Query 033418
Match_columns 119
No_of_seqs 166 out of 817
Neff 5.5
Searched_HMMs 13730
Date Mon Mar 25 22:56:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033418.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/033418hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2jnya1 b.171.1.1 (A:1-59) Unc 99.1 1E-11 7.5E-16 77.1 2.0 31 88-118 23-53 (59)
2 d2pk7a1 b.171.1.1 (A:3-61) Unc 99.1 1.5E-11 1.1E-15 76.4 1.3 31 88-118 19-49 (59)
3 d2hf1a1 b.171.1.1 (A:2-60) Hyp 99.0 3.1E-11 2.3E-15 74.9 1.3 31 88-118 20-50 (59)
4 d2akla2 g.41.3.5 (A:3-40) Hypo 90.4 0.043 3.1E-06 30.1 1.1 19 89-107 16-34 (38)
5 d1akya2 g.41.2.1 (A:131-168) M 90.2 0.053 3.8E-06 29.6 1.4 17 92-108 1-17 (38)
6 d1e4va2 g.41.2.1 (A:122-156) M 89.8 0.057 4.2E-06 28.9 1.2 19 92-110 1-19 (35)
7 d1s3ga2 g.41.2.1 (A:126-160) M 88.6 0.088 6.4E-06 28.1 1.5 16 92-107 1-16 (35)
8 d1zina2 g.41.2.1 (A:126-160) M 87.7 0.11 7.8E-06 27.8 1.5 17 92-108 1-17 (35)
9 d2ak3a2 g.41.2.1 (A:125-161) M 80.9 0.29 2.1E-05 26.3 1.3 18 93-110 2-19 (37)
10 d1ubdc2 g.37.1.1 (C:323-350) Y 69.0 0.77 5.6E-05 23.0 0.8 11 94-104 3-13 (28)
11 d1pfta_ g.41.3.1 (A:) Transcri 68.8 0.98 7.2E-05 25.4 1.4 15 88-102 19-33 (50)
12 d1dl6a_ g.41.3.1 (A:) Transcri 68.6 1 7.4E-05 26.1 1.5 15 88-102 25-39 (58)
13 d1weoa_ g.44.1.1 (A:) Cellulos 66.7 1.1 8E-05 28.5 1.4 33 86-118 51-83 (93)
14 d1v87a_ g.44.1.1 (A:) Deltex p 62.8 2.8 0.0002 26.0 2.9 32 78-109 67-98 (114)
15 d1x6ea2 g.37.1.1 (A:41-66) Zin 61.5 1.3 9.2E-05 21.9 0.8 12 94-105 3-14 (26)
16 d1dx8a_ g.41.5.1 (A:) Rubredox 55.7 3 0.00022 25.0 2.0 23 88-110 2-24 (70)
17 d1p91a_ c.66.1.33 (A:) rRNA me 54.2 3.3 0.00024 29.2 2.4 28 88-116 12-40 (268)
18 d1vd4a_ g.41.3.1 (A:) Transcri 52.6 2.4 0.00018 24.9 1.1 16 89-104 10-25 (62)
19 d2adra1 g.37.1.1 (A:102-130) A 49.4 2.6 0.00019 20.9 0.8 12 94-105 3-14 (29)
20 d1vyxa_ g.44.1.3 (A:) IE1B pro 46.8 3.3 0.00024 23.0 1.1 16 91-106 45-60 (60)
21 d1sp1a_ g.37.1.1 (A:) Transcri 46.5 2.9 0.00021 20.7 0.7 13 94-106 3-15 (29)
22 d2cota2 g.37.1.1 (A:7-44) Zinc 46.2 3.1 0.00022 21.6 0.8 17 89-105 8-24 (38)
23 d1bora_ g.44.1.1 (A:) Acute pr 44.1 4.9 0.00036 22.4 1.6 25 88-112 32-56 (56)
24 d1v54f_ g.41.5.3 (F:) Cytochro 43.9 3.3 0.00024 26.3 0.8 19 88-106 73-92 (98)
25 d1v6ga2 g.39.1.3 (A:42-81) Act 40.5 4.4 0.00032 21.7 0.9 16 94-109 1-16 (40)
26 d1x6ea1 g.37.1.1 (A:8-40) Zinc 40.4 4.3 0.00032 20.6 0.8 15 91-105 5-19 (33)
27 d2ct1a2 g.37.1.1 (A:8-43) Tran 38.4 4.9 0.00036 20.6 0.8 14 93-106 8-21 (36)
28 d1a1ia2 g.37.1.1 (A:132-159) Z 38.4 6.3 0.00046 19.3 1.2 13 94-106 4-16 (28)
29 d1x6ha1 g.37.1.1 (A:44-80) Tra 36.5 6 0.00044 20.6 1.0 16 92-107 3-18 (37)
30 d1vzya2 g.81.1.1 (A:234-290) H 36.0 6.4 0.00047 22.0 1.2 14 93-106 32-45 (57)
31 d1vq0a2 g.81.1.1 (A:231-287) H 35.4 6.9 0.0005 21.9 1.2 15 92-106 29-43 (57)
32 d2dlqa2 g.37.1.1 (A:35-62) GLI 35.0 6.3 0.00046 19.3 0.9 14 94-107 2-15 (28)
33 d1a1ia3 g.37.1.1 (A:160-187) Z 34.2 6.5 0.00047 19.5 0.8 15 93-107 3-17 (28)
34 d1fqta_ b.33.1.1 (A:) Rieske-t 33.6 8.4 0.00061 23.5 1.6 23 89-111 56-78 (109)
35 d1xjha_ g.81.1.1 (A:) HSP33, C 33.4 7.5 0.00054 22.0 1.2 14 93-106 37-50 (62)
36 d2epsa1 g.37.1.1 (A:408-446) P 33.3 6.7 0.00049 20.6 0.9 15 92-106 4-18 (39)
37 d1ak2a2 g.41.2.1 (A:147-176) M 32.8 6.9 0.0005 19.7 0.8 11 97-107 1-11 (30)
38 d1x6ha2 g.37.1.1 (A:8-43) Tran 32.5 6.7 0.00049 20.0 0.8 14 92-105 7-20 (36)
39 d1y0jb1 g.37.1.2 (B:1-36) U-sh 31.7 9.3 0.00067 19.7 1.2 14 91-104 6-19 (36)
40 d1u5ka2 g.45.1.2 (A:81-237) Re 31.5 9.6 0.0007 24.6 1.6 23 86-108 83-105 (157)
41 d1vm9a_ b.33.1.1 (A:) Toluene- 30.8 9.6 0.0007 23.2 1.5 23 88-110 55-77 (109)
