Query 033407
Match_columns 120
No_of_seqs 151 out of 861
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 22:41:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033407.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033407hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ljo_A Non-specific lipid-tran 100.0 2.3E-34 7.9E-39 189.2 0.9 93 23-116 1-93 (93)
2 1afh_A Maize nonspecific lipid 100.0 1.1E-32 3.7E-37 181.1 1.8 93 23-115 1-93 (93)
3 1t12_A LTP 1, nonspecific lipi 100.0 2.6E-32 8.9E-37 178.7 1.2 91 23-115 1-91 (91)
4 1bwo_A NS-LTP1, nonspecific li 100.0 4.6E-32 1.6E-36 177.2 0.8 90 24-114 1-90 (90)
5 1siy_A LTP 1, NS-LTP1, nonspec 100.0 1E-31 3.5E-36 175.9 2.4 91 24-115 1-91 (91)
6 2alg_A Non-specific lipid tran 100.0 1.7E-31 5.8E-36 175.1 -0.1 92 23-115 1-92 (92)
7 2rkn_A DIR1 protein, AT5G48485 99.6 4.3E-17 1.5E-21 103.1 -0.1 71 23-104 2-76 (77)
8 1n89_A Lipid transfer protein; 99.5 3.4E-15 1.2E-19 92.1 0.2 59 31-102 5-65 (67)
9 1l6h_A LTP2, non-specific lipi 99.4 5.3E-15 1.8E-19 91.7 -1.2 63 25-102 2-66 (69)
10 3ob4_A Conglutin, maltose ABC 92.2 0.007 2.4E-07 48.5 -3.4 52 49-107 429-492 (500)
11 1hyp_A Hydrophobic protein fro 88.4 0.17 5.7E-06 31.6 1.2 73 23-112 5-78 (80)
12 1hss_A 0.19 alpha-amylase inhi 82.2 0.23 7.8E-06 33.4 -0.3 64 31-102 15-104 (124)
13 1sm7_A Recombinant IB pronapin 74.4 0.61 2.1E-05 30.3 -0.1 62 32-101 14-100 (109)
14 1b1u_A Protein (alpha-amylase/ 73.1 0.34 1.2E-05 32.4 -1.6 64 31-102 15-108 (122)
15 1s6d_A Albumin 8; all helix, f 72.2 1.3 4.4E-05 28.6 1.1 69 24-100 9-97 (103)
16 1bea_A Bifunctional amylase/se 69.1 1.1 3.9E-05 30.1 0.3 64 31-102 15-109 (127)
17 1psy_A 2S albumin, RICC3; albu 63.8 1.1 3.8E-05 29.9 -0.6 67 25-99 17-116 (125)
18 1w2q_A Conglutin, ARA H 6; all 50.9 4 0.00014 27.3 0.4 72 23-100 13-112 (127)
19 2lvf_A 2S albumin; allergen, c 38.3 12 0.00042 24.3 1.3 61 32-100 17-101 (114)
20 2ds2_B Sweet protein mabinlin- 33.8 21 0.00072 21.3 1.7 45 49-101 8-63 (72)
21 1pnb_B Napin BNIB; napin IA an 27.1 15 0.00051 22.0 0.2 48 47-102 10-67 (75)
22 4gyx_A Type III collagen fragm 26.1 27 0.00092 17.1 1.0 10 46-55 22-31 (31)
23 1ag7_A Conotoxin GS; neurotoxi 22.5 24 0.00083 17.6 0.5 13 46-58 8-20 (34)
No 1
>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}
Probab=99.98 E-value=2.3e-34 Score=189.20 Aligned_cols=93 Identities=58% Similarity=1.063 Sum_probs=88.3
Q ss_pred CCCCcccccCccccHHHHhCCCCCCCccchhhhhhhhhccCCcccccccceeecccccCCCCCCHHHHhhhhhhcCCCCC
Q 033407 23 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIP 102 (120)
Q Consensus 23 ~~~C~~v~~~L~pC~~y~~~~~~~Ps~~CC~~vk~l~~~a~t~~d~~~~C~Cl~~~~~~~~~in~~~a~~LP~~Cgv~~p 102 (120)
+++|+++...|.||++|++|++ .|+++||+|+|+|++.++|+.|||++|+|+++.+..+++||.++|.+||++|||++|
T Consensus 1 AisC~~v~~~L~pCl~Yv~g~~-~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~~~~~in~~~a~~LP~~CgV~~p 79 (93)
T 2ljo_A 1 AISCGAVTSDLSPCLTYLTGGP-GPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIP 79 (93)
T ss_dssp CCSSHHHHHHHHHHHHHHTTSS-CCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGGGCTTCCHHHHHHHHHHHTCCCS
T ss_pred CCCHHHHHHHHHhHHHHHcCCC-CCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhhccCCcCHHHHHhhhHhcCCCCC
Confidence 5789999999999999999876 699999999999999999999999999999988777778999999999999999999
Q ss_pred CCCCCCCCCCcccc
Q 033407 103 YKISPNTDCSRILF 116 (120)
Q Consensus 103 ~~is~~~dC~~i~~ 116 (120)
||||+++||++|+|
T Consensus 80 ~~Is~~~dC~~v~~ 93 (93)
T 2ljo_A 80 YKISTTTNCNTVKF 93 (93)
T ss_dssp SCCSTTCCGGGCCC
T ss_pred CCCCCCCCCCCCCC
Confidence 99999999999986
No 2
>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*
Probab=99.97 E-value=1.1e-32 Score=181.15 Aligned_cols=93 Identities=60% Similarity=1.083 Sum_probs=87.3
