Query 033430
Match_columns 119
No_of_seqs 151 out of 998
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 13:47:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033430.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/033430hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd04660 nsLTP_like nsLTP_like: 99.7 1.3E-17 2.9E-22 104.8 4.6 66 42-113 6-73 (73)
2 PF14368 LTP_2: Probable lipid 99.7 1.1E-17 2.4E-22 108.9 0.9 69 42-113 24-96 (96)
3 cd01959 nsLTP2 nsLTP2: Non-spe 99.6 7.3E-16 1.6E-20 95.3 4.9 61 42-108 4-64 (66)
4 cd01960 nsLTP1 nsLTP1: Non-spe 99.6 4.5E-16 9.7E-21 101.0 3.4 78 31-113 2-88 (89)
5 cd00010 AAI_LTSS AAI_LTSS: Alp 99.6 1.9E-15 4E-20 91.9 3.7 61 44-104 1-63 (63)
6 smart00499 AAI Plant lipid tra 99.2 3.3E-11 7.1E-16 74.6 4.6 69 42-113 6-79 (79)
7 PF00234 Tryp_alpha_amyl: Prot 98.9 8.4E-11 1.8E-15 75.8 -3.2 68 42-113 13-90 (90)
8 cd01958 HPS_like HPS_like: Hyd 97.2 0.00056 1.2E-08 44.1 3.7 68 42-113 9-85 (85)
9 PF14547 Hydrophob_seed: Hydro 97.0 0.00021 4.6E-09 46.1 0.6 72 42-114 7-85 (85)
10 PF07172 GRP: Glycine rich pro 89.4 0.34 7.4E-06 31.8 2.4 13 3-15 1-13 (95)
11 cd00261 AAI_SS AAI_SS: Alpha-A 79.6 0.62 1.3E-05 30.6 0.1 62 42-105 13-103 (110)
12 PF05617 Prolamin_like: Prolam 52.5 16 0.00034 21.8 2.4 21 56-78 26-46 (70)
13 PF04202 Mfp-3: Foot protein 3 37.5 31 0.00068 21.2 2.0 19 3-21 1-19 (71)
14 PF10868 DUF2667: Protein of u 22.7 42 0.00091 21.8 0.8 9 72-80 72-80 (90)
No 1
>cd04660 nsLTP_like nsLTP_like: Non-specific lipid-transfer protein (nsLTP)-like subfamily; composed of predominantly uncharacterized proteins with similarity to nsLTPs, including Medicago truncatula MtN5, the root-specific Phaseolus vulgaris PVR3, Antirrhinum majus FIL1, and Lilium longiflorum LIM3. Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. The MtN5 gene is induced during root nodule development. FIL1 is thought to be important in petal and stamen formation. The LIM3 gene is induced during the early prophase stage of meiosis in lily microsporocytes.
Probab=99.70 E-value=1.3e-17 Score=104.77 Aligned_cols=66 Identities=27% Similarity=0.558 Sum_probs=56.6
Q ss_pred cccccCHHHhhCCC--CCCCHHHHHHHHhhcCCCCccceeccccccccCCCChHHHhhhhhhcCCCCCCCCCCC
Q 033430 42 LKLAPCAAAAQDEK--ASVSASCCAQVKRIGQNPICLCAVLLSDTAKASGVNPQVAMSIPKRCNFANRPVGYKC 113 (119)
Q Consensus 42 ~~L~pC~~yv~~~~--~~Ps~~CC~~vk~l~~~~~ClC~~~~~~~~~~~~i~~~~a~~lP~~Cgv~~~p~g~~C 113 (119)
..|.||++|+++++ .+||++||++||++ +..|+|.+++... ..+||.++|.+||++||++ +|+ ++|
T Consensus 6 ~~L~~C~~yl~~~~~~~~Ps~~CC~~vk~~--~~~C~C~~~~~~~--~~~i~~~~a~~Lp~~Cgv~-~p~-~~C 73 (73)
T cd04660 6 DLLAECQPYVTGPNPPPPPSRECCAALRRA--DLPCLCRYKTSLV--LQIIDPDKAVYLPAKCGLP-LPP-SSC 73 (73)
T ss_pred HHHHHHHHHHcCCCCCCCCCHHHHHHHHcC--CcCCEeeccCCCc--ccccCHHHHHHHHHHcCCC-CCC-CCC
Confidence 68999999999766 36999999999996 6779999987542 2359999999999999999 888 888
No 2
>PF14368 LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A 1TUK_A.