42 d1p7aa_ g.37.1.1 (A:) Kruppel- 30.6 7.6 0.00056 19.8 0.8 15 91-105 9-23 (37)
43 d1srka_ g.37.1.1 (A:) Zinc fin 30.4 7.8 0.00057 19.8 0.8 13 93-105 7-19 (35)
44 d1zr9a1 g.37.1.4 (A:28-94) Zin 26.1 8.8 0.00064 22.6 0.6 15 91-105 13-27 (67)
45 d1bboa1 g.37.1.1 (A:1-28) Enha 25.8 11 0.00081 18.6 0.8 9 94-102 2-10 (28)
46 d2eppa1 g.37.1.1 (A:286-338) P 25.2 12 0.00089 20.9 1.1 14 91-104 4-17 (53)
47 d1twfl_ g.41.9.2 (L:) RBP12 su 25.0 15 0.0011 20.1 1.4 16 95-110 6-21 (46)
48 d1q7ha2 d.17.6.2 (A:3-68) Hypo 25.0 21 0.0015 20.8 2.1 22 42-63 2-23 (66)
49 d1rmda1 g.37.1.1 (A:87-116) V( 24.7 9.9 0.00072 19.1 0.5 10 8-17 2-11 (30)
50 d1njqa_ g.37.1.3 (A:) SUPERMAN 24.3 15 0.0011 19.2 1.3 14 92-105 4-17 (37)
51 d2epra1 g.37.1.1 (A:350-384) P 24.3 9.8 0.00071 19.6 0.5 12 93-104 5-16 (35)
52 d2ctda1 g.37.1.1 (A:8-60) Zinc 23.5 14 0.001 20.8 1.1 13 90-102 24-36 (53)
53 d1jm7b_ g.44.1.1 (B:) bard1 RI 23.3 33 0.0024 20.1 3.0 16 96-111 58-73 (97)
54 d1d4ua2 g.39.1.5 (A:1-36) DNA 23.0 15 0.0011 19.1 1.1 13 92-104 4-16 (36)
55 d1nnqa2 g.41.5.1 (A:135-171) R 22.3 19 0.0014 18.6 1.5 13 92-104 4-16 (37)
56 d2nn6i1 b.40.4.5 (I:61-185) Ex 22.0 15 0.0011 23.4 1.2 16 88-103 106-121 (125)
57 d1sp2a_ g.37.1.1 (A:) Transcri 21.9 15 0.0011 18.1 0.9 13 94-106 3-17 (31)
58 d2f9yb1 c.14.1.4 (B:23-285) Ac 21.9 14 0.001 26.4 1.1 19 88-106 16-34 (263)
59 d1iroa_ g.41.5.1 (A:) Rubredox 21.8 22 0.0016 19.8 1.8 18 93-110 3-20 (53)
60 d2adra2 g.37.1.1 (A:131-161) A 21.4 13 0.00097 18.7 0.6 14 94-107 2-15 (31)
61 d1wiia_ g.41.3.4 (A:) Hypothet 20.8 15 0.0011 22.5 1.0 17 90-106 44-60 (85)
62 d1ibia1 g.39.1.3 (A:117-144) C 20.6 16 0.0011 18.0 0.8 8 95-102 3-10 (28)
63 d2csha1 g.37.1.1 (A:8-60) Zinc 20.6 23 0.0017 18.6 1.6 19 88-106 25-43 (53)
64 d1brfa_ g.41.5.1 (A:) Rubredox 20.4 23 0.0017 19.7 1.6 18 93-110 2-19 (53)
65 d2dsxa1 g.41.5.1 (A:1-52) Rubr 20.1 24 0.0017 19.5 1.7 18 93-110 3-20 (52)
No 1
>d2jnya1 b.171.1.1 (A:1-59) Uncharacterized protein Cgl1405/cg1592 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=99.10 E-value=1e-11 Score=77.11 Aligned_cols=31 Identities=26% Similarity=0.411 Sum_probs=28.0
Q ss_pred ccccceeecCCCCccccccCCccccCCCCCC
Q 033418 88 HLEEGALVCPETGRKFPVNKGIPNMLLHEDE 118 (119)
Q Consensus 88 ~i~~g~L~C~~c~~~ypI~~GIP~mL~~e~~ 118 (119)
+..+++|+|+.||++|||+||||+||++++.
T Consensus 23 ~~~~~~Lvc~~~~~~YPI~dgIPvLL~deA~ 53 (59)
T d2jnya1 23 LESEQLLVNERLNLAYRIDDGIPVLLIDEAT 53 (59)
T ss_dssp ETTTTEEEETTTTEEEEEETTEECCCSSCCE
T ss_pred eCCCCEEEcCccCccccccCCccccCHHHhc
Confidence 4467899999999999999999999999874
No 2
>d2pk7a1 b.171.1.1 (A:3-61) Uncharacterized protein PFL1779 {Pseudomonas fluorescens [TaxId: 294]}
Probab=99.05 E-value=1.5e-11 Score=76.41 Aligned_cols=31 Identities=29% Similarity=0.575 Sum_probs=27.9
Q ss_pred ccccceeecCCCCccccccCCccccCCCCCC
Q 033418 88 HLEEGALVCPETGRKFPVNKGIPNMLLHEDE 118 (119)
Q Consensus 88 ~i~~g~L~C~~c~~~ypI~~GIP~mL~~e~~ 118 (119)
+-.+++|+|+.|+++|||+||||+||++++.
T Consensus 19 ~~~~~~Lvc~~~~laYPI~dGIPvlL~~eAr 49 (59)
T d2pk7a1 19 SADKTELISKGAGLAYPIRDGIPVMLESEAR 49 (59)
T ss_dssp CTTSSEEEETTTTEEEEEETTEECCCGGGCE
T ss_pred eCCCCEEecCCcCccccccCCccccCHHHhc
Confidence 4457899999999999999999999999874
No 3
>d2hf1a1 b.171.1.1 (A:2-60) Hypothetical protein CV3345 {Chromobacterium violaceum [TaxId: 536]}
Probab=99.00 E-value=3.1e-11 Score=74.92 Aligned_cols=31 Identities=32% Similarity=0.618 Sum_probs=27.8
Q ss_pred ccccceeecCCCCccccccCCccccCCCCCC
Q 033418 88 HLEEGALVCPETGRKFPVNKGIPNMLLHEDE 118 (119)
Q Consensus 88 ~i~~g~L~C~~c~~~ypI~~GIP~mL~~e~~ 118 (119)
+..+++|+|+.|+++|||+||||+||++++.