Q ss_pred CCCCcccccCccccHHHHhCCCCCCCccchhhhhhhhhccCCcccccccceeecccccCCCCCCHHHHhhhhhhcCCCCC
Q 033407 23 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIP 102 (120)
Q Consensus 23 ~~~C~~v~~~L~pC~~y~~~~~~~Ps~~CC~~vk~l~~~a~t~~d~~~~C~Cl~~~~~~~~~in~~~a~~LP~~Cgv~~p 102 (120)
+++|+++...|.||++|+++++..|+++||++||++++.++|++|||..|+|++..+.++++||+++|++||++||+++|
T Consensus 1 a~~C~~v~~~L~pCl~y~~~~~~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC~~~~~~~~~~in~~~A~~LP~~C~v~~p 80 (93)
T 1afh_A 1 AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIP 80 (93)
T ss_dssp CCSSHHHHHHHGGGHHHHTTSCCSCCHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHCCCS
T ss_pred CCChHHHHHhccCcHHHHcCCCCCChHHHHHHHHHHHHhhcCCCCCcccCEeeccccccccCcCHHHHHHHHHHcCCCCC
Confidence 46899999999999999998876788999999999999999999999999999887777778999999999999999999
Q ss_pred CCCCCCCCCCccc
Q 033407 103 YKISPNTDCSRIL 115 (120)
Q Consensus 103 ~~is~~~dC~~i~ 115 (120)
||||+++||++|+
T Consensus 81 ~~is~~~dC~~v~ 93 (93)
T 1afh_A 81 YTISTSTDCSRVN 93 (93)
T ss_dssp SCCSTTCCSSSCC
T ss_pred CCCCCCCCCccCC
Confidence 9999999999985
No 3
>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}
Probab=99.97 E-value=2.6e-32 Score=178.74 Aligned_cols=91 Identities=63% Similarity=1.107 Sum_probs=85.4
Q ss_pred CCCCcccccCccccHHHHhCCCCCCCccchhhhhhhhhccCCcccccccceeecccccCCCCCCHHHHhhhhhhcCCCCC
Q 033407 23 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIP 102 (120)
Q Consensus 23 ~~~C~~v~~~L~pC~~y~~~~~~~Ps~~CC~~vk~l~~~a~t~~d~~~~C~Cl~~~~~~~~~in~~~a~~LP~~Cgv~~p 102 (120)
+++|+++...|.||++|++++++ |+ +||++||+|++.++|++|||..|+|+++.+.++++||+++|.+||++||+++|
T Consensus 1 a~~C~~v~~~L~pCl~y~~~~~~-P~-~CC~gv~~l~~~a~t~~dr~~~ClClk~~~~~~~~in~~~A~~LP~~C~v~~p 78 (91)
T 1t12_A 1 AITCGQVTSNLAPCLAYLRNTGP-LG-RCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIP 78 (91)
T ss_dssp CCCHHHHHHHTHHHHHHHTTSSC-CT-THHHHHHHHHHTTCSTHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTTCCCS
T ss_pred CCChHHHHHhccCcHHHHcCCCC-hH-HHHHHHHHHHhhccCCCCCCccCCCccccccccCCcChhHHHHHHHHcCCCCC
Confidence 46899999999999999999886 88 99999999999999999999999999877777778999999999999999999
Q ss_pred CCCCCCCCCCccc
Q 033407 103 YKISPNTDCSRIL 115 (120)
Q Consensus 103 ~~is~~~dC~~i~ 115 (120)
||||+++||++|+
T Consensus 79 ~~is~~~dC~~v~ 91 (91)
T 1t12_A 79 YKISPSTDCSKVQ 91 (91)
T ss_dssp SCSSSSSCCTTCC
T ss_pred CCCCCCCCCccCC
Confidence 9999999999985
No 4
>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*
Probab=99.97 E-value=4.6e-32 Score=177.23 Aligned_cols=90 Identities=46% Similarity=0.991 Sum_probs=84.8
Q ss_pred CCCcccccCccccHHHHhCCCCCCCccchhhhhhhhhccCCcccccccceeecccccCCCCCCHHHHhhhhhhcCCCCCC
Q 033407 24 ITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPY 103 (120)
Q Consensus 24 ~~C~~v~~~L~pC~~y~~~~~~~Ps~~CC~~vk~l~~~a~t~~d~~~~C~Cl~~~~~~~~~in~~~a~~LP~~Cgv~~p~ 103 (120)
++|+++...|.||++|++++++ |+++||++||++++.|+|++|||..|+|+++.+.++++||+++|++||++||+++||
T Consensus 1 i~C~~v~~~L~pCl~y~~~~~~-Ps~~CC~~lk~l~~~a~t~~dr~~~ClClk~~~~~~~~in~~~A~~LP~~C~v~~p~ 79 (90)
T 1bwo_A 1 IDCGHVDSLVRPCLSYVQGGPG-PSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPY 79 (90)
T ss_dssp CCHHHHHHHHGGGHHHHTTCSC-CCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHTTCTTCCHHHHHTHHHHHTCCCSS
T ss_pred CCHHHHHHhhcccHHHHcCCCC-CCHHHhHHHHHHHhhccCCCCCCccCcCccCchhccCCcCHHHHHHHHHHcCCCCCC
Confidence 4799999999999999999875 999999999999999999999999999998877777789999999999999999999
Q ss_pred CCCCCCCCCcc
Q 033407 104 KISPNTDCSRI 114 (120)
Q Consensus 104 ~is~~~dC~~i 114 (120)
|||+++||++|
T Consensus 80 ~is~~~dC~~v 90 (90)
T 1bwo_A 80 TISLNIDCSRV 90 (90)
T ss_dssp CCCTTCCGGGC
T ss_pred CCCCCCCCCCC
Confidence 99999999986
