 1bip_A 1tmq_B
Probab=86.49 E-value=0.15 Score=34.26 Aligned_cols=67 Identities=21% Similarity=0.341 Sum_probs=43.2
Q ss_pred hchhccHHHhhCC-----CCCC----ChhhHHHHHhhhccCCcccceeccccch---h--------hcCC--------CH
Q 033404 43 ASLTPCLGAARNG-----RAKP----PPICCSKLGALIRTAPRCLCAVLLSPLA---K--------QAGI--------KP 94 (120)
Q Consensus 43 ~~l~pC~~yv~~~-----~~~P----s~~CC~~vk~l~~~~~~ClC~~i~~~~~---~--------~~~i--------n~ 94 (120)
..|.+|..|+... ...| ...||+.|+++ ...|.|..+..-.. . .++. -.
T Consensus 15 ~~L~~Cr~Yv~~q~C~~g~~~p~~~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~g~~~g~~~~~~pgC~re~~~ 91 (122)
T 1b1u_A 15 NPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI---PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQR 91 (122)
T ss_dssp STTTHHHHHHHHHHHCCCCSSCHHHHHHHHHHHHHHS---CHHHHHHHHHHHHTCEECTTSCEECCCCCCCTTCCHHHHH
T ss_pred ccchHHHHHHHHhcccCCCCCchHHHHHHHHHHHHhC---CccccHHHHHHHHHhhhhhhcccccccchhccCCcHHHHH
Confidence 3588999999532 1123 35699999985 68899987643211 0 1111 12
Q ss_pred HHHhhc--hhccCCCCCCCC
Q 033404 95 AIAISI--PKRCNLRRPVGK 112 (120)
Q Consensus 95 ~~a~~L--P~~Cg~~~p~~~ 112 (120)
..|..| |..||++.+++.
T Consensus 92 ~~A~~Lv~P~~Cnl~~~~g~ 111 (122)
T 1b1u_A 92 AFAPKLVTEVECNLATIHGG 111 (122)
T ss_dssp HHGGGTTSTTTTCCCCTTSS
T ss_pred HHHHhcCCcccCCCCCCCCC
Confidence 357889 999999976543
No 19
>1psy_A 2S albumin, RICC3; albumin SEED protein, SEED storage protein, plant protein; NMR {Ricinus communis} SCOP: a.52.1.3
Probab=84.23 E-value=0.26 Score=33.12 Aligned_cols=61 Identities=21% Similarity=0.437 Sum_probs=41.3
Q ss_pred hchhccHHHhhCCC---C-------CC-----------ChhhHHHHHhhhccCCcccceeccccch----h-hc-C--C-
Q 033404 43 ASLTPCLGAARNGR---A-------KP-----------PPICCSKLGALIRTAPRCLCAVLLSPLA----K-QA-G--I- 92 (120)
Q Consensus 43 ~~l~pC~~yv~~~~---~-------~P-----------s~~CC~~vk~l~~~~~~ClC~~i~~~~~----~-~~-~--i- 92 (120)
..|.+|..|+.-.. . .| -..||+.|+.+ +..|.|..+..-+- . .+ + +
T Consensus 25 ~~L~~Cq~yv~qq~~~~~~~~~~~~~~~~e~~~qe~~~~qqCC~qL~~~---~~~C~C~aL~~~v~~~~qQgq~~gqq~~ 101 (125)
T 1psy_A 25 KDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV---RDECQCEAIKYIAEDQIQQGQLHGEESE 101 (125)
T ss_dssp STTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTC---CSSHHHHHHHHHHHHHHHHTTCCTTCSH
T ss_pred hhHHHHHHHHHHHHhcccCcchhhhcchhhcccccHHHHHHHHHHHHhc---CcccccHHHHHHHHHHHHHhhhhHHHHH
Confidence 36999999997421 0 12 25799999984 88999988733220 0 11 1 1
Q ss_pred -CHHHHhhchhccCC
Q 033404 93 -KPAIAISIPKRCNL 106 (120)
Q Consensus 93 -n~~~a~~LP~~Cg~ 106 (120)
-+.+|.+||..||+
T Consensus 102 ~~~q~A~~LP~~C~i 116 (125)
T 1psy_A 102 RVAQRAGEIVSSCGV 116 (125)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHhhHHHcCC
Confidence 25678899999999