T Consensus 20 ~~~~~~Lvc~~~~l~YPI~dGIPvlL~~eAr 50 (59)
T d2hf1a1 20 DKSKDELICKGDRLAFPIKDGIPMMLESEAR 50 (59)
T ss_dssp ETTTTEEEETTTTEEEEEETTEECCCGGGCE
T ss_pred eCCCCEEecCCcCccccccCCccccCHHHhc
Confidence 4467899999999999999999999999873
No 4
>d2akla2 g.41.3.5 (A:3-40) Hypothetical protein PA0128, N-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=90.41 E-value=0.043 Score=30.12 Aligned_cols=19 Identities=32% Similarity=0.658 Sum_probs=14.7
Q ss_pred cccceeecCCCCccccccC
Q 033418 89 LEEGALVCPETGRKFPVNK 107 (119)
Q Consensus 89 i~~g~L~C~~c~~~ypI~~ 107 (119)
-..+.|+||+|||.|+-.+
T Consensus 16 edg~l~vCPeC~hEW~~~~ 34 (38)
T d2akla2 16 EDGALLVCPECAHEWSPNE 34 (38)
T ss_dssp ECSSSEEETTTTEEECTTT
T ss_pred cCCCEEECCcccCcCCccc
Confidence 3456789999999997544
No 5
>d1akya2 g.41.2.1 (A:131-168) Microbial and mitochondrial ADK, insert "zinc finger" domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.22 E-value=0.053 Score=29.59 Aligned_cols=17 Identities=29% Similarity=0.567 Sum_probs=14.0
Q ss_pred ceeecCCCCccccccCC
Q 033418 92 GALVCPETGRKFPVNKG 108 (119)
Q Consensus 92 g~L~C~~c~~~ypI~~G 108 (119)
|..+|+.||+.|-|.--
T Consensus 1 GRr~C~~cG~~Yh~~~~ 17 (38)
T d1akya2 1 GRLIHPASGRSYHKIFN 17 (38)
T ss_dssp TEEECTTTCCEEETTTB
T ss_pred CccCCcCccchhhhhcc
Confidence 67899999999977543
No 6
>d1e4va2 g.41.2.1 (A:122-156) Microbial and mitochondrial ADK, insert "zinc finger" domain {Escherichia coli [TaxId: 562]}
Probab=89.77 E-value=0.057 Score=28.90 Aligned_cols=19 Identities=32% Similarity=0.476 Sum_probs=15.4
Q ss_pred ceeecCCCCccccccCCcc
Q 033418 92 GALVCPETGRKFPVNKGIP 110 (119)
Q Consensus 92 g~L~C~~c~~~ypI~~GIP 110 (119)
|..+|+.||+.|-|.---|
T Consensus 1 GRr~c~~cG~~Yh~~~~PP 19 (35)
T d1e4va2 1 GRRVHAPSGRVYHVKFNPP 19 (35)
T ss_dssp TEEEETTTTEEEETTTBCC
T ss_pred CccCCcCcCChhhhccCcc
Confidence 6789999999999875433
No 7
>d1s3ga2 g.41.2.1 (A:126-160) Microbial and mitochondrial ADK, insert "zinc finger" domain {Bacillus globisporus [TaxId: 1459]}
Probab=88.64 E-value=0.088 Score=28.14 Aligned_cols=16 Identities=19% Similarity=0.447 Sum_probs=13.8
Q ss_pred ceeecCCCCccccccC
Q 033418 92 GALVCPETGRKFPVNK 107 (119)
Q Consensus 92 g~L~C~~c~~~ypI~~ 107 (119)
|..+|+.||+.|-|.-
T Consensus 1 GR~~C~~CG~~Yh~~~ 16 (35)
T d1s3ga2 1 GRRICKVCGTSYHLLF 16 (35)
T ss_dssp SEEEETTTCCEEETTT
T ss_pred CccCCcCcCchhcccc
Confidence 6789999999997754
No 8
>d1zina2 g.41.2.1 (A:126-160) Microbial and mitochondrial ADK, insert "zinc finger" domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=87.73 E-value=0.11 Score=27.79 Aligned_cols=17 Identities=18% Similarity=0.438 Sum_probs=14.5
Q ss_pred ceeecCCCCccccccCC
Q 033418 92 GALVCPETGRKFPVNKG 108 (119)
Q Consensus 92 g~L~C~~c~~~ypI~~G 108 (119)
|..+|+.||+.|-|.--
T Consensus 1 GRr~C~~CG~~Yh~~~~ 17 (35)
T d1zina2 1 GRRICRNCGATYHLIFH 17 (35)
T ss_dssp TEEEETTTCCEEETTTB
T ss_pred CccCCcCcCchhccccC
Confidence 67899999999998643
No 9
>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=80.88 E-value=0.29 Score=26.28 Aligned_cols=18 Identities=22% Similarity=0.532 Sum_probs=14.2
Q ss_pred eeecCCCCccccccCCcc
Q 033418 93 ALVCPETGRKFPVNKGIP 110 (119)
Q Consensus 93 ~L~C~~c~~~ypI~~GIP 110 (119)
.++||.||+.|-|.---|
T Consensus 2 R~vc~~cG~~Yh~~~~pP 19 (37)
T d2ak3a2 2 RWIHPGSGRVYNIEFNPP 19 (37)
T ss_dssp EEEETTTTEEEETTTBCC
T ss_pred ceeeCCcCChhhhccCCc
Confidence 579999999998864433
No 10
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}
Probab=68.97 E-value=0.77 Score=23.01 Aligned_cols=11 Identities=45% Similarity=0.924 Sum_probs=9.4
Q ss_pred eecCCCCcccc
Q 033418 94 LVCPETGRKFP 104 (119)
Q Consensus 94 L~C~~c~~~yp 104 (119)
-+|.+||++|-
T Consensus 3 hvc~ecgkaf~ 13 (28)
T d1ubdc2 3 HVCAECGKAFV 13 (28)
T ss_dssp EECTTTCCEES
T ss_pred chHHHHhHHHH
Confidence 48999999984
No 11
>d1pfta_ g.41.3.1 (A:) Transcription initiation factor TFIIB, N-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=68.78 E-value=0.98 Score=25.36 Aligned_cols=15 Identities=33% Similarity=0.678 Sum_probs=13.1
Q ss_pred ccccceeecCCCCcc
Q 033418 88 HLEEGALVCPETGRK 102 (119)
Q Consensus 88 ~i~~g~L~C~~c~~~ 102 (119)
+-..|+++|..||.+
T Consensus 19 D~~~Ge~vC~~CG~V 33 (50)
T d1pfta_ 19 DPERGEIVCAKCGYV 33 (50)
T ss_dssp ETTTTEEEESSSCCB
T ss_pred ECCCCeEecccCCcE
Confidence 667899999999975
No 12
>d1dl6a_ g.41.3.1 (A:) Transcription initiation factor TFIIB, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=68.61 E-value=1 Score=26.12 Aligned_cols=15 Identities=33% Similarity=0.842 Sum_probs=13.3
Q ss_pred ccccceeecCCCCcc
Q 033418 88 HLEEGALVCPETGRK 102 (119)
Q Consensus 88 ~i~~g~L~C~~c~~~ 102 (119)
+-..|+++|..||.+
T Consensus 25 D~~~Ge~vC~~CG~V 39 (58)
T d1dl6a_ 25 DYRAGDMICPECGLV 39 (58)
T ss_dssp CSSSCCEECTTTCCE
T ss_pred ECCCCcEecccCCCE
Confidence 667899999999985
No 13
>d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=66.71 E-value=1.1 Score=28.46 Aligned_cols=33 Identities=27% Similarity=0.499 Sum_probs=29.2
Q ss_pred hcccccceeecCCCCccccccCCccccCCCCCC
Q 033418 86 HLHLEEGALVCPETGRKFPVNKGIPNMLLHEDE 118 (119)
Q Consensus 86 ~~~i~~g~L~C~~c~~~ypI~~GIP~mL~~e~~ 118 (119)
..+..+|.-.||.|+..|.=.+|-|.+--++.|
T Consensus 51 EYErkeG~q~CpqCkt~Ykr~kgsprv~gDe~e 83 (93)
T d1weoa_ 51 EYERREGTQNCPQCKTRYKRLRGSPRVEGDEDE 83 (93)
T ss_dssp HHHHHTSCSSCTTTCCCCCCCTTCCCCTTSCCC
T ss_pred HHHHhccCccCcccCChhhhhcCCCCCCCCccc
Confidence 558899999999999999999999998877654
No 14
>d1v87a_ g.44.1.1 (A:) Deltex protein 2 RING-H2 domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=62.79 E-value=2.8 Score=26.01 Aligned_cols=32 Identities=19% Similarity=0.276 Sum_probs=23.8
Q ss_pred HHHHHHHHhcccccceeecCCCCccccccCCc
Q 033418 78 DDFLMKFHHLHLEEGALVCPETGRKFPVNKGI 109 (119)
Q Consensus 78 ee~L~~lH~~~i~~g~L~C~~c~~~ypI~~GI 109 (119)
.+||.......-.+|...||.|++.|.++.|.
