BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033430
MAAASLKFICLVGLLLVVNIATFATVNGAGECGKSSPVDEALKLAPCAAAAQDEKASVSA
SCCAQVKRIGQNPICLCAVLLSDTAKASGVNPQVAMSIPKRCNFANRPVGYKCGPYTLP

High Scoring Gene Products

Symbol, full name Information P value
AT3G53980 protein from Arabidopsis thaliana 9.2e-36
AT5G05960 protein from Arabidopsis thaliana 3.4e-29
AT2G37870 protein from Arabidopsis thaliana 6.5e-19
DIR1
DEFECTIVE IN INDUCED RESISTANCE 1
protein from Arabidopsis thaliana 0.00021
AT3G22600 protein from Arabidopsis thaliana 0.00023
AT5G48490 protein from Arabidopsis thaliana 0.00045

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033430
        (119 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2084520 - symbol:AT3G53980 species:3702 "Arabi...   386  9.2e-36   1
TAIR|locus:2153619 - symbol:AT5G05960 species:3702 "Arabi...   324  3.4e-29   1
TAIR|locus:2065634 - symbol:AT2G37870 species:3702 "Arabi...   227  6.5e-19   1
TAIR|locus:505006681 - symbol:DIR1 "DEFECTIVE IN INDUCED ...    90  0.00021   1
TAIR|locus:2077001 - symbol:AT3G22600 species:3702 "Arabi...    91  0.00023   1
TAIR|locus:2166014 - symbol:AT5G48490 species:3702 "Arabi...    87  0.00045   1


>TAIR|locus:2084520 [details] [associations]
            symbol:AT3G53980 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0006869 "lipid
            transport" evidence=ISS] [GO:0008289 "lipid binding" evidence=ISS]
            EMBL:CP002686 GO:GO:0006869 InterPro:IPR016140 SMART:SM00499
            SUPFAM:SSF47699 EMBL:AL132960 Pfam:PF14368 EMBL:BT002445
            EMBL:BT006519 IPI:IPI00521482 PIR:T45938 RefSeq:NP_190966.1
            RefSeq:NP_850700.1 UniGene:At.1411 ProteinModelPortal:Q9M329
            SMR:Q9M329 IntAct:Q9M329 STRING:Q9M329 PRIDE:Q9M329
            EnsemblPlants:AT3G53980.1 EnsemblPlants:AT3G53980.2 GeneID:824565
            KEGG:ath:AT3G53980 TAIR:At3g53980 HOGENOM:HOG000240789
            InParanoid:Q9M329 OMA:DNEAMKL PhylomeDB:Q9M329
            ProtClustDB:CLSN2685066 ArrayExpress:Q9M329 Genevestigator:Q9M329
            Uniprot:Q9M329
        Length = 114

 Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
 Identities = 70/117 (59%), Positives = 88/117 (75%)

Query:     3 AASLKFICLVGLLLVVNIATFATVNGAGECGKSSPVDEXXXXXXXXXXXQDEKASVSASC 62
             AAS+KF+C++GL+L++       V+GAGECG+SSP +E           QD  ++V   C
Sbjct:     2 AASMKFLCILGLILLIG----TVVDGAGECGRSSPDNEAMKLAPCAGAAQDANSAVPGGC 57

Query:    63 CAQVKRIGQNPICLCAVLLSDTAKASGVNPQVAMSIPKRCNFANRPVGYKCGPYTLP 119
             C Q+KR  QNP CLCA+LLSDTAKASGV+P+VA++IPKRCNFANRPVGYKCG YTLP
Sbjct:    58 CTQIKRFSQNPKCLCAILLSDTAKASGVDPEVALTIPKRCNFANRPVGYKCGAYTLP 114


>TAIR|locus:2153619 [details] [associations]
            symbol:AT5G05960 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0006869 "lipid
            transport" evidence=ISS] [GO:0008289 "lipid binding" evidence=ISS]
            EMBL:CP002688 GO:GO:0006869 InterPro:IPR016140 SMART:SM00499
            SUPFAM:SSF47699 Pfam:PF14368 UniGene:At.43072 UniGene:At.66777
            EMBL:AY086919 EMBL:BT024550 IPI:IPI00526394 RefSeq:NP_568160.1
            ProteinModelPortal:Q8LBY9 SMR:Q8LBY9 STRING:Q8LBY9 PRIDE:Q8LBY9
            EnsemblPlants:AT5G05960.1 GeneID:830481 KEGG:ath:AT5G05960
            TAIR:At5g05960 eggNOG:NOG262474 InParanoid:Q8LBY9 OMA:KRCAIAN
            PhylomeDB:Q8LBY9 ProtClustDB:CLSN2917576 Genevestigator:Q8LBY9
            Uniprot:Q8LBY9
        Length = 116

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 62/106 (58%), Positives = 76/106 (71%)