No 5
>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}
Probab=99.97 E-value=1e-31 Score=175.86 Aligned_cols=91 Identities=55% Similarity=1.076 Sum_probs=85.4
Q ss_pred CCCcccccCccccHHHHhCCCCCCCccchhhhhhhhhccCCcccccccceeecccccCCCCCCHHHHhhhhhhcCCCCCC
Q 033407 24 ITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPY 103 (120)
Q Consensus 24 ~~C~~v~~~L~pC~~y~~~~~~~Ps~~CC~~vk~l~~~a~t~~d~~~~C~Cl~~~~~~~~~in~~~a~~LP~~Cgv~~p~ 103 (120)
++|+++...|.||++|++++++ |+++||++||++++.|+|+.|||..|+|+++.+.++++||+++|++||++||+++||
T Consensus 1 i~C~~v~~~L~pCl~yv~~~~~-Ps~~CC~~lk~l~~~a~t~~d~~~~ClC~k~~~~~~~~in~~~A~~LP~~Cgv~~p~ 79 (91)
T 1siy_A 1 MTCGQVQGNLAQCIGFLQKGGV-VPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPY 79 (91)
T ss_dssp CCTTTTHHHHHHHHHHHTSCSC-CCHHHHHHHHHHHTTTCSSHHHHHHHHHHHHHTTCCSSCCHHHHHHHHHHHTCCCSS
T ss_pred CCHHHHHHhccCcHHHHhCCCC-CcHHHHHHHHHHHhhhccCCCCCcCCcccCCcccccCCcCHHHHHHHHHHcCCCCCC
Confidence 4799999999999999999875 999999999999999999999999999998877777789999999999999999999
Q ss_pred CCCCCCCCCccc
Q 033407 104 KISPNTDCSRIL 115 (120)
Q Consensus 104 ~is~~~dC~~i~ 115 (120)
+||+++||++|+
T Consensus 80 ~is~~~dC~~v~ 91 (91)
T 1siy_A 80 KISTSTNCNSIN 91 (91)
T ss_dssp CSCTTSCSSTTC
T ss_pred CCCCCCCCccCC
Confidence 999999999985
No 6
>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*
Probab=99.96 E-value=1.7e-31 Score=175.13 Aligned_cols=92 Identities=65% Similarity=1.205 Sum_probs=85.8
Q ss_pred CCCCcccccCccccHHHHhCCCCCCCccchhhhhhhhhccCCcccccccceeecccccCCCCCCHHHHhhhhhhcCCCCC
Q 033407 23 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIP 102 (120)
Q Consensus 23 ~~~C~~v~~~L~pC~~y~~~~~~~Ps~~CC~~vk~l~~~a~t~~d~~~~C~Cl~~~~~~~~~in~~~a~~LP~~Cgv~~p 102 (120)
+++|+++...|.||++|+++++ .|+++||++||+|++.|+|++|||..|+|++..+.++++||+++|++||++||+++|
T Consensus 1 ~~~C~~v~~~L~pCl~y~~~~~-~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~~~~~~~~in~~~A~~LP~~Cgv~~p 79 (92)
T 2alg_A 1 MITCGQVSSSLAPCIPYVRGGG-AVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVSIP 79 (92)
T ss_dssp CCCHHHHHHHHGGGHHHHHHCS-CCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTTCCCS
T ss_pred CCChHHHHHhccCcHHHHcCCC-CCCHHHHHHHHHHHhhhcccCCCCcCCccccCcccccCccChHHHHHHHHHcCCCCC
Confidence 3689999999999999999887 588999999999999999999999999999877777778999999999999999999
Q ss_pred CCCCCCCCCCccc
Q 033407 103 YKISPNTDCSRIL 115 (120)
Q Consensus 103 ~~is~~~dC~~i~ 115 (120)
|+||+++||++|+
T Consensus 80 ~~is~~~dC~~v~ 92 (92)
T 2alg_A 80 YKISASTNCATVK 92 (92)
T ss_dssp SCSSTTSCGGGCC
T ss_pred CCCCCCCCCccCC
Confidence 9999999999985
No 7
>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}
Probab=99.61 E-value=4.3e-17 Score=103.06 Aligned_cols=71 Identities=28% Similarity=0.615 Sum_probs=58.3
Q ss_pred CCCCcccccCccccHHHHhCC-CCCCCccchhhhhhhhhccCCcccccccceeeccc---ccCCCCCCHHHHhhhhhhcC
Q 033407 23 AITCGQVTGSLAPCIAFLRTG-GRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQA---YRSIPGINANVAAGLPRQCG 98 (120)
Q Consensus 23 ~~~C~~v~~~L~pC~~y~~~~-~~~Ps~~CC~~vk~l~~~a~t~~d~~~~C~Cl~~~---~~~~~~in~~~a~~LP~~Cg 98 (120)
..+|+++...|.||++|++++ ...|+++||++||+. |+ .|+|.+.. +.++ +||.++|++||++||
T Consensus 2 ~~~C~~~~~~L~pC~~yv~~~~~~~Ps~~CC~~lk~~--------~~--~ClC~~~~~~~~~~~-gin~~~A~~LP~~Cg 70 (77)
T 2rkn_A 2 IDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQHA--------DF--ACLCGYKNSPWLGSF-GVDPELASALPKQCG 70 (77)
T ss_dssp CCBTTBCHHHHHHHGGGGBSSSCCCCCHHHHHHHTTC--------CH--HHHHTTTTCHHHHHH-TBCHHHHHHHHHHTT
T ss_pred cchHHhHHHhHhhCHHHHcCCCCCCCCHHHHHHHHhc--------Cc--CCcCcccCCcchhhc-CcCHHHHHHHHHHcC
Confidence 468999999999999999984 457999999999971 44 66666543 4556 799999999999999
Q ss_pred CCCCCC
Q 033407 99 VSIPYK 104 (120)
Q Consensus 99 v~~p~~ 104 (120)
+++||.