T Consensus 67 ~~Ci~~Wl~~~~~~~~~~CP~CR~~~~~~~~~ 98 (114)
T d1v87a_ 67 LLCLLAMYCNGNKDGSLQCPSCKTIYGEKTGT 98 (114)
T ss_dssp HHHHHHHHHHTCCSSCCBCTTTCCBSSSCSSS
T ss_pred HHHHHHHHHhcCcCCCCccccccchhccCcCC
Confidence 46776655544456788999999999888763
No 15
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}
Probab=61.53 E-value=1.3 Score=21.88 Aligned_cols=12 Identities=33% Similarity=0.706 Sum_probs=9.8
Q ss_pred eecCCCCccccc
Q 033418 94 LVCPETGRKFPV 105 (119)
Q Consensus 94 L~C~~c~~~ypI 105 (119)
..|.+||++|.-
T Consensus 3 y~C~eCgK~F~~ 14 (26)
T d1x6ea2 3 YKCLECGKAFSQ 14 (26)
T ss_dssp EECSSSCCEESS
T ss_pred ccCCCCcCeecc
Confidence 369999999964
No 16
>d1dx8a_ g.41.5.1 (A:) Rubredoxin {Guillardia theta [TaxId: 55529]}
Probab=55.66 E-value=3 Score=25.02 Aligned_cols=23 Identities=26% Similarity=0.524 Sum_probs=18.6
Q ss_pred ccccceeecCCCCccccccCCcc
Q 033418 88 HLEEGALVCPETGRKFPVNKGIP 110 (119)
Q Consensus 88 ~i~~g~L~C~~c~~~ypI~~GIP 110 (119)
++.+|.-+|..||..|.=..|-|
T Consensus 2 ~~~~~ky~C~~CgyiYDp~~GD~ 24 (70)
T d1dx8a_ 2 EIDEGKYECEACGYIYEPEKGDK 24 (70)
T ss_dssp BCCSSCEEETTTCCEECTTTCCT
T ss_pred cccCCeEEcCCCCeEECcccCCc
Confidence 57789999999999997665544
No 17
>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}
Probab=54.18 E-value=3.3 Score=29.20 Aligned_cols=28 Identities=25% Similarity=0.592 Sum_probs=21.4
Q ss_pred ccccceeecCCCCccccc-cCCccccCCCC
Q 033418 88 HLEEGALVCPETGRKFPV-NKGIPNMLLHE 116 (119)
Q Consensus 88 ~i~~g~L~C~~c~~~ypI-~~GIP~mL~~e 116 (119)
...++.|+|++|. .|+| ++|+.++++..
T Consensus 12 ~~~~~~l~C~~~h-~fd~~~~Gy~~ll~~~ 40 (268)
T d1p91a_ 12 SREKNSYICPQRH-QFDMAKEGYVNLLPVQ 40 (268)
T ss_dssp EEETTEEECTTCC-EEEBCTTSCEECSCSS
T ss_pred hcCCCeEECCCCC-ccccccCceEeccccc
Confidence 4567889999875 5766 57999998754
No 18
>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.62 E-value=2.4 Score=24.88 Aligned_cols=16 Identities=19% Similarity=0.542 Sum_probs=12.7
Q ss_pred cccceeecCCCCcccc
Q 033418 89 LEEGALVCPETGRKFP 104 (119)
Q Consensus 89 i~~g~L~C~~c~~~yp 104 (119)
......+||.|++.|-
T Consensus 10 ~~~~~y~Cp~C~~~ys 25 (62)
T d1vd4a_ 10 TNRASFKCPVCSSTFT 25 (62)
T ss_dssp CSSSEEECSSSCCEEE
T ss_pred ccCCceECCCCCCCcc
Confidence 3445789999999995
No 19
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}
Probab=49.44 E-value=2.6 Score=20.87 Aligned_cols=12 Identities=33% Similarity=0.625 Sum_probs=9.9
Q ss_pred eecCCCCccccc
Q 033418 94 LVCPETGRKFPV 105 (119)
Q Consensus 94 L~C~~c~~~ypI 105 (119)
..|+.||+.|.-
T Consensus 3 ~~C~~C~k~F~~ 14 (29)
T d2adra1 3 FVCEVCTRAFAR 14 (29)
T ss_dssp BCCTTTCCCBSC
T ss_pred CCCCCCCCCCCC
Confidence 469999999964
No 20
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]}
Probab=46.75 E-value=3.3 Score=23.00 Aligned_cols=16 Identities=13% Similarity=0.277 Sum_probs=13.4
Q ss_pred cceeecCCCCcccccc
Q 033418 91 EGALVCPETGRKFPVN 106 (119)
Q Consensus 91 ~g~L~C~~c~~~ypI~ 106 (119)
.+...||.|+..|.|+
T Consensus 45 ~~~~~CP~Cr~~~~~k 60 (60)
T d1vyxa_ 45 SRNTACQICGVVYNTR 60 (60)
T ss_dssp HTCSBCTTTCCBCCCC
T ss_pred CCCCCCcccCCeeecC
Confidence 3567899999999885
No 21
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.54 E-value=2.9 Score=20.72 Aligned_cols=13 Identities=31% Similarity=0.810 Sum_probs=10.2
Q ss_pred eecCCCCcccccc
Q 033418 94 LVCPETGRKFPVN 106 (119)
Q Consensus 94 L~C~~c~~~ypI~ 106 (119)
..|+.||+.|--+
T Consensus 3 y~C~~C~k~F~~~ 15 (29)
T d1sp1a_ 3 FACPECPKRFMRS 15 (29)
T ss_dssp SCCTTTTCCCSCS
T ss_pred EECCcCCCeecch
Confidence 3699999999643
No 22
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.23 E-value=3.1 Score=21.62 Aligned_cols=17 Identities=29% Similarity=0.534 Sum_probs=12.6
Q ss_pred cccceeecCCCCccccc
Q 033418 89 LEEGALVCPETGRKFPV 105 (119)
Q Consensus 89 i~~g~L~C~~c~~~ypI 105 (119)
..+--..|+.||+.|.=
T Consensus 8 t~ekpy~C~~CgK~F~~ 24 (38)
T d2cota2 8 RERRRYKCDECGKSFSH 24 (38)
T ss_dssp CCSCSSBCSSSCCBCSC
T ss_pred CCCCCEecCCCCceeeC
Confidence 34445689999999963
No 23
>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia proto-oncoprotein PML {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.14 E-value=4.9 Score=22.38 Aligned_cols=25 Identities=24% Similarity=0.598 Sum_probs=20.1
Q ss_pred ccccceeecCCCCccccccCCcccc
Q 033418 88 HLEEGALVCPETGRKFPVNKGIPNM 112 (119)
Q Consensus 88 ~i~~g~L~C~~c~~~ypI~~GIP~m 112 (119)
-+......||.|+...++..+.|.|
T Consensus 32 Ci~~~~~~CP~Cr~~~~~~~~~~aL 56 (56)
T d1bora_ 32 CLEASGMQCPICQAPWPLGADTPAL 56 (56)
T ss_dssp TCSSSSSSCSSCCSSSSCCSSCCCC
T ss_pred HHHcCCCcCcCCCCcccCCCCCCCC
Confidence 3445677899999999999998865
No 24
>d1v54f_ g.41.5.3 (F:) Cytochrome c oxidase Subunit F {Cow (Bos taurus) [TaxId: 9913]}
Probab=43.88 E-value=3.3 Score=26.29 Aligned_cols=19 Identities=26% Similarity=0.669 Sum_probs=13.6
Q ss_pred cccccee-ecCCCCcccccc
Q 033418 88 HLEEGAL-VCPETGRKFPVN 106 (119)
Q Consensus 88 ~i~~g~L-~C~~c~~~ypI~ 106 (119)
-+.+|.. .|++||++|-..