Query:    15 LLVVNIATFAT-VNGAGECGKSSPVDEXXXXXXXXXXXQDEKASVSASCCAQVKRIGQNP 73
             LLV+ I +  T V GAGECG++ P  E           QD  A VSA CCA+VK++GQNP
Sbjct:    11 LLVLCIYSLKTMVYGAGECGRNPPDREAIKLAPCAMAAQDTSAKVSAICCARVKQMGQNP 70

Query:    74 ICLCAVLLSDTAKASGVNPQVAMSIPKRCNFANRPVGYKCGPYTLP 119
              CLCAV+LS TA++SG  P+++M+IPKRCN ANRPVGYKCG YTLP
Sbjct:    71 KCLCAVMLSSTARSSGAKPEISMTIPKRCNIANRPVGYKCGAYTLP 116


>TAIR|locus:2065634 [details] [associations]
            symbol:AT2G37870 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0006869 "lipid
            transport" evidence=IEA;ISS] [GO:0008289 "lipid binding"
            evidence=IEA;ISS] [GO:0009506 "plasmodesma" evidence=IDA]
            InterPro:IPR000528 PRINTS:PR00382 Pfam:PF00234 GO:GO:0009506
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006869
            InterPro:IPR016140 SMART:SM00499 SUPFAM:SSF47699 GO:GO:0006508
            GO:GO:0008289 GO:GO:0008233 HOGENOM:HOG000240789 EMBL:AY054635
            EMBL:AY072489 IPI:IPI00542600 PIR:B84798 RefSeq:NP_565872.1
            UniGene:At.26453 ProteinModelPortal:Q9SHA0 SMR:Q9SHA0 PaxDb:Q9SHA0
            PRIDE:Q9SHA0 EnsemblPlants:AT2G37870.1 GeneID:818363
            KEGG:ath:AT2G37870 TAIR:At2g37870 eggNOG:NOG256054
            InParanoid:Q9SHA0 OMA:CCAKVGA PhylomeDB:Q9SHA0
            ProtClustDB:CLSN2917260 ArrayExpress:Q9SHA0 Genevestigator:Q9SHA0
            Uniprot:Q9SHA0
        Length = 115

 Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
 Identities = 45/115 (39%), Positives = 69/115 (60%)

Query:     7 KFICLVGLLLVVNIATFATVNGAGECGKSSPVDEXXXXXXXXX-XXQDEKASVSASCCAQ 65
             KF+ +  + L++++A+   V  AGECG+  P+++            ++ +  V   CCA+
Sbjct:     5 KFVAVALMSLLISLAS---VEAAGECGRM-PINQAAASLSPCLPATKNPRGKVPPVCCAK 60

Query:    66 VKR-IGQNPICLCAVLLSDTAKASGVNPQVAMSIPKRCNFANRPVGYKCGPYTLP 119
             V   I  NP CLCAV+LS  AK +G+NP +A+ +PKRCN  NRP G +CG Y +P
Sbjct:    61 VGALIRTNPRCLCAVMLSPLAKKAGINPGIAIGVPKRCNIRNRPAGKRCGRYIVP 115


>TAIR|locus:505006681 [details] [associations]
            symbol:DIR1 "DEFECTIVE IN INDUCED RESISTANCE 1"
            species:3702 "Arabidopsis thaliana" [GO:0005576 "extracellular
            region" evidence=ISM] [GO:0006869 "lipid transport" evidence=ISS]
            [GO:0008289 "lipid binding" evidence=ISS] [GO:0005319 "lipid
            transporter activity" evidence=ISS] [GO:0009862 "systemic acquired
            resistance, salicylic acid mediated signaling pathway"
            evidence=IMP] [GO:0005504 "fatty acid binding" evidence=IDA]
            [GO:0008270 "zinc ion binding" evidence=IDA] EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0006869 InterPro:IPR016140
            SMART:SM00499 SUPFAM:SSF47699 GO:GO:0046872 GO:GO:0048046
            GO:GO:0008270 GO:GO:0005504 GO:GO:0009862 EMBL:AB020745
            EMBL:AF342726 EMBL:AY062857 EMBL:BT006510 EMBL:AY085224
            IPI:IPI00525511 RefSeq:NP_568699.1 UniGene:At.27209 PDB:2RKN
            PDBsum:2RKN ProteinModelPortal:Q8W453 SMR:Q8W453 PaxDb:Q8W453
            PRIDE:Q8W453 EnsemblPlants:AT5G48485.1 GeneID:834904
            KEGG:ath:AT5G48485 TAIR:At5g48485 eggNOG:NOG297830
            HOGENOM:HOG000242259 InParanoid:Q8W453 OMA:LANAPTC PhylomeDB:Q8W453
            ProtClustDB:CLSN2686599 EvolutionaryTrace:Q8W453
            Genevestigator:Q8W453 Pfam:PF14368 Uniprot:Q8W453
        Length = 102

 Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
 Identities = 28/103 (27%), Positives = 47/103 (45%)

Query:     7 KFICLVGLLLVVNIATFATVNGAGE-CGKSSPVDEXXXXXXXXXXXQDEKASVSASCCAQ 65
             K   +V + ++V +A     + A + CG S   DE           ++   S S  CC  
Sbjct:     4 KKAAMVMMAMIVIMAMLVDTSVAIDLCGMSQ--DELNECKPAVS--KENPTSPSQPCCTA 59

Query:    66 VKRIGQNPICLCAVLLSDTAKASGVNPQVAMSIPKRCNFANRP 108
             ++    +  CLC    S    + GV+P++A ++PK+C  AN P
Sbjct:    60 LQHA--DFACLCGYKNSPWLGSFGVDPELASALPKQCGLANAP 100


>TAIR|locus:2077001 [details] [associations]
            symbol:AT3G22600 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0006869 "lipid
            transport" evidence=IEA;ISS] [GO:0008289 "lipid binding"
            evidence=IEA;ISS] [GO:0031225 "anchored to membrane" evidence=TAS]
            [GO:0010167 "response to nitrate" evidence=RCA] [GO:0015706
            "nitrate transport" evidence=RCA] InterPro:IPR000528 PRINTS:PR00382
            EMBL:CP002686 GO:GO:0006869 InterPro:IPR016140 SMART:SM00499
            SUPFAM:SSF47699 GO:GO:0031225 GO:GO:0008289 Pfam:PF14368
            EMBL:AP000731 HOGENOM:HOG000240487 EMBL:AY045650 EMBL:AY079122
            EMBL:AB246327 IPI:IPI00533791 RefSeq:NP_566712.1 UniGene:At.20064
            HSSP:P07597 ProteinModelPortal:Q9LJ86 SMR:Q9LJ86 PRIDE:Q9LJ86
            EnsemblPlants:AT3G22600.1 GeneID:821832 KEGG:ath:AT3G22600
            TAIR:At3g22600 InParanoid:Q9LJ86 OMA:ISRCNAS PhylomeDB:Q9LJ86
            ProtClustDB:CLSN2688672 Genevestigator:Q9LJ86 Uniprot:Q9LJ86
        Length = 170

 Score = 91 (37.1 bits), Expect = 0.00023, P = 0.00023
 Identities = 21/59 (35%), Positives = 31/59 (52%)

Query:    57 SVSASCCAQVKRIGQN-PICLCAVLLSDTAKAS-GVNPQVAMSIPKRCNFANRPVGYKC 113
             S +  CC Q+ R+ Q+ P CLC VL    ++    VN   A+ +P+ CN    PV  +C
Sbjct:    48 SPNQQCCNQLSRVVQSSPDCLCQVLNGGGSQLGINVNQTQALGLPRACNVQTPPVS-RC 105


>TAIR|locus:2166014 [details] [associations]
            symbol:AT5G48490 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0006869 "lipid
            transport" evidence=ISS] [GO:0008289 "lipid binding" evidence=ISS]
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006869
            InterPro:IPR016140 SMART:SM00499 SUPFAM:SSF47699 EMBL:AB020745
            HOGENOM:HOG000242259 ProtClustDB:CLSN2686599 Pfam:PF14368
            EMBL:AY087218 EMBL:BT025701 IPI:IPI00540879 RefSeq:NP_199660.1
            UniGene:At.29845 ProteinModelPortal:Q9LV65 SMR:Q9LV65 STRING:Q9LV65
            PRIDE:Q9LV65 EnsemblPlants:AT5G48490.1 GeneID:834905
            KEGG:ath:AT5G48490 TAIR:At5g48490 InParanoid:Q9LV65 OMA:CGMANED
            PhylomeDB:Q9LV65 Genevestigator:Q9LV65 Uniprot:Q9LV65
        Length = 101

 Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
 Identities = 19/57 (33%), Positives = 28/57 (49%)

Query:    52 QDEKASVSASCCAQVKRIGQNPICLCAVLLSDTAKASGVNPQVAMSIPKRCNFANRP 108
             ++   S S  CC  +K       CLC    S    + GV+P++A S+PK C+  N P
Sbjct:    45 KNNPTSPSLLCCNALKHADYT--CLCGYKNSPWLGSFGVDPKLASSLPKECDLTNAP 99


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.133   0.407    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      119       108   0.00091  102 3  11 22  0.42    30
                                                     29  0.40    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  506 (54 KB)
  Total size of DFA:  104 KB (2073 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.08u 0.15s 9.23t   Elapsed:  00:00:00
  Total cpu time:  9.08u 0.15s 9.23t   Elapsed:  00:00:00
  Start:  Sat May 11 03:01:01 2013   End:  Sat May 11 03:01:01 2013

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