T Consensus 71 v~~p~~ 76 (77)
T 2rkn_A 71 LANAPT 76 (77)
T ss_dssp CSCCCC
T ss_pred CCCCCC
Confidence 998864
No 8
>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*
Probab=99.48 E-value=3.4e-15 Score=92.11 Aligned_cols=59 Identities=27% Similarity=0.592 Sum_probs=47.5
Q ss_pred cCccccHHHHhCCCCCCCccchhhhhhhhhccCCccccccccee--ecccccCCCCCCHHHHhhhhhhcCCCCC
Q 033407 31 GSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNC--LKQAYRSIPGINANVAAGLPRQCGVSIP 102 (120)
Q Consensus 31 ~~L~pC~~y~~~~~~~Ps~~CC~~vk~l~~~a~t~~d~~~~C~C--l~~~~~~~~~in~~~a~~LP~~Cgv~~p 102 (120)
+.|.||++|+++++ .|+++||++||+. ..|+| +++.... .+||.++|++||++||+++|
T Consensus 5 ~~L~pC~~~v~~~~-~Ps~~CC~~lk~~-----------~~ClC~~~k~~~~~-~~in~~~A~~Lp~~Cgv~~P 65 (67)
T 1n89_A 5 SQLAVCASAILSGA-KPSGECCGNLRAQ-----------QGCFCQYAKDPTYG-QYIRSPHARDTLTSCGLAVP 65 (67)
T ss_dssp STTHHHHHHHTTCC-CCCHHHHHHHHHH-----------SSHHHHGGGCSTTH-HHHTCHHHHHHHHHHTSCCS
T ss_pred hhcccCHHHHcCCC-CCCHHHHHhhCCC-----------CCCCCccccCcccc-cccCHHHHHHHHHHcCCCCC
Confidence 48999999999876 7999999999972 35666 6654322 25999999999999999876
No 9
>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1
Probab=99.43 E-value=5.3e-15 Score=91.75 Aligned_cols=63 Identities=25% Similarity=0.601 Sum_probs=49.5
Q ss_pred CCcccccCccccHHHHhCCCCCCCccchhhhhhhhhccCCccccccccee--ecccccCCCCCCHHHHhhhhhhcCCCCC
Q 033407 25 TCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNC--LKQAYRSIPGINANVAAGLPRQCGVSIP 102 (120)
Q Consensus 25 ~C~~v~~~L~pC~~y~~~~~~~Ps~~CC~~vk~l~~~a~t~~d~~~~C~C--l~~~~~~~~~in~~~a~~LP~~Cgv~~p 102 (120)
+|+.. .|.||++|+++++ .|+++||++||+. ..|+| +++.... .+||.++|++||++||+++|
T Consensus 2 ~C~~~--~L~pC~~~v~~~~-~Ps~~CC~~lk~~-----------~~ClC~~~k~~~~~-~~in~~~A~~Lp~~Cgv~~P 66 (69)
T 1l6h_A 2 GCNAG--QLTVCTGAIAGGA-RPTAACCSSLRAQ-----------QGCFCQFAKDPRYG-RYVNSPNARKAVSSCGIALP 66 (69)
T ss_dssp CSTTT--THHHHHHHHTTCC-STTHHHHHHHHHH-----------HHHHHHHTTCSSHH-HHTTTTTGGGCCCCCSSCSC
T ss_pred CCChh--hcccCHHHHcCCC-CCCHHHHHhhCCC-----------CCCCCccccCcccc-cccCHHHHHHHHHHcCCCCC
Confidence 45543 8999999999876 7999999999972 35666 6654322 25999999999999999875
No 10
>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}
Probab=92.21 E-value=0.007 Score=48.46 Aligned_cols=52 Identities=23% Similarity=0.639 Sum_probs=32.1
Q ss_pred ccchhhhhhhhhccCCcccccccceeecccccC----C------CCCCHHHHhhhhhhcCCCCC--CCCCC
Q 033407 49 PPCCNGVRSLNGAARTTPDRQAACNCLKQAYRS----I------PGINANVAAGLPRQCGVSIP--YKISP 107 (120)
Q Consensus 49 ~~CC~~vk~l~~~a~t~~d~~~~C~Cl~~~~~~----~------~~in~~~a~~LP~~Cgv~~p--~~is~ 107 (120)
.+||+.|+.+.+ ..||-|.-++..... . ..+ ..+|..||..||+..| .+|+.
T Consensus 429 ~~cc~~l~~~~~------~~~c~c~~~~~~~~~~~~~~~~~~~~~~~-~~~a~~~p~~c~~~~~~~c~~~~ 492 (500)
T 3ob4_A 429 ERCCNELNEFEN------NQRCMCEALQQIMENQSDRLQGRQQEQQF-KRELRNLPQQCGLRAPQRCDLDV 492 (500)
T ss_dssp HHHHHHHGGGTT------CHHHHHHHHHHHHHHHHTTCCSSHHHHHH-HHHHHTHHHHTTCCCCSCCCCC-
T ss_pred HHHHHHHHhCCc------ccccccHHHHHHHHHHHHHhhhHHHHHHH-HHHHhhCchhcCCCCCccCCccC
Confidence 589999998742 135666556543221 0 012 4559999999999866 44444
No 11
>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1
Probab=88.37 E-value=0.17 Score=31.61 Aligned_cols=73 Identities=25% Similarity=0.501 Sum_probs=47.3
Q ss_pred CCCCcccccCccccHHHHhCCCCCCCccchhhhhhhhhccCCcccccccceeecccccCCCCCCHHHHhh-hhhhcCCCC
Q 033407 23 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAG-LPRQCGVSI 101 (120)
Q Consensus 23 ~~~C~~v~~~L~pC~~y~~~~~~~Ps~~CC~~vk~l~~~a~t~~d~~~~C~Cl~~~~~~~~~in~~~a~~-LP~~Cgv~~ 101 (120)
...|. +|.-|.+-+.|.. .|..+||+-++.+.+. ..++|+|-...+-++ +|.+.+.+ |-..||...
