AmiGO: BLAST Results

Query Summary

Your job contains 1 sequence.
Parameters: Threshold: 0.001; Maximum number of alignments shown: 100; BLAST filter: on
Query Sequence

>033422
MHDFCFTIPYGLILIGGGIVGFAKKGSTASLAGGVGTGLLLVSAGYLSLKAFEKKKNSYF
AIVIETVCAALLTAVMAQRYMETSKIMPAGIVAGISALMTGFYLYKIATGGNQIPTKAE
High Scoring Gene Products


Symbol, full name	Information	P value
BLAST match view associations BLAST with AT3G20510 AT3G20510 AT3G20510	protein from Arabidopsis thaliana	2.1e-29
BLAST match view associations BLAST with AT1G50740 AT1G50740 AT1G50740	protein from Arabidopsis thaliana	8.2e-28
BLAST match view associations BLAST with AT3G57280 AT3G57280 AT3G57280	protein from Arabidopsis thaliana	1.5e-10
BLAST match view associations BLAST with AT2G26240 AT2G26240 AT2G26240	protein from Arabidopsis thaliana	3.4e-06
BLAST match view associations BLAST with TMEM14C TMEM14C TMEM14C Uncharacterized protein	protein from Gallus gallus	2.4e-05
BLAST match view associations BLAST with AT3G43520 AT3G43520 AT3G43520	protein from Arabidopsis thaliana	0.00013
BLAST match view associations BLAST with zgc:163080 zgc:163080 zgc:163080	gene_product from Danio rerio	0.00013
BLAST match view associations BLAST with tmem14c tmem14c tmem14c transmembrane protein 14C	gene_product from Danio rerio	0.00045
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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033422
        (119 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2085780 - symbol:AT3G20510 species:3702 "Arabi...   326  2.1e-29   1
TAIR|locus:2033177 - symbol:AT1G50740 "AT1G50740" species...   311  8.2e-28   1
TAIR|locus:2082578 - symbol:AT3G57280 "AT3G57280" species...   148  1.5e-10   1
TAIR|locus:2057721 - symbol:AT2G26240 species:3702 "Arabi...   107  3.4e-06   1
UNIPROTKB|F1NWB5 - symbol:TMEM14C "Uncharacterized protei...    99  2.4e-05   1
TAIR|locus:2098189 - symbol:AT3G43520 "AT3G43520" species...    97  0.00013   1
ZFIN|ZDB-GENE-070410-137 - symbol:zgc:163080 "zgc:163080"...    92  0.00013   1
ZFIN|ZDB-GENE-060825-156 - symbol:tmem14c "transmembrane ...    87  0.00045   1


>TAIR|locus:2085780 [details] [associations]
            symbol:AT3G20510 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0016020 "membrane"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] InterPro:IPR005349 Pfam:PF03647
            GO:GO:0016021 GO:GO:0005634 GO:GO:0005737 EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AP000410 HOGENOM:HOG000211932
            PANTHER:PTHR12668 eggNOG:NOG240787 OMA:YISLKAF
            ProtClustDB:CLSN2685039 EMBL:BT010505 EMBL:AK176567 EMBL:AK176851
            IPI:IPI00541215 RefSeq:NP_188687.1 UniGene:At.43873 IntAct:Q9LJU6
            STRING:Q9LJU6 PaxDb:Q9LJU6 PRIDE:Q9LJU6 EnsemblPlants:AT3G20510.1
            GeneID:821597 KEGG:ath:AT3G20510 TAIR:At3g20510 InParanoid:Q9LJU6
            PhylomeDB:Q9LJU6 Genevestigator:Q9LJU6 Uniprot:Q9LJU6
        Length = 119

 Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
 Identities = 67/119 (56%), Positives = 76/119 (63%)

Query:     1 MHDFCFTIPYXXXXXXXXXXXFAKKXXXXXXXXXXXXXXXXXXXXYLSLKAFEKKKNSYF 60
             MHDFCFTIPY           + KK                    Y+SLKAFEKKKNS  
Sbjct:     1 MHDFCFTIPYGMLLIGGGFIGYMKKGSITSFAGGAGTGLLLILAGYISLKAFEKKKNSTI 60