Probab=99.67 E-value=1.1e-17 Score=108.87 Aligned_cols=69 Identities=33% Similarity=0.677 Sum_probs=47.4
Q ss_pred cccccC---HHHhhCCCCCCCHHHHHHHHhhc-CCCCccceeccccccccCCCChHHHhhhhhhcCCCCCCCCCCC
Q 033430 42 LKLAPC---AAAAQDEKASVSASCCAQVKRIG-QNPICLCAVLLSDTAKASGVNPQVAMSIPKRCNFANRPVGYKC 113 (119)
Q Consensus 42 ~~L~pC---~~yv~~~~~~Ps~~CC~~vk~l~-~~~~ClC~~~~~~~~~~~~i~~~~a~~lP~~Cgv~~~p~g~~C 113 (119)
.+|.|| ..|++++ .+||++||+++|++. ++..|||.++++.....++||.+++.+||++||++ +|+ ++|
T Consensus 24 ~~l~~c~~~~~~~~~~-~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~~~~~~in~~~a~~Lp~~Cg~~-~~~-~~C 96 (96)
T PF14368_consen 24 NSLLPCCPCLCYVTGG-PAPSAACCSALKSVVQADPPCLCQLLNSPGAPGFGINVTRALALPAACGVP-VPP-SKC 96 (96)
T ss_dssp CCCCHH--HHHHHCC------HHHHHHHCC----HCCHHHCCCC-CCHCHHCCTCHHHHHHHHHCTSS--S-----
T ss_pred HHHhccccchhccCCC-CCCCHHHHHHHHHhccCCCCCHHHhcCccccccCCcCHHHHHHHHHHcCCC-CCC-CCC
Confidence 356666 7888744 489999999999975 68999999998765456789999999999999999 777 787
No 3
>cd01959 nsLTP2 nsLTP2: Non-specific lipid-transfer protein type 2 (nsLTP2) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. nsLTP2 can bind lipids and sterols. Structure studies of rice nsLTPs show that the plasticity of the hydrophobic cavity is an important factor in ligand binding. The flexibility of the sLTP2 cavity allows its binding to rigid sterol molecules, whereas nsLTP1 cannot bind sterols despite its larger cavity size. The resulting nsLTP2/sterol complexes may bind to receptors that trigger defense responses. nsLTP2 gene exp
Probab=99.61 E-value=7.3e-16 Score=95.28 Aligned_cols=61 Identities=31% Similarity=0.580 Sum_probs=54.2
Q ss_pred cccccCHHHhhCCCCCCCHHHHHHHHhhcCCCCccceeccccccccCCCChHHHhhhhhhcCCCCCC
Q 033430 42 LKLAPCAAAAQDEKASVSASCCAQVKRIGQNPICLCAVLLSDTAKASGVNPQVAMSIPKRCNFANRP 108 (119)
Q Consensus 42 ~~L~pC~~yv~~~~~~Ps~~CC~~vk~l~~~~~ClC~~~~~~~~~~~~i~~~~a~~lP~~Cgv~~~p 108 (119)
.+|.+|++|++++. +||++||+.||+ +..|||.|++++..+.+ ||.++|++||++||++ +|
T Consensus 4 ~~L~~C~~ai~~~~-~Ps~~CC~~Lk~---~~~CLC~y~~~p~l~~~-i~~~~A~~l~~~Cgv~-~P 64 (66)
T cd01959 4 TQLSPCLPAILGGS-PPSAACCAKLKE---QQSCLCQYAKNPSLKQY-VNSPNARKVLAACGVP-YP 64 (66)
T ss_pred hhcccCHHHHhCCC-CCCHHHHHHHhc---CCCCeeeeecCccHHhh-cCcHHHHHHHHHcCCC-CC
Confidence 68999999999764 899999999999 56999999988766666 8999999999999999 65
No 4
>cd01960 nsLTP1 nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans.