T Consensus 5 ~~~CP----kLgvCanvL~g~~-~~~~~CC~Ll~GL~dl------eAAvCLCtaik~Lgi--lnlpv~L~llln~Cgk~~ 71 (80)
T 1hyp_A 5 RPSCP----DLSICLNILGGSL-GTVDDCCALIGGLGDI------EAIVCLCIQLRALGI--LNLNRNLQLILNSCGRSY 71 (80)
T ss_dssp -CCSC----CCGGGGGGGGTCC-TTHHHHHHHHHTSCHH------HHHHHHHHHHHHHTC--SCHHHHHHHHHHHTTCSS
T ss_pred CCCCC----chhHHHHHhCcCC-CCCCccchhhhCcchh------hhhhhhhhhccccce--eecChhHHHHHHHhCCcC
Confidence 34566 6888888775432 3668999999998753 246788852222233 57666666 556899987
Q ss_pred CCCCCCCCCCC
Q 033407 102 PYKISPNTDCS 112 (120)
Q Consensus 102 p~~is~~~dC~ 112 (120)
| +.+.|.
T Consensus 72 P----~gF~C~ 78 (80)
T 1hyp_A 72 P----SNATCP 78 (80)
T ss_dssp C----CCCCCS
T ss_pred c----CCCCCC
Confidence 7 556664
No 12
>1hss_A 0.19 alpha-amylase inhibitor; cereal inhibitor, animal amylase; 2.06A {Triticum aestivum} SCOP: a.52.1.2
Probab=82.21 E-value=0.23 Score=33.44 Aligned_cols=64 Identities=22% Similarity=0.486 Sum_probs=39.1
Q ss_pred cCccccHHHHhCC---CCCC---CccchhhhhhhhhccCCcccccccceeeccccc----------------CCCC----
Q 033407 31 GSLAPCIAFLRTG---GRFP---PPPCCNGVRSLNGAARTTPDRQAACNCLKQAYR----------------SIPG---- 84 (120)
Q Consensus 31 ~~L~pC~~y~~~~---~~~P---s~~CC~~vk~l~~~a~t~~d~~~~C~Cl~~~~~----------------~~~~---- 84 (120)
..|..|..|+... ...| -..||+.++++. .+|-|.-+..... .+|+
T Consensus 15 ~pL~~Cr~Yv~~~C~g~~~p~~~~~~CC~QL~~i~--------~~CRC~ALr~m~~~~~~~~g~~~g~~~~e~~pgCrre 86 (124)
T 1hss_A 15 PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHIS--------EWCRCGALYSMLDSMYKEHGAQEGQAGTGAFPRCRRE 86 (124)
T ss_dssp SCCTTHHHHHHHHTTTCCCCHHHHHHHHHHHHTSC--------TTTHHHHHHHHHHHHHHHC---------CCSTTCCHH
T ss_pred CcchHHHHHHHHHccCCCCcHHHHHHHHHHHHhcC--------cccchHHHHHHHHhhhhhhhhhccccchhhccCCcHH
Confidence 3588999999632 2123 247999999874 2455554543221 1111
Q ss_pred CCHHHHhhhhhhcCCCCC
Q 033407 85 INANVAAGLPRQCGVSIP 102 (120)
Q Consensus 85 in~~~a~~LP~~Cgv~~p 102 (120)
+-...|..||..||+.++
T Consensus 87 ~~~~~A~~LP~~Cnl~~~ 104 (124)
T 1hss_A 87 VVKLTAASITAVCRLPIV 104 (124)
T ss_dssp HHHHHHTTHHHHTTCCEE
T ss_pred HHHHHHHhchhhcCCCCC
Confidence 112368899999999866
No 13
>1sm7_A Recombinant IB pronapin; all alpha-helix, right-handed superhelix, plant protein; NMR {Brassica napus}
Probab=74.41 E-value=0.61 Score=30.27 Aligned_cols=62 Identities=26% Similarity=0.459 Sum_probs=39.1
Q ss_pred CccccHHHHhC----CC--CCC---------CccchhhhhhhhhccCCcccccccceeecccccC------CCC----CC
Q 033407 32 SLAPCIAFLRT----GG--RFP---------PPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRS------IPG----IN 86 (120)
Q Consensus 32 ~L~pC~~y~~~----~~--~~P---------s~~CC~~vk~l~~~a~t~~d~~~~C~Cl~~~~~~------~~~----in 86 (120)
.|.+|..|+.- +. ..| -..||..++.+. .++.|.-++..... +++ -.
T Consensus 14 ~L~~C~~yv~qq~~~~~~~~~~~~~~~~~~~~qqCC~qL~~v~--------~qCrC~al~~~v~~~~~qgq~~~~~~~~~ 85 (109)
T 1sm7_A 14 HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQED--------QVCVCPTLKQAAKSVRVQGQHGPFQSTRI 85 (109)
T ss_dssp CCSSHHHHGGGGTTSSCCCSCSSSCTTCCTTHHHHHHHTTTTC--------HHHHTTTTHHHHHTSSCSSCCCTTHHHHH
T ss_pred cHHHHHHHHHHHhcCCCcccccccccccHHHHHHHHHHHHhcC--------ccCCCHHHHHHHHHHHHhcccchHHHHHH
Confidence 48899999972 11 122 147999999874 35667666544321 111 12
Q ss_pred HHHHhhhhhhcCCCC
Q 033407 87 ANVAAGLPRQCGVSI 101 (120)
Q Consensus 87 ~~~a~~LP~~Cgv~~ 101 (120)
..+|..||+.||+..