Query:    61 AIVIETVCAALLTAVMAQRYMETSKIMPAGIVAGISALMTGFYLYKIATGGNQIPTKAE 119
             A+V++TV AA LT VM QRY+ T KIMPAG+VAGISALMT FY+YKIATGGN+ P KAE
Sbjct:    61 AMVLQTVIAAALTLVMGQRYLLTGKIMPAGLVAGISALMTCFYVYKIATGGNKFPAKAE 119


>TAIR|locus:2033177 [details] [associations]
            symbol:AT1G50740 "AT1G50740" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0006612 "protein targeting to membrane"
            evidence=RCA] [GO:0009963 "positive regulation of flavonoid
            biosynthetic process" evidence=RCA] [GO:0010200 "response to
            chitin" evidence=RCA] [GO:0010363 "regulation of plant-type
            hypersensitive response" evidence=RCA] [GO:0030968 "endoplasmic
            reticulum unfolded protein response" evidence=RCA] [GO:0050832
            "defense response to fungus" evidence=RCA] InterPro:IPR005349
            Pfam:PF03647 GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR
            HOGENOM:HOG000211932 PANTHER:PTHR12668 OMA:WIGFAYA EMBL:AC079027
            EMBL:AY074495 EMBL:AY096728 EMBL:AY087361 IPI:IPI00518839
            PIR:C96544 RefSeq:NP_564579.1 UniGene:At.43937 STRING:Q9C6T7
            EnsemblPlants:AT1G50740.1 GeneID:841496 KEGG:ath:AT1G50740
            TAIR:At1g50740 eggNOG:NOG275159 InParanoid:Q9C6T7 PhylomeDB:Q9C6T7
            ProtClustDB:CLSN2685039 ArrayExpress:Q9C6T7 Genevestigator:Q9C6T7
            Uniprot:Q9C6T7
        Length = 119

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 64/119 (53%), Positives = 74/119 (62%)

Query:     1 MHDFCFTIPYXXXXXXXXXXXFAKKXXXXXXXXXXXXXXXXXXXXYLSLKAFEKKKNSYF 60
             MHDFCFTIPY           + KK                    ++SLKAFEKKK S  
Sbjct:     1 MHDFCFTIPYGILLIVGGFIGYLKKGSIASLAGGAGTGLLVVLAGFISLKAFEKKKTSLL 60

Query:    61 AIVIETVCAALLTAVMAQRYMETSKIMPAGIVAGISALMTGFYLYKIATGGNQIPTKAE 119
             A ++ETV AA LT VM QR+++T KIMPA +VAGISALMT FY+YKIATGGN IP KAE
Sbjct:    61 ATLLETVIAAALTFVMGQRFLQTQKIMPAALVAGISALMTCFYVYKIATGGNHIPPKAE 119


>TAIR|locus:2082578 [details] [associations]
            symbol:AT3G57280 "AT3G57280" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
            evidence=IEA] [GO:0009706 "chloroplast inner membrane"
            evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
            [GO:0009627 "systemic acquired resistance" evidence=RCA]
            [GO:0034976 "response to endoplasmic reticulum stress"
            evidence=RCA] [GO:0009536 "plastid" evidence=IDA]
            InterPro:IPR005349 Pfam:PF03647 GO:GO:0016021 EMBL:CP002686
            GO:GO:0009706 PANTHER:PTHR12668 EMBL:AY039525 EMBL:AY052733
            EMBL:AY085316 IPI:IPI00517800 RefSeq:NP_567046.1 UniGene:At.909
            IntAct:Q93V66 STRING:Q93V66 PaxDb:Q93V66 PRIDE:Q93V66
            EnsemblPlants:AT3G57280.1 GeneID:824895 KEGG:ath:AT3G57280
            TAIR:At3g57280 eggNOG:NOG268641 HOGENOM:HOG000070593
            InParanoid:Q93V66 OMA:CFGIPYG PhylomeDB:Q93V66
            ProtClustDB:CLSN2689203 Genevestigator:Q93V66 Uniprot:Q93V66
        Length = 226

 Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 38/117 (32%), Positives = 52/117 (44%)

Query:     1 MHDFCFTIPYXXXXXXXXXXXFAKKXXXXXXXXXXXXXXXXXXXXYLSLKAFEKKKNSYF 60
             +HDFCF IPY           FA                       LSLK + + K+S+ 
Sbjct:   100 IHDFCFGIPYGGLVVSGGLLGFAFSRNLTSLSTGVLYGGGLLALSTLSLKIWREGKSSFP 159

Query:    61 AIVIETVCAALLTAVMAQRYMETSKIMPAGIVAGISALMTGFYLYKIATGGNQIPTK 117
              I+ + V +A++       Y  T K+ PAG+ A ISA M  FY Y + +GGN  P K
Sbjct:   160 YILGQAVLSAVVFWKNFTAYSMTKKLFPAGVFAVISACMLCFYSYVVLSGGNPPPKK 216


>TAIR|locus:2057721 [details] [associations]
            symbol:AT2G26240 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0008150
            "biological_process" evidence=ND] [GO:0016020 "membrane"
            evidence=IEA] InterPro:IPR005349 Pfam:PF03647 GO:GO:0016021
            GO:GO:0005739 EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC004484
            HOGENOM:HOG000211932 PANTHER:PTHR12668 eggNOG:NOG240787
            EMBL:AY072431 EMBL:BT000271 IPI:IPI00538887 PIR:A84658
            RefSeq:NP_180192.1 UniGene:At.38923 STRING:O64847 PaxDb:O64847
            PRIDE:O64847 EnsemblPlants:AT2G26240.1 GeneID:817164
            KEGG:ath:AT2G26240 TAIR:At2g26240 InParanoid:O64847 OMA:RGSKISL
            PhylomeDB:O64847 ProtClustDB:CLSN2683290 Genevestigator:O64847
            GermOnline:AT2G26240 Uniprot:O64847
        Length = 108

 Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
 Identities = 22/49 (44%), Positives = 32/49 (65%)

Query:    57 NSYFAIVIETVCAALLTAVMAQRYMETSKIMPAGIVAGISALMTGFYLY 105
             N   A  I  V +A LT +M  RY+ T K++PAG+V+ +S +MTG YL+
Sbjct:    54 NPVLASSIGIVGSAALTGMMGSRYLRTRKVVPAGLVSVVSLVMTGAYLH 102


>UNIPROTKB|F1NWB5 [details] [associations]
            symbol:TMEM14C "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0016020 "membrane" evidence=IEA]
            InterPro:IPR005349 Pfam:PF03647 GO:GO:0016020
            GeneTree:ENSGT00390000013475 PANTHER:PTHR12668 OMA:RGSKISL
            EMBL:AADN02027551 IPI:IPI00586524 Ensembl:ENSGALT00000020777
            Uniprot:F1NWB5
        Length = 117

 Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 21/53 (39%), Positives = 32/53 (60%)

Query:    49 LKAFEKKKNSYFAIVIETVCAALLTAVMAQRYMETSKIMPAGIVAGISALMTG 101
             L A++  +N    + I  + +  LTAVM  R+  + K MPAG++AG+S LM G
Sbjct:    53 LGAYQLSQNPS-NVWISLITSGTLTAVMGTRFYNSGKFMPAGLIAGVSLLMVG 104


>TAIR|locus:2098189 [details] [associations]
            symbol:AT3G43520 "AT3G43520" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0016020
            "membrane" evidence=IEA] [GO:0009941 "chloroplast envelope"
            evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009536
            "plastid" evidence=IDA] InterPro:IPR005349 Pfam:PF03647
            GO:GO:0016021 EMBL:CP002686 GO:GO:0009941 PANTHER:PTHR12668
            EMBL:AY050422 EMBL:BT000533 IPI:IPI00518066 RefSeq:NP_566866.1
            UniGene:At.26578 IntAct:Q94A32 STRING:Q94A32 PRIDE:Q94A32
            EnsemblPlants:AT3G43520.1 GeneID:823438 KEGG:ath:AT3G43520
            TAIR:At3g43520 InParanoid:Q94A32 OMA:FIMTGGY
            ProtClustDB:CLSN2917363 Genevestigator:Q94A32 Uniprot:Q94A32
        Length = 240