No 20
>1w2q_A Conglutin, ARA H 6; allergen, allergene; NMR {Arachis hypogaea}
Probab=81.77 E-value=0.44 Score=32.11 Aligned_cols=64 Identities=22% Similarity=0.537 Sum_probs=42.2
Q ss_pred hchhccHHHhhCCC---C-------CC-------ChhhHHHHHhhhccCCcccceeccccch---hhc-C--CC---HHH
Q 033404 43 ASLTPCLGAARNGR---A-------KP-------PPICCSKLGALIRTAPRCLCAVLLSPLA---KQA-G--IK---PAI 96 (120)
Q Consensus 43 ~~l~pC~~yv~~~~---~-------~P-------s~~CC~~vk~l~~~~~~ClC~~i~~~~~---~~~-~--in---~~~ 96 (120)
..|.+|..|+.-.. . .. -..||+.|+.+. .+..|.|..+..-.- ..+ + .. +.+
T Consensus 23 ~qL~~Cq~yl~q~~~~~~~~~~~~~~~~~~~e~~lqqCC~qL~q~~-~~~qCrCeaL~q~~Q~qq~q~~gqq~~~~~~q~ 101 (127)
T 1w2q_A 23 VNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-NTQGCMCEALQQIMENQCDRLQDRQMVQQFKRE 101 (127)
T ss_dssp CCCHHHHHHHHTGGGSSSSSCSCCCTTSCCHHHHHHHHHHHHHHTS-CCCTTHHHHHHHHHHHSCTTTTTSTTHHHHHHH
T ss_pred hhHHHHHHHHHHHHhhccCCccchhhcccccHHHHHHHHHHHHhhc-cCCCccCHHHHHHHHHHHhhhhhHHHHHHHHHH
Confidence 35999999997421 0 01 257999999842 268999988743220 112 2 22 467
Q ss_pred HhhchhccCCC
Q 033404 97 AISIPKRCNLR 107 (120)
Q Consensus 97 a~~LP~~Cg~~ 107 (120)
|.+||..|++.
T Consensus 102 A~~LP~~C~i~ 112 (127)
T 1w2q_A 102 LMSLPQQCNFR 112 (127)
T ss_dssp HHHHHHHHTCC
T ss_pred HHHhHHhcCCC
Confidence 88999999995
No 21
>1sm7_A Recombinant IB pronapin; all alpha-helix, right-handed superhelix, plant protein; NMR {Brassica napus}
Probab=76.58 E-value=0.39 Score=31.28 Aligned_cols=67 Identities=27% Similarity=0.542 Sum_probs=42.7
Q ss_pred chhccHHHhhC----CC--CC-------C--ChhhHHHHHhhhccCCcccceeccccchh-----hcC-----CCHHHHh
Q 033404 44 SLTPCLGAARN----GR--AK-------P--PPICCSKLGALIRTAPRCLCAVLLSPLAK-----QAG-----IKPAIAI 98 (120)
Q Consensus 44 ~l~pC~~yv~~----~~--~~-------P--s~~CC~~vk~l~~~~~~ClC~~i~~~~~~-----~~~-----in~~~a~ 98 (120)
.|.+|..|+.- .. .. + -..||+.++.+ +..|.|..+..-... .++ -...+|.
T Consensus 14 ~L~~C~~yv~qq~~~~~~~~~~~~~~~~~~~~qqCC~qL~~v---~~qCrC~al~~~v~~~~~qgq~~~~~~~~~~~~a~ 90 (109)
T 1sm7_A 14 HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE---DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAK 90 (109)
T ss_dssp CCSSHHHHGGGGTTSSCCCSCSSSCTTCCTTHHHHHHHTTTT---CHHHHTTTTHHHHHTSSCSSCCCTTHHHHHHHTTS
T ss_pred cHHHHHHHHHHHhcCCCcccccccccccHHHHHHHHHHHHhc---CccCCCHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 38999999962 11 11 1 25799999985 788999876332110 011 1345678
Q ss_pred hchhccCCCCCCCCCCC
Q 033404 99 SIPKRCNLRRPVGKKCE 115 (120)
Q Consensus 99 ~LP~~Cg~~~p~~~~C~ 115 (120)
+||..||+..+ ..|.
T Consensus 91 ~LP~~Cnl~~~--~~C~ 105 (109)
T 1sm7_A 91 NLPNVCNMKQI--GTCP 105 (109)
T ss_dssp SHHHHSCCCSS--CSSC
T ss_pred hCHHhcCCCCC--CCCC
Confidence 89999999733 2454
Done!