T Consensus 73 ~l~~g~p~RC~eCG~~fkL~ 92 (98)
T d1v54f_ 73 WLHKGEAQRCPSCGTHYKLV 92 (98)
T ss_dssp EEESSSCEECTTTCCEEEEE
T ss_pred EEeCCCCcccCCCCcEEEEe
Confidence 4444433 899999999764
No 25
>d1v6ga2 g.39.1.3 (A:42-81) Actin-binding LIM protein 2, abLIM2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.47 E-value=4.4 Score=21.73 Aligned_cols=16 Identities=25% Similarity=0.559 Sum_probs=13.6
Q ss_pred eecCCCCccccccCCc
Q 033418 94 LVCPETGRKFPVNKGI 109 (119)
Q Consensus 94 L~C~~c~~~ypI~~GI 109 (119)
.+|..|.+-||+-|.+
T Consensus 1 FvC~vCr~pFP~GDRV 16 (40)
T d1v6ga2 1 FVCAVCRLPFPPGDRV 16 (40)
T ss_dssp SSCSSSCCCCCSSSCE
T ss_pred CcccccCCCCCCCCeE
Confidence 4799999999998764
No 26
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.43 E-value=4.3 Score=20.63 Aligned_cols=15 Identities=33% Similarity=0.592 Sum_probs=11.6
Q ss_pred cceeecCCCCccccc
Q 033418 91 EGALVCPETGRKFPV 105 (119)
Q Consensus 91 ~g~L~C~~c~~~ypI 105 (119)
+--..|..||+.|.-
T Consensus 5 ekpy~C~~Cgk~F~~ 19 (33)
T d1x6ea1 5 EKPYGCVECGKAFSR 19 (33)
T ss_dssp CCCEECSSSCCEESS
T ss_pred CCCeeCCCCCCEeCc
Confidence 345689999999964
No 27
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.44 E-value=4.9 Score=20.64 Aligned_cols=14 Identities=14% Similarity=0.259 Sum_probs=11.2
Q ss_pred eeecCCCCcccccc
Q 033418 93 ALVCPETGRKFPVN 106 (119)
Q Consensus 93 ~L~C~~c~~~ypI~ 106 (119)
-..|+.||+.|.-+
T Consensus 8 P~~C~~C~k~F~~~ 21 (36)
T d2ct1a2 8 PYECYICHARFTQS 21 (36)
T ss_dssp SEECTTTCCEESCH
T ss_pred CEeCCCCcccccch
Confidence 46899999999644
No 28
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=38.40 E-value=6.3 Score=19.27 Aligned_cols=13 Identities=23% Similarity=0.416 Sum_probs=10.6
Q ss_pred eecCCCCcccccc
Q 033418 94 LVCPETGRKFPVN 106 (119)
Q Consensus 94 L~C~~c~~~ypI~ 106 (119)
..|+.||+.|--+
T Consensus 4 y~C~~C~k~F~~~ 16 (28)
T d1a1ia2 4 FQCRICMRNFSRS 16 (28)
T ss_dssp EECTTTCCEESCH
T ss_pred ccCCCCcCEeccc
Confidence 5799999999643
No 29
>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.52 E-value=6 Score=20.63 Aligned_cols=16 Identities=31% Similarity=0.760 Sum_probs=12.7
Q ss_pred ceeecCCCCccccccC
Q 033418 92 GALVCPETGRKFPVNK 107 (119)
Q Consensus 92 g~L~C~~c~~~ypI~~ 107 (119)
..++|..||+.|.-++
T Consensus 3 ~afvcskcgktftrrn 18 (37)
T d1x6ha1 3 AAFVCSKCGKTFTRRN 18 (37)
T ss_dssp CCEECSSSCCEESCHH
T ss_pred ceeeecccccchhcch
Confidence 3579999999997554
No 30
>d1vzya2 g.81.1.1 (A:234-290) HSP33, C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=36.02 E-value=6.4 Score=21.99 Aligned_cols=14 Identities=21% Similarity=0.373 Sum_probs=12.6
Q ss_pred eeecCCCCcccccc
Q 033418 93 ALVCPETGRKFPVN 106 (119)
Q Consensus 93 ~L~C~~c~~~ypI~ 106 (119)
+++|.-||+.|.+.
T Consensus 32 ev~C~fC~~~Y~f~ 45 (57)
T d1vzya2 32 EAVCHFCNEKYLFT 45 (57)
T ss_dssp EEECTTTCCEEEEE
T ss_pred EEEeeCCCCEEEEC
Confidence 78999999999875
No 31
>d1vq0a2 g.81.1.1 (A:231-287) HSP33, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=35.42 E-value=6.9 Score=21.94 Aligned_cols=15 Identities=20% Similarity=0.559 Sum_probs=13.3
Q ss_pred ceeecCCCCcccccc
Q 033418 92 GALVCPETGRKFPVN 106 (119)
Q Consensus 92 g~L~C~~c~~~ypI~ 106 (119)
-+++|.-||+.|.++
T Consensus 29 iev~C~FC~~~Y~f~ 43 (57)
T d1vq0a2 29 GEVVCKWCNTRYVFS 43 (57)
T ss_dssp EEEECTTTCCEEEEC
T ss_pred eEEEeECCCCEEEEC
Confidence 489999999999875
No 32
>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=35.03 E-value=6.3 Score=19.34 Aligned_cols=14 Identities=21% Similarity=0.660 Sum_probs=10.5
Q ss_pred eecCCCCccccccC
Q 033418 94 LVCPETGRKFPVNK 107 (119)
Q Consensus 94 L~C~~c~~~ypI~~ 107 (119)
+.|+.||+.|--++
T Consensus 2 f~c~kcgkcyfrke 15 (28)
T d2dlqa2 2 FECPKCGKCYFRKE 15 (28)
T ss_dssp CBCTTTCCBCSSHH
T ss_pred CccccchhhhhhHh
Confidence 46999999986443
No 33
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=34.23 E-value=6.5 Score=19.53 Aligned_cols=15 Identities=33% Similarity=0.693 Sum_probs=11.7
Q ss_pred eeecCCCCccccccC
Q 033418 93 ALVCPETGRKFPVNK 107 (119)
Q Consensus 93 ~L~C~~c~~~ypI~~ 107 (119)
-..|..|||.|.=+|
T Consensus 3 Pf~C~~CgrkFArsd 17 (28)
T d1a1ia3 3 PFACDICGRKFARSD 17 (28)
T ss_dssp CEECTTTCCEESSHH
T ss_pred Ccccchhhhhhhcch
Confidence 468999999996543
No 34
>d1fqta_ b.33.1.1 (A:) Rieske-type ferredoxin associated with biphenyl dioxygenase {Burkholderia cepacia [TaxId: 292]}
Probab=33.65 E-value=8.4 Score=23.52 Aligned_cols=23 Identities=30% Similarity=0.372 Sum_probs=17.8
Q ss_pred cccceeecCCCCccccccCCccc
Q 033418 89 LEEGALVCPETGRKFPVNKGIPN 111 (119)
Q Consensus 89 i~~g~L~C~~c~~~ypI~~GIP~ 111 (119)
+.++.++||-.+-.|-+++|=..