T Consensus 86 ~~~a~~LP~~Cnl~~ 100 (109)
T 1sm7_A 86 YQIAKNLPNVCNMKQ 100 (109)
T ss_dssp HHTTSSHHHHSCCCS
T ss_pred HHHHHhCHHhcCCCC
Confidence 345788999999974
No 14
>1b1u_A Protein (alpha-amylase/trypsin inhibitor RATI); bifunctional, hydrolase inhibitor; 2.20A {Eleusine coracana} SCOP: a.52.1.2 PDB: 1bip_A 1tmq_B
Probab=73.13 E-value=0.34 Score=32.43 Aligned_cols=64 Identities=19% Similarity=0.531 Sum_probs=39.3
Q ss_pred cCccccHHHHhCC----CC-CCC----ccchhhhhhhhhccCCcccccccceeeccccc---------------CCCC--
Q 033407 31 GSLAPCIAFLRTG----GR-FPP----PPCCNGVRSLNGAARTTPDRQAACNCLKQAYR---------------SIPG-- 84 (120)
Q Consensus 31 ~~L~pC~~y~~~~----~~-~Ps----~~CC~~vk~l~~~a~t~~d~~~~C~Cl~~~~~---------------~~~~-- 84 (120)
..|.+|..|+... .+ .|. ..||+-++++. .+|-|.-+..... .+++
T Consensus 15 ~~L~~Cr~Yv~~q~C~~g~~~p~~~~~~~CC~QL~~i~--------~~CRC~ALr~m~~~~~~~~g~~~g~~~~~~pgC~ 86 (122)
T 1b1u_A 15 NPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIP--------AYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCP 86 (122)
T ss_dssp STTTHHHHHHHHHHHCCCCSSCHHHHHHHHHHHHHHSC--------HHHHHHHHHHHHTCEECTTSCEECCCCCCCTTCC
T ss_pred ccchHHHHHHHHhcccCCCCCchHHHHHHHHHHHHhCC--------ccccHHHHHHHHHhhhhhhcccccccchhccCCc
Confidence 4588999999632 11 232 46999999974 3455555543221 1122
Q ss_pred --CCHHHHhhh--hhhcCCCCC
Q 033407 85 --INANVAAGL--PRQCGVSIP 102 (120)
Q Consensus 85 --in~~~a~~L--P~~Cgv~~p 102 (120)
.-...|..| |..||++++
T Consensus 87 re~~~~~A~~Lv~P~~Cnl~~~ 108 (122)
T 1b1u_A 87 RQVQRAFAPKLVTEVECNLATI 108 (122)
T ss_dssp HHHHHHHGGGTTSTTTTCCCCT
T ss_pred HHHHHHHHHhcCCcccCCCCCC
Confidence 112358889 999999765
No 15
>1s6d_A Albumin 8; all helix, folded LEAF, right-handed superhelix, disulphide rich, plant protein; NMR {Helianthus annuus} SCOP: a.52.1.3
Probab=72.23 E-value=1.3 Score=28.57 Aligned_cols=69 Identities=19% Similarity=0.348 Sum_probs=43.3
Q ss_pred CCCcccc--cC-ccccHHHHhCCC----C--------CCCccchhhhhhhhhccCCcccccccceeecccc-cCCCC---
Q 033407 24 ITCGQVT--GS-LAPCIAFLRTGG----R--------FPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAY-RSIPG--- 84 (120)
Q Consensus 24 ~~C~~v~--~~-L~pC~~y~~~~~----~--------~Ps~~CC~~vk~l~~~a~t~~d~~~~C~Cl~~~~-~~~~~--- 84 (120)
..|-.-. .. |.+|-.|+.-.. + ..-..||.-++.+. .++-|.-++..+ ..+.+
T Consensus 9 q~C~qq~q~~q~L~~Cq~yv~qq~~~~~~~~~~~~~e~~~qqCC~qL~~~~--------~~CrC~al~~~~Q~q~~g~q~ 80 (103)
T 1s6d_A 9 SGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLD--------EKCMCPAIMMMLNEPMWIRMR 80 (103)
T ss_dssp SSHHHHHHHTCSTTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHSC--------GGGSSHHHHHHTTSTTCSSTH
T ss_pred cccHHHHHhChhHHHHHHHHHHHhhccCCcccccccHHHHHHHHHHHHhcC--------cccCcHHHHHHHHHHhcchhH
Confidence 4465432 24 899999997421 0 12368999999863 356666665443 12222
Q ss_pred -CCHHHHhhhhhhcCCC
Q 033407 85 -INANVAAGLPRQCGVS 100 (120)
Q Consensus 85 -in~~~a~~LP~~Cgv~ 100 (120)
-...+|..||..||++
T Consensus 81 ~~~~q~A~~LP~~C~i~ 97 (103)
T 1s6d_A 81 DQVMSMAHNLPIECNLM 97 (103)
T ss_dssp HHHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHhcHHhcCCC
Confidence 1255688999999995
No 16
>1bea_A Bifunctional amylase/serine protease inhibitor; amylase/protease bifunctional inhibitor; 1.95A {Zea mays} SCOP: a.52.1.2 PDB: 1bfa_A
Probab=69.12 E-value=1.1 Score=30.07 Aligned_cols=64 Identities=22% Similarity=0.545 Sum_probs=38.9
Q ss_pred cCccccHHHHhCC----CC-CCC----ccchhhhhhhhhccCCcccccccceeeccccc----------------CCCC-
Q 033407 31 GSLAPCIAFLRTG----GR-FPP----PPCCNGVRSLNGAARTTPDRQAACNCLKQAYR----------------SIPG- 84 (120)
Q Consensus 31 ~~L~pC~~y~~~~----~~-~Ps----~~CC~~vk~l~~~a~t~~d~~~~C~Cl~~~~~----------------~~~~- 84 (120)
..|..|..|+... ++ .|. ..||+-++++. .+|-|.-+..... .+++
T Consensus 15 ~pL~~CR~Yv~~q~C~~g~~~p~e~~~~~CC~QL~~i~--------~~CRC~ALr~m~~~~~~~~~~~~~~G~~~~~pgC 86 (127)
T 1bea_A 15 NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIP--------AYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGC 86 (127)
T ss_dssp SCCHHHHHHHHHHHHSCCCSSCHHHHHHHHHHHHHTSC--------GGGHHHHHHHHHHCBCCCSSSCCCBCCCCCBTTB
T ss_pred ccchHHHHHHHHhhcccCCCCchHHHHHHHHHHHHhcC--------cccchHHHHHHHHhhhcccccccccccccccCCC
Confidence 3588999999632 11 232 35999999874 3455555543221 1111
Q ss_pred ---CCHHHHhhh--hhhcCCCCC
Q 033407 85 ---INANVAAGL--PRQCGVSIP 102 (120)
Q Consensus 85 ---in~~~a~~L--P~~Cgv~~p 102 (120)
.-...|..| |..||++.+
T Consensus 87 ~re~~~~~A~~Lv~P~~Cnl~~~ 109 (127)
T 1bea_A 87 PREVQRGFAATLVTEAECNLATI 109 (127)
T ss_dssp CHHHHHHHHTTTTSTTTTCCCCT
T ss_pred cHHHHHHHHHhcCCcccCCCCCC
Confidence 013358899 999999765
No 17
>1psy_A 2S albumin, RICC3; albumin SEED protein, SEED storage protein, plant protein; NMR {Ricinus communis} SCOP: a.52.1.3
Probab=63.80 E-value=1.1 Score=29.93 Aligned_cols=67 Identities=28% Similarity=0.620 Sum_probs=42.4
Q ss_pred CCcccc--cCccccHHHHhCC---CC-------CC-----------CccchhhhhhhhhccCCcccccccceeeccccc-
Q 033407 25 TCGQVT--GSLAPCIAFLRTG---GR-------FP-----------PPPCCNGVRSLNGAARTTPDRQAACNCLKQAYR- 80 (120)
Q Consensus 25 ~C~~v~--~~L~pC~~y~~~~---~~-------~P-----------s~~CC~~vk~l~~~a~t~~d~~~~C~Cl~~~~~- 80 (120)
.|-.-. ..|.+|-.|+.-. .. .| -..||.-|+.+. .++.|.-++..+.