Probab=99.60 E-value=4.5e-16 Score=100.96 Aligned_cols=78 Identities=31% Similarity=0.613 Sum_probs=58.0
Q ss_pred CCCCCCccccccccccCHHHhhCCCCCCCHHHHHHHHhhcC------CCCccceeccccccccCCCChHHHhhhhhhcCC
Q 033430 31 ECGKSSPVDEALKLAPCAAAAQDEKASVSASCCAQVKRIGQ------NPICLCAVLLSDTAKASGVNPQVAMSIPKRCNF 104 (119)
Q Consensus 31 ~C~~~~~~~~~~~L~pC~~yv~~~~~~Ps~~CC~~vk~l~~------~~~ClC~~~~~~~~~~~~i~~~~a~~lP~~Cgv 104 (119)
+|.++. ..|.||++|+++++..|+++||++++++++ +..|+|..+.+......+||.++|.+||++||+
T Consensus 2 ~C~~v~-----~~l~~C~~y~~g~~~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~C~~~~~~~~~~i~~~~a~~LP~~C~v 76 (89)
T cd01960 2 SCGQVT-----SLLAPCLGYLTGGGPAPSPACCSGVKSLNGLAKTTADRQAACNCLKSAAAGISGLNPGRAAGLPGKCGV 76 (89)
T ss_pred CHHHHH-----hhHHhHHHHHhCCCCCCChHHhhhhHHHhhccCCCCchhhhhhcccccccccCCCCHHHHHhChHhccc
Confidence 466554 789999999998777899999999999861 334555555443334445999999999999999
Q ss_pred CC-CC--CCCCC
Q 033430 105 AN-RP--VGYKC 113 (119)
Q Consensus 105 ~~-~p--~g~~C 113 (119)
+. +| ..+.|
T Consensus 77 ~~~~~i~~~~dC 88 (89)
T cd01960 77 SIPYPISPSTDC 88 (89)
T ss_pred CCCCCCCCCCCC
Confidence 85 33 45555
No 5
>cd00010 AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins. Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges.
Probab=99.57 E-value=1.9e-15 Score=91.89 Aligned_cols=61 Identities=31% Similarity=0.693 Sum_probs=52.9
Q ss_pred cccCHHHhhCCCCCCCHHHHHHHHhhc-CCCCccceeccccccccCCC-ChHHHhhhhhhcCC
Q 033430 44 LAPCAAAAQDEKASVSASCCAQVKRIG-QNPICLCAVLLSDTAKASGV-NPQVAMSIPKRCNF 104 (119)
Q Consensus 44 L~pC~~yv~~~~~~Ps~~CC~~vk~l~-~~~~ClC~~~~~~~~~~~~i-~~~~a~~lP~~Cgv 104 (119)
|.||++|+++++..||++||+++++++ .+..|+|.++++.....+++ |.+++..||++||+
T Consensus 1 L~~C~~y~~~~~~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~~~~~~~~~~~~a~~LP~~Cgv 63 (63)
T cd00010 1 LAPCLSYLTGGATAPPSDCCSGLKSVVKSDPKCLCAALNGPGASLLGLKNATRALALPAACGL 63 (63)
T ss_pred CcchHHHHcCCCCCCChHHHHHHHHHHhcChhhHHHHHcCccccccCcccHHHHHhchHhcCC
Confidence 579999999876689999999999986 57899999998766555566 79999999999996
No 6
>smart00499 AAI Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family.
Probab=99.18 E-value=3.3e-11 Score=74.59 Aligned_cols=69 Identities=32% Similarity=0.618 Sum_probs=54.5
Q ss_pred cccccCHHHhhCC--CCCCCHHHHHHHHhhcCCCCccceeccccccccCC---CChHHHhhhhhhcCCCCCCCCCCC
Q 033430 42 LKLAPCAAAAQDE--KASVSASCCAQVKRIGQNPICLCAVLLSDTAKASG---VNPQVAMSIPKRCNFANRPVGYKC 113 (119)
Q Consensus 42 ~~L~pC~~yv~~~--~~~Ps~~CC~~vk~l~~~~~ClC~~~~~~~~~~~~---i~~~~a~~lP~~Cgv~~~p~g~~C 113 (119)
..+.+|.+|+++. ...|+.+||++++.+. +..|+|..+........+ ++..++..||+.||+. .+. +.|
T Consensus 6 ~~~~~c~~~~~~~~~~~~p~~~CC~~l~~~~-~~~C~C~~~~~~~~~~~~~~~~~~~~a~~lp~~C~~~-~~~-~~C 79 (79)
T smart00499 6 LQLAPCLSYLTGGSPGAPPSQQCCSQLRGLN-SAQCRCLALRAAVLGILEIPGVNAQNAASLPSACGVP-PPY-TDC 79 (79)
T ss_pred hhHHhhHHHHcCCCCCCCCchHHHHHHHHhc-ccCCcchhhhcccccccchhhhhHHHHHhhHHhcCCC-CCC-CCC
Confidence 5677999999876 4578999999999974 788999988754333332 5899999999999999 554 444
No 7
>PF00234 Tryp_alpha_amyl: Protease inhibitor/seed storage/LTP family This is a small subfamily; InterPro: IPR003612 This domain is found is several proteins, including plant lipid transfer proteins [], seed storage proteins [] and trypsin-alpha amylase inhibitors [, ]. The domain forms a four-helical bundle in a right-handed superhelix with a folded leaf topology, which is stabilised by disulphide bonds, and which has an internal cavity. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; PDB: 1BFA_A 1BEA_A 1MID_A 1BE2_A 1LIP_A 3GSH_A 1JTB_A 1UVC_B 1BV2_A 1UVB_A ....