T Consensus 56 ~~~~~i~Cp~H~~~F~l~tG~~~ 78 (109)
T d1fqta_ 56 LEGDVVECSLHMGKFCVRTGKVK 78 (109)
T ss_dssp EETTEEECTTTCCEEETTTCCEE
T ss_pred ecCCEEEccccCCEEECCCccCc
Confidence 34568899999999999888543
No 35
>d1xjha_ g.81.1.1 (A:) HSP33, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=33.43 E-value=7.5 Score=22.03 Aligned_cols=14 Identities=21% Similarity=0.532 Sum_probs=12.7
Q ss_pred eeecCCCCcccccc
Q 033418 93 ALVCPETGRKFPVN 106 (119)
Q Consensus 93 ~L~C~~c~~~ypI~ 106 (119)
++.|.-||+.|.++
T Consensus 37 ev~C~fC~~~Y~f~ 50 (62)
T d1xjha_ 37 DMHCDYCGNHYLFN 50 (62)
T ss_dssp EEECTTTCCEEEEE
T ss_pred EEEeeCCCCEEEEC
Confidence 78999999999885
No 36
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.28 E-value=6.7 Score=20.57 Aligned_cols=15 Identities=20% Similarity=0.578 Sum_probs=11.7
Q ss_pred ceeecCCCCcccccc
Q 033418 92 GALVCPETGRKFPVN 106 (119)
Q Consensus 92 g~L~C~~c~~~ypI~ 106 (119)
--..|..||+.|.-+
T Consensus 4 Kpy~C~~Cgk~F~~~ 18 (39)
T d2epsa1 4 KPYICQSCGKGFSRP 18 (39)
T ss_dssp CCEECSSSCCEESSH
T ss_pred CCccCCCCCCCcCCh
Confidence 346899999999754
No 37
>d1ak2a2 g.41.2.1 (A:147-176) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=32.84 E-value=6.9 Score=19.65 Aligned_cols=11 Identities=27% Similarity=0.664 Sum_probs=9.1
Q ss_pred CCCCccccccC
Q 033418 97 PETGRKFPVNK 107 (119)
Q Consensus 97 ~~c~~~ypI~~ 107 (119)
|.||+.|-|.-
T Consensus 1 P~sG~~Yhv~f 11 (30)
T d1ak2a2 1 PQSGRSYHEEF 11 (30)
T ss_dssp TTTCCEEBTTT
T ss_pred CCCCCCccccc
Confidence 68999998864
No 38
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.48 E-value=6.7 Score=20.00 Aligned_cols=14 Identities=14% Similarity=0.444 Sum_probs=11.1
Q ss_pred ceeecCCCCccccc
Q 033418 92 GALVCPETGRKFPV 105 (119)
Q Consensus 92 g~L~C~~c~~~ypI 105 (119)
--..|+.||++|.-
T Consensus 7 kPy~C~~C~k~F~~ 20 (36)
T d1x6ha2 7 KPYACSHCDKTFRQ 20 (36)
T ss_dssp CCEECSSSSCEESS
T ss_pred CCEECCCCCCCcCC
Confidence 34689999999964
No 39
>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=31.75 E-value=9.3 Score=19.70 Aligned_cols=14 Identities=21% Similarity=0.534 Sum_probs=11.2
Q ss_pred cceeecCCCCcccc
Q 033418 91 EGALVCPETGRKFP 104 (119)
Q Consensus 91 ~g~L~C~~c~~~yp 104 (119)
-..++|+-||..|.
T Consensus 6 parf~c~pcgirfs 19 (36)
T d1y0jb1 6 PARFMCLPCGIAFS 19 (36)
T ss_dssp CCCCBCTTTCCBCS
T ss_pred ccceeccccceeec
Confidence 35689999998884
No 40
>d1u5ka2 g.45.1.2 (A:81-237) Recombinational repair protein RecO, C-terminal domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=31.49 E-value=9.6 Score=24.64 Aligned_cols=23 Identities=22% Similarity=0.327 Sum_probs=18.6
Q ss_pred hcccccceeecCCCCccccccCC
Q 033418 86 HLHLEEGALVCPETGRKFPVNKG 108 (119)
Q Consensus 86 ~~~i~~g~L~C~~c~~~ypI~~G 108 (119)
+.++.+|.++|++|++..++..+
T Consensus 83 ~f~~~~Gg~~C~~c~~~~~~~~~ 105 (157)
T d1u5ka2 83 HPDPLGGQLLCSKCAALPPYPPA 105 (157)
T ss_dssp EECTTTSSEECTTTCSSCCCCHH
T ss_pred cccccCCeeECCCCCCcCCCcch
Confidence 34888999999999988776544
No 41
>d1vm9a_ b.33.1.1 (A:) Toluene-4-monooxygenase system protein C, TmoC {Pseudomonas mendocina [TaxId: 300]}
Probab=30.83 E-value=9.6 Score=23.18 Aligned_cols=23 Identities=22% Similarity=0.335 Sum_probs=20.0
Q ss_pred ccccceeecCCCCccccccCCcc
Q 033418 88 HLEEGALVCPETGRKFPVNKGIP 110 (119)
Q Consensus 88 ~i~~g~L~C~~c~~~ypI~~GIP 110 (119)
.+.++.++||-.|-.|-+++|-.
T Consensus 55 ~~~~~~i~Cp~Hg~~F~l~~G~~ 77 (109)
T d1vm9a_ 55 SYEGGVITCRAHLWTFNDGTGHG 77 (109)
T ss_dssp EEETTEEECTTTCCEEETTTCBB
T ss_pred eccCCEEEcccCCceEECCCccC
Confidence 56678999999999999999865
No 42
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}
Probab=30.57 E-value=7.6 Score=19.84 Aligned_cols=15 Identities=27% Similarity=0.636 Sum_probs=11.6
Q ss_pred cceeecCCCCccccc
Q 033418 91 EGALVCPETGRKFPV 105 (119)
Q Consensus 91 ~g~L~C~~c~~~ypI 105 (119)
|--..|+.||+.|.-
T Consensus 9 eKPy~C~~C~k~F~~ 23 (37)
T d1p7aa_ 9 IKPFQCPDCDRSFSR 23 (37)
T ss_dssp SSSBCCTTTCCCBSS
T ss_pred ccCeEeCCCCCEecC
Confidence 345689999999864
No 43
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=30.41 E-value=7.8 Score=19.82 Aligned_cols=13 Identities=23% Similarity=0.391 Sum_probs=10.5
Q ss_pred eeecCCCCccccc
Q 033418 93 ALVCPETGRKFPV 105 (119)
Q Consensus 93 ~L~C~~c~~~ypI 105 (119)
-..|+.|++.|--
T Consensus 7 Py~C~~C~k~F~~ 19 (35)
T d1srka_ 7 PFVCRICLSAFTT 19 (35)
T ss_dssp CEECSSSCCEESS
T ss_pred cccCCCCCCcccC
Confidence 3589999999863
No 44
>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.12 E-value=8.8 Score=22.55 Aligned_cols=15 Identities=27% Similarity=0.313 Sum_probs=12.7
Q ss_pred cceeecCCCCccccc
Q 033418 91 EGALVCPETGRKFPV 105 (119)
Q Consensus 91 ~g~L~C~~c~~~ypI 105 (119)
.|..+|..|++.|.-
T Consensus 13 ~gqfYCv~C~K~F~s 27 (67)
T d1zr9a1 13 GGLHRCLACARYFID 27 (67)
T ss_dssp GGCSEETTTTEECSS
T ss_pred CCEEecccccCccCC
Confidence 578899999999853
No 45
>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.75 E-value=11 Score=18.59 Aligned_cols=9 Identities=33% Similarity=0.892 Sum_probs=7.3
Q ss_pred eecCCCCcc
Q 033418 94 LVCPETGRK 102 (119)
Q Consensus 94 L~C~~c~~~ 102 (119)
-+|+.||+.