T Consensus 17 ~C~~e~qq~~L~~Cq~yv~qq~~~~~~~~~~~~~~~~e~~~qe~~~~qqCC~qL~~~~--------~~C~C~aL~~~v~~ 88 (125)
T 1psy_A 17 QCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQVR--------DECQCEAIKYIAED 88 (125)
T ss_dssp SHHHHHTTSTTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTCC--------SSHHHHHHHHHHHH
T ss_pred ccHHHHHHhhHHHHHHHHHHHHhcccCcchhhhcchhhcccccHHHHHHHHHHHHhcC--------cccccHHHHHHHHH
Confidence 465433 4799999999742 10 12 147999999863 4566666754441
Q ss_pred -----CCCC--C--CHHHHhhhhhhcCC
Q 033407 81 -----SIPG--I--NANVAAGLPRQCGV 99 (120)
Q Consensus 81 -----~~~~--i--n~~~a~~LP~~Cgv 99 (120)
.+.+ + -..+|..||..||+
T Consensus 89 ~~qQgq~~gqq~~~~~q~A~~LP~~C~i 116 (125)
T 1psy_A 89 QIQQGQLHGEESERVAQRAGEIVSSCGV 116 (125)
T ss_dssp HHHHTTCCTTCSHHHHHHHHHHHHHHTC
T ss_pred HHHHhhhhHHHHHHHHHHHHhhHHHcCC
Confidence 1111 1 15668999999999
No 18
>1w2q_A Conglutin, ARA H 6; allergen, allergene; NMR {Arachis hypogaea}
Probab=50.89 E-value=4 Score=27.30 Aligned_cols=72 Identities=18% Similarity=0.493 Sum_probs=44.5
Q ss_pred CCCCcccc--cCccccHHHHhCC---CC-------CC-------CccchhhhhhhhhccCCcccccccceeecccc----
Q 033407 23 AITCGQVT--GSLAPCIAFLRTG---GR-------FP-------PPPCCNGVRSLNGAARTTPDRQAACNCLKQAY---- 79 (120)
Q Consensus 23 ~~~C~~v~--~~L~pC~~y~~~~---~~-------~P-------s~~CC~~vk~l~~~a~t~~d~~~~C~Cl~~~~---- 79 (120)
...|-.-. ..|.+|-.|+.-. .. .. -..||.-|+.+.. +++|-|.-++..+
T Consensus 13 ~qqC~qq~q~~qL~~Cq~yl~q~~~~~~~~~~~~~~~~~~~e~~lqqCC~qL~q~~~------~~qCrCeaL~q~~Q~qq 86 (127)
T 1w2q_A 13 SSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMEN------TQGCMCEALQQIMENQC 86 (127)
T ss_dssp TCCHHHHHTTCCCHHHHHHHHTGGGSSSSSCSCCCTTSCCHHHHHHHHHHHHHHTSC------CCTTHHHHHHHHHHHSC
T ss_pred ccccHHHHHHhhHHHHHHHHHHHHhhccCCccchhhcccccHHHHHHHHHHHHhhcc------CCCccCHHHHHHHHHHH
Confidence 34565432 3699999999742 10 01 1479999999731 2456666666544
Q ss_pred cCCCC--CC---HHHHhhhhhhcCCC
Q 033407 80 RSIPG--IN---ANVAAGLPRQCGVS 100 (120)
Q Consensus 80 ~~~~~--in---~~~a~~LP~~Cgv~ 100 (120)
..+.+ .. ..+|..||..||+.
T Consensus 87 ~q~~gqq~~~~~~q~A~~LP~~C~i~ 112 (127)
T 1w2q_A 87 DRLQDRQMVQQFKRELMSLPQQCNFR 112 (127)
T ss_dssp TTTTTSTTHHHHHHHHHHHHHHHTCC
T ss_pred hhhhhHHHHHHHHHHHHHhHHhcCCC
Confidence 12211 22 46699999999994
No 19
>2lvf_A 2S albumin; allergen, copper binding, hydrophobic interaction; NMR {Bertholletia excelsa}
Probab=38.33 E-value=12 Score=24.29 Aligned_cols=61 Identities=23% Similarity=0.632 Sum_probs=38.1
Q ss_pred CccccHHHHhC----CCC--CCC-------ccchhhhhhhhhccCCcccccccceeeccccc-------CCCC--C--CH
Q 033407 32 SLAPCIAFLRT----GGR--FPP-------PPCCNGVRSLNGAARTTPDRQAACNCLKQAYR-------SIPG--I--NA 87 (120)
Q Consensus 32 ~L~pC~~y~~~----~~~--~Ps-------~~CC~~vk~l~~~a~t~~d~~~~C~Cl~~~~~-------~~~~--i--n~ 87 (120)
.|..|..|+.- +.. .+. ..||+-|+.+. .+|.|.-|+..+. .+.+ + -.