Probab=98.86 E-value=8.4e-11 Score=75.75 Aligned_cols=68 Identities=26% Similarity=0.631 Sum_probs=54.6
Q ss_pred cccccCHHHhhCCCCCCCHHHHHHHHhhcCCCCccceecccccccc----------CCCChHHHhhhhhhcCCCCCCCCC
Q 033430 42 LKLAPCAAAAQDEKASVSASCCAQVKRIGQNPICLCAVLLSDTAKA----------SGVNPQVAMSIPKRCNFANRPVGY 111 (119)
Q Consensus 42 ~~L~pC~~yv~~~~~~Ps~~CC~~vk~l~~~~~ClC~~~~~~~~~~----------~~i~~~~a~~lP~~Cgv~~~p~g~ 111 (119)
..+.+|..|++++...|+..||++|+++ +..|.|..+....... .+++..+|..||+.||++ .|. +
T Consensus 13 ~~l~~c~~~~~~~~~~~~~~CC~~L~~l--~~~C~C~~i~~~~~~~~~q~~~~~~~~~~~~~~a~~LP~~C~v~-~~~-~ 88 (90)
T PF00234_consen 13 VRLSPCLPYLQGGCQQPSQQCCQQLRQL--DPQCRCEAIRQMVRQVIQQQQQGGQEMQIMAQRAQNLPSMCNVS-PPY-T 88 (90)
T ss_dssp SHHHGGHHHHTTSSSHHHHHHHHHHHHH--HHHHHHHHHHHHHHHSHHCTSTCSHHHHHHHHHHHHHHHHTTSS-SSS-S
T ss_pred ccccccHHHHhcccccchHHHhHHHHHH--hHHhhCHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHCCCC-CCC-C
Confidence 4588999999987657999999999999 8999999887543331 257889999999999999 554 5
Q ss_pred CC
Q 033430 112 KC 113 (119)
Q Consensus 112 ~C 113 (119)
+|
T Consensus 89 ~C 90 (90)
T PF00234_consen 89 DC 90 (90)
T ss_dssp -G
T ss_pred CC
Confidence 55
No 8
>cd01958 HPS_like HPS_like: Hydrophobic Protein from Soybean (HPS)-like subfamily; composed of proteins with similarity to HPS, a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins. In addition to HPS, members of this subfamily include a hybrid proline-rich protein (HyPRP) from maize, a dark-inducible protein (LeDI-2) from Lithospermum erythrorhizon, maize ZRP3 protein, and rice RcC3 protein. HyPRP is an embryo-specific protein that contains an N-terminal proline-rich domain and a C-terminal HPS-like cysteine-rich domain. It has been suggested that HyPRP may be involved in the stability and defense of the developing embryo. LeDI-2 is a root-specific protein that may be involved in regulating the biosynthesis of shikonin derivatives in L. erythrorhizon. Maize ZRP3 and rice RcC3 are root-specific proteins whose functions are yet to be determined. It has been reported that ZRP3 largely accumulates in a distinct subset
Probab=97.18 E-value=0.00056 Score=44.14 Aligned_cols=68 Identities=22% Similarity=0.566 Sum_probs=47.7
Q ss_pred cccccCHHHhhCC----CCCCCHHHHHHHHhhc--CCCCccceeccccccccCCCC--hH-HHhhhhhhcCCCCCCCCCC
Q 033430 42 LKLAPCAAAAQDE----KASVSASCCAQVKRIG--QNPICLCAVLLSDTAKASGVN--PQ-VAMSIPKRCNFANRPVGYK 112 (119)
Q Consensus 42 ~~L~pC~~yv~~~----~~~Ps~~CC~~vk~l~--~~~~ClC~~~~~~~~~~~~i~--~~-~a~~lP~~Cgv~~~p~g~~ 112 (119)