T Consensus 2 YvC~~Cg~~ 10 (28)
T d1bboa1 2 YICEECGIR 10 (28)
T ss_dssp CBCTTTCCB
T ss_pred ccccccCcc
Confidence 479999975
No 46
>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.24 E-value=12 Score=20.88 Aligned_cols=14 Identities=36% Similarity=0.698 Sum_probs=11.8
Q ss_pred cceeecCCCCcccc
Q 033418 91 EGALVCPETGRKFP 104 (119)
Q Consensus 91 ~g~L~C~~c~~~yp 104 (119)
.+.+-|.-||+.|+
T Consensus 4 ~~l~pCG~CgK~Ft 17 (53)
T d2eppa1 4 AGILPCGLCGKVFT 17 (53)
T ss_dssp CCCCCCTTTCCCCS
T ss_pred cceeeccccccccC
Confidence 45678999999997
No 47
>d1twfl_ g.41.9.2 (L:) RBP12 subunit of RNA polymerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.00 E-value=15 Score=20.15 Aligned_cols=16 Identities=19% Similarity=0.513 Sum_probs=10.3
Q ss_pred ecCCCCccccccCCcc
Q 033418 95 VCPETGRKFPVNKGIP 110 (119)
Q Consensus 95 ~C~~c~~~ypI~~GIP 110 (119)
+|.+||....|+.|=|
T Consensus 6 iCgeCg~~~~l~~~d~ 21 (46)
T d1twfl_ 6 ICAECSSKLSLSRTDA 21 (46)
T ss_dssp ECSSSCCEECCCTTST
T ss_pred EcccCCCceEeCCCCc
Confidence 5666666666666644
No 48
>d1q7ha2 d.17.6.2 (A:3-68) Hypothetical protein Ta1423, N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=24.96 E-value=21 Score=20.76 Aligned_cols=22 Identities=18% Similarity=0.228 Sum_probs=19.9
Q ss_pred hcccchhcHHHHHHHHHhCCCC
Q 033418 42 KNIFPKIEWQALVQASRSMGYS 63 (119)
Q Consensus 42 ~~~l~kldw~al~~~a~~lg~~ 63 (119)
++++.|-|...+...+.++|+.
T Consensus 2 kHfiSKke~K~i~~~m~~~GID 23 (66)
T d1q7ha2 2 KHFISKKEAKRIWEQMSRYGID 23 (66)
T ss_dssp CEECCHHHHHHHHHHHHTTTCC
T ss_pred ccchhHHHHHHHHHHHHHhCcc
Confidence 6789999999999999999984
No 49
>d1rmda1 g.37.1.1 (A:87-116) V(D)J recombination activating protein 1 (RAG1), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.65 E-value=9.9 Score=19.11 Aligned_cols=10 Identities=10% Similarity=0.199 Sum_probs=8.5
Q ss_pred hhccCcCCcc
Q 033418 8 MLSSNIKGVA 17 (119)
Q Consensus 8 ~L~c~~k~c~ 17 (119)
++.|++|.|.
T Consensus 2 ~vkCp~keC~ 11 (30)
T d1rmda1 2 MVKCPAQDCN 11 (30)
T ss_dssp EEECCSTTCC
T ss_pred cccccccccc
Confidence 4689999997
No 50
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=24.29 E-value=15 Score=19.24 Aligned_cols=14 Identities=21% Similarity=0.418 Sum_probs=11.3
Q ss_pred ceeecCCCCccccc
Q 033418 92 GALVCPETGRKFPV 105 (119)
Q Consensus 92 g~L~C~~c~~~ypI 105 (119)
....|..|++.|+-
T Consensus 4 r~~~C~~C~k~F~s 17 (37)
T d1njqa_ 4 RSYTCSFCKREFRS 17 (37)
T ss_dssp SSEECTTTCCEESS
T ss_pred CccCCCCCCCccCC
Confidence 35689999999973
No 51
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.29 E-value=9.8 Score=19.59 Aligned_cols=12 Identities=25% Similarity=0.634 Sum_probs=9.8
Q ss_pred eeecCCCCcccc
Q 033418 93 ALVCPETGRKFP 104 (119)
Q Consensus 93 ~L~C~~c~~~yp 104 (119)
...|..||++|.
T Consensus 5 ~~~ce~cgk~fr 16 (35)
T d2epra1 5 QVACEICGKIFR 16 (35)
T ss_dssp SEEETTTTEEES
T ss_pred hhhHHHHHHHHH
Confidence 457999999985
No 52
>d2ctda1 g.37.1.1 (A:8-60) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.50 E-value=14 Score=20.79 Aligned_cols=13 Identities=23% Similarity=0.708 Sum_probs=10.9
Q ss_pred ccceeecCCCCcc
Q 033418 90 EEGALVCPETGRK 102 (119)
Q Consensus 90 ~~g~L~C~~c~~~ 102 (119)
..|+.+||.|+-.
T Consensus 24 ~kG~v~CPtC~~V 36 (53)
T d2ctda1 24 DKGSVSCPTCQAV 36 (53)
T ss_dssp HTSCEECTTTCSC
T ss_pred HCCcccCCccchh
Confidence 5799999999854
No 53
>d1jm7b_ g.44.1.1 (B:) bard1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.25 E-value=33 Score=20.12 Aligned_cols=16 Identities=19% Similarity=0.077 Sum_probs=9.9
Q ss_pred cCCCCccccccCCccc
Q 033418 96 CPETGRKFPVNKGIPN 111 (119)
Q Consensus 96 C~~c~~~ypI~~GIP~ 111 (119)
||.|+..+...+=.||
T Consensus 58 CP~Cr~~~~~~~l~~n 73 (97)
T d1jm7b_ 58 CPVCYTPAWIQDLKIN 73 (97)
T ss_dssp CSSSCCBCSCSSCCCC
T ss_pred ccccCCcCchhhCccc
Confidence 8888776655543443
No 54
>d1d4ua2 g.39.1.5 (A:1-36) DNA repair factor XPA DNA- and RPA-binding domain, N-terminal subdomain {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.04 E-value=15 Score=19.13 Aligned_cols=13 Identities=31% Similarity=0.820 Sum_probs=10.7
Q ss_pred ceeecCCCCcccc
Q 033418 92 GALVCPETGRKFP 104 (119)
Q Consensus 92 g~L~C~~c~~~yp 104 (119)
..++|-+||..|.