 Score = 97 (39.2 bits), Expect = 0.00013, P = 0.00013
 Identities = 21/47 (44%), Positives = 29/47 (61%)

Query:    61 AIVIETVCAALLTAVMAQRYMETSKIMPAGIVAGISALMTGFYLYKI 107
             A  +  V A  L  VM  RYM + KI PAG+V+ +S +MTG Y++ I
Sbjct:   189 ASTVGVVMAGALMYVMGTRYMRSKKIFPAGVVSIMSFIMTGGYIHGI 235


>ZFIN|ZDB-GENE-070410-137 [details] [associations]
            symbol:zgc:163080 "zgc:163080" species:7955 "Danio
            rerio" [GO:0016020 "membrane" evidence=IEA] [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR005349 Pfam:PF03647
            ZFIN:ZDB-GENE-070410-137 GO:GO:0016020 eggNOG:NOG311488
            GeneTree:ENSGT00390000013475 HOVERGEN:HBG054211 OrthoDB:EOG45X7XT
            PANTHER:PTHR12668 EMBL:AL929536 EMBL:BC134220 IPI:IPI00845045
            RefSeq:NP_001076402.1 UniGene:Dr.117438 Ensembl:ENSDART00000140423
            Ensembl:ENSDART00000143356 GeneID:799515 KEGG:dre:799515
            InParanoid:A3KP91 OMA:GYKRKGS NextBio:20933858 Uniprot:A3KP91
        Length = 99

 Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query:    64 IETVCAALLTAVMAQRYMETSKIMPAGIVAGISALM 99
             I  + A +L AVM  R+ ++ K+MPAGI+AG+S LM
Sbjct:    57 ISLLSAGVLAAVMGMRFRKSGKLMPAGIMAGLSLLM 92


>ZFIN|ZDB-GENE-060825-156 [details] [associations]
            symbol:tmem14c "transmembrane protein 14C"
            species:7955 "Danio rerio" [GO:0016020 "membrane" evidence=IEA]
            [GO:0003674 "molecular_function" evidence=ND] [GO:0006783 "heme
            biosynthetic process" evidence=IEA;IMP] [GO:0016021 "integral to
            membrane" evidence=IEA] InterPro:IPR005349 Pfam:PF03647
            ZFIN:ZDB-GENE-060825-156 GO:GO:0016021 GO:GO:0006783
            HOGENOM:HOG000211932 PANTHER:PTHR12668 CTD:51522 eggNOG:NOG240787
            OrthoDB:EOG40VVR7 EMBL:BC122294 IPI:IPI00786744
            RefSeq:NP_001038903.1 UniGene:Dr.76391 STRING:Q0P436 GeneID:751728
            KEGG:dre:751728 NextBio:20917868 ArrayExpress:Q0P436 Uniprot:Q0P436
        Length = 107

 Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
 Identities = 21/57 (36%), Positives = 31/57 (54%)

Query:    62 IVIETVCAALLTAVMAQRYMETSKIMPAGIVAGISALMTGFYLYKIATGGNQIPTKA 118
             I +    +  L A+M +R+  + KI PAG++AG S LM    L K+  G  Q P K+
Sbjct:    55 IWVSLAASGTLAAIMGKRFYNSRKITPAGLIAGASVLM----LAKLGAGMLQKPQKS 107


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.136   0.393    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      119        88   0.00091  102 3  11 22  0.38    29
                                                     29  0.49    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  510 (54 KB)
  Total size of DFA:  92 KB (2067 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.12u 0.17s 8.29t   Elapsed:  00:00:00
  Total cpu time:  8.12u 0.17s 8.29t   Elapsed:  00:00:00
  Start:  Sat May 11 02:39:07 2013   End:  Sat May 11 02:39:07 2013
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the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data