.+|.-|..-+-.. +.+|..+||+-++.+. .-..|+|..++.+ .+||+ .. +..-|-+.||.. .|.||+
T Consensus 9 lkLgvCanvL~l~~~~~g~~~~~~CC~ll~GL~dldAA~CLCtaikan---~lgi~~~~pv~l~llln~CGk~-~P~gf~ 84 (85)
T cd01958 9 LKLGVCANVLGLSLLLLGTPAVQPCCPLIGGLADLDAAVCLCTAIKAN---ILGISINIPVALSLLLNSCGRN-VPPGFT 84 (85)
T ss_pred HHhchhHhhhhccccccCCCccchHHHHHcCchhhheeeeeeeeeecc---ccCcccccChhHHHHHHHHcCc-CCCCCc
Confidence 5677787766321 2367789999999996 3356999988643 34543 33 344556789999 999999
Q ss_pred C
Q 033430 113 C 113 (119)
Q Consensus 113 C 113 (119)
|
T Consensus 85 C 85 (85)
T cd01958 85 C 85 (85)
T ss_pred C
Confidence 8
No 9
>PF14547 Hydrophob_seed: Hydrophobic seed protein
Probab=97.02 E-value=0.00021 Score=46.12 Aligned_cols=72 Identities=22% Similarity=0.494 Sum_probs=48.9
Q ss_pred cccccCHHHhh----CCCCCCCHHHHHHHHhhc--CCCCccceeccccccccCCCChH-HHhhhhhhcCCCCCCCCCCCC
Q 033430 42 LKLAPCAAAAQ----DEKASVSASCCAQVKRIG--QNPICLCAVLLSDTAKASGVNPQ-VAMSIPKRCNFANRPVGYKCG 114 (119)
Q Consensus 42 ~~L~pC~~yv~----~~~~~Ps~~CC~~vk~l~--~~~~ClC~~~~~~~~~~~~i~~~-~a~~lP~~Cgv~~~p~g~~C~ 114 (119)
.+|.-|.+.+- ..+.++...||+-++.+. .-..|||..++.......++|.. ....|-+.||.. .|.||+|.
T Consensus 7 lkLgvC~~vL~l~~~~~g~~~~~~CC~li~gL~d~~AA~CLC~aika~vlg~i~~~ipv~l~~lln~CGk~-~p~gf~C~ 85 (85)
T PF14547_consen 7 LKLGVCANVLGLVNLVIGNPPRQPCCSLIAGLADLDAAVCLCTAIKANVLGLINVNIPVALNLLLNACGKT-VPSGFTCP 85 (85)
T ss_pred hhhhhhhhhhhhhccccCCCCCCCcChHHhCcccchHHHHHHHHHhhhcccccccccccHHHHHHHHhCCc-CcCCCcCC
Confidence 57888888771 112357789999999996 22469998776432221223332 455678889999 89999993
No 10
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=89.42 E-value=0.34 Score=31.76 Aligned_cols=13 Identities=46% Similarity=0.360 Sum_probs=7.5
Q ss_pred cchhHHHHHHHHH
Q 033430 3 AASLKFICLVGLL 15 (119)
Q Consensus 3 M~~~~~~~~~~l~ 15 (119)
|++++|+.|++++
T Consensus 1 MaSK~~llL~l~L 13 (95)
T PF07172_consen 1 MASKAFLLLGLLL 13 (95)
T ss_pred CchhHHHHHHHHH
Confidence 6766666555443
No 11
>cd00261 AAI_SS AAI_SS: Alpha-Amylase Inhibitors (AAIs) and Seed Storage (SS) Protein subfamily; composed of cereal-type AAIs and SS proteins. They are mainly present in the seeds of a variety of plants. AAIs play an important role in the natural defenses of plants against insects and pathogens such as fungi, bacteria and viruses. AAIs impede the digestion of plant starch and proteins by inhibiting digestive alpha-amylases and proteinases. Also included in this subfamily are SS proteins such as 2S albumin, gamma-gliadin, napin, and prolamin. These AAIs and SS proteins are also known allergens in humans.