T Consensus 4 dy~~C~eCg~~F~ 16 (36)
T d1d4ua2 4 DYVICEECGKEFM 16 (36)
T ss_dssp CCEECTTTCCEES
T ss_pred cHHHHHHhCcHHH
Confidence 4578999999885
No 55
>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=22.30 E-value=19 Score=18.60 Aligned_cols=13 Identities=23% Similarity=0.483 Sum_probs=9.6
Q ss_pred ceeecCCCCcccc
Q 033418 92 GALVCPETGRKFP 104 (119)
Q Consensus 92 g~L~C~~c~~~yp 104 (119)
..-+|+.||..|-
T Consensus 4 ~~~~C~vCG~i~~ 16 (37)
T d1nnqa2 4 KVYICPICGYTAV 16 (37)
T ss_dssp CEEECTTTCCEEE
T ss_pred cEEECCCCCCEec
Confidence 4568888888775
No 56
>d2nn6i1 b.40.4.5 (I:61-185) Exosome component 1, EXOSC1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.01 E-value=15 Score=23.45 Aligned_cols=16 Identities=25% Similarity=0.364 Sum_probs=13.0
Q ss_pred ccccceeecCCCCccc
Q 033418 88 HLEEGALVCPETGRKF 103 (119)
Q Consensus 88 ~i~~g~L~C~~c~~~y 103 (119)
-+...+|.||.||..-
T Consensus 106 ~~~~~~m~cp~~g~~E 121 (125)
T d2nn6i1 106 PISWCEMQCPKTHTKE 121 (125)
T ss_dssp EEETTEEECTTTTCCB
T ss_pred eecCCEEECCCCCCee
Confidence 5667899999999753
No 57
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.91 E-value=15 Score=18.09 Aligned_cols=13 Identities=23% Similarity=0.777 Sum_probs=9.4
Q ss_pred eec--CCCCcccccc
Q 033418 94 LVC--PETGRKFPVN 106 (119)
Q Consensus 94 L~C--~~c~~~ypI~ 106 (119)
..| +.||+.|--+
T Consensus 3 f~C~~~~C~k~F~~~ 17 (31)
T d1sp2a_ 3 FMCTWSYCGKRFTRS 17 (31)
T ss_dssp CBCCSTTCCCBCSSH
T ss_pred CCCcCCCCCcCcCCh
Confidence 357 6899999643
No 58
>d2f9yb1 c.14.1.4 (B:23-285) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, AccD {Escherichia coli [TaxId: 562]}
Probab=21.89 E-value=14 Score=26.37 Aligned_cols=19 Identities=26% Similarity=0.564 Sum_probs=14.4
Q ss_pred ccccceeecCCCCcccccc
Q 033418 88 HLEEGALVCPETGRKFPVN 106 (119)
Q Consensus 88 ~i~~g~L~C~~c~~~ypI~ 106 (119)
+..+.--+||+|++-|+++
T Consensus 16 ~l~~~~~vC~~C~~h~~lt 34 (263)
T d2f9yb1 16 ELERNLEVCPKCDHHMRMT 34 (263)
T ss_dssp HHHHTTTBCTTTCCBCCCC
T ss_pred HHHHhCCCCcCCCCCCCcC
Confidence 4555666999999998753
No 59
>d1iroa_ g.41.5.1 (A:) Rubredoxin {Clostridium pasteurianum [TaxId: 1501]}
Probab=21.77 E-value=22 Score=19.75 Aligned_cols=18 Identities=22% Similarity=0.477 Sum_probs=13.6
Q ss_pred eeecCCCCccccccCCcc
Q 033418 93 ALVCPETGRKFPVNKGIP 110 (119)
Q Consensus 93 ~L~C~~c~~~ypI~~GIP 110 (119)
..+|..||..|.=..|-|
T Consensus 3 ky~C~~CgyiYd~~~Gd~ 20 (53)
T d1iroa_ 3 KYTCTVCGYIYNPEDGDP 20 (53)
T ss_dssp CEEETTTCCEECTTTCBG
T ss_pred CeEcCCCCcEECcccCCc
Confidence 468999999997655544
No 60
>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}
Probab=21.39 E-value=13 Score=18.70 Aligned_cols=14 Identities=21% Similarity=0.368 Sum_probs=10.9
Q ss_pred eecCCCCccccccC
Q 033418 94 LVCPETGRKFPVNK 107 (119)
Q Consensus 94 L~C~~c~~~ypI~~ 107 (119)
..|..|+|.|.=+|
T Consensus 2 f~C~~C~R~FaRrD 15 (31)
T d2adra2 2 YPCGLCNRAFTRRD 15 (31)
T ss_dssp EECTTTCCEESSHH
T ss_pred cccccccchhhHHH
Confidence 47999999996544
No 61
>d1wiia_ g.41.3.4 (A:) Hypothetical UPF0222 protein MGC4549 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.76 E-value=15 Score=22.48 Aligned_cols=17 Identities=18% Similarity=0.425 Sum_probs=14.0
Q ss_pred ccceeecCCCCcccccc
Q 033418 90 EEGALVCPETGRKFPVN 106 (119)
Q Consensus 90 ~~g~L~C~~c~~~ypI~ 106 (119)
.-|.|.|..||..|...
T Consensus 44 ~~g~l~C~vCg~~~~~~ 60 (85)
T d1wiia_ 44 NTGVISCTVCLEEFQTP 60 (85)
T ss_dssp TEEEEEESSSCCEEEEE
T ss_pred CEEEEEEecCCCeEEec
Confidence 45799999999999653
No 62
>d1ibia1 g.39.1.3 (A:117-144) Cysteine-rich (intestinal) protein, CRP, CRIP {Japanese quail (Coturnix coturnix japonica), CRP2 [TaxId: 93934]}
Probab=20.63 E-value=16 Score=18.00 Aligned_cols=8 Identities=25% Similarity=0.688 Sum_probs=6.6
Q ss_pred ecCCCCcc
Q 033418 95 VCPETGRK 102 (119)
Q Consensus 95 ~C~~c~~~ 102 (119)
+||.||.+
T Consensus 3 ~CpRC~~~ 10 (28)
T d1ibia1 3 KCSRCGDS 10 (28)
T ss_dssp ECTTTSSE
T ss_pred cCcccchh
Confidence 69999875
No 63
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.58 E-value=23 Score=18.59 Aligned_cols=19 Identities=32% Similarity=0.548 Sum_probs=14.3
Q ss_pred ccccceeecCCCCcccccc
Q 033418 88 HLEEGALVCPETGRKFPVN 106 (119)
Q Consensus 88 ~i~~g~L~C~~c~~~ypI~ 106 (119)
+-.+....|+.||..|.-+
T Consensus 25 Ht~ekpy~C~~C~k~F~~~ 43 (53)
T d2csha1 25 HLGLRPYGCGVCGKKFKMK 43 (53)
T ss_dssp HSCCCSEECTTTSCEESSS
T ss_pred cccccCCcCCCcCCEecCH
Confidence 4445568999999999744
No 64
>d1brfa_ g.41.5.1 (A:) Rubredoxin {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=20.43 E-value=23 Score=19.67 Aligned_cols=18 Identities=28% Similarity=0.508 Sum_probs=13.5
Q ss_pred eeecCCCCccccccCCcc
Q 033418 93 ALVCPETGRKFPVNKGIP 110 (119)
Q Consensus 93 ~L~C~~c~~~ypI~~GIP 110 (119)
..+|+.||..|.=..|-|
T Consensus 2 ky~C~~CgyiYd~~~Gd~ 19 (53)
T d1brfa_ 2 KWVCKICGYIYDEDAGDP 19 (53)
T ss_dssp EEEETTTCCEEETTTCBG
T ss_pred ceECCCCCcEECcccCCc
Confidence 468999999997655544
No 65
>d2dsxa1 g.41.5.1 (A:1-52) Rubredoxin {Desulfovibrio gigas [TaxId: 879]}
Probab=20.12 E-value=24 Score=19.53 Aligned_cols=18 Identities=33% Similarity=0.624 Sum_probs=13.6
Q ss_pred eeecCCCCccccccCCcc
Q 033418 93 ALVCPETGRKFPVNKGIP 110 (119)
Q Consensus 93 ~L~C~~c~~~ypI~~GIP 110 (119)
.-+|+.||..|.=..|-|
T Consensus 3 ~y~C~~CgyiYdp~~Gd~ 20 (52)
T d2dsxa1 3 IYVCTVCGYEYDPAKGDP 20 (52)
T ss_dssp CEEETTTCCEECTTTCBG
T ss_pred eEEeCCCCeEECcccCCc
Confidence 468999999996666554
Done!