T Consensus 17 ~L~~Cq~yv~qq~~~~~~~~~~~~~~~~~l~~CC~qL~qv~--------~~CrC~aL~~~v~~~~qq~~~~~~~~~~~~~ 88 (114)
T 2lvf_A 17 MLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGMD--------ESCRCEGLRMMMRMMQQKEMQPRGEQMRRMM 88 (114)
T ss_dssp HHHHHHHHHHHHHHTTTTCSCCSSSCCHHHHHHHHHHHHSC--------HHHHHHHHHHHHHHHHHHHCCCCSHHHHHHH
T ss_pred hHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHHHHCC--------cCccCHHHHHHHHHHHHHHhhhhhhHHHHHH
Confidence 58899999862 211 111 24999999974 3566665654332 1111 0 14
Q ss_pred HHHhhhhhhcCCC
Q 033407 88 NVAAGLPRQCGVS 100 (120)
Q Consensus 88 ~~a~~LP~~Cgv~ 100 (120)
.+|..||+.||+.
T Consensus 89 q~A~~LP~~C~i~ 101 (114)
T 2lvf_A 89 RLAENIPSRCNLS 101 (114)
T ss_dssp HHHHHHHHHHCCC
T ss_pred HHHHhChHhcCCC
Confidence 5799999999996
No 20
>2ds2_B Sweet protein mabinlin-2 chain B; plant protein, SEED storage protein; 1.70A {Capparis masaikai}
Probab=33.80 E-value=21 Score=21.25 Aligned_cols=45 Identities=29% Similarity=0.558 Sum_probs=29.5
Q ss_pred ccchhhhhhhhhccCCcccccccceeeccccc------C-CC----CCCHHHHhhhhhhcCCCC
Q 033407 49 PPCCNGVRSLNGAARTTPDRQAACNCLKQAYR------S-IP----GINANVAAGLPRQCGVSI 101 (120)
Q Consensus 49 ~~CC~~vk~l~~~a~t~~d~~~~C~Cl~~~~~------~-~~----~in~~~a~~LP~~Cgv~~ 101 (120)
..||+-++.+. .++.|.-++.... . +. .=...+|..||..||+..
T Consensus 8 qqCC~eL~~~~--------~~CrC~aL~~~~~~~~qqgq~~~~qq~~~~~q~a~~LP~~C~l~~ 63 (72)
T 2ds2_B 8 RQCCNQLRQVD--------RPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPN 63 (72)
T ss_dssp HHHHHHHTTSC--------GGGHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHhcC--------ccccCHHHHHHHHHHHHhhhhhchHHHHHHHHHHHhhHHhcCCCC
Confidence 47999999863 3566666664431 1 11 123667899999999963
No 21
>1pnb_B Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3
Probab=27.10 E-value=15 Score=22.01 Aligned_cols=48 Identities=25% Similarity=0.406 Sum_probs=30.9
Q ss_pred CCccchhhhhhhhhccCCcccccccceeeccccc------CCCC----CCHHHHhhhhhhcCCCCC
Q 033407 47 PPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYR------SIPG----INANVAAGLPRQCGVSIP 102 (120)
Q Consensus 47 Ps~~CC~~vk~l~~~a~t~~d~~~~C~Cl~~~~~------~~~~----in~~~a~~LP~~Cgv~~p 102 (120)
.-..||+-++.+. .++-|.-++.... .+++ -...+|..||..||+..+
T Consensus 10 ~~qqCC~qL~~~~--------~~CrC~aL~~~~~~~~~qgq~~~~q~~~~~q~a~~LP~~Cnl~~~ 67 (75)
T 1pnb_B 10 LREQCCNELYQED--------QVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQI 67 (75)
T ss_dssp CTHHHHHHHHTSC--------GGGSHHHHHHHHHHHHSGGGCSSCCHHHHHHHCCSCSCSSCCTTT
T ss_pred HHHHHHHHHHhCC--------cccccHHHHHHHHHHHHHcccchHHHHHHHHHHHhhHHhcCCCCC
Confidence 4468999999873 3566665654421 1221 125678889999999744
No 22
>4gyx_A Type III collagen fragment in A HOST peptide STAB the cysteine knot; collagen triple helix, type III collagen cysteine knot, BLOO clotting; 1.49A {Homo sapiens}
Probab=26.05 E-value=27 Score=17.10 Aligned_cols=10 Identities=70% Similarity=1.643 Sum_probs=5.4
Q ss_pred CCCccchhhh
Q 033407 46 FPPPPCCNGV 55 (120)
Q Consensus 46 ~Ps~~CC~~v 55 (120)
.|+..||.++
T Consensus 22 gppgpccggv 31 (31)
T 4gyx_A 22 GPPGPCCGGV 31 (31)
T ss_dssp CCCCCCC---
T ss_pred CCCCCCccCC
Confidence 4677899875
No 23
>1ag7_A Conotoxin GS; neurotoxin, MU-conotoxin, sodium channel blocker, cystine knot motif; HET: HYP CGU; NMR {Conus geographus} SCOP: g.3.6.1
Probab=22.48 E-value=24 Score=17.60 Aligned_cols=13 Identities=46% Similarity=0.981 Sum_probs=9.6
Q ss_pred CCCccchhhhhhh
Q 033407 46 FPPPPCCNGVRSL 58 (120)
Q Consensus 46 ~Ps~~CC~~vk~l 58 (120)
.=+++||.|++-=
T Consensus 8 rcppqccmglrcg 20 (34)
T 1ag7_A 8 RCPPQCCMGLRCG 20 (34)
T ss_dssp CSSSCBCTTEEEE
T ss_pred CCChhhceeeecc
Confidence 4556899998863
Done!