Probab=79.62 E-value=0.62 Score=30.60 Aligned_cols=62 Identities=23% Similarity=0.457 Sum_probs=41.5
Q ss_pred cccccCHHHhhCC---CCC-----------CCHHHHHHHHhhcCCCCccceeccccccc---cCC------------CCh
Q 033430 42 LKLAPCAAAAQDE---KAS-----------VSASCCAQVKRIGQNPICLCAVLLSDTAK---ASG------------VNP 92 (119)
Q Consensus 42 ~~L~pC~~yv~~~---~~~-----------Ps~~CC~~vk~l~~~~~ClC~~~~~~~~~---~~~------------i~~ 92 (119)
..|.+|..|+... ... ....||..++.+ +..|.|..+..-... ..+ .-.
T Consensus 13 ~~L~~C~~yl~qq~~~~~~~~~~~~~~~~~~~qqCCqqL~~i--~~qcrC~al~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (110)
T cd00261 13 QPLNSCREYLRQQCSGVGGPPVWPQQSCEVLRQQCCQQLAQI--PEQCRCEALRQMVQGVIQQQQQQQEQQQGQEVERMR 90 (110)
T ss_pred ccCcHHHHHHHHhccCCCCCCCcCccccHHHHHHHHHHHHhC--cHhhhHHHHHHHHHHHHHhhhccccccCcChHHHHH
Confidence 4688999998522 111 125699999998 788999987522111 000 124
Q ss_pred HHHhhhhhhcCCC
Q 033430 93 QVAMSIPKRCNFA 105 (119)
Q Consensus 93 ~~a~~lP~~Cgv~ 105 (119)
..|..||..||+.
T Consensus 91 ~~a~~Lp~~C~~~ 103 (110)
T cd00261 91 QAAQNLPSMCNLY 103 (110)
T ss_pred HHHHhhchhcCCC
Confidence 5789999999998
No 12
>PF05617 Prolamin_like: Prolamin-like; InterPro: IPR008502 This entry consists of several proteins of unknown function found exclusively in Arabidopsis thaliana.
Probab=52.50 E-value=16 Score=21.81 Aligned_cols=21 Identities=19% Similarity=0.649 Sum_probs=17.5
Q ss_pred CCCCHHHHHHHHhhcCCCCccce
Q 033430 56 ASVSASCCAQVKRIGQNPICLCA 78 (119)
Q Consensus 56 ~~Ps~~CC~~vk~l~~~~~ClC~ 78 (119)
...+++||.++.++ ...|.=.
T Consensus 26 ~~i~~~CC~~i~~~--g~~C~~~ 46 (70)
T PF05617_consen 26 KNIGPECCKAINKM--GKDCHPA 46 (70)
T ss_pred CCCChHHHHHHHHH--hHhHHHH
Confidence 57999999999998 6677665
No 13
>PF04202 Mfp-3: Foot protein 3; InterPro: IPR007328 Mytilus foot protein-3 (Mfp-3) is a highly polymorphic protein family located in the byssal adhesive plaques of blue mussels.
Probab=37.53 E-value=31 Score=21.21 Aligned_cols=19 Identities=26% Similarity=0.429 Sum_probs=10.2
Q ss_pred cchhHHHHHHHHHHHHHHh
Q 033430 3 AASLKFICLVGLLLVVNIA 21 (119)
Q Consensus 3 M~~~~~~~~~~l~~~~~~~ 21 (119)
|....+.+|++|+++-+++
T Consensus 1 mnn~Si~VLlaLvLIg~fA 19 (71)
T PF04202_consen 1 MNNLSIAVLLALVLIGSFA 19 (71)
T ss_pred CCchhHHHHHHHHHHhhhe
Confidence 4455555565656554443
No 14
>PF10868 DUF2667: Protein of unknown function (DUF2667); InterPro: IPR022618 This family of proteins with unknown function appears to be restricted to Arabidopsis thaliana.
Probab=22.73 E-value=42 Score=21.82 Aligned_cols=9 Identities=22% Similarity=0.966 Sum_probs=5.7
Q ss_pred CCCccceec
Q 033430 72 NPICLCAVL 80 (119)
Q Consensus 72 ~~~ClC~~~ 80 (119)
+..|.|-+.
T Consensus 72 ~~~C~Cc~~ 80 (90)
T PF10868_consen 72 DGVCYCCYY 80 (90)
T ss_pred CcEEEEecc
Confidence 466877654
Done!