BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033430
(119 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8W453|DIR1_ARATH Putative lipid-transfer protein DIR1 OS=Arabidopsis thaliana
GN=DIR1 PE=1 SV=1
Length = 102
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 32 CGKSSPVDEALKLAPCAAAAQDEKASVSASCCAQVKRIGQNPICLCAVLLSDTAKASGVN 91
CG S DE + P A +++ S S CC ++ + CLC S + GV+
Sbjct: 30 CGMSQ--DELNECKP--AVSKENPTSPSQPCCTALQHA--DFACLCGYKNSPWLGSFGVD 83
Query: 92 PQVAMSIPKRCNFANRPV 109
P++A ++PK+C AN P
Sbjct: 84 PELASALPKQCGLANAPT 101
>sp|Q9FFY3|VAS_ARATH Lipid transfer-like protein VAS OS=Arabidopsis thaliana GN=VAS PE=2
SV=1
Length = 151
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 12/108 (11%)
Query: 6 LKFICLVGLLLVVNIATFATVNGAGECGKSSPVDEALKLAPCAAAAQDEKASVSASCCAQ 65
+KF +LL+V ++ +NG V +LAPC K V CC
Sbjct: 5 MKFFSFYVVLLLVAASSGMRINGQS-------VSCLNQLAPCLNYLNGTK-EVPQVCCNP 56
Query: 66 VKR-IGQNPICLCAVL---LSDTAKASGVNPQVAMSIPKRCNFANRPV 109
+K I NP CLC ++ S A+ +G++ A +P RC P+
Sbjct: 57 LKSVIRNNPECLCRMISNRWSSQAERAGIDVNDAQMLPARCGEHVNPI 104
>sp|Q43871|NLTP8_HORVU Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare GN=CW18
PE=1 SV=1
Length = 115
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 50/125 (40%), Gaps = 32/125 (25%)
Query: 2 AAASLKFICLVGLLLVVNIATFATVNGAGECGKSSPVDEALKLAPCAAAAQDEKASVSAS 61
AA L + LV +L+V + A CG+ S L PCAA A+ S SA
Sbjct: 5 AATKLALVALVAAMLLV------AADAAITCGQVSSA-----LGPCAAYAKGSGTSPSAG 53
Query: 62 CCAQVKRIG--------QNPICLCAVLLSDTAKASGVNPQVAMSIPKRCNFANRPVGYKC 113
CC+ VKR+ + C C L A A N A IP RC +
Sbjct: 54 CCSGVKRLAGLARSTADKQATCRC---LKSVAGA--YNAGRAAGIPSRCGVSV------- 101
Query: 114 GPYTL 118
PYT+
Sbjct: 102 -PYTI 105
>sp|Q9LLR7|NLTP3_ARATH Non-specific lipid-transfer protein 3 OS=Arabidopsis thaliana
GN=LTP3 PE=3 SV=1
Length = 115
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 51/114 (44%), Gaps = 23/114 (20%)
Query: 1 MAAASLKFICLVGLLLVVNIATFATVNGAGECGKSSPVDEALKLAPCAAAAQDEKASVSA 60
MA A F CLV + + A+V+ A CG A LAPCA + V
Sbjct: 1 MAFALRFFTCLV-----LTVCIVASVDAAISCG-----TVAGSLAPCATYL-SKGGLVPP 49
Query: 61 SCCAQVKRIG--------QNPICLCAVLLSDTAKA-SGVNPQVAMSIPKRCNFA 105
SCCA VK + + C C + TAK+ SG+NP +A +P +C +
Sbjct: 50 SCCAGVKTLNSMAKTTPDRQQACRC---IQSTAKSISGLNPSLASGLPGKCGVS 100
>sp|O04403|NLT22_PARJU Probable non-specific lipid-transfer protein 2 OS=Parietaria
judaica PE=1 SV=1
Length = 133
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 11/85 (12%)
Query: 28 GAGECGKSSPVDEALKLAPCAAAAQDEKASVSASCCAQVKRIGQNPICL------CAVLL 81
G G CGK + PC + E+ S SCC+ K++ + C ++
Sbjct: 31 GEGPCGKV-----VHHIMPCLKFVKGEEKEPSKSCCSGTKKLSEEVKTTEQKREACKCIV 85
Query: 82 SDTAKASGVNPQVAMSIPKRCNFAN 106
+ T SG+ ++ +PK+C
Sbjct: 86 AATKGISGIKNELVAEVPKKCGITT 110
>sp|Q95LZ5|TTC16_MACFA Tetratricopeptide repeat protein 16 OS=Macaca fascicularis GN=TTC16
PE=2 SV=1
Length = 872
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Query: 40 EALKLAPCAAAAQDEKASVSASCCAQVKRIGQNPICLCAVLLSDTAKASGVNPQVAMSIP 99
+AL + AA Q EKA C A + + Q+P CL L+++ K N V +
Sbjct: 154 DALNVFSHAAELQPEKACFRYRCMACLLALEQHPACLS--LITEELKQDTTNADVYILRA 211
Query: 100 KRCNFANRP 108
+ NF +P
Sbjct: 212 RLYNFLQKP 220
>sp|P19656|NLTP_MAIZE Non-specific lipid-transfer protein OS=Zea mays PE=1 SV=1
Length = 120
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 41 ALKLAPCAAAAQDEKASVSASCCAQVK------RIGQNPICLCAVLLSDTAKASGVNPQV 94
A +APC + A+ + + SA CC+ V+ R + C L + A SG+N
Sbjct: 35 ASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGN 94
Query: 95 AMSIPKRCNFA 105
A SIP +C +
Sbjct: 95 AASIPSKCGVS 105
>sp|Q11HV9|ISPDF_MESSB Bifunctional enzyme IspD/IspF OS=Mesorhizobium sp. (strain BNC1)
GN=ispDF PE=3 SV=1
Length = 408
Score = 29.6 bits (65), Expect = 5.7, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 66 VKRIGQNPICLCAVLLSDTAKASGVNPQVAMSIPKRCNFANR-PVGYKCGP 115
++ +G++ L A+ +SDT K SGVN + ++P+ FA + P G+ P
Sbjct: 132 IEAVGEDSGALPALPVSDTLKRSGVNGIITGTVPRDGLFAAQTPQGFPFRP 182
>sp|Q6ASY2|NLTL1_ORYSJ Non-specific lipid transfer protein-like 1 OS=Oryza sativa subsp.
japonica GN=LTPL1 PE=1 SV=1
Length = 178
Score = 28.9 bits (63), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 46/103 (44%), Gaps = 18/103 (17%)
Query: 15 LLVVNIATFATVNGAGECGKSSP-----VD---EALKLAPCAAAAQDEKASVSAS---CC 63
LLVV +A A V+GA SSP VD EALKLA C K + S CC
Sbjct: 13 LLVVGLAAVAGVDGATA---SSPAPAPAVDCTAEALKLADCLDYVTPGKTAPSRPSKLCC 69
Query: 64 AQVKRIGQNPI---CLCAVLLSDTAKASGVNPQVAMSIPKRCN 103
+VK ++ CLCA S T +N A+ +P C
Sbjct: 70 GEVKGALKDSAAVGCLCAAFTSKTLPLP-INITRALHLPAACG 111
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.132 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,017,280
Number of Sequences: 539616
Number of extensions: 1263162
Number of successful extensions: 3014
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 3004
Number of HSP's gapped (non-prelim): 48
length of query: 119
length of database: 191,569,459
effective HSP length: 86
effective length of query: 33
effective length of database: 145,162,483
effective search space: 4790361939
effective search space used: 4790361939
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)